# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj26301.fasta.nr -Q ../query/mFLJ00285.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mFLJ00285, 838 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7920194 sequences
Expectation_n fit: rho(ln(x))= 5.1704+/-0.000183; mu= 12.9115+/- 0.010
mean_var=71.1557+/-13.925, 0's: 25 Z-trim: 32 B-trim: 0 in 0/65
Lambda= 0.152044
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 38, opt: 26, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|60360024|dbj|BAD90231.1| mFLJ00285 protein [Mus ( 838) 5492 1214.5 0
gi|81861038|sp|O08852.1|PKD1_MOUSE RecName: Full=P (4293) 5373 1188.9 0
gi|148690393|gb|EDL22340.1| polycystic kidney dise (4293) 5366 1187.3 0
gi|124487380|ref|NP_038658.2| polycystin 1 [Mus mu (4293) 5357 1185.4 0
gi|149052028|gb|EDM03845.1| rCG34128 [Rattus norve (3865) 5024 1112.3 0
gi|11320978|gb|AAG33986.1| Pkd1 [Rattus norvegicus (4283) 5004 1107.9 0
gi|1586345|prf||2203412A polycystin (4302) 4193 930.0 0
gi|903758|gb|AAC41765.1| polycystic kidney disease (4292) 4190 929.4 0
gi|904223|gb|AAC37576.1| polycystic kidney disease (4302) 4190 929.4 0
gi|45645177|sp|P98161.2|PKD1_HUMAN RecName: Full=P (4303) 4190 929.4 0
gi|109127236|ref|XP_001083558.1| PREDICTED: polycy (3209) 4188 928.9 0
gi|119605961|gb|EAW85555.1| polycystic kidney dise (2635) 4182 927.5 0
gi|799335|gb|AAC50128.1| autosomal dominant polycy (4303) 4183 927.8 0
gi|119605960|gb|EAW85554.1| polycystic kidney dise (4302) 4182 927.6 0
gi|119605959|gb|EAW85553.1| polycystic kidney dise (4303) 4182 927.6 0
gi|194219363|ref|XP_001915208.1| PREDICTED: simila (4194) 4144 919.3 0
gi|20514243|gb|AAM22956.1| polycystin-1 [Canis fam (4256) 4101 909.9 0
gi|31321927|gb|AAM45378.1| polycystin 1; polycysti (4311) 4093 908.1 0
gi|126335532|ref|XP_001366936.1| PREDICTED: simila (4381) 3659 812.9 0
gi|118097923|ref|XP_414854.2| PREDICTED: similar t (4345) 2945 656.3 7.9e-185
gi|50512168|gb|AAT77543.1| polycystic kidney disea (3434) 2620 584.9 1.9e-163
gi|790819|gb|AAB59488.1| polycystic kidney disease (3638) 1813 407.9 3.8e-110
gi|47223874|emb|CAG06051.1| unnamed protein produc (3779) 1791 403.1 1.1e-108
gi|209837720|dbj|BAG75152.1| polycystin 1 [Oryzias (4596) 1729 389.6 1.6e-104
gi|2627436|gb|AAB86683.1| unknown [Takifugu rubrip (4578) 1687 380.4 9.6e-102
gi|62088930|dbj|BAD92912.1| polycystin 1 isoform 2 ( 967) 1318 298.9 6.6e-78
gi|210130658|gb|EEA78329.1| hypothetical protein B (4526) 1113 254.4 7.6e-64
gi|194388380|dbj|BAG65574.1| unnamed protein produ ( 604) 576 136.0 4.5e-29
gi|88189535|gb|ABD42532.1| PKD [Methanospirillum h ( 963) 516 123.0 5.9e-25
gi|62087630|dbj|BAD92262.1| Polycystin 1 precursor (1180) 503 120.2 5e-24
gi|72398061|gb|AAZ72334.1| conserved hypothetical (1667) 497 119.0 1.6e-23
gi|219545043|gb|ACL15493.1| PKD domain containing (1667) 462 111.3 3.4e-21
gi|219546300|gb|ACL16750.1| NHL repeat containing ( 930) 450 108.5 1.3e-20
gi|153998848|gb|ABS55271.1| PKD domain containing ( 528) 428 103.5 2.4e-19
gi|196200715|gb|EDX95535.1| YD repeat protein [Cya (5529) 428 104.3 1.5e-18
gi|19914667|gb|AAM04289.1| cell surface protein [M (2275) 416 101.3 4.7e-18
gi|72395514|gb|AAZ69787.1| putative surface layer (1094) 408 99.4 8.9e-18
gi|219546917|gb|ACL17367.1| Carbohydrate binding f (1356) 381 93.5 6.4e-16
gi|219547484|gb|ACL17934.1| PKD domain containing (1387) 381 93.5 6.5e-16
gi|88187915|gb|ABD40912.1| PKD [Methanospirillum h (1011) 363 89.5 7.8e-15
gi|189526366|ref|XP_694060.3| PREDICTED: similar t (2908) 356 88.3 5.2e-14
gi|222454126|gb|ACM58390.1| PKD domain containing ( 734) 346 85.6 8.1e-14
gi|125862644|gb|ABN57833.1| PKD domain containing ( 910) 339 84.2 2.8e-13
gi|72396162|gb|AAZ70435.1| cell surface protein [M ( 669) 324 80.8 2.1e-12
gi|72396157|gb|AAZ70430.1| cell surface protein [M ( 679) 320 79.9 4e-12
gi|72395429|gb|AAZ69702.1| cell surface protein [M ( 713) 318 79.5 5.6e-12
gi|72396161|gb|AAZ70434.1| cell surface protein [M ( 675) 309 77.5 2.1e-11
gi|19914112|gb|AAM03789.1| cell surface protein [M ( 883) 309 77.6 2.6e-11
gi|72395513|gb|AAZ69786.1| surface layer protein B ( 735) 305 76.7 4.1e-11
gi|72396156|gb|AAZ70429.1| cell surface protein [M ( 658) 302 76.0 6e-11
>>gi|60360024|dbj|BAD90231.1| mFLJ00285 protein [Mus mus (838 aa)
initn: 5492 init1: 5492 opt: 5492 Z-score: 6504.1 bits: 1214.5 E(): 0
Smith-Waterman score: 5492; 100.000% identity (100.000% similar) in 838 aa overlap (1-838:1-838)
10 20 30 40 50 60
mFLJ00 YTRVLPSSSSRTLLQLWLTASNHVSNITVNYNVTVERMNKMHGLWVSAVPTVLPPNATLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 YTRVLPSSSSRTLLQLWLTASNHVSNITVNYNVTVERMNKMHGLWVSAVPTVLPPNATLA
10 20 30 40 50 60
70 80 90 100 110 120
mFLJ00 LTGGVLVDSAVEVAFLWNFGDGEQVLRQFKPPYDESFQVPDPTVAQVLVEHNTTHIYTTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 LTGGVLVDSAVEVAFLWNFGDGEQVLRQFKPPYDESFQVPDPTVAQVLVEHNTTHIYTTP
70 80 90 100 110 120
130 140 150 160 170 180
mFLJ00 GEYNLTVLVSNTYENLTQQVTVSVRTVLPNVAIGMSSNVLVAGQPITFSPYPLPSTDGVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 GEYNLTVLVSNTYENLTQQVTVSVRTVLPNVAIGMSSNVLVAGQPITFSPYPLPSTDGVL
130 140 150 160 170 180
190 200 210 220 230 240
mFLJ00 YTWDFGDGSPVLIQSQPVLNHTYSMTGTYRITLEVNNTVSSVTAHADIRVFQELHGLTVY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 YTWDFGDGSPVLIQSQPVLNHTYSMTGTYRITLEVNNTVSSVTAHADIRVFQELHGLTVY
190 200 210 220 230 240
250 260 270 280 290 300
