# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj21306.fasta.nr -Q ../query/mFLJ00248.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00248, 491 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7904535 sequences Expectation_n fit: rho(ln(x))= 5.7645+/-0.000193; mu= 9.6357+/- 0.011 mean_var=94.8191+/-18.043, 0's: 39 Z-trim: 115 B-trim: 0 in 0/65 Lambda= 0.131712 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|47847490|dbj|BAD21417.1| mFLJ00248 protein [Mus ( 491) 3289 635.1 1.3e-179 gi|26353314|dbj|BAC40287.1| unnamed protein produc ( 649) 3232 624.3 2.9e-176 gi|49036090|sp|Q921G6.1|LRCH4_MOUSE RecName: Full= ( 680) 3232 624.4 3e-176 gi|149062925|gb|EDM13248.1| rCG21252 [Rattus norve ( 682) 3045 588.8 1.5e-165 gi|187469041|gb|AAI66781.1| Lrch4 protein [Rattus ( 686) 3019 583.9 4.6e-164 gi|148687302|gb|EDL19249.1| leucine-rich repeats a ( 527) 2867 554.9 1.9e-155 gi|109069274|ref|XP_001086272.1| PREDICTED: simila ( 652) 2850 551.8 2e-154 gi|109069276|ref|XP_001086884.1| PREDICTED: simila ( 683) 2850 551.8 2.1e-154 gi|194218843|ref|XP_001915770.1| PREDICTED: leucin ( 687) 2842 550.2 6.1e-154 gi|148687303|gb|EDL19250.1| leucine-rich repeats a ( 517) 2840 549.8 6.4e-154 gi|119596926|gb|EAW76520.1| leucine-rich repeats a ( 652) 2819 545.9 1.2e-152 gi|49035987|sp|O75427.2|LRCH4_HUMAN RecName: Full= ( 683) 2819 545.9 1.3e-152 gi|119596925|gb|EAW76519.1| leucine-rich repeats a ( 832) 2819 545.9 1.5e-152 gi|3135309|gb|AAC78793.1| leucin rich neuronal pro ( 832) 2793 541.0 4.5e-151 gi|126920885|gb|AAI33496.1| LRCH4 protein [Bos tau ( 658) 2788 540.0 7.2e-151 gi|14043281|gb|AAH07634.1| LRCH4 protein [Homo sap ( 580) 2182 424.8 3e-116 gi|73957978|ref|XP_546954.2| PREDICTED: similar to ( 669) 2144 417.6 5.1e-114 gi|193786688|dbj|BAG52011.1| unnamed protein produ ( 378) 1764 345.2 1.8e-92 gi|20380036|gb|AAH27789.1| Lrch4 protein [Mus musc ( 453) 1716 336.1 1.1e-89 gi|194379508|dbj|BAG63720.1| unnamed protein produ ( 363) 1524 299.6 9.3e-79 gi|189531837|ref|XP_001342926.2| PREDICTED: novel ( 679) 1342 265.2 3.8e-68 gi|126632741|emb|CAM56750.1| novel protein similar ( 681) 1342 265.2 3.8e-68 gi|189521709|ref|XP_685852.3| PREDICTED: similar t ( 679) 1340 264.8 5e-68 gi|112419367|gb|AAI21991.1| Lrch4 protein [Xenopus ( 717) 1312 259.5 2.1e-66 gi|149060670|gb|EDM11384.1| leucine-rich repeats a ( 526) 1270 251.4 4.2e-64 gi|149060669|gb|EDM11383.1| leucine-rich repeats a ( 719) 1270 251.6 5.3e-64 gi|149060668|gb|EDM11382.1| leucine-rich repeats a ( 769) 1270 251.6 5.5e-64 gi|194664095|ref|XP_001254205.2| PREDICTED: simila ( 737) 1268 251.2 7e-64 gi|148665406|gb|EDK97822.1| mCG130130, isoform CRA ( 530) 1266 250.7 7.1e-64 gi|219521428|gb|AAI72144.1| Unknown (protein for M ( 692) 1266 250.8 8.7e-64 gi|148665407|gb|EDK97823.1| mCG130130, isoform CRA ( 728) 1266 250.8 9e-64 gi|187957426|gb|AAI57925.1| Lrch3 protein [Mus mus ( 742) 1266 250.8 9.1e-64 gi|148665405|gb|EDK97821.1| mCG130130, isoform CRA ( 778) 1266 250.8 9.5e-64 gi|116248532|sp|Q8BVU0.2|LRCH3_MOUSE RecName: Full ( 778) 1266 250.8 9.5e-64 gi|47216492|emb|CAG02143.1| unnamed protein produc ( 786) 1260 249.7 2.1e-63 gi|149731259|ref|XP_001501537.1| PREDICTED: simila ( 774) 1258 249.3 2.7e-63 gi|118095156|ref|XP_422732.2| PREDICTED: similar t ( 784) 1257 249.1 3.1e-63 