# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj21130.fasta.nr -Q ../query/mKIAA0712.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0712, 506 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919033 sequences Expectation_n fit: rho(ln(x))= 5.7267+/-0.000188; mu= 9.3103+/- 0.011 mean_var=84.5204+/-16.218, 0's: 33 Z-trim: 38 B-trim: 0 in 0/66 Lambda= 0.139506 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148693406|gb|EDL25353.1| mCG14024 [Mus musculus (1046) 3540 722.4 1.4e-205 gi|28569544|gb|AAO43676.1| rac GTPase activating p (1740) 3540 722.6 2.1e-205 gi|206558298|sp|Q811P8.2|RICS_MOUSE RecName: Full= (2089) 3540 722.6 2.4e-205 gi|149027840|gb|EDL83300.1| rCG22711 [Rattus norve (1129) 3375 689.3 1.5e-195 gi|197246751|gb|AAI68683.1| Unknown (protein for I (1591) 3375 689.3 1.9e-195 gi|109483229|ref|XP_236020.4| PREDICTED: similar t (2049) 3375 689.4 2.4e-195 gi|109484470|ref|XP_001056872.1| PREDICTED: simila (2332) 3375 689.5 2.6e-195 gi|73954831|ref|XP_546401.2| PREDICTED: similar to (1966) 3174 649.0 3.5e-183 gi|28569546|gb|AAO43677.1| rac GTPase activating p (1738) 3152 644.5 6.8e-182 gi|119588142|gb|EAW67738.1| Rho GTPase-activating (2061) 3152 644.5 7.8e-182 gi|205829172|sp|A7KAX9.1|RICS_HUMAN RecName: Full= (2087) 3152 644.5 7.8e-182 gi|194679892|ref|XP_582687.4| PREDICTED: similar t (2083) 2805 574.7 8.3e-161 gi|109109344|ref|XP_001111190.1| PREDICTED: simila (2073) 2736 560.8 1.2e-156 gi|74183648|dbj|BAE24454.1| unnamed protein produc ( 177) 1230 257.0 3.1e-66 gi|82201095|sp|Q6GPD0.1|RICS_XENLA RecName: Full=R (1940) 973 206.0 7.7e-50 gi|189533981|ref|XP_697910.3| PREDICTED: im:715006 (1908) 393 89.2 1.1e-14 gi|47216830|emb|CAG02721.1| unnamed protein produc ( 527) 376 85.4 4e-14 gi|49651004|emb|CAG77941.1| YALI0F07777p [Yarrowia ( 595) 197 49.4 0.0031 gi|209155862|gb|ACI34163.1| C3orf32 [Salmo salar] ( 388) 187 47.3 0.0089 >>gi|148693406|gb|EDL25353.1| mCG14024 [Mus musculus] (1046 aa) initn: 3540 init1: 3540 opt: 3540 Z-score: 3847.1 bits: 722.4 E(): 1.4e-205 Smith-Waterman score: 3540; 100.000% identity (100.000% similar) in 506 aa overlap (1-506:541-1046) 10 20 30 mKIAA0 RRVQSLHAPPPSMIRSVPISRTEVPPDDEP :::::::::::::::::::::::::::::: gi|148 PCSRVEYVSSLGSSVRNPCCPEDILPYPTIRRVQSLHAPPPSMIRSVPISRTEVPPDDEP 520 530 540 550 560 570 40 50 60 70 80 90 mKIAA0 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPEGALCDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPEGALCDV 580 590 600 610 620 630 100 110 120 130 140 150 mKIAA0 DAYGTVQLRPLHRLSSRDFAFYNPRLQGKNVYNYAGLPPRPRANATGYFSGNDHNVVTMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DAYGTVQLRPLHRLSSRDFAFYNPRLQGKNVYNYAGLPPRPRANATGYFSGNDHNVVTMP 640 650 660 670 680 690 160 170 180 190 200 210 mKIAA0 PTADGKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMTPAVQEDLGGIYVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PTADGKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMTPAVQEDLGGIYVI 700 710 720 730 740 750 220 230 240 250 260 270 mKIAA0 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSTQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSTQA 760 770 780 790 800 810 280 290 300 310 320 330 mKIAA0 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG 820 830 840 850 860 870 340 350 360 370 380 390 mKIAA0 MPDTSEPSNYHNSGKYMTSGQGSLTLNHKEVRLPKDLDRPRARQPPGPEKHSRDCYKEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MPDTSEPSNYHNSGKYMTSGQGSLTLNHKEVRLPKDLDRPRARQPPGPEKHSRDCYKEEE 880 890 900 910 920 