# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj24085.fasta.nr -Q ../query/mKIAA1562.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1562, 1135 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7916819 sequences Expectation_n fit: rho(ln(x))= 5.5390+/-0.000186; mu= 12.4835+/- 0.010 mean_var=80.5887+/-15.630, 0's: 26 Z-trim: 59 B-trim: 30 in 1/65 Lambda= 0.142869 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|30354448|gb|AAH52198.1| Protocadherin 18 [Mus m (1134) 7445 1545.1 0 gi|148703243|gb|EDL35190.1| protocadherin 18, isof (1134) 7440 1544.0 0 gi|17864896|gb|AAL47095.1|AF416735_1 protocadherin (1134) 7439 1543.8 0 gi|209573226|sp|Q8VHR0.2|PCD18_MOUSE RecName: Full (1134) 7434 1542.8 0 gi|149064852|gb|EDM15003.1| protocadherin 18 (pred (1134) 7301 1515.4 0 gi|197245732|gb|AAI68716.1| Unknown (protein for M (1135) 7289 1512.9 0 gi|158257468|dbj|BAF84707.1| unnamed protein produ (1134) 7006 1454.6 0 gi|212276496|sp|Q9HCL0.3|PCD18_HUMAN RecName: Full (1135) 6994 1452.1 0 gi|209573159|sp|A7MB46.1|PCD18_BOVIN RecName: Full (1134) 6985 1450.2 0 gi|194208449|ref|XP_001915698.1| PREDICTED: protoc (1128) 6952 1443.4 0 gi|119625546|gb|EAX05141.1| protocadherin 18, isof (1092) 6712 1394.0 0 gi|119625545|gb|EAX05140.1| protocadherin 18, isof (1093) 6700 1391.5 0 gi|109075676|ref|XP_001086925.1| PREDICTED: simila (1124) 6344 1318.1 0 gi|54311358|gb|AAH84899.1| Protocadherin 18 [Xenop (1145) 5817 1209.5 0 gi|114596066|ref|XP_001135980.1| PREDICTED: protoc ( 914) 5706 1186.6 0 gi|119625544|gb|EAX05139.1| protocadherin 18, isof ( 872) 5412 1125.9 0 gi|6808080|emb|CAB70755.1| hypothetical protein [H ( 709) 4397 916.7 0 gi|47218475|emb|CAG03747.1| unnamed protein produc (1259) 4342 905.5 0 gi|47209841|emb|CAF96670.1| unnamed protein produc (1203) 3991 833.2 0 gi|164604870|dbj|BAF96395.2| protocadherin 18 [Dan (1150) 3963 827.4 0 gi|161339215|gb|ABX64360.1| protocadherin 18 [Dani (1123) 3921 818.7 0 gi|148703242|gb|EDL35189.1| protocadherin 18, isof ( 572) 3805 794.6 0 gi|42542548|gb|AAH66445.1| Wu:fq40g12 [Danio rerio (1001) 2288 482.1 6.8e-133 gi|115292041|gb|AAI21911.1| Protocadherin 10 [Xeno (1009) 2205 465.0 9.7e-128 gi|194391346|dbj|BAG60791.1| unnamed protein produ ( 346) 2193 462.2 2.3e-127 gi|47212024|emb|CAF96450.1| unnamed protein produc ( 969) 2168 457.3 1.9e-125 gi|125829617|ref|XP_689835.2| PREDICTED: protocadh (1137) 2146 452.9 4.9e-124 gi|49257671|gb|AAH74360.1| MGC84237 protein [Xenop ( 997) 2129 449.3 5e-123 gi|47218472|emb|CAG03744.1| unnamed protein produc (1022) 2088 440.9 1.8e-120 gi|47228024|emb|CAF97653.1| unnamed protein produc (1074) 2066 436.3 4.3e-119 gi|224043452|ref|XP_002199103.1| PREDICTED: protoc ( 997) 2048 432.6 5.3e-118 gi|143330521|gb|ABO93196.1| paraxial protocadherin ( 998) 2017 426.2 4.4e-116 gi|143330542|gb|ABO93197.1| protocadherin 19 [Gall (1086) 2012 425.2 9.7e-116 gi|149640037|ref|XP_001512989.1| PREDICTED: simila (1098) 2012 425.2 9.8e-116 gi|47682330|gb|AAH70019.1| Protocadherin 10b [Dani (1026) 2003 423.3 3.4e-115 gi|28189085|dbj|BAC56231.1| protocadherin 10 [Dani (1026) 2003 423.3 3.4e-115 gi|47227015|emb|CAG05907.1| unnamed protein produc ( 940) 2001 422.9 4.2e-115 gi|157426845|ref|NP_065817.2| protocadherin 19 iso (1100) 1973 417.2 2.6e-113 gi|73989071|ref|XP_857178.1| PREDICTED: similar to (1039) 1970 416.5 3.8e-113 gi|149055462|gb|EDM07046.1| protocadherin 19 (pred (1098) 1969 416.4 4.6e-113 gi|194680343|ref|XP_602429.4| PREDICTED: similar t (1098) 1966 415.7 7e-113 gi|168273220|dbj|BAG10449.1| protocadherin-19 prec (1101) 1966 415.7 7e-113 gi|157426851|ref|NP_001098716.1| protocadherin 19 (1097) 1964 415.3 9.3e-113 gi|57112567|ref|XP_549133.1| PREDICTED: similar to (1098) 1964 415.3 9.3e-113 gi|120537643|gb|AAI29244.1| Wu:fc83e05 protein [Da (1078) 1959 414.3 1.9e-112 gi|194386128|dbj|BAG59628.1| unnamed protein produ ( 315) 1950 412.1 2.6e-112 gi|148688470|gb|EDL20417.1| mCG11037, isoform CRA_ (1098) 1956 413.7 2.9e-112 gi|77798553|gb|ABB03451.1| protocadherin PCNS [Xen ( 977) 1949 412.2 7.2e-112 gi|194228094|ref|XP_001914715.1| PREDICTED: protoc (1170) 1949 412.3 8.3e-112 gi|114596047|ref|XP_001134819.1| PREDICTED: protoc (1026) 1937 409.7 4.2e-111 >>gi|30354448|gb|AAH52198.1| Protocadherin 18 [Mus muscu (1134 aa) initn: 7445 init1: 7445 opt: 7445 Z-score: 8286.0 bits: 1545.1 E(): 0 Smith-Waterman score: 7445; 100.000% identity (100.000% similar) in 1134 aa overlap (2-1135:1-1134) 10 20 30 40 50 60 mKIAA1 PMHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 MHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA1 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA1 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA1 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSTEWALSVIIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSTEWALSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA1 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA1 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA1 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQ 780 790 800 810 820 830 850 860 870 880 890 900 mKIAA1 GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG 840 850 860 870 880 890 910 920 930 940 950 960 mKIAA1 FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 mKIAA1 QHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPASL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 QHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPASL 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 mKIAA1 DTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTNSSGTPLGTHSSVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 DTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTNSSGTPLGTHSSVQ 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 mKIAA1 PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1130 >>gi|148703243|gb|EDL35190.1| protocadherin 18, isoform (1134 aa) initn: 7440 init1: 7440 opt: 7440 Z-score: 8280.4 bits: 1544.0 E(): 0 Smith-Waterman score: 7440; 99.912% identity (100.000% similar) in 1134 aa overlap (2-1135:1-1134) 10 20 30 40 50 60 mKIAA1 PMHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA1 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA1 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA1 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSTEWALSVIIQ ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|148 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSAEWALSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA1 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA1 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA1 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQ 780 790 800 810 820 830 850 860 870 880 890 900 mKIAA1 GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG 840 850 860 870 880 890 910 920 930 940 950 960 mKIAA1 FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 mKIAA1 QHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPASL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPASL 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 mKIAA1 DTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTNSSGTPLGTHSSVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTNSSGTPLGTHSSVQ 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 mKIAA1 PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1130 >>gi|17864896|gb|AAL47095.1|AF416735_1 protocadherin 18 (1134 aa) initn: 7439 init1: 7439 opt: 7439 Z-score: 8279.3 bits: 1543.8 E(): 0 Smith-Waterman score: 7439; 99.912% identity (100.000% similar) in 1134 aa overlap (2-1135:1-1134) 10 20 30 40 50 60 mKIAA1 PMHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 MHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA1 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA1 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA1 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSTEWALSVIIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSTEWALSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA1 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA1 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA1 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQ 780 790 800 810 820 830 850 860 870 880 890 900 mKIAA1 GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG 840 850 860 870 880 890 910 920 930 940 950 960 mKIAA1 FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 mKIAA1 QHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPASL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 QHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPASL 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 mKIAA1 DTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTNSSGTPLGTHSSVQ ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|178 DTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTSSSGTPLGTHSSVQ 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 mKIAA1 PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|178 PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1130 >>gi|209573226|sp|Q8VHR0.2|PCD18_MOUSE