gi|26345458|dbj|BAC36380.1| unnamed protein produc ( 382) 1239 245.4 1.9e-62 gi|114591388|ref|XP_001166942.1| PREDICTED: leucin ( 597) 1239 245.6 2.7e-62 gi|13960126|gb|AAH07504.1| Leucine-rich repeats an ( 712) 1240 245.8 2.7e-62 gi|224060621|ref|XP_002190674.1| PREDICTED: simila ( 718) 1240 245.9 2.7e-62 gi|119612649|gb|EAW92243.1| leucine-rich repeats a ( 767) 1240 245.9 2.9e-62 gi|116248531|sp|Q96II8.2|LRCH3_HUMAN RecName: Full ( 777) 1240 245.9 2.9e-62 gi|119612650|gb|EAW92244.1| leucine-rich repeats a ( 803) 1240 245.9 3e-62 gi|114591386|ref|XP_516983.2| PREDICTED: leucine-r ( 712) 1239 245.7 3.1e-62 gi|114591374|ref|XP_001167057.1| PREDICTED: leucin ( 743) 1239 245.7 3.2e-62 gi|114591384|ref|XP_001167002.1| PREDICTED: leucin ( 747) 1239 245.7 3.2e-62 gi|114591376|ref|XP_001166845.1| PREDICTED: leucin ( 750) 1239 245.7 3.2e-62 gi|114591378|ref|XP_001166969.1| PREDICTED: leucin ( 757) 1239 245.7 3.3e-62 gi|114591382|ref|XP_001167119.1| PREDICTED: leucin ( 767) 1239 245.7 3.3e-62 >>gi|47847490|dbj|BAD21417.1| mFLJ00248 protein [Mus mus (491 aa) initn: 3289 init1: 3289 opt: 3289 Z-score: 3381.1 bits: 635.1 E(): 1.3e-179 Smith-Waterman score: 3289; 100.000% identity (100.000% similar) in 491 aa overlap (1-491:1-491) 10 20 30 40 50 60 mFLJ00 RRERMAAAVAGPLAAGGEEAAASVSLPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 RRERMAAAVAGPLAAGGEEAAASVSLPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH 10 20 30 40 50 60 70 80 90 100 110 120 mFLJ00 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLKCLNPALGNLTAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLKCLNPALGNLTAL 70 80 90 100 110 120 130 140 150 160 170 180 mFLJ00 TYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNELQSLPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 TYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNELQSLPV 130 140 150 160 170 180 190 200 210 220 230 240 mFLJ00 ELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRISRIPVSFCRLRHLQVVLLDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 ELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRISRIPVSFCRLRHLQVVLLDS 190 200 210 220 230 240 250 260 270 280 290 300 mFLJ00 NPLQSPPAQICLKGKLHIFKYLTMEAGRRGAALGDLVPSRPPSFSPCPAEDLFPGRRYDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 NPLQSPPAQICLKGKLHIFKYLTMEAGRRGAALGDLVPSRPPSFSPCPAEDLFPGRRYDG 250 260 270 280 290 300 310 320 330 340 350 360 mFLJ00 GLDSGFHSVDSGSKRWSGNEVRTSFAELSFRISELARDPRGPRQPREDGAGDGDLEQIDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 GLDSGFHSVDSGSKRWSGNEVRTSFAELSFRISELARDPRGPRQPREDGAGDGDLEQIDF 310 320 330 340 350 360 370 380 390 400 410 420 mFLJ00 IDSHVPGEDEDRSAAEEQLPSELSLVAGDVEKPSSSRREEPAGEERRRPDTLQLWQERER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 IDSHVPGEDEDRSAAEEQLPSELSLVAGDVEKPSSSRREEPAGEERRRPDTLQLWQERER 370 380 390 400 410 420 430 440 450 460 470 480 mFLJ00 KQQQQSGGWGSPRKDSVLKRGIRAAGAGASAPSTQATCNGPPKSSTTQLGVSGGQGAPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 KQQQQSGGWGSPRKDSVLKRGIRAAGAGASAPSTQATCNGPPKSSTTQLGVSGGQGAPTP 430 440 450 460 470 480 490 mFLJ00 PPTSQDPLPVS ::::::::::: gi|478 PPTSQDPLPVS 490 >>gi|26353314|dbj|BAC40287.1| unnamed protein product [M (649 aa) initn: 3232 init1: 3232 opt: 3232 Z-score: 3320.9 bits: 624.3 E(): 2.9e-176 Smith-Waterman score: 3232; 98.973% identity (99.384% similar) in 487 aa overlap (5-491:1-487) 10 20 30 40 50 60 mFLJ00 RRERMAAAVAGPLAAGGEEAAASVSLPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MAAAVAGPLAAGGEEAAASVSLPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLKCLNPALGNLTAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLKCLNPALGNLTAL 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 TYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNELQSLPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 TYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNELQSLPV 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 ELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRISRIPVSFCRLRHLQVVLLDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRISRIPVSFCRLRHLQVVLLDS 180 190 200 210 220 230 250 260 270 280 290 300 mFLJ00 NPLQSPPAQICLKGKLHIFKYLTMEAGRRGAALGDLVPSRPPSFSPCPAEDLFPGRRYDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NPLQSPPAQICLKGKLHIFKYLTMEAGRRGAALGDLVPSRPPSFSPCPAEDLFPGRRYDG 240 250 260 270 280 290 310 320 330 340 350 360 mFLJ00 GLDSGFHSVDSGSKRWSGNEVRTSFAELSFRISELARDPRGPRQPREDGAGDGDLEQIDF :::::::::::::::::::: .:.:::::::::::::::::::::::::::::::::: gi|263 GLDSGFHSVDSGSKRWSGNESTDDFSELSFRISELARDPRGPRQPREDGAGDGDLEQIDF 300 310 320 330 340 350 370 380 390 400 410 420 mFLJ00 IDSHVPGEDEDRSAAEEQLPSELSLVAGDVEKPSSSRREEPAGEERRRPDTLQLWQERER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 IDSHVPGEDEDRSAAEEQLPSELSLVAGDVEKPSSSRREEPAGEERRRPDTLQLWQERER 360 370 380 390 400 410 430 440 450 460 470 480 mFLJ00 KQQQQSGGWGSPRKDSVLKRGIRAAGAGASAPSTQATCNGPPKSSTTQLGVSGGQGAPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KQQQQSGGWGSPRKDSVLKRGIRAAGAGASAPSTQATCNGPPKSSTTQLGVSGGQGAPTP 420 430 440 450 460 470 490 mFLJ00 PPTSQDPLPVS ::::::::::: gi|263 PPTSQDPLPVSGPVTAPVPRPLGSIQRPNSFLFRSSSQSGSSPSSPESVLRPRPFPQEKE 480 490 500 510 520 530 >>gi|49036090|sp|Q921G6.1|LRCH4_MOUSE RecName: Full=Leuc (680 aa) initn: 3232 init1: 3232 opt: 3232 Z-score: 3320.6 bits: 624.4 E(): 3e-176 Smith-Waterman score: 3232; 98.973% identity (99.384% similar) in 487 aa overlap (5-491:1-487) 10 20 30 40 50 60 mFLJ00 RRERMAAAVAGPLAAGGEEAAASVSLPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 MAAAVAGPLAAGGEEAAASVSLPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLKCLNPALGNLTAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLKCLNPALGNLTAL 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 TYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNELQSLPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 TYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNELQSLPV 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 ELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRISRIPVSFCRLRHLQVVLLDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 ELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRISRIPVSFCRLRHLQVVLLDS 180 190 200 210 220 230 250 260 270 280 290 300 mFLJ00 NPLQSPPAQICLKGKLHIFKYLTMEAGRRGAALGDLVPSRPPSFSPCPAEDLFPGRRYDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 NPLQSPPAQICLKGKLHIFKYLTMEAGRRGAALGDLVPSRPPSFSPCPAEDLFPGRRYDG 240 250 260 270 280 290 310 320 330 340 350 360 mFLJ00 GLDSGFHSVDSGSKRWSGNEVRTSFAELSFRISELARDPRGPRQPREDGAGDGDLEQIDF :::::::::::::::::::: .:.:::::::::::::::::::::::::::::::::: gi|490 GLDSGFHSVDSGSKRWSGNESTDDFSELSFRISELARDPRGPRQPREDGAGDGDLEQIDF 