mFLJ00 LSPSVEQGAPMVVSASVESGDNITWTFDMGDGTVFTGPEATVQHVYLRAQNFTVTVEAAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 LSPSVEQGAPMVVSASVESGDNITWTFDMGDGTVFTGPEATVQHVYLRAQNFTVTVEAAN
250 260 270 280 290 300
310 320 330 340 350 360
mFLJ00 PAGHLSQSLHVQVFVLEVLRIEPSTCIPTQPSAQLMAHVTGDPVHYLFDWTFGDGSSNVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 PAGHLSQSLHVQVFVLEVLRIEPSTCIPTQPSAQLMAHVTGDPVHYLFDWTFGDGSSNVT
310 320 330 340 350 360
370 380 390 400 410 420
mFLJ00 VHGHPSVTHNFTRSGIFPLALVLSSHVNKAHYFTSICVEPEIRNITLQPERQFVKLGDEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 VHGHPSVTHNFTRSGIFPLALVLSSHVNKAHYFTSICVEPEIRNITLQPERQFVKLGDEA
370 380 390 400 410 420
430 440 450 460 470 480
mFLJ00 RLVAYSWPPFPYRYTWDFGTEDTTHTQTGGSEVKFIYREPGSYLVIVTVSNNISSTNDSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 RLVAYSWPPFPYRYTWDFGTEDTTHTQTGGSEVKFIYREPGSYLVIVTVSNNISSTNDSA
430 440 450 460 470 480
490 500 510 520 530 540
mFLJ00 FVEVQEPVLVTGIRINGSHVLELQQPYLLSAMGSGSPATYLWELGDGSQSEGPEVTHIYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 FVEVQEPVLVTGIRINGSHVLELQQPYLLSAMGSGSPATYLWELGDGSQSEGPEVTHIYS
490 500 510 520 530 540
550 560 570 580 590 600
mFLJ00 STGDFTVRVSGWNEVSRSEAQLNITVKQRVRGLTINASRTVVPLNGSVSFSTLLEVGSDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 STGDFTVRVSGWNEVSRSEAQLNITVKQRVRGLTINASRTVVPLNGSVSFSTLLEVGSDV
550 560 570 580 590 600
610 620 630 640 650 660
mFLJ00 HYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEVGSAQDSIFIYVLQFIEGLQVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 HYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEVGSAQDSIFIYVLQFIEGLQVA
610 620 630 640 650 660
670 680 690 700 710 720
mFLJ00 GGDNGCCFPTNYTLQLQAAVRDGTNISYSWTAQQEGSLITLFGSGKCFSLTALKASTYYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 GGDNGCCFPTNYTLQLQAAVRDGTNISYSWTAQQEGSLITLFGSGKCFSLTALKASTYYV
670 680 690 700 710 720
730 740 750 760 770 780
mFLJ00 HLRATNMLGSAAANRTIDFVEPVESLILSASPNPAAVNMSLTLCAELAGGSGVVYTWYLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 HLRATNMLGSAAANRTIDFVEPVESLILSASPNPAAVNMSLTLCAELAGGSGVVYTWYLE
730 740 750 760 770 780
790 800 810 820 830
mFLJ00 EGLSWKTSMPSTTHTFATPGLHLVRVTAENQLGSVNATVEVAIQVPVGGLSIRTSEQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|603 EGLSWKTSMPSTTHTFATPGLHLVRVTAENQLGSVNATVEVAIQVPVGGLSIRTSEQQ
790 800 810 820 830
>>gi|81861038|sp|O08852.1|PKD1_MOUSE RecName: Full=Polyc (4293 aa)
initn: 5373 init1: 5373 opt: 5373 Z-score: 6353.0 bits: 1188.9 E(): 0
Smith-Waterman score: 5373; 99.154% identity (99.758% similar) in 827 aa overlap (10-836:982-1808)
10 20 30
mFLJ00 YTRVLPSSSSRTLLQLWLTASNHVSNITVNYNVTVERMN
: ....: ::::::::::::::::::::::
gi|818 EAGSDVAFRWTIDDKQSLTFHNTVFNVIYQSAAIFKLSLTASNHVSNITVNYNVTVERMN
960 970 980 990 1000 1010
40 50 60 70 80 90
mFLJ00 KMHGLWVSAVPTVLPPNATLALTGGVLVDSAVEVAFLWNFGDGEQVLRQFKPPYDESFQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 KMHGLWVSAVPTVLPPNATLALTGGVLVDSAVEVAFLWNFGDGEQVLRQFKPPYDESFQV
1020 1030 1040 1050 1060 1070
100 110 120 130 140 150
mFLJ00 PDPTVAQVLVEHNTTHIYTTPGEYNLTVLVSNTYENLTQQVTVSVRTVLPNVAIGMSSNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 PDPTVAQVLVEHNTTHIYTTPGEYNLTVLVSNTYENLTQQVTVSVRTVLPNVAIGMSSNV
1080 1090 1100 1110 1120 1130
160 170 180 190 200 210
mFLJ00 LVAGQPITFSPYPLPSTDGVLYTWDFGDGSPVLIQSQPVLNHTYSMTGTYRITLEVNNTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 LVAGQPITFSPYPLPSTDGVLYTWDFGDGSPVLIQSQPVLNHTYSMTGTYRITLEVNNTV
1140 1150 1160 1170 1180 1190
220 230 240 250 260 270
mFLJ00 SSVTAHADIRVFQELHGLTVYLSPSVEQGAPMVVSASVESGDNITWTFDMGDGTVFTGPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 SSVTAHADIRVFQELHGLTVYLSPSVEQGAPMVVSASVESGDNITWTFDMGDGTVFTGPE
1200 1210 1220 1230 1240 1250
280 290 300 310 320 330
mFLJ00 ATVQHVYLRAQNFTVTVEAANPAGHLSQSLHVQVFVLEVLRIEPSTCIPTQPSAQLMAHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 ATVQHVYLRAQNFTVTVEAANPAGHLSQSLHVQVFVLEVLRIEPSTCIPTQPSAQLMAHV
1260 1270 1280 1290 1300 1310
340 350 360 370 380 390
mFLJ00 TGDPVHYLFDWTFGDGSSNVTVHGHPSVTHNFTRSGIFPLALVLSSHVNKAHYFTSICVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 TGDPVHYLFDWTFGDGSSNVTVHGHPSVTHNFTRSGIFPLALVLSSHVNKAHYFTSICVE
1320 1330 1340 1350 1360 1370
400 410 420 430 440 450
mFLJ00 PEIRNITLQPERQFVKLGDEARLVAYSWPPFPYRYTWDFGTEDTTHTQTGGSEVKFIYRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 PEIRNITLQPERQFVKLGDEARLVAYSWPPFPYRYTWDFGTEDTTHTQTGGSEVKFIYRE
1380 1390 1400 1410 1420 1430
460 470 480 490 500 510
mFLJ00 PGSYLVIVTVSNNISSTNDSAFVEVQEPVLVTGIRINGSHVLELQQPYLLSAMGSGSPAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 PGSYLVIVTVSNNISSTNDSAFVEVQEPVLVTGIRINGSHVLELQQPYLLSAMGSGSPAT
1440 1450 1460 1470 1480 1490
520 530 540 550 560 570
mFLJ00 YLWELGDGSQSEGPEVTHIYSSTGDFTVRVSGWNEVSRSEAQLNITVKQRVRGLTINASR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 YLWELGDGSQSEGPEVTHIYSSTGDFTVRVSGWNEVSRSEAQLNITVKQRVRGLTINASR
1500 1510 1520 1530 1540 1550
580 590 600 610 620 630
mFLJ00 TVVPLNGSVSFSTLLEVGSDVHYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 TVVPLNGSVSFSTLLEVGSDVHYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEV
1560 1570 1580 1590 1600 1610
640 650 660 670 680 690
mFLJ00 GSAQDSIFIYVLQFIEGLQVAGGDNGCCFPTNYTLQLQAAVRDGTNISYSWTAQQEGSLI
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
gi|818 GSAQDSIFIYVLQFIEGLQVVGGDNGCCFPTNYTLQLQAAVRDGTNISYSWTAQQEGSLI
1620 1630 1640 1650 1660 1670
700 710 720 730 740 750
mFLJ00 TLFGSGKCFSLTALKASTYYVHLRATNMLGSAAANRTIDFVEPVESLILSASPNPAAVNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 TLFGSGKCFSLTALKASTYYVHLRATNMLGSAAANRTIDFVEPVESLILSASPNPAAVNM