RecName: Full=Pro (1134 aa) initn: 7434 init1: 7434 opt: 7434 Z-score: 8273.7 bits: 1542.8 E(): 0 Smith-Waterman score: 7434; 99.824% identity (100.000% similar) in 1134 aa overlap (2-1135:1-1134) 10 20 30 40 50 60 mKIAA1 PMHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 MHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA1 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA1 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA1 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSTEWALSVIIQ ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|209 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSAEWALSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA1 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA1 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA1 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQ 780 790 800 810 820 830 850 860 870 880 890 900 mKIAA1 GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG 840 850 860 870 880 890 910 920 930 940 950 960 mKIAA1 FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 mKIAA1 QHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPASL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 QHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPASL 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 mKIAA1 DTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTNSSGTPLGTHSSVQ ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|209 DTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTSSSGTPLGTHSSVQ 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 mKIAA1 PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1130 >>gi|149064852|gb|EDM15003.1| protocadherin 18 (predicte (1134 aa) initn: 7301 init1: 7301 opt: 7301 Z-score: 8125.6 bits: 1515.4 E(): 0 Smith-Waterman score: 7301; 97.354% identity (99.735% similar) in 1134 aa overlap (2-1135:1-1134) 10 20 30 40 50 60 mKIAA1 PMHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP :::.::::::::::.:::::::::::.:::::::::::::::::::::::::::::::: gi|149 MHQINTKMHFRFALSLLMAFFSHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NPSAIRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI :::::::::::::::::::::::::::::::::::::.::::::::::::::::::::.: gi|149 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGVNGRIVYSFSSHVSPKIIETFRI 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DSERGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS ::::::::::::::::::::::::.::::::::::.:::::::::::::.:::::::::: gi|149 NATLDREKRSEYSLTVIAEDKGTPNLSSVRHFTVQVNDINDNPPRFQRSQYEFVISENNS 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA1 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA1 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH :::::::::::::::::::::::::::::::::::::.:::::::::.::::::.::::: gi|149 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVVGPAMHNNTADISIPKGVESGFH 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA1 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSTEWALSVIIQ :::.:::::::::::::.::::.::::::::.::::::::::::..:: ::::::::::: gi|149 VTRLRVVDRDSGANAEFTCSIVAGNEENIFIIDPRSCDIHTNVSIDSISSTEWALSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA1 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL :::.::::::::::::::::.::::::::::::.:::::::::::::::::::::::::: gi|149 DKGNPPLHTKVLLRCMVFDYTESVTSTAMTSVSHASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA1 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA1 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQ 780 790 800 810 820 830 850 860 870 880 890 900 mKIAA1 GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG 840 850 860 870 880 890 910 920 930 940 950 960 mKIAA1 FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 mKIAA1 QHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPASL :::: ::::::::::.::::::::::::::::::::::::::::::::.::::::::::: gi|149 QHSHPGLDDDSQPAESGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMNSVFQRLLPASL 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 mKIAA1 DTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTNSSGTPLGTHSSVQ ::.:::.: :::::::::::::::::::::::::::::::::::::.::::::::::::: gi|149 DTYSECSEVDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTSSSGTPLGTHSSVQ 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 mKIAA1 PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1130 >>gi|197245732|gb|AAI68716.1| Unknown (protein for MGC:1 (1135 aa) initn: 5258 init1: 5258 opt: 7289 Z-score: 8112.2 bits: 1512.9 E(): 0 Smith-Waterman score: 7289; 97.269% identity (99.648% similar) in 1135 aa overlap (2-1135:1-1135) 10 20 30 40 50 60 mKIAA1 PMHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP :::.::::::::::.:::::::::::.:::::::::::::::::::::::::::::::: gi|197 MHQINTKMHFRFALSLLMAFFSHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 NPSAIRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI :::::::::::::::::::::::::::::::::::::.::::::::::::::::::::.: gi|197 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGVNGRIVYSFSSHVSPKIIETFRI 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 DSERGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS ::::::::::::::::::::::::.::::::::::.:::::::::::::.:::::::::: gi|197 NATLDREKRSEYSLTVIAEDKGTPNLSSVRHFTVQVNDINDNPPRFQRSQYEFVISENNS 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA1 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA1 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH :::::::::::::::::::::::::::::::::::::.:::::::::.::::::.::::: gi|197 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVVGPAMHNNTADISIPKGVESGFH 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA1 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSTEWALSVIIQ :::.:::::::::::::.::::.::::::::.::::::::::::..:: ::::::::::: gi|197 VTRLRVVDRDSGANAEFTCSIVAGNEENIFIIDPRSCDIHTNVSIDSISSTEWALSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA1 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL :::.::::::::::::::::.::::::::::::.:::::::::::::::::::::::::: gi|197 DKGNPPLHTKVLLRCMVFDYTESVTSTAMTSVSHASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA1 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 mKIAA1 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVE-VSQLLSMLH :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|197 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLH 780 790 800 810 820 830 840 850 860 870 880 890 mKIAA1 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE 840 850 860 870 880 890 900 910 920 930 940 950 mKIAA1 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQ 900 910 920 930 940 950 960 970 980 990 1000 1010 mKIAA1 QQHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPAS ::::: ::::::::::.::::::::::::::::::::::::::::::::.:::::::::: gi|197 QQHSHPGLDDDSQPAESGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMNSVFQRLLPAS 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 mKIAA1 LDTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTNSSGTPLGTHSSV :::.:::.: :::::::::::::::::::::::::::::::::::::.:::::::::::: gi|197 LDTYSECSEVDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTSSSGTPLGTHSSV 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 mKIAA1 QPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 QPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1130 >>gi|158257468|dbj|BAF84707.1| unnamed protein product [ (1134 aa) initn: 7006 init1: 7006 opt: 7006 Z-score: 7797.0 bits: 1454.6 E(): 0 Smith-Waterman score: 7006; 92.769% identity (98.236% similar) in 1134 aa overlap (2-1135:1-1134) 10 20 30 40 50 60 mKIAA1 PMHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP :::::.::::::..:::.. :.::::.:::::::::::::::::::::::::::::::: gi|158 MHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ :::.:::::: :::::::::::..::::::: :::::::::::::::::::.:::::::: gi|158 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN ::::::.::::::::::::: .:::::::::::::::::::::::::::::::::::::: gi|158 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS :.::::::::::::::::::::.:::::::.::::::::::::::::::::::::::::: gi|158 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI ::::::::: :: :::::::::::::::::::::::::::.:::::::::::::.::::: gi|158 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKI 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM :::.::::::: :::::::::::::::::::::::::::::::::::::::::::.:::: gi|158 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT ::::::.::.:::::::::::.::::::::::::::.::::::::::::::::::::::: gi|158 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS ::::::::::::::::::::.::::::.:.::::::::::::::.::::::::::::::: gi|158 NATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNS 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA1 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::.:::::::::.:::::::::::::::::::::::::::::: gi|158 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA1 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH ::::::::::::: ::: :::::::::::::::::::::::..::::::.:::::::::: gi|158 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFH 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA1 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSTEWALSVIIQ :::::..:::::.:::.::.::.::::::::.:::::::::::::.:.: ::: :::::: gi|158 VTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA1 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL :::.: :::::::.::.:.::::::::::::::.:::::::::::::::::::::::::: gi|158 DKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA1 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA1 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQ 780 790 800 810 820 830 850 860 870 880 890 900 mKIAA1 GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG 840 850 860 870 880 890 910 920 930 940 950 960 mKIAA1 FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|158 FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 mKIAA1 QHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPASL :: ::.:.::.:::..:::::::::::::::.:::.::.:::::::::::::::::: :: gi|158 QHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPSL 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 mKIAA1 DTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTNSSGTPLGTHSSVQ ::.:::.: :::::::::::: .:: :::::::::::::::::::.. : ::::::::: gi|158 DTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSVQ 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 mKIAA1 PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS ::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|158 PSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1130 >>gi|212276496|sp|Q9HCL0.3|PCD18_HUMAN RecName: Full=Pro (1135 aa) initn: 5056 init1: 5056 opt: 6994 Z-score: 7783.6 bits: 1452.1 E(): 0 Smith-Waterman score: 6994; 92.687% identity (98.150% similar) in 1135 aa overlap (2-1135:1-1135) 10 20 30 40 50 60 mKIAA1 PMHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP :::::.::::::..:::.. :.::::.:::::::::::::::::::::::::::::::: gi|212 MHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ :::.:::::: :::::::::::..::::::: :::::::::::::::::::.:::::::: gi|212 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN ::::::.::::::::::::: .:::::::::::::::::::::::::::::::::::::: gi|212 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS :.::::::::::::::::::::.:::::::.::::::::::::::::::::::::::::: gi|212 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI ::::::::: :: :::::::::::::::::::::::::::.:::::::::::::.::::: gi|212 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKI 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM :::.::::::: :::::::::::::::::::::::::::::::::::::::::::.:::: gi|212 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT ::::::.::.:::::::::::.::::::::::::::.::::::::::::::::::::::: gi|212 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS ::::::::::::::::::::.::::::.:.::::::::::::::.::::::::::::::: gi|212 NATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNS 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA1 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::.:::::::::.:::::::::::::::::::::::::::::: gi|212 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA1 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH ::::::::::::: ::: :::::::::::::::::::::::..::::::.:::::::::: gi|212 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFH 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA1 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSTEWALSVIIQ :::::..:::::.:::.::.::.::::::::.:::::::::::::.:.: ::: :::::: gi|212 VTRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA1 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL :::.: :::::::.::.:.::::::::::::::.:::::::::::::::::::::::::: gi|212 DKGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA1 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 mKIAA1 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVE-VSQLLSMLH :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|212 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLH 780 790 800 810 820 830 840 850 860 870 880 890 mKIAA1 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|212 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE 840 850 860 870 880 890 900 910 920 930 940 950 mKIAA1 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|212 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQ 900 910 920 930 940 950 960 970 980 990 1000 1010 mKIAA1 QQHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPAS ::: ::.:.::.:::..:::::::::::::::.:::.::.:::::::::::::::::: : gi|212 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPS 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 mKIAA1 LDTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTNSSGTPLGTHSSV :::.:::.: :::::::::::: .:: :::::::::::::::::::.. : :::::::: gi|212 LDTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSV 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 mKIAA1 QPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS :::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|212 QPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1130 >>gi|209573159|sp|A7MB46.1|PCD18_BOVIN RecName: Full=Pro (1134 aa) initn: 6985 init1: 6985 opt: 6985 Z-score: 7773.6 bits: 1450.2 E(): 0 Smith-Waterman score: 6985; 92.681% identity (98.060% similar) in 1134 aa overlap (2-1135:1-1134) 10 20 30 40 50 60 mKIAA1 PMHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP :.:::.:::: :..:::.. :. :::.::::::::::::::::::::::::::::.::: gi|209 MYQMNAKMHFTFVFALLVVSFNLDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLVKLP 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ :::.:::::: :::.:::::::..:::::::::::::::::::::::::::.:::::::: gi|209 NPSTVRFRAMQRGNTPLLVVNEDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN ::::::.::::::::::::: .:::::::::::::::::::::::::::::::::::::: gi|209 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS :.::::::::::::::::::::.:::::::.::::::::::::::::::::::::::::: gi|209 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI ::::::::: :: :::::::::::::::::::::::::::.::::::::::::::::::: gi|209 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKI 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM :::.::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|209 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT ::::::.::.:::::::::::.::::::::::::::.::::::::::::::::::::::: gi|209 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS :::::::::::::::::::::::::::.:.::::::::::::::.::::::::.:::::: gi|209 NATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISENNS 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA1 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::.:::::::::.:::::::: ::::::::::::::::::::: gi|209 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYDTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA1 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH ::::::::::::: ::: :::::::::::::::::::::::..::::::::::::::::: gi|209 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEISIPKGAESGFH 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA1 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSTEWALSVIIQ :::::..:::::.:::.:::::.:::::::..:::::::::::::::.: ::: :::.:: gi|209 VTRIRAIDRDSGVNAELSCSIVAGNEENIFVIDPRSCDIHTNVSMESVPYTEWELSVVIQ 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA1 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL :::.: :::::::.:..:.::::::::::::::.: :::::::::::::::::::::::: gi|209 DKGNPQLHTKVLLKCVIFEYAESVTSTAMTSVSQAPLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA1 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|209 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 840 mKIAA1 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQ 780 790 800 810 820 830 850 860 870 880 890 900 mKIAA1 GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG 840 850 860 870 880 890 910 920 930 940 950 960 mKIAA1 FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ 900 910 920 930 940 950 970 980 990 1000 1010 1020 mKIAA1 QHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPASL :: ::.:.:: ::...::::::::::::::::.:::::.::::::::::::::::::::: gi|209 QHPHQSLEDDVQPVDSGEKKKSFSTFGKDSPSEEDSGDTSTSSLLSEMSSVFQRLLPASL 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 mKIAA1 DTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTNSSGTPLGTHSSVQ ::.:::.: :::::::::::: .:: ::::::::::::::::::::.:: ::::::::: gi|209 DTYSECTEMDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTNNSGPPLGTHSSVQ 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 mKIAA1 PSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS ::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|209 PSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1130 >>gi|194208449|ref|XP_001915698.1| PREDICTED: protocadhe (1128 aa) initn: 5000 init1: 5000 opt: 6952 Z-score: 7736.9 bits: 1443.4 E(): 0 Smith-Waterman score: 6952; 92.908% identity (98.227% similar) in 1128 aa overlap (9-1135:1-1128) 10 20 30 40 50 60 mKIAA1 PMHQMNTKMHFRFALALLMAFFSHDVLAKNLKYRIYEEQRVGSVIARLSEDVADVLLKLP :::::..:.::. :. .::.::::::::::::::::::::::::::::.::: gi|194 