300 310 320 330 340 350 370 380 390 400 410 420 mFLJ00 IDSHVPGEDEDRSAAEEQLPSELSLVAGDVEKPSSSRREEPAGEERRRPDTLQLWQERER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 IDSHVPGEDEDRSAAEEQLPSELSLVAGDVEKPSSSRREEPAGEERRRPDTLQLWQERER 360 370 380 390 400 410 430 440 450 460 470 480 mFLJ00 KQQQQSGGWGSPRKDSVLKRGIRAAGAGASAPSTQATCNGPPKSSTTQLGVSGGQGAPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|490 KQQQQSGGWGSPRKDSVLKRGIRAAGAGASAPSTQATCNGPPKSSTTQLGVSGGQGAPTP 420 430 440 450 460 470 490 mFLJ00 PPTSQDPLPVS ::::::::::: gi|490 PPTSQDPLPVSGPVTAPVPRPLGSIQRPNSFLFRSSSQSGSSPSSPESVLRPRPFPQEKE 480 490 500 510 520 530 >>gi|149062925|gb|EDM13248.1| rCG21252 [Rattus norvegicu (682 aa) initn: 2421 init1: 2421 opt: 3045 Z-score: 3128.6 bits: 588.8 E(): 1.5e-165 Smith-Waterman score: 3045; 92.813% identity (97.536% similar) in 487 aa overlap (5-491:1-486) 10 20 30 40 50 60 mFLJ00 RRERMAAAVAGPLAAGGEEAAASVSLPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH :::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|149 MAAAVAGPLAAGGEEAAASVSVPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLKCLNPALGNLTAL :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|149 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLRCLNPALGNLTAL 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 TYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNELQSLPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNELQSLPV 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 ELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRISRIPVSFCRLRHLQVVLLDS :::::::::::::::::::::::::::::::::::::::.:::::::::::::::.:::: gi|149 ELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRVSRIPVSFCRLRHLQVILLDS 180 190 200 210 220 230 250 260 270 280 290 300 mFLJ00 NPLQSPPAQICLKGKLHIFKYLTMEAGRRGAALGDLVPSRPPSFSPCPAEDLFPGRRYDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NPLQSPPAQICLKGKLHIFKYLTMEAGRRGAALGDLVPSRPPSFSPCPAEDLFPGRRYDG 240 250 260 270 280 290 310 320 330 340 350 360 mFLJ00 GLDSGFHSVDSGSKRWSGNEVRTSFAELSFRISELARDPRGPRQPREDGAGDGDLEQIDF :::::::::::::::::::: .:.:::::::::::.:::::::::::.:::::::::: gi|149 GLDSGFHSVDSGSKRWSGNESTDDFSELSFRISELAREPRGPRQPREDGSGDGDLEQIDF 300 310 320 330 340 350 370 380 390 400 410 420 mFLJ00 IDSHVPGEDEDRSAAEEQLPSELSLVAGDVEKPSSSRREEPAGEERRRPDTLQLWQERER :::::::.:: .::::: :::::::.:::.:.::::::::::::::::::::.::::::: gi|149 IDSHVPGDDE-QSAAEEPLPSELSLAAGDMERPSSSRREEPAGEERRRPDTLHLWQERER 360 370 380 390 400 410 430 440 450 460 470 480 mFLJ00 KQQQQSGGWGSPRKDSVLKRGIRAAGAGASAPSTQATCNGPPKSSTTQLGVSGGQGAPTP . :::::.:: .:::. ::::::.::::::::::..::::::::..:::::: ::::: gi|149 RLQQQSGAWGPSKKDSIPKRGIRATGAGASAPSTQTACNGPPKSSAAQLGVSGEQGAPTL 420 430 440 450 460 470 490 mFLJ00 PPTSQDPLPVS : ::::::::: gi|149 PSTSQDPLPVSGPVTAPVPRPLGSIQRPNSFLFRSSSQSGSSPSSPESVLRPRPFPQILE 480 490 500 510 520 530 >>gi|187469041|gb|AAI66781.1| Lrch4 protein [Rattus norv (686 aa) initn: 2610 init1: 2388 opt: 3019 Z-score: 3101.8 bits: 583.9 E(): 4.6e-164 Smith-Waterman score: 3019; 91.853% identity (96.741% similar) in 491 aa overlap (5-491:1-490) 10 20 30 40 50 60 mFLJ00 RRERMAAAVAGPLAAGGEEAAASVSLPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH ::::::::::::.::::::::.:::::::::::::::::::::::::::::::::: gi|187 MAAAVAGPLAAGSEEAAASVSVPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLKCLNPALGNLTAL :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|187 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLRCLNPALGNLTAL 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 TYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNELQSLPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 TYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNELQSLPV 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 ELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRISRIPVSFCRLRHLQVVLLDS :::::::::::::::::::::::::::::::::::::::.:::::::::::::::.:::: gi|187 ELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRVSRIPVSFCRLRHLQVILLDS 180 190 200 210 220 230 250 260 270 280 290 300 mFLJ00 NPLQSPPAQICLKGKLHIFKYLTMEAGRRGAALGDLVPSRPPSFSPCPAEDLFPGRRYDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 NPLQSPPAQICLKGKLHIFKYLTMEAGRRGAALGDLVPSRPPSFSPCPAEDLFPGRRYDG 240 250 260 270 280 290 310 320 330 340 350 360 mFLJ00 GLDSGFHSVDSGSKRWSGNEVRTSFAELSFRISELARDPRGPRQPREDGAGDGDLEQIDF :::::::::::::::::::: .:.:::::::::::.:::::::::::.:::::::::: gi|187 GLDSGFHSVDSGSKRWSGNESTDDFSELSFRISELAREPRGPRQPREDGSGDGDLEQIDF 300 310 320 330 340 350 370 380 390 400 410 mFLJ00 IDSHVPGEDEDRSAAE----EQLPSELSLVAGDVEKPSSSRREEPAGEERRRPDTLQLWQ :::::::.:: .:::: : :::::::.:::.:.::::::::::::::::::::.::: gi|187 IDSHVPGDDE-QSAAEVRTQEPLPSELSLAAGDMERPSSSRREEPAGEERRRPDTLHLWQ 360 370 380 390 400 410 420 430 440 450 460 470 mFLJ00 ERERKQQQQSGGWGSPRKDSVLKRGIRAAGAGASAPSTQATCNGPPKSSTTQLGVSGGQG ::::. :::::.:: .:::. ::::::.::::::::::..::::::::..:::::: :: gi|187 ERERRLQQQSGAWGPSKKDSIPKRGIRATGAGASAPSTQTACNGPPKSSAAQLGVSGEQG 420 430 440 450 460 470 480 490 mFLJ00 APTPPPTSQDPLPVS ::: : ::::::::: gi|187 APTLPSTSQDPLPVSGPVTAPVPRPLGSIQRPNSFLFRSSSQSGSSPSSPESVLRPRPFP 480 490 500 510 520 530 >>gi|148687302|gb|EDL19249.1| leucine-rich repeats and c (527 aa) initn: 3105 init1: 2857 opt: 2867 Z-score: 2947.3 bits: 554.9 E(): 1.9e-155 Smith-Waterman score: 2877; 88.755% identity (91.968% similar) in 498 aa overlap (1-491:7-495) 10 20 30 40 50 mFLJ00 RRERMAAAVAGPLAAGGEEAAASVSLPGSPGLPGSRSAERALEEAVATGTLNLS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QSGRGSRRERMAAAVAGPLAAGGEEAAASVSLPGSPGLPGSRSAERALEEAVATGTLNLS 10 20 30 40 50 60 60 70 80 90 100 110 mFLJ00 NRRLKHFPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLKCLNPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NRRLKHFPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLKCLNPAL 70 80 90 100 110 120 120 130 140 150 160 170 mFLJ00 GNLTALTYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GNLTALTYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNE 130 140 150 160 170 180 180 190 200 210 220 230 mFLJ00 LQSLPVELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRISRIPVSFCRLRHLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LQSLPVELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRISRIPVSFCRLRHLQ 190 200 210 220 230 240 240 250 260 270 280 290 mFLJ00 VVLLDSNPLQSPPAQICLKGKLHIFKYLTMEAGRRGAALGDLVPSRPPSFSPCPAEDLFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VVLLDSNPLQSPPAQICLKGKLHIFKYLTMEAGRRGAALGDLVPSRPPSFSPCPAEDLFP 250 260 270 280 290 300 300 310 320 330 340 350 mFLJ00 GRRYDGGLDSGFHSVDSGSKRWSGNEVRTSFAELSFRISELARDPRGPRQPREDGAGDGD :::::::::::::::::::::::::: .:.:::::::::::::::::::::::::::: gi|148 