1680 1690 1700 1710 1720 1730
760 770 780 790 800 810
mFLJ00 SLTLCAELAGGSGVVYTWYLEEGLSWKTSMPSTTHTFATPGLHLVRVTAENQLGSVNATV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|818 SLTLCAELAGGSGVVYTWYLEEGLSWKTSMPSTTHTFATPGLHLVRVTAENQLGSVNATV
1740 1750 1760 1770 1780 1790
820 830
mFLJ00 EVAIQVPVGGLSIRTSEQQ
:::::::::::::::::
gi|818 EVAIQVPVGGLSIRTSEPDSIFVAAGSTLPFWGQLAEGTNVTWCWTLPGGSKDSQYIAVR
1800 1810 1820 1830 1840 1850
>>gi|148690393|gb|EDL22340.1| polycystic kidney disease (4293 aa)
initn: 5366 init1: 5366 opt: 5366 Z-score: 6344.7 bits: 1187.3 E(): 0
Smith-Waterman score: 5366; 99.033% identity (99.758% similar) in 827 aa overlap (10-836:982-1808)
10 20 30
mFLJ00 YTRVLPSSSSRTLLQLWLTASNHVSNITVNYNVTVERMN
: ....: ::::::::::::::::::::::
gi|148 EAGSDVAFRWTIDDKQSLTFHNTVFNVIYQSAAVFKLSLTASNHVSNITVNYNVTVERMN
960 970 980 990 1000 1010
40 50 60 70 80 90
mFLJ00 KMHGLWVSAVPTVLPPNATLALTGGVLVDSAVEVAFLWNFGDGEQVLRQFKPPYDESFQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 KMHGLWVSAVPTVLPPNATLALTGGVLVDSAVEVAFLWNFGDGEQVLRQFKPPYDESFQV
1020 1030 1040 1050 1060 1070
100 110 120 130 140 150
mFLJ00 PDPTVAQVLVEHNTTHIYTTPGEYNLTVLVSNTYENLTQQVTVSVRTVLPNVAIGMSSNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 PDPTVAQVLVEHNTTHIYTTPGEYNLTVLVSNTYENLTQQVTVSVRTVLPNVAIGMSSNV
1080 1090 1100 1110 1120 1130
160 170 180 190 200 210
mFLJ00 LVAGQPITFSPYPLPSTDGVLYTWDFGDGSPVLIQSQPVLNHTYSMTGTYRITLEVNNTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 LVAGQPITFSPYPLPSTDGVLYTWDFGDGSPVLIQSQPVLNHTYSMTGTYRITLEVNNTV
1140 1150 1160 1170 1180 1190
220 230 240 250 260 270
mFLJ00 SSVTAHADIRVFQELHGLTVYLSPSVEQGAPMVVSASVESGDNITWTFDMGDGTVFTGPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 SSVTAHADIRVFQELHGLTVYLSPSVEQGAPMVVSASVESGDNITWTFDMGDGTVFTGPE
1200 1210 1220 1230 1240 1250
280 290 300 310 320 330
mFLJ00 ATVQHVYLRAQNFTVTVEAANPAGHLSQSLHVQVFVLEVLRIEPSTCIPTQPSAQLMAHV
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
gi|148 ATVQHVYLRAQNFTVTVEAANPAGHLSQSLHVQVFVLEVLHIEPSTCIPTQPSAQLMAHV
1260 1270 1280 1290 1300 1310
340 350 360 370 380 390
mFLJ00 TGDPVHYLFDWTFGDGSSNVTVHGHPSVTHNFTRSGIFPLALVLSSHVNKAHYFTSICVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 TGDPVHYLFDWTFGDGSSNVTVHGHPSVTHNFTRSGIFPLALVLSSHVNKAHYFTSICVE
1320 1330 1340 1350 1360 1370
400 410 420 430 440 450
mFLJ00 PEIRNITLQPERQFVKLGDEARLVAYSWPPFPYRYTWDFGTEDTTHTQTGGSEVKFIYRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 PEIRNITLQPERQFVKLGDEARLVAYSWPPFPYRYTWDFGTEDTTHTQTGGSEVKFIYRE
1380 1390 1400 1410 1420 1430
460 470 480 490 500 510
mFLJ00 PGSYLVIVTVSNNISSTNDSAFVEVQEPVLVTGIRINGSHVLELQQPYLLSAMGSGSPAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 PGSYLVIVTVSNNISSTNDSAFVEVQEPVLVTGIRINGSHVLELQQPYLLSAMGSGSPAT
1440 1450 1460 1470 1480 1490
520 530 540 550 560 570
mFLJ00 YLWELGDGSQSEGPEVTHIYSSTGDFTVRVSGWNEVSRSEAQLNITVKQRVRGLTINASR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 YLWELGDGSQSEGPEVTHIYSSTGDFTVRVSGWNEVSRSEAQLNITVKQRVRGLTINASR
1500 1510 1520 1530 1540 1550
580 590 600 610 620 630
mFLJ00 TVVPLNGSVSFSTLLEVGSDVHYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 TVVPLNGSVSFSTLLEVGSDVHYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEV
1560 1570 1580 1590 1600 1610
640 650 660 670 680 690
mFLJ00 GSAQDSIFIYVLQFIEGLQVAGGDNGCCFPTNYTLQLQAAVRDGTNISYSWTAQQEGSLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 GSAQDSIFIYVLQFIEGLQVAGGDNGCCFPTNYTLQLQAAVRDGTNISYSWTAQQEGSLI
1620 1630 1640 1650 1660 1670
700 710 720 730 740 750
mFLJ00 TLFGSGKCFSLTALKASTYYVHLRATNMLGSAAANRTIDFVEPVESLILSASPNPAAVNM
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
gi|148 TLFGSGKCFSLTSLKASTYYVHLRATNMLGSAAANRTIDFVEPVESLILSASPNPAAVNM
1680 1690 1700 1710 1720 1730
760 770 780 790 800 810
mFLJ00 SLTLCAELAGGSGVVYTWYLEEGLSWKTSMPSTTHTFATPGLHLVRVTAENQLGSVNATV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 SLTLCAELAGGSGVVYTWYLEEGLSWKTSMPSTTHTFATPGLHLVRVTAENQLGSVNATV
1740 1750 1760 1770 1780 1790
820 830
mFLJ00 EVAIQVPVGGLSIRTSEQQ
:::::::::::::::::
gi|148 EVAIQVPVGGLSIRTSEPDSIFVAAGSTLPFWGQLAEGTNVTWCWTLPGGSKDSQYIAVR
1800 1810 1820 1830 1840 1850
>>gi|124487380|ref|NP_038658.2| polycystin 1 [Mus muscul (4293 aa)
initn: 5357 init1: 5357 opt: 5357 Z-score: 6334.1 bits: 1185.4 E(): 0
Smith-Waterman score: 5357; 98.791% identity (99.758% similar) in 827 aa overlap (10-836:982-1808)
10 20 30
mFLJ00 YTRVLPSSSSRTLLQLWLTASNHVSNITVNYNVTVERMN
: ....: ::::::::::::::::::::::
gi|124 EAGSDVAFRWTIDDKQSLTFHNTVFNVIYQSAAIFKLSLTASNHVSNITVNYNVTVERMN
960 970 980 990 1000 1010
40 50 60 70 80 90
mFLJ00 KMHGLWVSAVPTVLPPNATLALTGGVLVDSAVEVAFLWNFGDGEQVLRQFKPPYDESFQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|124 KMHGLWVSAVPTVLPPNATLALTGGVLVDSAVEVAFLWNFGDGEQVLRQFKPPYDESFQV
1020 1030 1040 1050 1060 1070
100 110 120 130 140 150
mFLJ00 PDPTVAQVLVEHNTTHIYTTPGEYNLTVLVSNTYENLTQQVTVSVRTVLPNVAIGMSSNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|124 PDPTVAQVLVEHNTTHIYTTPGEYNLTVLVSNTYENLTQQVTVSVRTVLPNVAIGMSSNV
1080 1090 1100 1110 1120 1130
160 170 180 190 200 210
mFLJ00 LVAGQPITFSPYPLPSTDGVLYTWDFGDGSPVLIQSQPVLNHTYSMTGTYRITLEVNNTV
::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::
gi|124 LVAGQPITFSPYPLPSTDGVLYTWDFGDGSPVLIQSQPVLNHTYSMTGAYRITLEVNNTV
1140 1150 1160 1170 1180 1190
220 230 240 250 260 270
mFLJ00 SSVTAHADIRVFQELHGLTVYLSPSVEQGAPMVVSASVESGDNITWTFDMGDGTVFTGPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|124 SSVTAHADIRVFQELHGLTVYLSPSVEQGAPMVVSASVESGDNITWTFDMGDGTVFTGPE
