# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj27181.fasta.nr -Q ../query/mKIAA4005.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4005, 818 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7911369 sequences Expectation_n fit: rho(ln(x))= 6.9455+/-0.000212; mu= 6.3778+/- 0.012 mean_var=156.2629+/-29.836, 0's: 38 Z-trim: 61 B-trim: 83 in 1/65 Lambda= 0.102600 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|81894326|sp|Q7JJ13.1|BRD2_MOUSE RecName: Full=B ( 798) 5264 791.5 0 gi|3273701|gb|AAC24810.1| female sterile homeotic- ( 798) 5244 788.6 0 gi|81872356|sp|Q6MGA9.1|BRD2_RAT RecName: Full=Bro ( 798) 5213 784.0 0 gi|108935958|sp|Q32S26.1|BRD2_BOVIN RecName: Full= ( 803) 5084 764.9 0 gi|114606772|ref|XP_001168005.1| PREDICTED: bromod ( 800) 5079 764.1 0 gi|15706263|emb|CAC69989.1| bromodomain containing ( 801) 5077 763.8 0 gi|147223324|emb|CAN13285.1| bromodomain containin ( 803) 5071 762.9 0 gi|109070687|ref|XP_001115845.1| PREDICTED: bromod ( 802) 5065 762.1 0 gi|62899715|sp|Q5TJG6.1|BRD2_CANFA RecName: Full=B ( 803) 5053 760.3 7e-217 gi|149732108|ref|XP_001496282.1| PREDICTED: simila ( 804) 5047 759.4 1.3e-216 gi|123229020|emb|CAM25760.1| bromodomain containin ( 806) 5036 757.8 4e-216 gi|168983750|emb|CAQ07149.1| bromodomain containin ( 806) 5032 757.2 6.1e-216 gi|2995269|emb|CAA15818.1| MMRING3.1.1 [Mus muscul ( 752) 4953 745.5 1.9e-212 gi|114606778|ref|XP_001167976.1| PREDICTED: bromod ( 839) 4851 730.4 7.3e-208 gi|126309678|ref|XP_001369391.1| PREDICTED: simila ( 801) 4843 729.2 1.6e-207 gi|109070691|ref|XP_001115832.1| PREDICTED: bromod ( 777) 4842 729.0 1.7e-207 gi|182769|gb|AAA68890.1| putative ( 754) 4782 720.1 8e-205 gi|114606788|ref|XP_001167666.1| PREDICTED: hypoth ( 753) 4780 719.8 9.8e-205 gi|1370115|emb|CAA65450.1| kinase [Homo sapiens] ( 754) 4778 719.6 1.2e-204 gi|52545923|emb|CAH56179.1| hypothetical protein [ ( 754) 4774 719.0 1.8e-204 gi|166851651|gb|ABY91321.1| RING3 [Sus scrofa] ( 756) 4767 717.9 3.7e-204 gi|67972378|dbj|BAE02531.1| unnamed protein produc ( 776) 4627 697.2 6.6e-198 gi|71067347|ref|NP_001020558.1| bromodomain contai ( 679) 4434 668.6 2.4e-189 gi|52545711|emb|CAH56208.1| hypothetical protein [ ( 681) 4268 644.0 6e-182 gi|109070701|ref|XP_001115839.1| PREDICTED: bromod ( 680) 4237 639.4 1.4e-180 gi|114606792|ref|XP_001167922.1| PREDICTED: hypoth ( 653) 4074 615.3 2.6e-173 gi|39645317|gb|AAH63840.1| BRD2 protein [Homo sapi ( 836) 3993 603.4 1.2e-169 gi|114606780|ref|XP_001167947.1| PREDICTED: bromod ( 835) 3991 603.1 1.5e-169 gi|168983749|emb|CAQ07148.1| bromodomain containin ( 836) 3983 601.9 3.5e-169 gi|168985443|emb|CAQ09472.1| bromodomain containin ( 648) 3973 600.3 8e-169 gi|109070693|ref|XP_001115820.1| PREDICTED: bromod ( 787) 3967 599.5 1.7e-168 gi|168985442|emb|CAQ09471.1| bromodomain containin ( 613) 3960 598.4 2.9e-168 gi|114606794|ref|XP_518902.2| PREDICTED: hypotheti ( 636) 3954 597.5 5.6e-168 gi|114606782|ref|XP_001167892.1| PREDICTED: bromod ( 785) 3947 596.6 1.3e-167 gi|114606776|ref|XP_001167858.1| PREDICTED: bromod ( 763) 3921 592.7 1.9e-166 gi|168985444|emb|CAQ09473.1| bromodomain containin ( 618) 3915 591.7 3e-166 gi|109070697|ref|XP_001115815.1| PREDICTED: bromod ( 779) 3904 590.2 1.1e-165 gi|2780775|dbj|BAA24377.1| Ring3 [Mus musculus] ( 549) 3680 556.9 8.1e-156 gi|133777453|gb|AAI14644.1| BRD2 protein [Bos taur ( 558) 3644 551.6 3.3e-154 gi|55725298|emb|CAH89514.1| hypothetical protein [ ( 546) 3589 543.4 9.2e-152 gi|12802525|gb|AAK07919.1|AF318183_1 ring 3 [Mus m ( 503) 3393 514.4 4.7e-143 gi|2780777|dbj|BAA24378.1| Ring3 [Mus musculus] ( 503) 3369 510.8 5.5e-142 gi|109070695|ref|XP_001115810.1| PREDICTED: bromod ( 784) 3319 503.6 1.3e-139 gi|114606784|ref|XP_001167828.1| PREDICTED: bromod ( 788) 3291 499.5 2.3e-138 gi|109070699|ref|XP_001115804.1| PREDICTED: bromod ( 747) 3290 499.3 2.4e-138 gi|114606786|ref|XP_001167802.1| PREDICTED: bromod ( 764) 3266 495.8 2.9e-137 gi|123233748|emb|CAM17899.1| bromodomain containin ( 473) 3221 488.9 2.1e-135 gi|74190894|dbj|BAE28228.1| unnamed protein produc ( 473) 3216 488.2 3.5e-135 gi|169730373|gb|ACA64774.1| bromodomain-containing ( 779) 3047 463.3 1.7e-127 gi|34392374|dbj|BAC82511.1| Serine threonine Kinas ( 735) 2884 439.2 2.9e-120 >>gi|81894326|sp|Q7JJ13.1|BRD2_MOUSE RecName: Full=Bromo (798 aa) initn: 5264 init1: 5264 opt: 5264 Z-score: 4218.8 bits: 791.5 E(): 0 Smith-Waterman score: 5264; 99.875% identity (99.875% similar) in 798 aa overlap (21-818:1-798) 10 20 30 40 50 60 mKIAA4 