FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4020.ptfa, 391 aa vs ./tmplib.26680 library 1768626 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.8449+/-0.00486; mu= 13.5578+/- 0.326 mean_var=103.3169+/-23.612, 0's: 0 Z-trim: 5 B-trim: 0 in 0/36 Lambda= 0.1262 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0158 ( 367 res) mpm05359 ( 367) 1268 241 8.1e-65 mKIAA0991 ( 605 res) mph02064 ( 605) 1033 199 8.3e-52 mKIAA0128 ( 449 res) mfj19346 ( 449) 964 186 4.2e-48 mKIAA0202 ( 470 res) mbh00446 ( 470) 933 180 2.2e-46 mKIAA4169 ( 281 res) mbg08918 ( 281) 729 143 2.4e-35 >>mKIAA0158 ( 367 res) mpm05359 (367 aa) initn: 1014 init1: 631 opt: 1268 Z-score: 1256.0 bits: 241.1 E(): 8.1e-65 Smith-Waterman score: 1268; 58.876% identity (61.231% ungapped) in 338 aa overlap (19-348:22-354) 10 20 30 40 50 mKIAA4 AEERSVNCGTMAQPKNLEGYVGFANLPNQVYRKSVKRGFEFTLMVVGESGLGKSTLI ::::::::::::.:::::.:::::::::::::::::::: mKIAA0 TGKSRKMSKQQPTQFINPETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLI 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA4 NSLFLTDLYSPEY--PGPSHRIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGFGDAVDNSN ::::::::: :: :: ...:..:::.: : : :.: ::.: ::.:::::.:::.. . mKIAA0 NSLFLTDLY-PERIIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINCRD 70 80 90 100 110 120 130 140 150 160 170 mKIAA4 CWQPVIDYIDSKFEDYLNAESRVNRRQMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLHE :.. .:.::: .:: ::. :: .:::.. ::::.::.:::.: ::::::::. ::: .:. mKIAA0 CFKTIISYIDEQFERYLHDESGLNRRHIIDNRVHCCFYFISPFGHGLKPLDVAFMKAIHN 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA4 KVNIIPLIAKADTLTPEECQQFKKQIMKEIQEHKIKIYEFP--ETD-DEEENKLVKKIKD ::::.:.:::::::: .: ...::.:. ::.::.::::..: :.: ::. .. .. .: mKIAA0 KVNIVPVIAKADTLTLKERERLKKRILDEIEEHSIKIYHLPDAESDEDEDFKEQTRLLKA 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA4 RLPLAVVGSNTIIEVNGKRVRGRQYPWGVAEVENGEHCDFTILRNMLIRTHMQDLKDVTN .:..::::: .::..::.:::: :::::.:::: :: :: ::.::: ::::::..::. mKIAA0 SIPFSVVGSNQLIEAKGKKVRGRLYPWGVVEVENPEHNDFLKLRTMLI-THMQDLQEVTQ 240 250 260 270 280 290 300 310 320 330 340 mKIAA4 NVHYENYRSRKLAAVTYNGVDNNKNKGQLTKSPLAQMEEERR--EHVAKMK-KMEMEMEQ ..::::.::..: . ... :: :. : . : :: : .:.:. .:.:.:. mKIAA0 DLHYENFRSERLKRGGRKVENEDMNKDQIL---LEKEAELRRMQEMIARMQAQMQMQMQG 300 310 320 330 340 350 350 360 370 380 390 mKIAA4 VFEMKVKEKVQKLKDSEAEVISLISSLSVFLLNKFKLYLYIL mKIAA0 GDSDSGALGQHV 360 >>mKIAA0991 ( 605 res) mph02064 (605 aa) initn: 1016 init1: 316 opt: 1033 Z-score: 1022.4 bits: 198.6 E(): 8.3e-52 Smith-Waterman score: 1033; 48.220% identity (49.175% ungapped) in 309 aa overlap (19-321:297-605) 10 20 30 40 mKIAA4 AEERSVNCGTMAQPKNLEGYVGFANLPNQVYRKSVKRGFEFTLMVVGE ::::. .. .:. ::..:.::::..::::. mKIAA0 SCVGDMADNPRDAMLKQAPASRNEKAPMEFGYVGIDSILEQMRRKAMKQGFEFNIMVVGQ 270 280 290 300 310 320 50 60 70 80 90 100 mKIAA4 SGLGKSTLINSLFLTDLYSPEY-PGPSHRIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGF ::::::::::.:: . . : .:: ::..... :.: ::.. ::..::::: mKIAA0 SGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTVIDTPGF 330 340 350 360 370 380 110 120 130 140 150 160 mKIAA4 