1200 1210 1220 1230 1240 1250
280 290 300 310 320 330
mFLJ00 ATVQHVYLRAQNFTVTVEAANPAGHLSQSLHVQVFVLEVLRIEPSTCIPTQPSAQLMAHV
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
gi|124 ATVQHVYLRAQNFTVTVEAANPAGHLSQSLHVQVFVLEVLHIEPSTCIPTQPSAQLMAHV
1260 1270 1280 1290 1300 1310
340 350 360 370 380 390
mFLJ00 TGDPVHYLFDWTFGDGSSNVTVHGHPSVTHNFTRSGIFPLALVLSSHVNKAHYFTSICVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|124 TGDPVHYLFDWTFGDGSSNVTVHGHPSVTHNFTRSGIFPLALVLSSHVNKAHYFTSICVE
1320 1330 1340 1350 1360 1370
400 410 420 430 440 450
mFLJ00 PEIRNITLQPERQFVKLGDEARLVAYSWPPFPYRYTWDFGTEDTTHTQTGGSEVKFIYRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|124 PEIRNITLQPERQFVKLGDEARLVAYSWPPFPYRYTWDFGTEDTTHTQTGGSEVKFIYRE
1380 1390 1400 1410 1420 1430
460 470 480 490 500 510
mFLJ00 PGSYLVIVTVSNNISSTNDSAFVEVQEPVLVTGIRINGSHVLELQQPYLLSAMGSGSPAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|124 PGSYLVIVTVSNNISSTNDSAFVEVQEPVLVTGIRINGSHVLELQQPYLLSAMGSGSPAT
1440 1450 1460 1470 1480 1490
520 530 540 550 560 570
mFLJ00 YLWELGDGSQSEGPEVTHIYSSTGDFTVRVSGWNEVSRSEAQLNITVKQRVRGLTINASR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|124 YLWELGDGSQSEGPEVTHIYSSTGDFTVRVSGWNEVSRSEAQLNITVKQRVRGLTINASR
1500 1510 1520 1530 1540 1550
580 590 600 610 620 630
mFLJ00 TVVPLNGSVSFSTLLEVGSDVHYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|124 TVVPLNGSVSFSTLLEVGSDVHYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEV
1560 1570 1580 1590 1600 1610
640 650 660 670 680 690
mFLJ00 GSAQDSIFIYVLQFIEGLQVAGGDNGCCFPTNYTLQLQAAVRDGTNISYSWTAQQEGSLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|124 GSAQDSIFIYVLQFIEGLQVAGGDNGCCFPTNYTLQLQAAVRDGTNISYSWTAQQEGSLI
1620 1630 1640 1650 1660 1670
700 710 720 730 740 750
mFLJ00 TLFGSGKCFSLTALKASTYYVHLRATNMLGSAAANRTIDFVEPVESLILSASPNPAAVNM
::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::
gi|124 TLFGSGKCFSLTSLKASTYYVHLRATNMLGSAAANRTIDFVEPVESLILSASPNPAAVNM
1680 1690 1700 1710 1720 1730
760 770 780 790 800 810
mFLJ00 SLTLCAELAGGSGVVYTWYLEEGLSWKTSMPSTTHTFATPGLHLVRVTAENQLGSVNATV
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
gi|124 SLTLCAELAGGSGVVYTWYLEEGLSWKTSMPSTTHTFAAPGLHLVRVTAENQLGSVNATV
1740 1750 1760 1770 1780 1790
820 830
mFLJ00 EVAIQVPVGGLSIRTSEQQ
:::::::::::::::::
gi|124 EVAIQVPVGGLSIRTSEPDSIFVAAGSTLPFWGQLAEGTNVTWCWTLPGGSKDSQYIAVR
1800 1810 1820 1830 1840 1850
>>gi|149052028|gb|EDM03845.1| rCG34128 [Rattus norvegicu (3865 aa)
initn: 5121 init1: 4260 opt: 5024 Z-score: 5939.9 bits: 1112.3 E(): 0
Smith-Waterman score: 5024; 92.961% identity (97.451% similar) in 824 aa overlap (13-836:984-1806)
10 20 30 40
mFLJ00 YTRVLPSSSSRTLLQLWLTASNHVSNITVNYNVTVERMNKMH
...: :::::::::::::::::::::::::
gi|149 SDVAFRWTIDDKQSLTFHNTVFNVIYQTAAVFKLSLTASNHVSNITVNYNVTVERMNKMH
960 970 980 990 1000 1010
50 60 70 80 90 100
mFLJ00 GLWVSAVPTVLPPNATLALTGGVLVDSAVEVAFLWNFGDGEQVLRQFKPPYDESFQVPDP
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 GLWVSAVPAVLPPNATLALTGGVLVDSAVEVAFLWNFGDGEQVLRQFKPPYDESFQVPDP
1020 1030 1040 1050 1060 1070
110 120 130 140 150 160
mFLJ00 TVAQVLVEHNTTHIYTTPGEYNLTVLVSNTYENLTQQVTVSVRTVLPNVAIGMSSNVLVA
:::::::::::::::.::::::::: :::::::::::: ::::::::::.::::::::.:
gi|149 TVAQVLVEHNTTHIYNTPGEYNLTVTVSNTYENLTQQVPVSVRTVLPNVTIGMSSNVLLA
1080 1090 1100 1110 1120 1130
170 180 190 200 210 220
mFLJ00 GQPITFSPYPLPSTDGVLYTWDFGDGSPVLIQSQPVLNHTYSMTGTYRITLEVNNTVSSV
:::::: ::::::.:::::::::::::::::::::::::::::::::::.::::::::::
gi|149 GQPITFFPYPLPSADGVLYTWDFGDGSPVLIQSQPVLNHTYSMTGTYRISLEVNNTVSSV
1140 1150 1160 1170 1180 1190
230 240 250 260 270 280
mFLJ00 TAHADIRVFQELHGLTVYLSPSVEQGAPMVVSASVESGDNITWTFDMGDGTVFTGPEATV
.::.:: ::::::::::::. ::::::::::.::::::::::::::::::::::::::::
gi|149 AAHVDICVFQELHGLTVYLNQSVEQGAPMVVNASVESGDNITWTFDMGDGTVFTGPEATV
1200 1210 1220 1230 1240 1250
290 300 310 320 330 340
mFLJ00 QHVYLRAQNFTVTVEAANPAGHLSQSLHVQVFVLEVLRIEPSTCIPTQPSAQLMAHVTGD
.::::::::::::: :..::::::::::::::::::::::::::::::::::.:::::::
gi|149 EHVYLRAQNFTVTVGATSPAGHLSQSLHVQVFVLEVLRIEPSTCIPTQPSAQIMAHVTGD
1260 1270 1280 1290 1300 1310
350 360 370 380 390 400
mFLJ00 PVHYLFDWTFGDGSSNVTVHGHPSVTHNFTRSGIFPLALVLSSHVNKAHYFTSICVEPEI
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 PAHYLFDWTFGDGSSNVTVHGHPSVTHNFTRSGIFPLALVLSSHVNKAHYFTSICVEPEI
1320 1330 1340 1350 1360 1370
410 420 430 440 450 460
mFLJ00 RNITLQPERQFVKLGDEARLVAYSWPPFPYRYTWDFGTEDTTHTQTGGSEVKFIYREPGS
:.::::::: ::::::: :::: ::::::::::::::::. ::::::::: ::::::::
gi|149 CNVTLQPERQVVKLGDEAWLVAYPWPPFPYRYTWDFGTEDSIHTQTGGSEVTFIYREPGS
1380 1390 1400 1410 1420 1430
470 480 490 500 510 520
mFLJ00 YLVIVTVSNNISSTNDSAFVEVQEPVLVTGIRINGSHVLELQQPYLLSAMGSGSPATYLW
::::::::::::::::::::.::::: :::::::::::::::::::.::::.::::.:::
gi|149 YLVIVTVSNNISSTNDSAFVDVQEPVSVTGIRINGSHVLELQQPYLFSAMGNGSPAAYLW
1440 1450 1460 1470 1480 1490
530 540 550 560 570 580
mFLJ00 ELGDGSQSEGPEVTHIYSSTGDFTVRVSGWNEVSRSEAQLNITVKQRVRGLTINASRTVV
::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 ELGDGSQHEGPEVTHIYSSTGDFTVRVSGWNEVSRSEAQLNITVKQRVRGLTINASRTVV
1500 1510 1520 1530 1540 1550
590 600 610 620 630 640
mFLJ00 PLNGSVSFSTLLEVGSDVHYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEVGSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 PLNGSVSFSTLLEVGSDVHYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEVGSA
1560 1570 1580 1590 1600 1610
650 660 670 680 690 700
mFLJ00 QDSIFIYVLQFIEGLQVAGGDNGCCFPTNYTLQLQAAVRDGTNISYSWTAQQEGSLITLF
::::::::::.::::::.:::.::::::::::::::::::::::::::::::.:. ::.