GEPRLPGLHAAERRRFPEVKMLQNVTPHKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLYE :::::::::::::::::::::::::::::::::::::::: gi|818 MLQNVTPHKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLYE 10 20 30 40 70 80 90 100 110 120 mKIAA4 GFESPTMASVPALQLAPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 GFESPTMASVPALQLAPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQ 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 PVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 PVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDD 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 IVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 IVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSSV 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 SHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVKR 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 KADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 KADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQSS 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 KKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKR 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 KMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 KMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPG 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 PLPVSTALPPGLTKSSSESSSEESSSESSSEEEEEEEEDEDEEESESSDSEEERAHRLAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 PLPVSTALPPGLTKSSSESSSEESSSESSSEEEEEEEEDEDEEESESSDSEEERAHRLAE 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 LQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRIGIDEDDKGPRAPRPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 LQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRIGIDEDDKGPRAPRPP 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 QPKKSKKAGGGGSNATTLSHPGFGTSGGSSNKLPKKSQKTAPPVLPTGYDSEEEEESRPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 QPKKSKKAGGGGSNATTLSHPGFGTSGGSSNKLPKKSQKTAPPVLPTGYDSEEEEESRPM 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA4 SYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKLSTLRELERY :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|818 SYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERY 650 660 670 680 690 700 730 740 750 760 770 780 mKIAA4 VLSCLRKKPRKPYTIRKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 VLSCLRKKPRKPYTIRKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKTE 710 720 730 740 750 760 790 800 810 mKIAA4 SSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG :::::::::::::::::::::::::::::::::::::: gi|818 SSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG 770 780 790 >>gi|3273701|gb|AAC24810.1| female sterile homeotic-rela (798 aa) initn: 5244 init1: 5244 opt: 5244 Z-score: 4202.8 bits: 788.6 E(): 0 Smith-Waterman score: 5244; 99.499% identity (99.624% similar) in 798 aa overlap (21-818:1-798) 10 20 30 40 50 60 mKIAA4 GEPRLPGLHAAERRRFPEVKMLQNVTPHKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLYE :::::::::::::::::::::::::::::::::::::::: gi|327 MLQNVTPHKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLYE 10 20 30 40 70 80 90 100 110 120 mKIAA4 GFESPTMASVPALQLAPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|327 GFESPTMASVPALQLAPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQ 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 PVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|327 PVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDD 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 IVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSSV ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|327 IVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGGKLAALQGSITSAHQVPAVSSV 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 SHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|327 SHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVKR 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 KADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|327 KADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQSS 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|327 KKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKR 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 KMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|327 KMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPG 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 PLPVSTALPPGLTKSSSESSSEESSSESSSEEEEEEEEDEDEEESESSDSEEERAHRLAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|327 