GDAVDNSNCWQPVIDYIDSKFEDYLNAESRVNRRQ-MPDNRVQCCLYFIAPSGHGLKPLD :: ..: :::::.. .:....: ::. : .::.. .::.::.:::::: .::.:.::: mKIAA0 GDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRVHCCLYFIPATGHSLRPLD 390 400 410 420 430 440 170 180 190 200 210 220 mKIAA4 IEFMKRLHEKVNIIPLIAKADTLTPEECQQFKKQIMKEIQEHKIKIYEFPETDDEEENKL ::::::: . :::.:.:::::::: :: ::..: .. . : .: : :.. :..: mKIAA0 IEFMKRLSKVVNIVPVIAKADTLTLEERVYFKQRITADLLSNGIDVYPQKEFDEDAEDRL 450 460 470 480 490 500 230 240 250 260 270 280 mKIAA4 V-KKIKDRLPLAVVGSNTIIEVNGKRVRGRQYPWGVAEVENGEHCDFTILRNMLIRTHMQ : .:... .:.:::::. .:::::. ::. ::. :::: ::.:. ::..::::::: mKIAA0 VNEKFREMIPFAVVGSDHEYQVNGKRILGRKTKWGTIEVENTTHCEFAYLRDLLIRTHMQ 510 520 530 540 550 560 290 300 310 320 330 340 mKIAA4 DLKDVTNNVHYENYRSRKLA---AVTYNGVDNNKNKGQLTKSPLAQMEEERREHVAKMKK ..::.:.:.:.: :: ..: .. ::.... . .. mKIAA0 NIKDITSNIHFEAYRVKRLNEGNSAMANGIEKEPEAQEM 570 580 590 600 350 360 370 380 390 mKIAA4 MEMEMEQVFEMKVKEKVQKLKDSEAEVISLISSLSVFLLNKFKLYLYIL >>mKIAA0128 ( 449 res) mfj19346 (449 aa) initn: 906 init1: 300 opt: 964 Z-score: 956.0 bits: 185.9 E(): 4.2e-48 Smith-Waterman score: 964; 41.667% identity (43.662% ungapped) in 372 aa overlap (1-369:29-386) 10 20 30 mKIAA4 AEERSVNCGTMAQPKNLEGYVGFANLPNQVYR :.. . .: :. : : :.::: .::.:. mKIAA0 SVSCAAAPVAEAPEAALADQGAMAAADIARQVGEDCRTV--P--LAGHVGFDSLPDQLVN 10 20 30 40 50 40 50 60 70 80 90 mKIAA4 KSVKRGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPG-PSHRIKKTVQVEQSKVLIK :::..:: :... :::.:::::::...:: : .. : :. . . ::.... .. mKIAA0 KSVSQGFCFNILCVGETGLGKSTLMDTLFNT-----KFEGEPATHTQPGVQLQSNTYDLQ 60 70 80 90 100 110 100 110 120 130 140 mKIAA4 EGGVQLLLTIVDTPGFGDAVDNSNCWQPVIDYIDSKFEDYLNAESRVNR--RQMPDNRVQ :..: : ::::.: :::: ... . ..:....::..:: ::. : .. : ... :.:.. mKIAA0 ESNVGLKLTIVSTVGFGDQINKEDSYKPIVEFIDAQFEAYLQEELKIRRVLHSYHDSRIH 120 130 140 150 160 170 150 160 170 180 190 200 mKIAA4 CCLYFIAPSGHGLKPLDIEFMKRLHEKVNIIPLIAKADTLTPEECQQFKKQIMKEIQEHK :::::::.::.:: ::. ::.: ::::::.:::.:... : .:: .: .:. . mKIAA0 VCLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPVIAKSDAISKSELAKFKIKITSELVSNG 180 190 200 210 220 230 210 220 230 240 250 260 mKIAA4 IKIYEFPETDDEEENKLVKKIKDRLPLAVVGSNTIIEVNGKRVRGRQYPWGVAEVENGEH ..::.:: :::: ... .. .::.:::::. .....: .:.::::::...::: : mKIAA0 VQIYQFP-TDDESVSEINGTMNAHLPFAVVGSTEEVKIGNKMMRARQYPWGTVQVENEAH 240 250 260 270 280 290 270 280 290 300 310 320 mKIAA4 CDFTILRNMLIRTHMQDLKDVTNNVHYENYRSRKLAAVTYNGVDNNKNKGQLTKSPLAQM :::. ::.::::..:.::.. :. ::: :: :: . .. .: ... .: .. . mKIAA0 CDFVKLREMLIRVNMEDLREQTHARHYELYRRCKLEEMGFKDTDPDSKPFSLQET----Y 300 310 320 330 340 330 340 350 360 370 380 mKIAA4 EEERREHVAKMKKMEMEMEQVFEMKVKEKVQKLKDSEAEVISLISSLSVFLLNKFKLYLY : .: : .....: : ::.:.: ..:::: .::..: :. mKIAA0 EAKRNEFLGELQKKEEEMRQMFVQRVKEKEAELKEAEKELHEKFDRLKKLHQEEKKKLED 350 360 370 380 390 400 390 mKIAA4 IL mKIAA0 KKKCLDEEMNAFKQRKAAAELLQSQGSQAGGSQTLKRDKEKKN 410 420 430 440 >>mKIAA0202 ( 470 res) mbh00446 (470 aa) initn: 901 init1: 309 opt: 933 Z-score: 925.2 bits: 180.3 E(): 2.2e-46 Smith-Waterman score: 933; 43.658% identity (45.122% ungapped) in 339 aa overlap (33-369:78-407) 10 20 30 40 50 60 mKIAA4 