MHFRFVFAILMVSFNAEVLSKNLKYRIYEEQRVGSVIARLSEDVADVLVKLP 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 NPSAVRFRAMPRGNSPLLVVNENTGEISIGAKIDREQLCQKNLNCSIEFDVLTLPTEHLQ :::.:::::: :::::::::::..:::::::::::::::::::::::::::.:::::::: gi|194 NPSTVRFRAMQRGNSPLLVVNEDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQ 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LFHIEVDVLDINDNSPQFSRPVIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN ::::::.::::::::::::: .:::::::::::::::::::::::::::::::::::::: gi|194 LFHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAN 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 DYFNIEVRTRTDGAKYAELIVVKELDRELKASYELQLTASDMGVPQRSGSSILKISISDS :.::::::::::::::::::::.:::::::.::::::::::::::::::::::::::::: gi|194 DFFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDS 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 NDNSPAFEQPSYTIQLLENSPVGTLLLDLNATDPDEGANGRIVYSFSSHVSPKIIETFKI ::::::::: :: :::::::::::::::::::::::::::.::::::::::::::::::: gi|194 NDNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKI 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 DSEKGHLTLFKPVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLM :::.::::::: :::::::::::::::::::::::::::::::::::::::::::.:::: gi|194 DSERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLM 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 SPGKEEVSYVFEGDPIDTFVAIVRVQDKDSGLNGEIICKLHGHGHFKLQKTYENNYLILT ::::::.::.:::::::::::.::::::::::::::.::::::::::::::::::::::: gi|194 SPGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILT 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 NATLDREKRSEYSLTVIAEDKGTPSLSSVRHFTVQINDINDNPPRFQRSRYEFVISENNS :::::::::::::::::::::::::::.:.::::::::::::::.::::::::.:::::: gi|194 NATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISENNS 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA1 PGAYITTVTATDPDLGENGHVTYTILESFVLGSSITTYVTIDPSNGAIYALRIFDHEEVS :::::::::::::::::::.:::::::::.:::::::::::::::::::::::::::::: gi|194 PGAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVS 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA1 QITFVVEARDGGSQKQLSSNTTVVLTIIDENDNVPVVIGPAMHNNTAEISIPKGAESGFH ::::::::::::: ::: ::::::::::::::::::::::...::::::::::::.:::: gi|194 QITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPTLRNNTAEISIPKGADSGFH 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA1 VTRIRVVDRDSGANAEFSCSIVSGNEENIFIMDPRSCDIHTNVSMESIPSTEWALSVIIQ :::::..:::::::::.:::::.:::::::..:::::::::::::::.: ::: :::::: gi|194 VTRIRAIDRDSGANAELSCSIVAGNEENIFVIDPRSCDIHTNVSMESVPYTEWELSVIIQ 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA1 DKGSPPLHTKVLLRCMVFDYAESVTSTAMTSVSRASLDVSMIIIISLGAICAVLLVIMVL :::.: :::::::.::...::::::::::::::.:::::::::::::::::::::::::: gi|194 DKGNPQLHTKVLLKCMILEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVL 660 670 680 690 700 710 730 740 750 760 770 780 mKIAA1 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSP 720 730 740 750 760 770 790 800 810 820 830 mKIAA1 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVE-VSQLLSMLH :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|194 SSSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLH 780 790 800 810 820 830 840 850 860 870 880 890 mKIAA1 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QGQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGE 840 850 860 870 880 890 900 910 920 930 940 950 mKIAA1 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GFSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQ 900 910 920 930 940 950 960 970 980 990 1000 1010 mKIAA1 QQHSHQGLDDDSQPAENGEKKKSFSTFGKDSPSDEDSGDSSTSSLLSEMSSVFQRLLPAS ::: ::.:.::.:::..:::::::::::::::.::::::.:::::::::::::::::: : gi|194 QQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDSGDNSTSSLLSEMSSVFQRLLPPS 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 mKIAA1 LDTFSECNEGDRSNSLERRKGPAQGKTGGYPQGVAAWAASTHFQNPTNSSGTPLGTHSSV :::.:::.: :::::::::::: .:: :::::::::::::::::::..:: :::::::: gi|194 LDTYSECSEMDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNSGPPLGTHSSV 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 mKIAA1 QPSSKWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQS :::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|194 QPSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS 1080 1090 1100 1110 1120 1135 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 21:34:48 2009 done: Sat Mar 14 21:44:11 2009 Total Scan time: 1218.900 Total Display time: 0.750 Function used was FASTA [version 34.26.5 April 26, 2007]