GRRYDGGLDSGFHSVDSGSKRWSGNESTDDFSELSFRISELARDPRGPRQPREDGAGDGD 310 320 330 340 350 360 360 370 380 390 400 410 mFLJ00 LEQIDFIDSHVPGEDEDRSAAEEQLPSELSLVAGDVEKPSSSRREEPAGEERRRPDTLQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LEQIDFIDSHVPGEDEDRSAAEEQLPSELSLVAGDVEKPSSSRREEPAGEERRRPDTLQL 370 380 390 400 410 420 420 430 440 450 460 470 mFLJ00 WQERERKQQQQSGGWGSPRKDSVLKRGIRAAGAGASAPSTQATCNGPPKSSTTQLGV--- :::::::::::::::: :.. : : :. :: .. : :: ... : . gi|148 WQERERKQQQQSGGWGVPQE------GQRPE---AGDPSCRGRCFGPIHTGHLQWPTKVQ 430 440 450 460 470 480 490 mFLJ00 ---SGG-QGAPTPPPTSQDPLPVS .:. .:: . : . : : : gi|148 HYPTGSFRGAGSSHTTPHLPGPPSCIWTSDSSCSQAPGLHSETKQLPLPVLFSEWL 480 490 500 510 520 >>gi|109069274|ref|XP_001086272.1| PREDICTED: similar to (652 aa) initn: 3124 init1: 2850 opt: 2850 Z-score: 2928.6 bits: 551.8 E(): 2e-154 Smith-Waterman score: 2850; 86.037% identity (94.867% similar) in 487 aa overlap (5-491:1-487) 10 20 30 40 50 60 mFLJ00 RRERMAAAVAGPLAAGGEEAAASVSLPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH ::::::.:::: ::::::..:.:::::::::::::::::::::::::::::::::: gi|109 MAAAVAAPLAARGEEAAATTSVPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLKCLNPALGNLTAL :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|109 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLRCLNPALGNLTAL 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 TYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNELQSLPV ::::::::::: ::::::::::::::.::::::::::::.:::::::::::::::::::: gi|109 TYLNLSRNQLSLLPPYICQLPLRVLIVSNNKLGALPPDIGTLGSLRQLDVSSNELQSLPV 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 ELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRISRIPVSFCRLRHLQVVLLDS :::.: ::::::::::::::::.::::::::::::::::.:::::::::::::::.:::: gi|109 ELCGLSSLRDLNVRRNQLSTLPEELGDLPLVRLDFSCNRVSRIPVSFCRLRHLQVILLDS 180 190 200 210 220 230 250 260 270 280 290 300 mFLJ00 NPLQSPPAQICLKGKLHIFKYLTMEAGRRGAALGDLVPSRPPSFSPCPAEDLFPGRRYDG :::::::::.::::::::::::. :::.::.:::::.::::::::::::::::::.:::: gi|109 NPLQSPPAQVCLKGKLHIFKYLSTEAGQRGSALGDLAPSRPPSFSPCPAEDLFPGHRYDG 240 250 260 270 280 290 310 320 330 340 350 360 mFLJ00 GLDSGFHSVDSGSKRWSGNEVRTSFAELSFRISELARDPRGPRQPREDGAGDGDLEQIDF :::::::::::::::::::: :.:::::::::::.:::::. ::::..::: ::::: gi|109 GLDSGFHSVDSGSKRWSGNESTDEFSELSFRISELAREPRGPRERREDGSADGDPEQIDF 300 310 320 330 340 350 370 380 390 400 410 420 mFLJ00 IDSHVPGEDEDRSAAEEQLPSELSLVAGDVEKPSSSRREEPAGEERRRPDTLQLWQERER ::::::::::.:...::: : ::: ::: :. :::::::::::::::::::::::::: gi|109 IDSHVPGEDEERGTVEEQRPPELSPGAGDRERAPSSRREEPAGEERRRPDTLQLWQERER 360 370 380 390 400 410 430 440 450 460 470 480 mFLJ00 KQQQQSGGWGSPRKDSVLKRGIRAAGAGASAPSTQATCNGPPKSSTTQLGVSGGQGAPTP .::::::.:: :::::.:: :.:.: .::.: ::::: :::::::..: :.. :::::.: gi|109 RQQQQSGAWGPPRKDSLLKSGLRSAVGGATAMSTQATHNGPPKSSASQAGATVGQGAPAP 420 430 440 450 460 470 490 mFLJ00 PPTSQDPLPVS :.::.:::.. gi|109 APASQEPLPIAGPATAPAPRPLGSIQRPNSFLFRSSSQSGSGPSSPDSVLRPRRSPQIPD 480 490 500 510 520 530 >>gi|109069276|ref|XP_001086884.1| PREDICTED: similar to (683 aa) initn: 3124 init1: 2850 opt: 2850 Z-score: 2928.3 bits: 551.8 E(): 2.1e-154 Smith-Waterman score: 2850; 86.037% identity (94.867% similar) in 487 aa overlap (5-491:1-487) 10 20 30 40 50 60 mFLJ00 RRERMAAAVAGPLAAGGEEAAASVSLPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH ::::::.:::: ::::::..:.:::::::::::::::::::::::::::::::::: gi|109 MAAAVAAPLAARGEEAAATTSVPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLKCLNPALGNLTAL :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|109 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLRCLNPALGNLTAL 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 TYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNELQSLPV ::::::::::: ::::::::::::::.::::::::::::.:::::::::::::::::::: gi|109 TYLNLSRNQLSLLPPYICQLPLRVLIVSNNKLGALPPDIGTLGSLRQLDVSSNELQSLPV 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 ELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRISRIPVSFCRLRHLQVVLLDS :::.: ::::::::::::::::.::::::::::::::::.:::::::::::::::.:::: gi|109 ELCGLSSLRDLNVRRNQLSTLPEELGDLPLVRLDFSCNRVSRIPVSFCRLRHLQVILLDS 180 190 200 210 220 230 250 260 270 280 290 300 mFLJ00 NPLQSPPAQICLKGKLHIFKYLTMEAGRRGAALGDLVPSRPPSFSPCPAEDLFPGRRYDG :::::::::.::::::::::::. :::.::.:::::.::::::::::::::::::.:::: gi|109 NPLQSPPAQVCLKGKLHIFKYLSTEAGQRGSALGDLAPSRPPSFSPCPAEDLFPGHRYDG 240 250 260 270 280 290 310 320 330 340 350 360 mFLJ00 GLDSGFHSVDSGSKRWSGNEVRTSFAELSFRISELARDPRGPRQPREDGAGDGDLEQIDF :::::::::::::::::::: :.:::::::::::.:::::. ::::..::: ::::: gi|109 GLDSGFHSVDSGSKRWSGNESTDEFSELSFRISELAREPRGPRERREDGSADGDPEQIDF 300 310 320 330 340 350 370 380 390 400 410 420 mFLJ00 IDSHVPGEDEDRSAAEEQLPSELSLVAGDVEKPSSSRREEPAGEERRRPDTLQLWQERER ::::::::::.:...::: : ::: ::: :. :::::::::::::::::::::::::: gi|109 IDSHVPGEDEERGTVEEQRPPELSPGAGDRERAPSSRREEPAGEERRRPDTLQLWQERER 360 370 380 390 400 410 430 440 450 460 470 480 mFLJ00 KQQQQSGGWGSPRKDSVLKRGIRAAGAGASAPSTQATCNGPPKSSTTQLGVSGGQGAPTP .::::::.:: :::::.:: :.:.: .::.: ::::: :::::::..: :.. :::::.: gi|109 RQQQQSGAWGPPRKDSLLKSGLRSAVGGATAMSTQATHNGPPKSSASQAGATVGQGAPAP 420 430 440 450 460 470 490 mFLJ00 PPTSQDPLPVS :.::.:::.. gi|109 APASQEPLPIAGPATAPAPRPLGSIQRPNSFLFRSSSQSGSGPSSPDSVLRPRRSPQIPD 480 490 500 510 520 530 >>gi|194218843|ref|XP_001915770.1| PREDICTED: leucine-ri (687 aa) initn: 2076 init1: 1678 opt: 2842 Z-score: 2920.0 bits: 550.2 E(): 6.1e-154 Smith-Waterman score: 2842; 86.613% identity (93.712% similar) in 493 aa overlap (5-491:1-491) 10 20 30 40 50 60 mFLJ00 RRERMAAAVAGPLAAGGEEAAASVSLPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH ::::::.:::::::::::..:.::.::::::::::::::::::::::::::::::: gi|194 MAAAVAAPLAAGGEEAAATTSVPGAPGLPGSRSAERALEEAVATGTLNLSNRRLKH 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLKCLNPALGNLTAL :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|194 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLRCLNPALGNLTAL 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 TYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNELQSLPV ::::::::::::::::::::::::::.:::::::::::::.::::::::::::::::::. gi|194 TYLNLSRNQLSSLPPYICQLPLRVLIVSNNKLGALPPDISALGSLRQLDVSSNELQSLPA 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 ELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRISRIPVSFCRLRHLQVVLLDS ::::: :::::::::::::::::::::::::::::::::.:::::::::::::::.:::: gi|194 ELCSLPSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRVSRIPVSFCRLRHLQVILLDS 180 190 200 210 220 230 250 260 270 280 290 mFLJ00 NPLQSPPAQICLKGKLHIFKYLTMEAGRRG-AALGDLVPSRPPSFSPCPAEDLFPGRRYD ::::::::::::::::::::::. :::::: .:::::.:::::::::::::::::::::: gi|194 