gi|149 QDSIFIYVLQLIEGLQVVGGDGGCCFPTNYTLQLQAAVRDGTNISYSWTAQQDGG-PTLI
1620 1630 1640 1650 1660 1670
710 720 730 740 750 760
mFLJ00 GSGKCFSLTALKASTYYVHLRATNMLGSAAANRTIDFVEPVESLILSASPNPAAVNMSLT
.::: ::::::::::::::::::::::::.:::::::::::::::::::::::::: :::
gi|149 SSGKSFSLTALKASTYYVHLRATNMLGSASANRTIDFVEPVESLILSASPNPAAVNTSLT
1680 1690 1700 1710 1720 1730
770 780 790 800 810 820
mFLJ00 LCAELAGGSGVVYTWYLEEGLSWKTSMPSTTHTFATPGLHLVRVTAENQLGSVNATVEVA
: :::::::::::::::::::: .:::::::::::.::::::::::::::::::::.:::
gi|149 LGAELAGGSGVVYTWYLEEGLSRETSMPSTTHTFAAPGLHLVRVTAENQLGSVNATIEVA
1740 1750 1760 1770 1780 1790
830
mFLJ00 IQVPVGGLSIRTSEQQ
.:.:::::::::::
gi|149 VQAPVGGLSIRTSEPDSIFVAAGSTVPFWGQLAEGTNVTWCWTLPGGSKYSQYIDVRFPA
1800 1810 1820 1830 1840 1850
>>gi|11320978|gb|AAG33986.1| Pkd1 [Rattus norvegicus] (4283 aa)
initn: 5101 init1: 4250 opt: 5004 Z-score: 5915.6 bits: 1107.9 E(): 0
Smith-Waterman score: 5004; 92.718% identity (97.209% similar) in 824 aa overlap (13-836:975-1797)
10 20 30 40
mFLJ00 YTRVLPSSSSRTLLQLWLTASNHVSNITVNYNVTVERMNKMH
...: :::::::::::::::::::::::::
gi|113 SDVAFRWTIDDKQSLTFHNTVFNVIYQTAAVFKLSLTASNHVSNITVNYNVTVERMNKMH
950 960 970 980 990 1000
50 60 70 80 90 100
mFLJ00 GLWVSAVPTVLPPNATLALTGGVLVDSAVEVAFLWNFGDGEQVLRQFKPPYDESFQVPDP
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|113 GLWVSAVPAVLPPNATLALTGGVLVDSAVEVAFLWNFGDGEQVLRQFKPPYDESFQVPDP
1010 1020 1030 1040 1050 1060
110 120 130 140 150 160
mFLJ00 TVAQVLVEHNTTHIYTTPGEYNLTVLVSNTYENLTQQVTVSVRTVLPNVAIGMSSNVLVA
:::::::::::::::.::::::::: :::::::::::: ::::::::::.::::::::.:
gi|113 TVAQVLVEHNTTHIYNTPGEYNLTVTVSNTYENLTQQVPVSVRTVLPNVTIGMSSNVLLA
1070 1080 1090 1100 1110 1120
170 180 190 200 210 220
mFLJ00 GQPITFSPYPLPSTDGVLYTWDFGDGSPVLIQSQPVLNHTYSMTGTYRITLEVNNTVSSV
:::::: ::::::.:::::::::::::::::::::::::::::::::::.::::::::::
gi|113 GQPITFFPYPLPSADGVLYTWDFGDGSPVLIQSQPVLNHTYSMTGTYRISLEVNNTVSSV
1130 1140 1150 1160 1170 1180
230 240 250 260 270 280
mFLJ00 TAHADIRVFQELHGLTVYLSPSVEQGAPMVVSASVESGDNITWTFDMGDGTVFTGPEATV
.::.:: ::::::::::::. ::::::::::.::::::::::::::::::::::::::::
gi|113 AAHVDICVFQELHGLTVYLNQSVEQGAPMVVNASVESGDNITWTFDMGDGTVFTGPEATV
1190 1200 1210 1220 1230 1240
290 300 310 320 330 340
mFLJ00 QHVYLRAQNFTVTVEAANPAGHLSQSLHVQVFVLEVLRIEPSTCIPTQPSAQLMAHVTGD
.::::::::::::: :..::::::::::::::::::::::::::::::::::.:::::::
gi|113 EHVYLRAQNFTVTVGATSPAGHLSQSLHVQVFVLEVLRIEPSTCIPTQPSAQIMAHVTGD
1250 1260 1270 1280 1290 1300
350 360 370 380 390 400
mFLJ00 PVHYLFDWTFGDGSSNVTVHGHPSVTHNFTRSGIFPLALVLSSHVNKAHYFTSICVEPEI
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|113 PAHYLFDWTFGDGSSNVTVHGHPSVTHNFTRSGIFPLALVLSSHVNKAHYFTSICVEPEI
1310 1320 1330 1340 1350 1360
410 420 430 440 450 460
mFLJ00 RNITLQPERQFVKLGDEARLVAYSWPPFPYRYTWDFGTEDTTHTQTGGSEVKFIYREPGS
:.::::::: ::::::: :::: ::::::::::::::::. ::::::::: ::::::::
gi|113 CNVTLQPERQVVKLGDEAWLVAYPWPPFPYRYTWDFGTEDSIHTQTGGSEVTFIYREPGS
1370 1380 1390 1400 1410 1420
470 480 490 500 510 520
mFLJ00 YLVIVTVSNNISSTNDSAFVEVQEPVLVTGIRINGSHVLELQQPYLLSAMGSGSPATYLW
::::::::::::::::::::.::::: :::::::::::::::::::.::::.::::.:::
gi|113 YLVIVTVSNNISSTNDSAFVDVQEPVSVTGIRINGSHVLELQQPYLFSAMGNGSPAAYLW
1430 1440 1450 1460 1470 1480
530 540 550 560 570 580
mFLJ00 ELGDGSQSEGPEVTHIYSSTGDFTVRVSGWNEVSRSEAQLNITVKQRVRGLTINASRTVV
::::::: :::::::::::::::::::::::::::::::::::::::::::::::: :::
gi|113 ELGDGSQHEGPEVTHIYSSTGDFTVRVSGWNEVSRSEAQLNITVKQRVRGLTINASPTVV
1490 1500 1510 1520 1530 1540
590 600 610 620 630 640
mFLJ00 PLNGSVSFSTLLEVGSDVHYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEVGSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|113 PLNGSVSFSTLLEVGSDVHYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEVGSA
1550 1560 1570 1580 1590 1600
650 660 670 680 690 700
mFLJ00 QDSIFIYVLQFIEGLQVAGGDNGCCFPTNYTLQLQAAVRDGTNISYSWTAQQEGSLITLF
::::::::::.::::::.:::.::::::::::::::::::::::::::::::.:. ::.
gi|113 QDSIFIYVLQLIEGLQVVGGDGGCCFPTNYTLQLQAAVRDGTNISYSWTAQQDGG-PTLI
1610 1620 1630 1640 1650 1660
710 720 730 740 750 760
mFLJ00 GSGKCFSLTALKASTYYVHLRATNMLGSAAANRTIDFVEPVESLILSASPNPAAVNMSLT
.::: ::::::::::::::::::::::::.:::::::::::::::::::::::::: :::
gi|113 SSGKSFSLTALKASTYYVHLRATNMLGSASANRTIDFVEPVESLILSASPNPAAVNTSLT
1670 1680 1690 1700 1710 1720
770 780 790 800 810 820
mFLJ00 LCAELAGGSGVVYTWYLEEGLSWKTSMPSTTHTFATPGLHLVRVTAENQLGSVNATVEVA
: :::::::::::::::::::: .:::::::::::.::::::::::::::::::::.:::
gi|113 LGAELAGGSGVVYTWYLEEGLSRETSMPSTTHTFAAPGLHLVRVTAENQLGSVNATIEVA
1730 1740 1750 1760 1770 1780
830
mFLJ00 IQVPVGGLSIRTSEQQ
.. :::::::::::
gi|113 VHGPVGGLSIRTSEPDSIFVAAGSTVPFWGQLAEGTNVTWCWTLPGGSKYSQYIDVRFPA
1790 1800 1810 1820 1830 1840
>>gi|1586345|prf||2203412A polycystin (4302 aa)
initn: 4196 init1: 3445 opt: 4193 Z-score: 4954.1 bits: 930.0 E(): 0
Smith-Waterman score: 4193; 76.663% identity (91.898% similar) in 827 aa overlap (10-836:988-1811)
10 20 30
mFLJ00 YTRVLPSSSSRTLLQLWLTASNHVSNITVNYNVTVERMN
: ....: :::::::::.::::::::::::
gi|158 EAGSDMVFRWTINDKQSLTFQNVVFNVIYQSAAVFKLSLTASNHVSNVTVNYNVTVERMN
960 970 980 990 1000 1010
40 50 60 70 80 90
mFLJ00 KMHGLWVSAVPTVLPPNATLALTGGVLVDSAVEVAFLWNFGDGEQVLRQFKPPYDESFQV
.:.:: ::.::.:: :::::.::::::::::::::::::::::::.:.::.:::.::: :
gi|158 RMQGLQVSTVPAVLSPNATLVLTGGVLVDSAVEVAFLWNFGDGEQALHQFQPPYNESFPV
1020 1030 1040 1050 1060 1070
100 110 120 130 140 150
mFLJ00 PDPTVAQVLVEHNTTHIYTTPGEYNLTVLVSNTYENLTQQVTVSVRTVLPNVAIGMSSNV
:::.:::::::::. : :..:::: ::::.::..::::::: ::::. ::.::.:.:..:
gi|158 PDPSVAQVLVEHNVMHTYAAPGEYLLTVLASNAFENLTQQVPVSVRASLPSVAVGVSDGV
1080 1090 1100 1110 1120 1130
160 170 180 190 200 210
mFLJ00 LVAGQPITFSPYPLPSTDGVLYTWDFGDGSPVLIQSQPVLNHTYSMTGTYRITLEVNNTV
::::.:.:: :.:::: ::::::::::::::: ::::. ::::. :::.. :::::::
gi|158 LVAGRPVTFYPHPLPSPGGVLYTWDFGDGSPVLTQSQPAANHTYASRGTYHVRLEVNNTV
1140 1150 1160 1170 1180 1190
220 230 240 250 260 270
mFLJ00 SSVTAHADIRVFQELHGLTVYLSPSVEQGAPMVVSASVESGDNITWTFDMGDGTVFTGPE
:...:.::.:::.::.::.: .: .::::::.::::.:..:::::::::::::::..:::
gi|158 SGAAAQADVRVFEELRGLSVDMSLAVEQGAPVVVSAAVQTGDNITWTFDMGDGTVLSGPE
1200 1210 1220 1230 1240 1250
280 290 300 310 320 330
mFLJ00 ATVQHVYLRAQNFTVTVEAANPAGHLSQSLHVQVFVLEVLRIEPSTCIPTQPSAQLMAHV
:::.:::::::: :::: ::.:::::..:::: ::::::::.::..::::::.:.: :.:
gi|158 ATVEHVYLRAQNCTVTVGAASPAGHLARSLHVLVFVLEVLRVEPAACIPTQPDARLTAYV
1260 1270 1280 1290 1300 1310
340 350 360 370 380 390
mFLJ00 TGDPVHYLFDWTFGDGSSNVTVHGHPSVTHNFTRSGIFPLALVLSSHVNKAHYFTSICVE
::.:.::::::::::::::.::.: :.::::::::: :::::::::.::.::::::::::
gi|158 TGNPAHYLFDWTFGDGSSNTTVRGCPTVTHNFTRSGTFPLALVLSSRVNRAHYFTSICVE
1320 1330 1340 1350 1360 1370
400 410 420 430 440 450
mFLJ00 PEIRNITLQPERQFVKLGDEARLVAYSWPPFPYRYTWDFGTEDTTHTQTGGSEVKFIYRE
::. :.:::::::::.::::: ::: .:::::::::::::::... :.. : :: ::::.