ERSVNCGTMAQPKNLEGYVGFANLPNQVYRKSVKRGFEFTLMVVGESGLGKSTLINSLFL ::: .:: :... :::.:.::.::.:.:: mKIAA0 NASRTQSLSPGACPWAAMLGLTASLTSWSVKSVTQGFSFNILCVGETGIGKATLMNTLFN 50 60 70 80 90 100 70 80 90 100 110 120 mKIAA4 TDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQPVID : . . : ::. .. :... . ..:..:.: :::::. :::: ..... ..:..: mKIAA0 TTFETEE---ASHH-EECVRLRPQTYDLQESNVHLKLTIVDAVGFGDQINKDDSYRPIVD 110 120 130 140 150 160 130 140 150 160 170 180 mKIAA4 YIDSKFEDYLNAESRVNRR--QMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLHEKVNII :::..::.::. : .. : .. :.:.. :::::.:.::.:: ::. ::.: ::::: mKIAA0 YIDAQFENYLQEELKIRRSLFDYHDTRIHVCLYFITPTGHSLKSLDLVTMKKLDSKVNII 170 180 190 200 210 220 190 200 210 220 230 240 mKIAA4 PLIAKADTLTPEECQQFKKQIMKEIQEHKIKIYEFPETDDEEENKLVKKIKDRLPLAVVG :.::::::.. : ..:: .:: :. . ..::.:: :::: .. .. .::.:::: mKIAA0 PIIAKADTISKSELHKFKIKIMGELVSNGVQIYQFP-TDDEAVAEINAVMNAHLPFAVVG 230 240 250 260 270 280 250 260 270 280 290 300 mKIAA4 SNTIIEVNGKRVRGRQYPWGVAEVENGEHCDFTILRNMLIRTHMQDLKDVTNNVHYENYR :. ..:..: ::.:::::::..::: .::::. ::.::::..:.::.. :.. ::: :: mKIAA0 STEEVKVGNKLVRARQYPWGVVQVENENHCDFVKLREMLIRVNMEDLREQTHSRHYELYR 290 300 310 320 330 340 310 320 330 340 350 360 mKIAA4 SRKLAAVTYNGVDNNKNKGQLTKSPLAQMEEERREHVAKMKKMEMEMEQVFEMKVKEKVQ :: . .. :.... .: .. .: .:.: ...... : ::.:.: :::: mKIAA0 RCKLEEMGFQDSDGDSQPFSLQET----YEAKRKEFLSELQRKEEEMRQMFVNKVKETEL 350 360 370 380 390 370 380 390 mKIAA4 KLKDSEAEVISLISSLSVFLLNKFKLYLYIL .::..: :. mKIAA0 ELKEKERELHEKFEHLKRIHQEEKRKVEEKRRELEEETNAFNCRKAAMEALQSQALHATS 400 410 420 430 440 450 >>mKIAA4169 ( 281 res) mbg08918 (281 aa) initn: 506 init1: 333 opt: 729 Z-score: 727.0 bits: 142.8 E(): 2.4e-35 Smith-Waterman score: 729; 48.416% identity (49.309% ungapped) in 221 aa overlap (47-263:37-257) 20 30 40 50 60 70 mKIAA4 LEGYVGFANLPNQVYRKSVKRGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYP-GPSH :.::::::::.:.:: ... . . mKIAA4 EFCKRTGGLCSSGGRCGACLPFSVSLSHAAGQSGLGKSTLVNTLFKSQVSRKASSWNREE 10 20 30 40 50 60 80 90 100 110 120 130 mKIAA4 RIKKTVQVEQSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQPVIDYIDSKFEDYLNAE .: :::... .:.::::.. ::..::::::: ..: :::.:. ::. ..: .:. : mKIAA4 KIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEE 70 80 90 100 110 120 140 150 160 170 180 190 mKIAA4 SRVNRRQ-MPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLHEKVNIIPLIAKADTLTPEEC . :.. .::.::.::::::.:.::.:.:::.::::.: . :::::.::::::.: :: mKIAA4 VNIARKKRIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEEK 130 140 150 160 170 180 200 210 220 230 240 250 mKIAA4 QQFKKQIMKEIQEHKIKIYEFPETDDEEENKLVK-KIK-DRLPLAVVGSNTIIEVNGKRV ..::... ::.. . :..: : :.. :.: . ::. . .:.:::::. .:::::: mKIAA4 SEFKQRVRKELEVNGIEFYPQKEFDEDLEDKTENDKIRQESMPFAVVGSDKEYQVNGKRV 190 200 210 220 230 240 260 270 280 290 300 310 mKIAA4 RGRQYPWGVAEVENGEHCDFTILRNMLIRTHMQDLKDVTNNVHYENYRSRKLAAVTYNGV ::. :::. : mKIAA4 LGRKTPWGIIEGNPAHLPEGQAARRNRTDRRKEQL 250 260 270 280 391 residues in 1 query sequences 1768626 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:59:24 2006 done: Mon Mar 27 10:59:25 2006 Scan time: 0.610 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]