NPLQSPPAQICLKGKLHIFKYLSTEAGRRGGSALGDLAPSRPPSFSPCPAEDLFPGRRYD 240 250 260 270 280 290 300 310 320 330 340 350 mFLJ00 GGLDSGFHSVDSGSKRWSGNEVRTSFAELSFRISELARDPRGPRQPREDGAGDGDLEQID ::::::::::::::::::::: :.:::::::::::.:::::. ::::..::: :::: gi|194 GGLDSGFHSVDSGSKRWSGNESTDEFSELSFRISELAREPRGPRERREDGSADGDPEQID 300 310 320 330 340 350 360 370 380 390 400 410 mFLJ00 FIDSHVPGEDEDRSAAEEQLPSELSLVAGDVEKPSSSRREEPAGEERRRPDTLQLWQERE :::::::::::.:.:: :: : ::: :::: :. ::::::::::::::::::::::::: gi|194 FIDSHVPGEDEERGAAAEQRPPELSPVAGDGERALSSRREEPAGEERRRPDTLQLWQERE 360 370 380 390 400 410 420 430 440 450 460 470 mFLJ00 RKQQQQ-----SGGWGSPRKDSVLKRGIRAAGAGASAPSTQATCNGPPKSSTTQLGVSGG :.:::: :: ::.:.::: :: :.::::.::.: :.::: :: ::::. ::.::: gi|194 RRQQQQQQQQQSGVWGAPKKDSFLKLGLRAAGGGAAASSSQATYNGTPKSSAPLLGASGG 420 430 440 450 460 470 480 490 mFLJ00 QGAPTPPPTSQDPLPVS ::::. ::::.:.::. gi|194 QGAPA--PTSQEPVPVARPATPPAPRPLGSIQRPNSFLFRSSSQSGSGPSSPDSVLRPRR 480 490 500 510 520 530 >>gi|148687303|gb|EDL19250.1| leucine-rich repeats and c (517 aa) initn: 3078 init1: 2830 opt: 2840 Z-score: 2919.7 bits: 549.8 E(): 6.4e-154 Smith-Waterman score: 2850; 88.664% identity (91.903% similar) in 494 aa overlap (5-491:1-485) 10 20 30 40 50 60 mFLJ00 RRERMAAAVAGPLAAGGEEAAASVSLPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MAAAVAGPLAAGGEEAAASVSLPGSPGLPGSRSAERALEEAVATGTLNLSNRRLKH 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLKCLNPALGNLTAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FPRGAARSYDLSDITQADLSRNRFPEVPEAACQLVSLEGLSLYHNCLKCLNPALGNLTAL 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 TYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNELQSLPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TYLNLSRNQLSSLPPYICQLPLRVLIISNNKLGALPPDISTLGSLRQLDVSSNELQSLPV 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 ELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRISRIPVSFCRLRHLQVVLLDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ELCSLRSLRDLNVRRNQLSTLPDELGDLPLVRLDFSCNRISRIPVSFCRLRHLQVVLLDS 180 190 200 210 220 230 250 260 270 280 290 300 mFLJ00 NPLQSPPAQICLKGKLHIFKYLTMEAGRRGAALGDLVPSRPPSFSPCPAEDLFPGRRYDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NPLQSPPAQICLKGKLHIFKYLTMEAGRRGAALGDLVPSRPPSFSPCPAEDLFPGRRYDG 240 250 260 270 280 290 310 320 330 340 350 360 mFLJ00 GLDSGFHSVDSGSKRWSGNEVRTSFAELSFRISELARDPRGPRQPREDGAGDGDLEQIDF :::::::::::::::::::: .:.:::::::::::::::::::::::::::::::::: gi|148 GLDSGFHSVDSGSKRWSGNESTDDFSELSFRISELARDPRGPRQPREDGAGDGDLEQIDF 300 310 320 330 340 350 370 380 390 400 410 420 mFLJ00 IDSHVPGEDEDRSAAEEQLPSELSLVAGDVEKPSSSRREEPAGEERRRPDTLQLWQERER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IDSHVPGEDEDRSAAEEQLPSELSLVAGDVEKPSSSRREEPAGEERRRPDTLQLWQERER 360 370 380 390 400 410 430 440 450 460 470 mFLJ00 KQQQQSGGWGSPRKDSVLKRGIRAAGAGASAPSTQATCNGPPKSSTTQLGV------SGG :::::::::: :.. : : :. :: .. : :: ... : . .:. gi|148 KQQQQSGGWGVPQE------GQRPE---AGDPSCRGRCFGPIHTGHLQWPTKVQHYPTGS 420 430 440 450 460 480 490 mFLJ00 -QGAPTPPPTSQDPLPVS .:: . : . : : : gi|148 FRGAGSSHTTPHLPGPPSCIWTSDSSCSQAPGLHSETKQLPLPVLFSEWL 470 480 490 500 510 491 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 02:10:28 2009 done: Fri Mar 13 02:17:33 2009 Total Scan time: 950.890 Total Display time: 0.160 Function used was FASTA [version 34.26.5 April 26, 2007]