gi|158 PEVGNVTLQPERQFVQLGDEAWLVACAWPPFPYRYTWDFGTEEAAPTRARGPEVTFIYRD
1380 1390 1400 1410 1420 1430
460 470 480 490 500 510
mFLJ00 PGSYLVIVTVSNNISSTNDSAFVEVQEPVLVTGIRINGSHVLELQQPYLLSAMGSGSPAT
:::::: ::.:::::..::::.::::::::::.:..::: ::::::::.::.: : ::.
gi|158 PGSYLVTVTASNNISAANDSALVEVQEPVLVTSIKVNGSLGLELQQPYLFSAVGRGRPAS
1440 1450 1460 1470 1480 1490
520 530 540 550 560 570
mFLJ00 YLWELGDGSQSEGPEVTHIYSSTGDFTVRVSGWNEVSRSEAQLNITVKQRVRGLTINASR
:::.::::. ::::::: :.:::::::::.:::::::::: ::.:::.:::::..::::
gi|158 YLWDLGDGGWLEGPEVTHAYNSTGDFTVRVAGWNEVSRSEAWLNVTVKRRVRGLVVNASR
1500 1510 1520 1530 1540 1550
580 590 600 610 620 630
mFLJ00 TVVPLNGSVSFSTLLEVGSDVHYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEV
::::::::::::: ::.::::.::::::::::::::::::::::::::::::::::::::
gi|158 TVVPLNGSVSFSTSLEAGSDVRYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEV
1560 1570 1580 1590 1600 1610
640 650 660 670 680 690
mFLJ00 GSAQDSIFIYVLQFIEGLQVAGGDNGCCFPTNYTLQLQAAVRDGTNISYSWTAQQEGSLI
::::::::.::::.::::::.:: : ::::.:.::::.::::::.:::::: .. .
gi|158 GSAQDSIFVYVLQLIEGLQVVGG--GRYFPTNHTVQLQAVVRDGTNVSYSWTAWRDRG-P
1620 1630 1640 1650 1660 1670
700 710 720 730 740 750
mFLJ00 TLFGSGKCFSLTALKASTYYVHLRATNMLGSAAANRTIDFVEPVESLILSASPNPAAVNM
.: :::: ::::.:.:.::.:.:::::::::: :. :.:::::: :...:::::::::
gi|158 ALAGSGKGFSLTVLEAGTYHVQLRATNMLGSAWADCTMDFVEPVGWLMVTASPNPAAVNT
1680 1690 1700 1710 1720 1730
760 770 780 790 800 810
mFLJ00 SLTLCAELAGGSGVVYTWYLEEGLSWKTSMPSTTHTFATPGLHLVRVTAENQLGSVNATV
:.:: ::::::::::::: :::::::.:: : :::.: ::::::: .:: : :::.::::
gi|158 SVTLSAELAGGSGVVYTWSLEEGLSWETSEPFTTHSFPTPGLHLVTMTAGNPLGSANATV
1740 1750 1760 1770 1780 1790
820 830
mFLJ00 EVAIQVPVGGLSIRTSEQQ
:: .::::.:::::.::
gi|158 EVDVQVPVSGLSIRASEPGGSFVAAGSSVPFWGQLATGTNVSWCWAVPGGSSKRGPHVTM
1800 1810 1820 1830 1840 1850
>>gi|903758|gb|AAC41765.1| polycystic kidney disease 1 p (4292 aa)
initn: 4193 init1: 3442 opt: 4190 Z-score: 4950.6 bits: 929.4 E(): 0
Smith-Waterman score: 4190; 76.663% identity (91.898% similar) in 827 aa overlap (10-836:988-1811)
10 20 30
mFLJ00 YTRVLPSSSSRTLLQLWLTASNHVSNITVNYNVTVERMN
: ....: :::::::::.::::::::::::
gi|903 EAGSDMVFRWTINDKQSLTFQNVVFNVIYQSAAVFKLSLTASNHVSNVTVNYNVTVERMN
960 970 980 990 1000 1010
40 50 60 70 80 90
mFLJ00 KMHGLWVSAVPTVLPPNATLALTGGVLVDSAVEVAFLWNFGDGEQVLRQFKPPYDESFQV
.:.:: ::.::.:: ::::::::.:::::::::::::::::::::.:.::.:::.::: :
gi|903 RMQGLQVSTVPAVLSPNATLALTAGVLVDSAVEVAFLWNFGDGEQALHQFQPPYNESFPV
1020 1030 1040 1050 1060 1070
100 110 120 130 140 150
mFLJ00 PDPTVAQVLVEHNTTHIYTTPGEYNLTVLVSNTYENLTQQVTVSVRTVLPNVAIGMSSNV
:::.:::::::::. : :..:::: ::::.::..::::::: ::::. ::.::.:.:..:
gi|903 PDPSVAQVLVEHNVMHTYAAPGEYLLTVLASNAFENLTQQVPVSVRASLPSVAVGVSDGV
1080 1090 1100 1110 1120 1130
160 170 180 190 200 210
mFLJ00 LVAGQPITFSPYPLPSTDGVLYTWDFGDGSPVLIQSQPVLNHTYSMTGTYRITLEVNNTV
::::.:.:: :.:::: ::::::::::::::: ::::. ::::. :::.. :::::::
gi|903 LVAGRPVTFYPHPLPSPGGVLYTWDFGDGSPVLTQSQPAANHTYASRGTYHVRLEVNNTV
1140 1150 1160 1170 1180 1190
220 230 240 250 260 270
mFLJ00 SSVTAHADIRVFQELHGLTVYLSPSVEQGAPMVVSASVESGDNITWTFDMGDGTVFTGPE
:...:.::.:::.::.::.: .: .::::::.::::.:..:::::::::::::::..:::
gi|903 SGAAAQADVRVFEELRGLSVDMSLAVEQGAPVVVSAAVQTGDNITWTFDMGDGTVLSGPE
1200 1210 1220 1230 1240 1250
280 290 300 310 320 330
mFLJ00 ATVQHVYLRAQNFTVTVEAANPAGHLSQSLHVQVFVLEVLRIEPSTCIPTQPSAQLMAHV
:::.:::::::: :::: ::.:::::..:::: ::::::::.::..::::::.:.: :.:
gi|903 ATVEHVYLRAQNCTVTVGAASPAGHLARSLHVLVFVLEVLRVEPAACIPTQPDARLTAYV
1260 1270 1280 1290 1300 1310
340 350 360 370 380 390
mFLJ00 TGDPVHYLFDWTFGDGSSNVTVHGHPSVTHNFTRSGIFPLALVLSSHVNKAHYFTSICVE
::.:.::::::::::::::.::.: :.::::::::: :::::::::.::.::::::::::
gi|903 TGNPAHYLFDWTFGDGSSNTTVRGCPTVTHNFTRSGTFPLALVLSSRVNRAHYFTSICVE
1320 1330 1340 1350 1360 1370
400 410 420 430 440 450
mFLJ00 PEIRNITLQPERQFVKLGDEARLVAYSWPPFPYRYTWDFGTEDTTHTQTGGSEVKFIYRE
::. :.:::::::::.::::: ::: .:::::::::::::::... :.. : :: ::::.
