# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj26053.fasta.nr -Q ../query/mKIAA1234.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1234, 208 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920342 sequences Expectation_n fit: rho(ln(x))= 4.6210+/-0.000178; mu= 10.3527+/- 0.010 mean_var=57.7065+/-11.126, 0's: 39 Z-trim: 48 B-trim: 0 in 0/65 Lambda= 0.168835 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|4164151|dbj|BAA37132.1| AhR repressor [Mus musc ( 701) 1406 350.6 3.4e-94 gi|123790782|sp|Q3U1U7.1|AHRR_MOUSE RecName: Full= ( 701) 1406 350.6 3.4e-94 gi|74185895|dbj|BAE32810.1| unnamed protein produc ( 701) 1406 350.6 3.4e-94 gi|81864909|sp|Q75NT5.1|AHRR_RAT RecName: Full=Ary ( 701) 1387 345.9 8.5e-93 gi|110002637|gb|AAI18535.1| Ahrr protein [Mus musc ( 573) 1167 292.3 9.8e-77 gi|194224067|ref|XP_001490968.2| PREDICTED: simila ( 783) 1114 279.5 9.6e-73 gi|162423760|gb|ABX89616.1| aryl hydrocarbon recep ( 697) 1099 275.8 1.1e-71 gi|189027651|sp|A9YTQ3.2|AHRR_HUMAN RecName: Full= ( 701) 1099 275.8 1.1e-71 gi|149638618|ref|XP_001514133.1| PREDICTED: simila ( 638) 1012 254.6 2.5e-65 gi|224045945|ref|XP_002190162.1| PREDICTED: simila ( 757) 983 247.6 3.8e-63 gi|160878073|gb|ABX52001.1| aryl hydrocarbon recep ( 754) 874 221.0 3.7e-55 gi|68349481|gb|AAY96634.1| aryl hydrocarbon recept ( 691) 812 205.9 1.2e-50 gi|56406590|gb|AAV87644.1| Aryl hydrocarbon recept ( 622) 810 205.3 1.6e-50 gi|19073078|gb|AAL84708.1|AF443441_1 aryl hydrocar ( 680) 805 204.2 3.9e-50 gi|119571380|gb|EAW50995.1| hCG1985585, isoform CR ( 715) 776 197.1 5.4e-48 gi|119571377|gb|EAW50992.1| hCG2044128 [Homo sapie ( 719) 776 197.1 5.5e-48 gi|11244871|gb|AAG33381.1| dioxin receptor repress ( 715) 774 196.6 7.6e-48 gi|182888377|gb|AAI60162.1| Aryl-hydrocarbon recep ( 719) 774 196.6 7.6e-48 gi|62739071|gb|AAX98236.1| aryl hydrocarbon recept ( 550) 757 192.4 1.1e-46 gi|169158285|emb|CAQ15659.1| aryl-hydrocarbon rece ( 573) 756 192.2 1.3e-46 gi|190339004|gb|AAI63123.1| Aryl-hydrocarbon recep ( 573) 756 192.2 1.3e-46 gi|62739073|gb|AAX98237.1| aryl hydrocarbon recept ( 573) 756 192.2 1.3e-46 gi|126320856|ref|XP_001368705.1| PREDICTED: simila ( 759) 687 175.5 1.9e-41 gi|27348124|dbj|BAC45237.1| Ah receptor [Cricetulu ( 941) 664 169.9 1.1e-39 gi|25089567|sp|O02747.1|AHR_RABIT RecName: Full=Ar ( 847) 660 168.9 2e-39 gi|9438131|gb|AAF87578.1|AF275721_1 AH receptor [M ( 920) 659 168.7 2.5e-39 gi|533324|dbj|BAA03857.1| Ah receptor [Homo sapien ( 808) 652 166.9 7.4e-39 gi|3041653|sp|P35869.2|AHR_HUMAN RecName: Full=Ary ( 848) 652 167.0 7.7e-39 gi|9188539|dbj|BAA99559.1| arylhydrocarbon recepto ( 920) 651 166.7 9.7e-39 gi|109067295|ref|XP_001103903.1| PREDICTED: aryl h ( 877) 649 166.2 1.3e-38 gi|194209694|ref|XP_001496597.2| PREDICTED: simila ( 947) 645 165.3 2.7e-38 gi|149641357|ref|XP_001514645.1| PREDICTED: simila ( 843) 643 164.8 3.5e-38 gi|66132539|gb|AAY42958.1| aryl hydrocarbon recept ( 940) 643 164.8 3.8e-38 gi|190338432|gb|AAI63508.1| Aryl hydrocarbon recep ( 940) 643 164.8 3.8e-38 gi|55275963|gb|AAV49747.1| aryl hydrocarbon recept ( 836) 642 164.5 4.1e-38 gi|76662465|ref|XP_612996.2| PREDICTED: aryl hydro ( 844) 642 164.5 4.1e-38 gi|6524996|gb|AAF15279.1|AF192501_1 aryl hydrocarb ( 304) 630 161.3 1.4e-37 gi|41350639|gb|AAS00540.1| aryl hydrocarbon recept ( 947) 634 162.6 1.7e-37 gi|32469276|dbj|BAC79074.1| aryl hydrocarbon recep ( 834) 633 162.3 1.9e-37 gi|55275965|gb|AAV49748.1| aryl hydrocarbon recept ( 834) 633 162.3 1.9e-37 gi|60729645|pir||JC7993 aryl hydrocarbon receptor ( 834) 633 162.3 1.9e-37 gi|210063637|gb|ACJ06577.1| aryl hydrocarbon recep ( 306) 627 160.5 2.4e-37 gi|3561052|gb|AAC35168.1| aryl hydrocarbon recepto ( 810) 631 161.8 2.6e-37 gi|149051131|gb|EDM03304.1| rCG61977, isoform CRA_ ( 810) 631 161.8 2.6e-37 gi|149051128|gb|EDM03301.1| rCG61977, isoform CRA_ ( 815) 631 161.8 2.6e-37 gi|3561054|gb|AAC35169.1| aryl hydrocarbon recepto ( 815) 631 161.8 2.6e-37 gi|213626945|gb|AAI70445.1| Aryl hydrocarbon recep ( 834) 631 161.8 2.6e-37 gi|51870521|emb|CAH25391.1| aryl hydrocarbon recep ( 844) 631 161.8 2.6e-37 gi|118419959|gb|ABK88249.1| aryl hydrocarbon recep ( 850) 631 161.8 2.7e-37 gi|507172|gb|AAA19451.1| Ah receptor ( 853) 631 161.8 2.7e-37 >>gi|4164151|dbj|BAA37132.1| AhR repressor [Mus musculus (701 aa) initn: 1406 init1: 1406 opt: 1406 Z-score: 1847.4 bits: 350.6 E(): 3.4e-94 Smith-Waterman score: 1406; 100.000% identity (100.000% similar) in 208 aa overlap (1-208:92-299) 10 20 30 mKIAA1 APALSPEEHSYRGFPVQEGRLLLESLNGFA :::::::::::::::::::::::::::::: gi|416 LDKLSVLRLSVSYLRVKSFFQALQETCVWSAPALSPEEHSYRGFPVQEGRLLLESLNGFA 70 80 90 100 110 120 40 50 60 70 80 90 mKIAA1 LVVSAEGMIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|416 LVVSAEGMIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFG 130 140 150 160 170 180 100 110 120 130 140 150 mKIAA1 QSPHADTDNTVLGKLLRAQEGGKGLPSEYSAFLTRCFICRVRCLLDSTSGFLTMQFQGKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|416 QSPHADTDNTVLGKLLRAQEGGKGLPSEYSAFLTRCFICRVRCLLDSTSGFLTMQFQGKL 190 200 210 220 230 240 160 170 180 190 200 mKIAA1 KFLFGQKKKTPSGTALPPRLSLFCIVAPVLPSVTEMKMKSTFLKAKHRADIVVTMDSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|416 KFLFGQKKKTPSGTALPPRLSLFCIVAPVLPSVTEMKMKSTFLKAKHRADIVVTMDSRAK 250 260 270 280 290 300 gi|416 AVTSLCESELHPKLNYLAGKSNGENGISLFRGQTDRSHWARALARSSCLCLRGGPDLLDP 310 320 330 340 350 360 >>gi|123790782|sp|Q3U1U7.1|AHRR_MOUSE RecName: Full=Aryl (701 aa) initn: 1406 init1: 1406 opt: 1406 Z-score: 1847.4 bits: 350.6 E(): 3.4e-94 Smith-Waterman score: 1406; 100.000% identity (100.000% similar) in 208 aa overlap (1-208:92-299) 10 20 30 mKIAA1 APALSPEEHSYRGFPVQEGRLLLESLNGFA :::::::::::::::::::::::::::::: gi|123 LDKLSVLRLSVSYLRVKSFFQALQETCVWSAPALSPEEHSYRGFPVQEGRLLLESLNGFA 70 80 90 100 110 120 40 50 60 70 80 90 mKIAA1 LVVSAEGMIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LVVSAEGMIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFG 130 140 150 160 170 180 100 110 120 130 140 150 mKIAA1 QSPHADTDNTVLGKLLRAQEGGKGLPSEYSAFLTRCFICRVRCLLDSTSGFLTMQFQGKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 QSPHADTDNTVLGKLLRAQEGGKGLPSEYSAFLTRCFICRVRCLLDSTSGFLTMQFQGKL 190 200 210 220 230 240 160 170 180 190 200 mKIAA1 KFLFGQKKKTPSGTALPPRLSLFCIVAPVLPSVTEMKMKSTFLKAKHRADIVVTMDSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 KFLFGQKKKTPSGTALPPRLSLFCIVAPVLPSVTEMKMKSTFLKAKHRADIVVTMDSRAK 250 260 270 280 290 300 gi|123 AVTSLCESELHPKLNYLAGKSNGENGISLFRGQTDRSHWARALARSSCLCLRGGPDLLDP 310 320 330 340 350 360 >>gi|74185895|dbj|BAE32810.1| unnamed protein product [M (701 aa) initn: 1406 init1: 1406 opt: 1406 Z-score: 1847.4 bits: 350.6 E(): 3.4e-94 Smith-Waterman score: 1406; 100.000% identity (100.000% similar) in 208 aa overlap (1-208:92-299) 10 20 30 mKIAA1 APALSPEEHSYRGFPVQEGRLLLESLNGFA :::::::::::::::::::::::::::::: gi|741 LDKLSVLRLSVSYLRVKSFFQALQETCVWSAPALSPEEHSYRGFPVQEGRLLLESLNGFA 70 80 90 100 110 120 40 50 60 70 80 90 mKIAA1 LVVSAEGMIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LVVSAEGMIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFG 130 140 150 160 170 180 100 110 120 130 140 150 mKIAA1 QSPHADTDNTVLGKLLRAQEGGKGLPSEYSAFLTRCFICRVRCLLDSTSGFLTMQFQGKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 QSPHADTDNTVLGKLLRAQEGGKGLPSEYSAFLTRCFICRVRCLLDSTSGFLTMQFQGKL 190 200 210 220 230 240 160 170 180 190 200 mKIAA1 KFLFGQKKKTPSGTALPPRLSLFCIVAPVLPSVTEMKMKSTFLKAKHRADIVVTMDSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KFLFGQKKKTPSGTALPPRLSLFCIVAPVLPSVTEMKMKSTFLKAKHRADIVVTMDSRAK 250 260 270 280 290 300 gi|741 AVTSLCESELHPKLNYLAGKSNGENGISLFRGQTDRSHWARALARSSCLCLRGGPDLLDP 310 320 330 340 350 360 >>gi|81864909|sp|Q75NT5.1|AHRR_RAT RecName: Full=Aryl hy (701 aa) initn: 1387 init1: 1387 opt: 1387 Z-score: 1822.4 bits: 345.9 E(): 8.5e-93 Smith-Waterman score: 1387; 98.558% identity (99.519% similar) in 208 aa overlap (1-208:92-299) 10 20 30 mKIAA1 APALSPEEHSYRGFPVQEGRLLLESLNGFA :::::::.:: ::::::::::::::::::: gi|818 LDKLSVLRLSVSYLRVKSFFQALQETCVWSAPALSPEDHSSRGFPVQEGRLLLESLNGFA 70 80 90 100 110 120 40 50 60 70 80 90 mKIAA1 LVVSAEGMIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 LVVSAEGMIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFG 130 140 150 160 170 180 100 110 120 130 140 150 mKIAA1 QSPHADTDNTVLGKLLRAQEGGKGLPSEYSAFLTRCFICRVRCLLDSTSGFLTMQFQGKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 QSPHADTDNTVLGKLLRAQEGGKGLPSEYSAFLTRCFICRVRCLLDSTSGFLTMQFQGKL 190 200 210 220 230 240 160 170 180 190 200 mKIAA1 KFLFGQKKKTPSGTALPPRLSLFCIVAPVLPSVTEMKMKSTFLKAKHRADIVVTMDSR ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|818 KFLFGQKKKTPSGTALPPRLSLFCIVAPVLPSVTEMKMKSAFLKAKHRADIVVTMDSRAK 250 260 270 280 290 300 gi|818 AVTSLCESELHPKLNYLAGRSNGENVISLFRGQTDRSHWTRALARSSCLCLRGGPDLLDP 310 320 330 340 350 360 >>gi|110002637|gb|AAI18535.1| Ahrr protein [Mus musculus (573 aa) initn: 1167 init1: 1167 opt: 1167 Z-score: 1534.0 bits: 292.3 E(): 9.8e-77 Smith-Waterman score: 1167; 100.000% identity (100.000% similar) in 171 aa overlap (38-208:1-171) 10 20 30 40 50 60 mKIAA1 EHSYRGFPVQEGRLLLESLNGFALVVSAEGMIFYASATIVDYLGFHQTDVMHQNIYDYIH :::::::::::::::::::::::::::::: gi|110 MIFYASATIVDYLGFHQTDVMHQNIYDYIH 10 20 30 70 80 90 100 110 120 mKIAA1 VDDRQDFCRQLHWAMDPPQVVFGQSPHADTDNTVLGKLLRAQEGGKGLPSEYSAFLTRCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|110 VDDRQDFCRQLHWAMDPPQVVFGQSPHADTDNTVLGKLLRAQEGGKGLPSEYSAFLTRCF 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 ICRVRCLLDSTSGFLTMQFQGKLKFLFGQKKKTPSGTALPPRLSLFCIVAPVLPSVTEMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|110 ICRVRCLLDSTSGFLTMQFQGKLKFLFGQKKKTPSGTALPPRLSLFCIVAPVLPSVTEMK 100 110 120 130 140 150 190 200 mKIAA1 MKSTFLKAKHRADIVVTMDSR ::::::::::::::::::::: gi|110 MKSTFLKAKHRADIVVTMDSRAKAVTSLCESELHPKLNYLAGKSNGENGISLFRGQTDRS 160 170 180 190 200 210 >>gi|194224067|ref|XP_001490968.2| PREDICTED: similar to (783 aa) initn: 1115 init1: 504 opt: 1114 Z-score: 1462.3 bits: 279.5 E(): 9.6e-73 Smith-Waterman score: 1114; 82.000% identity (94.500% similar) in 200 aa overlap (11-208:171-370) 10 20 30 40 mKIAA1 APALSPEEHSYRGFPVQEGRLLLESLNGFALVVSAEGMIF ..: : :::::::::.::::::::::::: gi|194 LRVKSFFQALQEKCPWQPAAGAPLPGDGGLHEGSSVLEGRLLLESLHGFALVVSAEGMIF 150 160 170 180 190 200 50 60 70 80 90 mKIAA1 YASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFGQSPHADT-DN ::::::.::::::::::::::::::::::::::::::::::::::::: :: ...: .. gi|194 YASATIMDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVCGQPLRSETGED 210 220 230 240 250 260 100 110 120 130 140 150 mKIAA1 TVLGKLLRAQEGGKGLPSEYSAFLTRCFICRVRCLLDSTSGFLTMQFQGKLKFLFGQKKK .:::.:::::::: : :.::::::::::.::::::::::::::::::::::.::::::.: gi|194 AVLGRLLRAQEGGAGSPTEYSAFLTRCFVCRVRCLLDSTSGFLTMQFQGKLQFLFGQKRK 270 280 290 300 310 320 160 170 180 190 200 mKIAA1 