PLPVSTALPPGLTKSSSESSSEESSSESSSEEEEEEEEDEDEEESESSDSEEERAHRLAE 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 LQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRIGIDEDDKGPRAPRPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|327 LQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRIGIDEDDKGPRAPRPP 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 QPKKSKKAGGGGSNATTLSHPGFGTSGGSSNKLPKKSQKTAPPVLPTGYDSEEEEESRPM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|327 QPKKSKKAGGGGSNATTLSHPGFGTSGGSSNKLPKKSQKTAPPVLPTGYDSEEEEESRPM 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA4 SYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKLSTLRELERY :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|327 SYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERY 650 660 670 680 690 700 730 740 750 760 770 780 mKIAA4 VLSCLRKKPRKPYTIRKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|327 VLSCLRKKPRKPYTIRKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKTE 710 720 730 740 750 760 790 800 810 mKIAA4 SSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG :::: : ::::::::::::::::::::::::::::::: gi|327 SSAQLVPVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG 770 780 790 >>gi|81872356|sp|Q6MGA9.1|BRD2_RAT RecName: Full=Bromodo (798 aa) initn: 5213 init1: 5213 opt: 5213 Z-score: 4178.0 bits: 784.0 E(): 0 Smith-Waterman score: 5213; 98.872% identity (99.749% similar) in 798 aa overlap (21-818:1-798) 10 20 30 40 50 60 mKIAA4 GEPRLPGLHAAERRRFPEVKMLQNVTPHKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLYE :::::::::::::::::::::::::::::::::::::::: gi|818 MLQNVTPHKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLYE 10 20 30 40 70 80 90 100 110 120 mKIAA4 GFESPTMASVPALQLAPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 GFESPTMASVPALQLAPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQ 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA4 PVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 PVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDD 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA4 IVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 IVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSSV 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA4 SHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVKR 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA4 KADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 KADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQSS 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA4 KKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 KKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKR 350 360 370 380 390 400 430 440 450 460 470 480 mKIAA4 KMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 KMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEPG 410 420 430 440 450 460 490 500 510 520 530 540 mKIAA4 PLPVSTALPPGLTKSSSESSSEESSSESSSEEEEEEEEDEDEEESESSDSEEERAHRLAE ::::::::::::.:::::::::::::::::::::::.:...::::::::::::::::::: gi|818 PLPVSTALPPGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEESESSDSEEERAHRLAE 470 480 490 500 510 520 550 560 570 580 590 600 mKIAA4 LQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRIGIDEDDKGPRAPRPP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 LQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRIGIDEDDKGPRAPRPL 530 540 550 560 570 580 610 620 630 640 650 660 mKIAA4 QPKKSKKAGGGGSNATTLSHPGFGTSGGSSNKLPKKSQKTAPPVLPTGYDSEEEEESRPM ::::::::::::::::::::::::::.:::::::::.::::::::::::::::::::::: gi|818 QPKKSKKAGGGGSNATTLSHPGFGTSAGSSNKLPKKAQKTAPPVLPTGYDSEEEEESRPM 590 600 610 620 630 640 670 680 690 700 710 720 mKIAA4 SYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKLSTLRELERY :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|818 SYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELERY 650 660 670 680 690 700 730 740 750 760 770 780 mKIAA4 VLSCLRKKPRKPYTIRKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 VLSCLRKKPRKPYTIRKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKTE 710 720 730 740 750 760 790 800 810 mKIAA4 SSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG :::::::::::::::::::::::::::::::::::::: gi|818 SSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG 770 780 790 >>gi|108935958|sp|Q32S26.1|BRD2_BOVIN RecName: Full=Brom (803 aa) initn: 4540 init1: 3379 opt: 5084 Z-score: 4074.8 bits: 764.9 E(): 0 Smith-Waterman score: 5084; 96.513% identity (98.506% similar) in 803 aa overlap (21-818:1-803) 10 20 30 40 50 mKIAA4 GEPRLPGLHAAERRRFPEVKMLQNVTPH-KLPGEGNAGLLGLGPEAAAPGKRIRKPSLLY :::::::: ::::::::::::::::::::::::::::::: gi|108 MLQNVTPHNKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLY 10 20 30 40 60 70 80 90 100 110 mKIAA4 EGFESPTMASVPALQLAPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFR ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|108 EGFESPTMASVPALQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFR 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA4 QPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 QPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA4 DIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 DIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSS 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA4 VSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 VSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVK 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA4 RKADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQS ::::::::::::::::::::::::.::::::::::.:::::::::::::::::::::::: gi|108 RKADTTTPTPTAILAPGSPASPPGGLEPKAARLPPVRRESGRPIKPPRKDLPDSQQQHQS 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA4 SKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 SKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVK 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA4 RKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 RKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEP 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA4 GPLPVSTALPPGLTKSSSESSSEESSSESSSEEEEEEEEDEDEEE--SESSDSEEERAHR :::::::::::::.:::::::::::::::::::::::.:::.::: ::::::::::::: gi|108 GPLPVSTALPPGLAKSSSESSSEESSSESSSEEEEEEDEDEEEEEEESESSDSEEERAHR 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA4 LAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRIGIDEDDKGPRAP ::::::::::::::::::::::::::::::::::::::::::::::: : :::::::::: gi|108 LAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRAGADEDDKGPRAP 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA4 RPPQPKKSKKAGGGGSN-ATTLSHPGFGTSGGSSNKLPKKSQKTAPPVLPTGYDSEEEEE :: :::::::::::::. :.::. :::: :::...:::::. :::::.::.::::::::: gi|108 RPSQPKKSKKAGGGGSSGAATLGPPGFGPSGGGATKLPKKATKTAPPALPAGYDSEEEEE 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA4 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKLSTLRE :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|108 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRE 650 660 670 680 690 700 720 730 740 750 760 770 mKIAA4 LERYVLSCLRKKPRKPYTIRKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKAS :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|108 LERYVLSCLRKKPRKPYTIKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKAS 710 720 730 740 750 760 780 790 800 810 mKIAA4 EKTE-SSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG :::: :::::::::::::::::::::::::::::::::::::: gi|108 EKTETSSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG 770 780 790 800 >>gi|114606772|ref|XP_001168005.1| PREDICTED: bromodomai (800 aa) initn: 5560 init1: 4914 opt: 5079 Z-score: 4070.8 bits: 764.1 E(): 0 Smith-Waterman score: 5079; 96.000% identity (98.875% similar) in 800 aa overlap (21-818:1-800) 10 20 30 40 50 mKIAA4 GEPRLPGLHAAERRRFPEVKMLQNVTPH-KLPGEGNAGLLGLGPEAAAPGKRIRKPSLLY :::::::: ::::::::::::::::::::::::::::::: gi|114 MLQNVTPHNKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLY 10 20 30 40 60 70 80 90 100 110 mKIAA4 EGFESPTMASVPALQLAPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFR ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|114 EGFESPTMASVPALQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFR 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA4 QPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA4 DIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSS ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|114 DIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSVTSAHQVPAVSS 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA4 VSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVK ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|114 VSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVTAAPPAQPLAKKKGVK 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA4 RKADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RKADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQS 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA4 SKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVK 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA4 RKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEP 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA4 GPLPVSTALPPGLTKSSSESSSEESSSESSSEEEEEEEEDEDEEESESSDSEEERAHRLA ::::::::.::::.:::::::::::::::::::::::.:::.::.::::::::::::::: gi|114 GPLPVSTAMPPGLAKSSSESSSEESSSESSSEEEEEEDEDEEEEDSESSDSEEERAHRLA 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA4 ELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRIGIDEDDKGPRAPRP ::::::::::::::::::::::::::::::::::::::::::::: : .::::::::::: gi|114 ELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRAGAEEDDKGPRAPRP 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA4 PQPKKSKKAGGGGSNATTLSHPGFGTSGGSSNKLPKKSQKTAPPVLPTGYDSEEEEESRP :::::::::.:.:.....:. ::: ::::..:::::. :::::.::::::::::::::: gi|114 PQPKKSKKASGSGGGSAALGPSGFGPSGGSGTKLPKKATKTAPPALPTGYDSEEEEESRP 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA4 MSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKLSTLRELER ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|114 MSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELER 650 660 670 680 690 700 720 730 740 750 760 770 mKIAA4 YVLSCLRKKPRKPYTIRKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEKT ::::::::::::::::.:::::::::::::::::::::::::::::::::::::::.::: gi|114 YVLSCLRKKPRKPYTIKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKANEKT 710 720 730 740 750 760 780 790 800 810 mKIAA4 ESS-AQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG ::: :::::::::::::::::::::::::::::::::::: gi|114 ESSSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG 770 780 790 800 >>gi|15706263|emb|CAC69989.1| bromodomain containing 2 [ (801 aa) initn: 5052 init1: 3342 opt: 5077 Z-score: 4069.2 bits: 763.8 E(): 0 Smith-Waterman score: 5077; 96.130% identity (98.752% similar) in 801 aa overlap (21-818:1-801) 10 20 30 40 50 mKIAA4 GEPRLPGLHAAERRRFPEVKMLQNVTPH-KLPGEGNAGLLGLGPEAAAPGKRIRKPSLLY :::::::: ::::::::::::::::::::::::::::::: gi|157 MLQNVTPHNKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLY 10 20 30 40 60 70 80 90 100 110 mKIAA4 EGFESPTMASVPALQLAPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFR ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|157 EGFESPTMASVPALQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFR 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA4 QPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 QPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA4 DIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSS ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|157 DIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSVTSAHQVPAVSS 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA4 VSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVK :::::::::::::::::.::::::::::::::::::::::::::.::::::::::::::: gi|157 VSHTALYTPPPEIPTTVFNIPHPSVISSPLLKSLHSAGPPLLAVTAAPPAQPLAKKKGVK 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA4 RKADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 RKADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQS 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA4 SKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 SKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVK 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA4 RKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 RKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEP 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA4 GPLPVSTALPPGLTKSSSESSSEESSSESSSEEEEEE-EEDEDEEESESSDSEEERAHRL ::::::::.::::.::::::::::::::::::::::: ::::.::::::::::::::::: gi|157 GPLPVSTAMPPGLAKSSSESSSEESSSESSSEEEEEEDEEDEEEEESESSDSEEERAHRL 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA4 AELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRIGIDEDDKGPRAPR :::::::::::::::::::::::::::::::::::::::::::::: : ::::::::::: gi|157 AELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRAGADEDDKGPRAPR 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA4 PPQPKKSKKAGGGGSNATTLSHPGFGTSGGSSNKLPKKSQKTAPPVLPTGYDSEEEEESR ::::::::::.:.:.....:. ::: ::::..:::::. :::::.:::::::::::::: gi|157 PPQPKKSKKASGSGGGSAALGPSGFGPSGGSGTKLPKKATKTAPPALPTGYDSEEEEESR 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA4 PMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKLSTLRELE :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|157 PMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRELE 650 660 670 680 690 700 720 730 740 750 760 770 mKIAA4 RYVLSCLRKKPRKPYTIRKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASEK :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::.:: gi|157 RYVLSCLRKKPRKPYTIKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKANEK 710 720 730 740 750 760 780 790 800 810 mKIAA4 TESS-AQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG :::: :::::::::::::::::::::::::::::::::::: gi|157 TESSSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG 770 780 790 800 >>gi|147223324|emb|CAN13285.1| bromodomain containing 2 (803 aa) initn: 4546 init1: 3372 opt: 5071 Z-score: 4064.4 bits: 762.9 E(): 0 Smith-Waterman score: 5071; 96.389% identity (98.506% similar) in 803 aa overlap (21-818:1-803) 10 20 30 40 50 mKIAA4 GEPRLPGLHAAERRRFPEVKMLQNVTPH-KLPGEGNAGLLGLGPEAAAPGKRIRKPSLLY :::::::: ::::::::::::::::::::::::::::::: gi|147 MLQNVTPHSKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLY 10 20 30 40 60 70 80 90 100 110 mKIAA4 EGFESPTMASVPALQLAPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFR ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|147 EGFESPTMASVPALQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFR 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA4 QPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 QPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA4 DIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 DIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSS 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA4 VSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVK ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 VSHTTLYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVK 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA4 RKADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQS ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|147 RKADTTTPTPTAILAPGSPASPPGGLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQS 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA4 SKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 SKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVK 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA4 RKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|147 RKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEP 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA4 GPLPVSTALPPGLTKSSSESSSEESSSESSSEEEEEE--EEDEDEEESESSDSEEERAHR :::::::::::::.::::::::::::::::::::::: ::.:.:::::::::::::::: gi|147 GPLPVSTALPPGLAKSSSESSSEESSSESSSEEEEEEDEEEEEEEEESESSDSEEERAHR 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA4 LAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRIGIDEDDKGPRAP ::::::::::::::::::::::::::::::::::::::::::::::: : :::::::::: gi|147 LAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRAGGDEDDKGPRAP 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA4 RPPQPKKSKKAGG-GGSNATTLSHPGFGTSGGSSNKLPKKSQKTAPPVLPTGYDSEEEEE :: ::::::::.: ::..:.::. :::: ::::..:::::. :::::.::.::::::::: gi|147 RPSQPKKSKKASGSGGGSAATLGPPGFGPSGGSGTKLPKKATKTAPPTLPAGYDSEEEEE 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA4 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKLSTLRE :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|147 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRE 650 660 670 680 690 700 720 730 740 750 760 770 mKIAA4 LERYVLSCLRKKPRKPYTIRKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKAS :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|147 LERYVLSCLRKKPRKPYTIKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKAS 710 720 730 740 750 760 780 790 800 810 mKIAA4 EKTE-SSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG :::: :::::::::::::::::::::::::::::::::::::: gi|147 EKTETSSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG 770 780 790 800 >>gi|109070687|ref|XP_001115845.1| PREDICTED: bromodomai (802 aa) initn: 5022 init1: 3370 opt: 5065 Z-score: 4059.6 bits: 762.1 E(): 0 Smith-Waterman score: 5065; 95.761% identity (98.628% similar) in 802 aa overlap (21-818:1-802) 10 20 30 40 50 mKIAA4 GEPRLPGLHAAERRRFPEVKMLQNVTPH-KLPGEGNAGLLGLGPEAAAPGKRIRKPSLLY :::::::: ::::::::::::::::::::::::::::::: gi|109 MLQNVTPHNKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLY 10 20 30 40 60 70 80 90 100 110 mKIAA4 EGFESPTMASVPALQLAPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFR ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|109 EGFESPTMASVPALQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFR 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA4 QPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA4 DIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSS ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|109 DIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSVTSAHQVPAVSS 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA4 VSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVK :::.::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|109 VSHAALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVTAAPPAQPLAKKKGVK 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA4 RKADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RKADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQS 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA4 SKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVK 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA4 RKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEP 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA4 GPLPVSTALPPGLTKSSSESSSEESSSESSSEEEEEEEED--EDEEESESSDSEEERAHR ::::::::.::::.:::::::::::::::::::::::.:: :.:::::::::::::::: gi|109 GPLPVSTAMPPGLAKSSSESSSEESSSESSSEEEEEEDEDDEEEEEESESSDSEEERAHR 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA4 LAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRIGIDEDDKGPRAP ::::::::::::::::::::::::::::::::::::::::::::::: : :::::::::: gi|109 LAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRAGADEDDKGPRAP 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA4 RPPQPKKSKKAGGGGSNATTLSHPGFGTSGGSSNKLPKKSQKTAPPVLPTGYDSEEEEES :::::::::::.:.:.....:. ::: ::::..:::::. :::::.::::::::::::: gi|109 RPPQPKKSKKASGSGGGSAALGPSGFGPSGGSGTKLPKKATKTAPPALPTGYDSEEEEES 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA4 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKLSTLREL ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|109 RPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLREL 650 660 670 680 690 700 720 730 740 750 760 770 mKIAA4 ERYVLSCLRKKPRKPYTIRKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKASE ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::..: gi|109 ERYVLSCLRKKPRKPYTIKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKVNE 710 720 730 740 750 760 780 790 800 810 mKIAA4 KTESS-AQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG ::::: :::::::::::::::::::::::::::::::::::: gi|109 KTESSSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG 770 780 790 800 >>gi|62899715|sp|Q5TJG6.1|BRD2_CANFA RecName: Full=Bromo (803 aa) initn: 4527 init1: 3354 opt: 5053 Z-score: 4050.0 bits: 760.3 E(): 7e-217 Smith-Waterman score: 5053; 96.139% identity (98.257% similar) in 803 aa overlap (21-818:1-803) 10 20 30 40 50 mKIAA4 GEPRLPGLHAAERRRFPEVKMLQNVTPH-KLPGEGNAGLLGLGPEAAAPGKRIRKPSLLY :::::::: ::::::::::::::::::::::::::::::: gi|628 MLQNVTPHSKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLY 10 20 30 40 60 70 80 90 100 110 mKIAA4 EGFESPTMASVPALQLAPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFR ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|628 EGFESPTMASVPALQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFR 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA4 QPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 QPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA4 DIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 DIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSS 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA4 VSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVK ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|628 VSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPQLLAVSAAPPAQPLAKKKGVK 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA4 RKADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQS ::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: gi|628 RKADTTTPTPTAILAPGSPASPPGSLEAKAARLPPMRRESGRPIKPPRKDLPDSQQQHQS 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA4 SKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 SKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVK 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA4 RKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 RKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEP 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA4 GPLPVSTALPPGLTKSSSESSSEESSSESSSEEEEEE--EEDEDEEESESSDSEEERAHR :::::::::::::.:::::::::::::::::::.::: ::.:.:::::::::::::::: gi|628 GPLPVSTALPPGLAKSSSESSSEESSSESSSEEDEEEDEEEEEEEEESESSDSEEERAHR 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA4 LAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRIGIDEDDKGPRAP ::::::::::::::::::::::::::::::::::::::::::::::: :.:::::: ::: gi|628 LAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRAGVDEDDKGSRAP 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA4 RPPQPKKSKKAGG-GGSNATTLSHPGFGTSGGSSNKLPKKSQKTAPPVLPTGYDSEEEEE :: ::::::::.: ::..:.::. :::: ::::..:::::. :::::.:::::::::::: gi|628 RPSQPKKSKKASGSGGGSAATLGPPGFGPSGGSGTKLPKKATKTAPPALPTGYDSEEEEE 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA4 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKLSTLRE :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|628 SRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLRE 650 660 670 680 690 700 720 730 740 750 760 770 mKIAA4 LERYVLSCLRKKPRKPYTIRKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKAS :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|628 LERYVLSCLRKKPRKPYTIKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKAS 710 720 730 740 750 760 780 790 800 810 mKIAA4 EKTESSA-QQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG ::::::. ::::::::::::::::::::::::::::::::::: gi|628 EKTESSSTQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG 770 780 790 800 >>gi|149732108|ref|XP_001496282.1| PREDICTED: similar to (804 aa) initn: 5537 init1: 3390 opt: 5047 Z-score: 4045.2 bits: 759.4 E(): 1.3e-216 Smith-Waterman score: 5047; 96.020% identity (98.259% similar) in 804 aa overlap (21-818:1-804) 10 20 30 40 50 mKIAA4 GEPRLPGLHAAERRRFPEVKMLQNVTPH-KLPGEGNAGLLGLGPEAAAPGKRIRKPSLLY :::::::: ::::::::::::::::::::::::::::::: gi|149 MLQNVTPHNKLPGEGNAGLLGLGPEAAAPGKRIRKPSLLY 10 20 30 40 60 70 80 90 100 110 mKIAA4 EGFESPTMASVPALQLAPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFR ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|149 EGFESPTMASVPALQLTPANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFR 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA4 QPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QPVDAVKLGLPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTD 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA4 DIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DIVLMAQTLEKIFLQKVASMPQEEQELVVTIPKNSHKKGAKLAALQGSITSAHQVPAVSS 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA4 VSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VSHTALYTPPPEIPTTVLNIPHPSVISSPLLKSLHSAGPPLLAVSAAPPAQPLAKKKGVK 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA4 RKADTTTPTPTAILAPGSPASPPGSLEPKAARLPPMRRESGRPIKPPRKDLPDSQQQHQS ::::::::::::::::::::::::.:::::::::: :::::::::::::::::::::::: gi|149 RKADTTTPTPTAILAPGSPASPPGGLEPKAARLPPTRRESGRPIKPPRKDLPDSQQQHQS 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA4 SKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVK 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA4 RKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPLEP 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA4 GPLPVSTALPPGLTKSSSESSSEESSSESSSEEEEEE--EEDEDEEESESSDSEEERAHR :::::::::::::.:::::::::::::::::::::.: ::.:.:::::::::::::::: gi|149 GPLPVSTALPPGLAKSSSESSSEESSSESSSEEEEDEDEEEEEEEEESESSDSEEERAHR 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA4 LAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRIGIDEDDKGPRAP ::::::::::::::::::::::::::::::::::::::::::::::: :.:::::::::: gi|149 LAELQEQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKHRGRAGVDEDDKGPRAP 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA4 RPPQPKKSKKAGGGGS-NATTLSHPGFG-TSGGSSNKLPKKSQKTAPPVLPTGYDSEEEE :: ::::::::.: :: .:..:. ::: .::::..:::::. :::::.::::::::::: gi|149 RPSQPKKSKKASGTGSGSAAALGPAGFGPSSGGSGTKLPKKATKTAPPALPTGYDSEEEE 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA4 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKLSTLR ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|149 ESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQAREPSLRDSNPEEIEIDFETLKPSTLR 650 660 670 680 690 700 720 730 740 750 760 770 mKIAA4 ELERYVLSCLRKKPRKPYTIRKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKA ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|149 ELERYVLSCLRKKPRKPYTIKKPVGKTKEELALEKKRELEKRLQDVSGQLNSTKKPPKKA 710 720 730 740 750 760 780 790 800 810 mKIAA4 SEKTESS-AQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG ::::::: :::::::::::::::::::::::::::::::::::: gi|149 SEKTESSSAQQVAVSRLSASSSSSDSSSSSSSSSSSDTSDSDSG 770 780 790 800 818 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 00:57:13 2009 done: Tue Mar 17 01:05:45 2009 Total Scan time: 1123.350 Total Display time: 0.380 Function used was FASTA [version 34.26.5 April 26, 2007]