gi|903 PEVGNVTLQPERQFVQLGDEAWLVACAWPPFPYRYTWDFGTEEAAPTRARGPEVTFIYRD
1380 1390 1400 1410 1420 1430
460 470 480 490 500 510
mFLJ00 PGSYLVIVTVSNNISSTNDSAFVEVQEPVLVTGIRINGSHVLELQQPYLLSAMGSGSPAT
:::::: ::.:::::..::::.::::::::::.:..::: ::::::::.::.: : ::.
gi|903 PGSYLVTVTASNNISAANDSALVEVQEPVLVTSIKVNGSLGLELQQPYLFSAVGRGRPAS
1440 1450 1460 1470 1480 1490
520 530 540 550 560 570
mFLJ00 YLWELGDGSQSEGPEVTHIYSSTGDFTVRVSGWNEVSRSEAQLNITVKQRVRGLTINASR
:::.::::. ::::::: :.:::::::::.:::::::::: ::.:::.:::::..::::
gi|903 YLWDLGDGGWLEGPEVTHAYNSTGDFTVRVAGWNEVSRSEAWLNVTVKRRVRGLVVNASR
1500 1510 1520 1530 1540 1550
580 590 600 610 620 630
mFLJ00 TVVPLNGSVSFSTLLEVGSDVHYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEV
::::::::::::: ::.::::.::::::::::::::::::::::::::::::::::::::
gi|903 TVVPLNGSVSFSTSLEAGSDVRYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEV
1560 1570 1580 1590 1600 1610
640 650 660 670 680 690
mFLJ00 GSAQDSIFIYVLQFIEGLQVAGGDNGCCFPTNYTLQLQAAVRDGTNISYSWTAQQEGSLI
::::::::.::::.::::::.:: : ::::.:.::::.::::::.:::::: .. .
gi|903 GSAQDSIFVYVLQLIEGLQVVGG--GRYFPTNHTVQLQAVVRDGTNVSYSWTAWRDRG-P
1620 1630 1640 1650 1660 1670
700 710 720 730 740 750
mFLJ00 TLFGSGKCFSLTALKASTYYVHLRATNMLGSAAANRTIDFVEPVESLILSASPNPAAVNM
.: :::: ::::.:.:.::.:.:::::::::: :. :.:::::: :...:::::::::
gi|903 ALAGSGKGFSLTVLEAGTYHVQLRATNMLGSAWADCTMDFVEPVGWLMVTASPNPAAVNT
1680 1690 1700 1710 1720 1730
760 770 780 790 800 810
mFLJ00 SLTLCAELAGGSGVVYTWYLEEGLSWKTSMPSTTHTFATPGLHLVRVTAENQLGSVNATV
:.:: ::::::::::::: :::::::.:: : :::.: ::::::: .:: : :::.::::
gi|903 SVTLSAELAGGSGVVYTWSLEEGLSWETSEPFTTHSFPTPGLHLVTMTAGNPLGSANATV
1740 1750 1760 1770 1780 1790
820 830
mFLJ00 EVAIQVPVGGLSIRTSEQQ
:: .::::.:::::.::
gi|903 EVDVQVPVSGLSIRASEPGGSFVAAGSSVPFWGQLATGTNVSWCWAVPGGSSKRGPHVTM
1800 1810 1820 1830 1840 1850
>>gi|904223|gb|AAC37576.1| polycystic kidney disease 1 p (4302 aa)
initn: 4193 init1: 3442 opt: 4190 Z-score: 4950.6 bits: 929.4 E(): 0
Smith-Waterman score: 4190; 76.663% identity (91.898% similar) in 827 aa overlap (10-836:988-1811)
10 20 30
mFLJ00 YTRVLPSSSSRTLLQLWLTASNHVSNITVNYNVTVERMN
: ....: :::::::::.::::::::::::
gi|904 EAGSDMVFRWTINDKQSLTFQNVVFNVIYQSAAVFKLSLTASNHVSNVTVNYNVTVERMN
960 970 980 990 1000 1010
40 50 60 70 80 90
mFLJ00 KMHGLWVSAVPTVLPPNATLALTGGVLVDSAVEVAFLWNFGDGEQVLRQFKPPYDESFQV
.:.:: ::.::.:: ::::::::.:::::::::::::::::::::.:.::.:::.::: :
gi|904 RMQGLQVSTVPAVLSPNATLALTAGVLVDSAVEVAFLWNFGDGEQALHQFQPPYNESFPV
1020 1030 1040 1050 1060 1070
100 110 120 130 140 150
mFLJ00 PDPTVAQVLVEHNTTHIYTTPGEYNLTVLVSNTYENLTQQVTVSVRTVLPNVAIGMSSNV
:::.:::::::::. : :..:::: ::::.::..::::::: ::::. ::.::.:.:..:
gi|904 PDPSVAQVLVEHNVMHTYAAPGEYLLTVLASNAFENLTQQVPVSVRASLPSVAVGVSDGV
1080 1090 1100 1110 1120 1130
160 170 180 190 200 210
mFLJ00 LVAGQPITFSPYPLPSTDGVLYTWDFGDGSPVLIQSQPVLNHTYSMTGTYRITLEVNNTV
::::.:.:: :.:::: ::::::::::::::: ::::. ::::. :::.. :::::::
gi|904 LVAGRPVTFYPHPLPSPGGVLYTWDFGDGSPVLTQSQPAANHTYASRGTYHVRLEVNNTV
1140 1150 1160 1170 1180 1190
220 230 240 250 260 270
mFLJ00 SSVTAHADIRVFQELHGLTVYLSPSVEQGAPMVVSASVESGDNITWTFDMGDGTVFTGPE
:...:.::.:::.::.::.: .: .::::::.::::.:..:::::::::::::::..:::
gi|904 SGAAAQADVRVFEELRGLSVDMSLAVEQGAPVVVSAAVQTGDNITWTFDMGDGTVLSGPE
1200 1210 1220 1230 1240 1250
280 290 300 310 320 330
mFLJ00 ATVQHVYLRAQNFTVTVEAANPAGHLSQSLHVQVFVLEVLRIEPSTCIPTQPSAQLMAHV
:::.:::::::: :::: ::.:::::..:::: ::::::::.::..::::::.:.: :.:
gi|904 ATVEHVYLRAQNCTVTVGAASPAGHLARSLHVLVFVLEVLRVEPAACIPTQPDARLTAYV
1260 1270 1280 1290 1300 1310
340 350 360 370 380 390
mFLJ00 TGDPVHYLFDWTFGDGSSNVTVHGHPSVTHNFTRSGIFPLALVLSSHVNKAHYFTSICVE
::.:.::::::::::::::.::.: :.::::::::: :::::::::.::.::::::::::
gi|904 TGNPAHYLFDWTFGDGSSNTTVRGCPTVTHNFTRSGTFPLALVLSSRVNRAHYFTSICVE
1320 1330 1340 1350 1360 1370
400 410 420 430 440 450
mFLJ00 PEIRNITLQPERQFVKLGDEARLVAYSWPPFPYRYTWDFGTEDTTHTQTGGSEVKFIYRE
::. :.:::::::::.::::: ::: .:::::::::::::::... :.. : :: ::::.
gi|904 PEVGNVTLQPERQFVQLGDEAWLVACAWPPFPYRYTWDFGTEEAAPTRARGPEVTFIYRD
1380 1390 1400 1410 1420 1430
460 470 480 490 500 510
mFLJ00 PGSYLVIVTVSNNISSTNDSAFVEVQEPVLVTGIRINGSHVLELQQPYLLSAMGSGSPAT
:::::: ::.:::::..::::.::::::::::.:..::: ::::::::.::.: : ::.
gi|904 PGSYLVTVTASNNISAANDSALVEVQEPVLVTSIKVNGSLGLELQQPYLFSAVGRGRPAS
1440 1450 1460 1470 1480 1490
520 530 540 550 560 570
mFLJ00 YLWELGDGSQSEGPEVTHIYSSTGDFTVRVSGWNEVSRSEAQLNITVKQRVRGLTINASR
:::.::::. ::::::: :.:::::::::.:::::::::: ::.:::.:::::..::::
gi|904 YLWDLGDGGWLEGPEVTHAYNSTGDFTVRVAGWNEVSRSEAWLNVTVKRRVRGLVVNASR
1500 1510 1520 1530 1540 1550
580 590 600 610 620 630
mFLJ00 TVVPLNGSVSFSTLLEVGSDVHYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEV
::::::::::::: ::.::::.::::::::::::::::::::::::::::::::::::::
gi|904 TVVPLNGSVSFSTSLEAGSDVRYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEV
1560 1570 1580 1590 1600 1610
640 650 660 670 680 690
mFLJ00 GSAQDSIFIYVLQFIEGLQVAGGDNGCCFPTNYTLQLQAAVRDGTNISYSWTAQQEGSLI
::::::::.::::.::::::.:: : ::::.:.::::.::::::.:::::: .. .