TPSGTALPPRLSLFCIVAPVL-PSVTEMKMKSTFLKAKHRADIVVTMDSR .::::.:::::::::::.::: :::.::::::.::.::::.:: .:::.. gi|194 APSGTVLPPRLSLFCIVVPVLLPSVAEMKMKSAFLRAKHRVDISATMDTKAKTTTSLCES 330 340 350 360 370 380 gi|194 ELHGKPSYLAGRSNGENSISVFRTQTDAGHWARVPARASCLCLRGGSDLIFDPEGAAGDR 390 400 410 420 430 440 >>gi|162423760|gb|ABX89616.1| aryl hydrocarbon receptor (697 aa) initn: 621 init1: 527 opt: 1099 Z-score: 1443.3 bits: 275.8 E(): 1.1e-71 Smith-Waterman score: 1099; 79.147% identity (89.100% similar) in 211 aa overlap (1-208:93-303) 10 20 mKIAA1 APALSPEEHS-YRGFPVQEGRLLLESLNGF : : :: . : : :::::::::::: gi|162 KLSVLRLSVSYLRVKSFFQVVQEQSSRQPAAGAPSPGDSCPLAGSAVLEGRLLLESLNGF 70 80 90 100 110 120 30 40 50 60 70 80 mKIAA1 ALVVSAEGMIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVF :::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|162 ALVVSAEGTIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVF 130 140 150 160 170 180 90 100 110 120 130 140 mKIAA1 GQSPHADT-DNTVLGKLLRAQEGGKGLPSEYSAFLTRCFICRVRCLLDSTSGFLTMQFQG ::.: .: :...::.:::::: : : :.::::::::::::::::::::::::::::::: gi|162 GQAPPLETGDDAILGRLLRAQEWGTGTPTEYSAFLTRCFICRVRCLLDSTSGFLTMQFQG 190 200 210 220 230 240 150 160 170 180 190 200 mKIAA1 KLKFLFGQKKKTPSGTALPPRLSLFCIVAPVL-PSVTEMKMKSTFLKAKHRADIVVTMDS :::::::::::.:::. ::::::::::.:::: ::..::::.:..:.:: ::: ..: :. gi|162 KLKFLFGQKKKAPSGAMLPPRLSLFCIAAPVLLPSAAEMKMRSALLRAKPRADTAATADA 250 260 270 280 290 300 mKIAA1 R . gi|162 KVKATTSLCESELHGKPNYSAGRSSRESGVLVLREQTDAGRWAQVPARAPCLCLRGGPDL 310 320 330 340 350 360 >>gi|189027651|sp|A9YTQ3.2|AHRR_HUMAN RecName: Full=Aryl (701 aa) initn: 621 init1: 527 opt: 1099 Z-score: 1443.2 bits: 275.8 E(): 1.1e-71 Smith-Waterman score: 1099; 79.147% identity (89.100% similar) in 211 aa overlap (1-208:97-307) 10 20 mKIAA1 APALSPEEHS-YRGFPVQEGRLLLESLNGF : : :: . : : :::::::::::: gi|189 KLSVLRLSVSYLRVKSFFQVVQEQSSRQPAAGAPSPGDSCPLAGSAVLEGRLLLESLNGF 70 80 90 100 110 120 30 40 50 60 70 80 mKIAA1 ALVVSAEGMIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVF :::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 ALVVSAEGTIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVF 130 140 150 160 170 180 90 100 110 120 130 140 mKIAA1 GQSPHADT-DNTVLGKLLRAQEGGKGLPSEYSAFLTRCFICRVRCLLDSTSGFLTMQFQG ::.: .: :...::.:::::: : : :.::::::::::::::::::::::::::::::: gi|189 GQAPPLETGDDAILGRLLRAQEWGTGTPTEYSAFLTRCFICRVRCLLDSTSGFLTMQFQG 190 200 210 220 230 240 150 160 170 180 190 200 mKIAA1 KLKFLFGQKKKTPSGTALPPRLSLFCIVAPVL-PSVTEMKMKSTFLKAKHRADIVVTMDS :::::::::::.:::. ::::::::::.:::: ::..::::.:..:.:: ::: ..: :. gi|189 KLKFLFGQKKKAPSGAMLPPRLSLFCIAAPVLLPSAAEMKMRSALLRAKPRADTAATADA 250 260 270 280 290 300 mKIAA1 R . gi|189 KVKATTSLCESELHGKPNYSAGRSSRESGVLVLREQTDAGRWAQVPARAPCLCLRGGPDL 