gi|904 GSAQDSIFVYVLQLIEGLQVVGG--GRYFPTNHTVQLQAVVRDGTNVSYSWTAWRDRG-P
1620 1630 1640 1650 1660 1670
700 710 720 730 740 750
mFLJ00 TLFGSGKCFSLTALKASTYYVHLRATNMLGSAAANRTIDFVEPVESLILSASPNPAAVNM
.: :::: ::::.:.:.::.:.:::::::::: :. :.:::::: :...:::::::::
gi|904 ALAGSGKGFSLTVLEAGTYHVQLRATNMLGSAWADCTMDFVEPVGWLMVTASPNPAAVNT
1680 1690 1700 1710 1720 1730
760 770 780 790 800 810
mFLJ00 SLTLCAELAGGSGVVYTWYLEEGLSWKTSMPSTTHTFATPGLHLVRVTAENQLGSVNATV
:.:: ::::::::::::: :::::::.:: : :::.: ::::::: .:: : :::.::::
gi|904 SVTLSAELAGGSGVVYTWSLEEGLSWETSEPFTTHSFPTPGLHLVTMTAGNPLGSANATV
1740 1750 1760 1770 1780 1790
820 830
mFLJ00 EVAIQVPVGGLSIRTSEQQ
:: .::::.:::::.::
gi|904 EVDVQVPVSGLSIRASEPGGSFVAAGSSVPFWGQLATGTNVSWCWAVPGGSSKRGPHVTM
1800 1810 1820 1830 1840 1850
>>gi|45645177|sp|P98161.2|PKD1_HUMAN RecName: Full=Polyc (4303 aa)
initn: 4193 init1: 3442 opt: 4190 Z-score: 4950.6 bits: 929.4 E(): 0
Smith-Waterman score: 4190; 76.663% identity (91.898% similar) in 827 aa overlap (10-836:988-1811)
10 20 30
mFLJ00 YTRVLPSSSSRTLLQLWLTASNHVSNITVNYNVTVERMN
: ....: :::::::::.::::::::::::
gi|456 EAGSDMVFRWTINDKQSLTFQNVVFNVIYQSAAVFKLSLTASNHVSNVTVNYNVTVERMN
960 970 980 990 1000 1010
40 50 60 70 80 90
mFLJ00 KMHGLWVSAVPTVLPPNATLALTGGVLVDSAVEVAFLWNFGDGEQVLRQFKPPYDESFQV
.:.:: ::.::.:: ::::::::.:::::::::::::::::::::.:.::.:::.::: :
gi|456 RMQGLQVSTVPAVLSPNATLALTAGVLVDSAVEVAFLWNFGDGEQALHQFQPPYNESFPV
1020 1030 1040 1050 1060 1070
100 110 120 130 140 150
mFLJ00 PDPTVAQVLVEHNTTHIYTTPGEYNLTVLVSNTYENLTQQVTVSVRTVLPNVAIGMSSNV
:::.:::::::::. : :..:::: ::::.::..::::::: ::::. ::.::.:.:..:
gi|456 PDPSVAQVLVEHNVMHTYAAPGEYLLTVLASNAFENLTQQVPVSVRASLPSVAVGVSDGV
1080 1090 1100 1110 1120 1130
160 170 180 190 200 210
mFLJ00 LVAGQPITFSPYPLPSTDGVLYTWDFGDGSPVLIQSQPVLNHTYSMTGTYRITLEVNNTV
::::.:.:: :.:::: ::::::::::::::: ::::. ::::. :::.. :::::::
gi|456 LVAGRPVTFYPHPLPSPGGVLYTWDFGDGSPVLTQSQPAANHTYASRGTYHVRLEVNNTV
1140 1150 1160 1170 1180 1190
220 230 240 250 260 270
mFLJ00 SSVTAHADIRVFQELHGLTVYLSPSVEQGAPMVVSASVESGDNITWTFDMGDGTVFTGPE
:...:.::.:::.::.::.: .: .::::::.::::.:..:::::::::::::::..:::
gi|456 SGAAAQADVRVFEELRGLSVDMSLAVEQGAPVVVSAAVQTGDNITWTFDMGDGTVLSGPE
1200 1210 1220 1230 1240 1250
280 290 300 310 320 330
mFLJ00 ATVQHVYLRAQNFTVTVEAANPAGHLSQSLHVQVFVLEVLRIEPSTCIPTQPSAQLMAHV
:::.:::::::: :::: ::.:::::..:::: ::::::::.::..::::::.:.: :.:
gi|456 ATVEHVYLRAQNCTVTVGAASPAGHLARSLHVLVFVLEVLRVEPAACIPTQPDARLTAYV
1260 1270 1280 1290 1300 1310
340 350 360 370 380 390
mFLJ00 TGDPVHYLFDWTFGDGSSNVTVHGHPSVTHNFTRSGIFPLALVLSSHVNKAHYFTSICVE
::.:.::::::::::::::.::.: :.::::::::: :::::::::.::.::::::::::
gi|456 TGNPAHYLFDWTFGDGSSNTTVRGCPTVTHNFTRSGTFPLALVLSSRVNRAHYFTSICVE
1320 1330 1340 1350 1360 1370
400 410 420 430 440 450
mFLJ00 PEIRNITLQPERQFVKLGDEARLVAYSWPPFPYRYTWDFGTEDTTHTQTGGSEVKFIYRE
::. :.:::::::::.::::: ::: .:::::::::::::::... :.. : :: ::::.
gi|456 PEVGNVTLQPERQFVQLGDEAWLVACAWPPFPYRYTWDFGTEEAAPTRARGPEVTFIYRD
1380 1390 1400 1410 1420 1430
460 470 480 490 500 510
mFLJ00 PGSYLVIVTVSNNISSTNDSAFVEVQEPVLVTGIRINGSHVLELQQPYLLSAMGSGSPAT
:::::: ::.:::::..::::.::::::::::.:..::: ::::::::.::.: : ::.
gi|456 PGSYLVTVTASNNISAANDSALVEVQEPVLVTSIKVNGSLGLELQQPYLFSAVGRGRPAS
1440 1450 1460 1470 1480 1490
520 530 540 550 560 570
mFLJ00 YLWELGDGSQSEGPEVTHIYSSTGDFTVRVSGWNEVSRSEAQLNITVKQRVRGLTINASR
:::.::::. ::::::: :.:::::::::.:::::::::: ::.:::.:::::..::::
gi|456 YLWDLGDGGWLEGPEVTHAYNSTGDFTVRVAGWNEVSRSEAWLNVTVKRRVRGLVVNASR
1500 1510 1520 1530 1540 1550
580 590 600 610 620 630
mFLJ00 TVVPLNGSVSFSTLLEVGSDVHYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEV
::::::::::::: ::.::::.::::::::::::::::::::::::::::::::::::::
gi|456 TVVPLNGSVSFSTSLEAGSDVRYSWVLCDRCTPIPGGPTISYTFRSVGTFNIIVTAENEV
1560 1570 1580 1590 1600 1610
640 650 660 670 680 690
mFLJ00 GSAQDSIFIYVLQFIEGLQVAGGDNGCCFPTNYTLQLQAAVRDGTNISYSWTAQQEGSLI
::::::::.::::.::::::.:: : ::::.:.::::.::::::.:::::: .. .
gi|456 GSAQDSIFVYVLQLIEGLQVVGG--GRYFPTNHTVQLQAVVRDGTNVSYSWTAWRDRG-P
1620 1630 1640 1650 1660 1670
700 710 720 730 740 750
mFLJ00 TLFGSGKCFSLTALKASTYYVHLRATNMLGSAAANRTIDFVEPVESLILSASPNPAAVNM
.: :::: ::::.:.:.::.:.:::::::::: :. :.:::::: :...:::::::::
gi|456 ALAGSGKGFSLTVLEAGTYHVQLRATNMLGSAWADCTMDFVEPVGWLMVTASPNPAAVNT
1680 1690 1700 1710 1720 1730
760 770 780 790 800 810
mFLJ00 SLTLCAELAGGSGVVYTWYLEEGLSWKTSMPSTTHTFATPGLHLVRVTAENQLGSVNATV
:.:: ::::::::::::: :::::::.:: : :::.: ::::::: .:: : :::.::::
gi|456 SVTLSAELAGGSGVVYTWSLEEGLSWETSEPFTTHSFPTPGLHLVTMTAGNPLGSANATV
1740 1750 1760 1770 1780 1790
820 830
mFLJ00 EVAIQVPVGGLSIRTSEQQ
:: .::::.:::::.::
gi|456 EVDVQVPVSGLSIRASEPGGSFVAAGSSVPFWGQLATGTNVSWCWAVPGGSSKRGPHVTM
1800 1810 1820 1830 1840 1850
838 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Mar 13 04:17:53 2009 done: Fri Mar 13 04:26:23 2009
Total Scan time: 1117.790 Total Display time: 0.860
Function used was FASTA [version 34.26.5 April 26, 2007]