310 320 330 340 350 360 >>gi|149638618|ref|XP_001514133.1| PREDICTED: similar to (638 aa) initn: 953 init1: 562 opt: 1012 Z-score: 1329.3 bits: 254.6 E(): 2.5e-65 Smith-Waterman score: 1012; 79.570% identity (93.548% similar) in 186 aa overlap (24-208:34-218) 10 20 30 40 50 mKIAA1 APALSPEEHSYRGFPVQEGRLLLESLNGFALVVSAEGMIFYASATIVDYLGFH ::::::::::::::::::::.::::::::: gi|149 PSLFRGGAFQKESISRDELGVGQEGVPAGAESLNGFALVVSAEGMIFYASSTIVDYLGFH 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA1 QTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFGQSPHADTDNTVLGKLLRAQEGGK :::::::::::::::::::::::::::::.:::..::: ...:.. .:.:::.::: .. gi|149 QTDVMHQNIYDYIHVDDRQDFCRQLHWAMNPPQLAFGQPLQTETEDCILSKLLKAQECNS 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA1 GLPSEYSAFLTRCFICRVRCLLDSTSGFLTMQFQGKLKFLFGQKKKTPSGTALPPRLSLF :.:::.::::::::::::::::::::::::::::::::::::::::::. :::::::: gi|149 -TPTEYSVFLTRCFICRVRCLLDSTSGFLTMQFQGKLKFLFGQKKKTPSGALLPPRLSLF 130 140 150 160 170 180 180 190 200 mKIAA1 CIVAPVL-PSVTEMKMKSTFLKAKHRADIVVTMDSR :::.:.: :::.::::::..:.:::::: .. : . gi|149 CIVVPILLPSVAEMKMKSVLLRAKHRADAAAPTDPKAKALAGLCESEFHGRTNFQGAKNS 190 200 210 220 230 240 gi|149 GENGISLFKIKSNEDEWLWVQANGQRFYRSGCSDCAVAPQPTANLRAREEGEPLPPSHST 250 260 270 280 290 300 >>gi|224045945|ref|XP_002190162.1| PREDICTED: similar to (757 aa) initn: 863 init1: 863 opt: 983 Z-score: 1290.1 bits: 247.6 E(): 3.8e-63 Smith-Waterman score: 983; 74.359% identity (93.333% similar) in 195 aa overlap (16-208:107-300) 10 20 30 40 mKIAA1 APALSPEEHSYRGFPVQEGRLLLESLNGFALVVSAEGMIFYASAT :::: :::::::::::::::.:::::::.: gi|224 KSFFQAIQEKHFKKQDGQTIKEDNISNKTAVQEGGLLLESLNGFALVVSADGMIFYASST 80 90 100 110 120 130 50 60 70 80 90 100 mKIAA1 IVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFGQSPHADT-DNTVLGK :::::::::::::::::::::::::::::::::::::.:::.. ::. ...: .. .:.: gi|224 IVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMNPPQMLSGQQLQSETGEEYILSK 140 150 160 170 180 190 110 120 130 140 150 160 mKIAA1 LLRAQEGGKGLPSEYSAFLTRCFICRVRCLLDSTSGFLTMQFQGKLKFLFGQKKKTPSGT :..:::. . . ..::.:::::::::::::::::::::::::::::::::::.::. ::: gi|224 LFKAQENDS-MTTDYSSFLTRCFICRVRCLLDSTSGFLTMQFQGKLKFLFGQRKKSSSGT 200 210 220 230 240 250 170 180 190 200 mKIAA1 ALPPRLSLFCIVAPVL-PSVTEMKMKSTFLKAKHRADIVVTMDSR .:::.:::::::.:.: :::::::::: ...:::.:: ... ... gi|224 VLPPQLSLFCIVVPLLLPSVTEMKMKSLLVRAKHKADDAAAANTKNTFKSYGAYSTELYG 260 270 280 290 300 310 gi|224 RNNHHEGAAFTNALQIAENQIKAKNNGENGISLVKVQTNEDHWVWVQANTQLLYRSGCSE 320 330 340 350 360 370 208 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 08:10:34 2009 done: Fri Mar 13 08:15:23 2009 Total Scan time: 686.430 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]