930 400 410 420 430 440 450 mKIAA0 HFSQSMVPPPKPERSHSLKLHHTQNLERDPSVLYQYQTHSKRQSSMTVVSQYDNLEDYHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HFSQSMVPPPKPERSHSLKLHHTQNLERDPSVLYQYQTHSKRQSSMTVVSQYDNLEDYHS 940 950 960 970 980 990 460 470 480 490 500 mKIAA0 LPQHQRGGFGGAGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LPQHQRGGFGGAGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE 1000 1010 1020 1030 1040 >>gi|28569544|gb|AAO43676.1| rac GTPase activating prote (1740 aa) initn: 3540 init1: 3540 opt: 3540 Z-score: 3843.9 bits: 722.6 E(): 2.1e-205 Smith-Waterman score: 3540; 100.000% identity (100.000% similar) in 506 aa overlap (1-506:1235-1740) 10 20 30 mKIAA0 RRVQSLHAPPPSMIRSVPISRTEVPPDDEP :::::::::::::::::::::::::::::: gi|285 PCSRVEYVSSLGSSVRNPCCPEDILPYPTIRRVQSLHAPPPSMIRSVPISRTEVPPDDEP 1210 1220 1230 1240 1250 1260 40 50 60 70 80 90 mKIAA0 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPEGALCDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPEGALCDV 1270 1280 1290 1300 1310 1320 100 110 120 130 140 150 mKIAA0 DAYGTVQLRPLHRLSSRDFAFYNPRLQGKNVYNYAGLPPRPRANATGYFSGNDHNVVTMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 DAYGTVQLRPLHRLSSRDFAFYNPRLQGKNVYNYAGLPPRPRANATGYFSGNDHNVVTMP 1330 1340 1350 1360 1370 1380 160 170 180 190 200 210 mKIAA0 PTADGKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMTPAVQEDLGGIYVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 PTADGKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMTPAVQEDLGGIYVI 1390 1400 1410 1420 1430 1440 220 230 240 250 260 270 mKIAA0 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSTQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSTQA 1450 1460 1470 1480 1490 1500 280 290 300 310 320 330 mKIAA0 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG 1510 1520 1530 1540 1550 1560 340 350 360 370 380 390 mKIAA0 MPDTSEPSNYHNSGKYMTSGQGSLTLNHKEVRLPKDLDRPRARQPPGPEKHSRDCYKEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 MPDTSEPSNYHNSGKYMTSGQGSLTLNHKEVRLPKDLDRPRARQPPGPEKHSRDCYKEEE 1570 1580 1590 1600 1610 1620 400 410 420 430 440 450 mKIAA0 HFSQSMVPPPKPERSHSLKLHHTQNLERDPSVLYQYQTHSKRQSSMTVVSQYDNLEDYHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 HFSQSMVPPPKPERSHSLKLHHTQNLERDPSVLYQYQTHSKRQSSMTVVSQYDNLEDYHS 1630 1640 1650 1660 1670 1680 460 470 480 490 500 mKIAA0 LPQHQRGGFGGAGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 LPQHQRGGFGGAGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE 1690 1700 1710 1720 1730 1740 >>gi|206558298|sp|Q811P8.2|RICS_MOUSE RecName: Full=Rho/ (2089 aa) initn: 3540 init1: 3540 opt: 3540 Z-score: 3842.8 bits: 722.6 E(): 2.4e-205 Smith-Waterman score: 3540; 100.000% identity (100.000% similar) in 506 aa overlap (1-506:1584-2089) 10 20 30 mKIAA0 RRVQSLHAPPPSMIRSVPISRTEVPPDDEP :::::::::::::::::::::::::::::: gi|206 PCSRVEYVSSLGSSVRNPCCPEDILPYPTIRRVQSLHAPPPSMIRSVPISRTEVPPDDEP 1560 1570 1580 1590 1600 1610 40 50 60 70 80 90 mKIAA0 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPEGALCDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|206 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPEGALCDV 1620 1630 1640 1650 1660 1670 100 110 120 130 140 150 mKIAA0 DAYGTVQLRPLHRLSSRDFAFYNPRLQGKNVYNYAGLPPRPRANATGYFSGNDHNVVTMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|206 DAYGTVQLRPLHRLSSRDFAFYNPRLQGKNVYNYAGLPPRPRANATGYFSGNDHNVVTMP 1680 1690 1700 1710 1720 1730 160 170 180 190 200 210 mKIAA0 PTADGKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMTPAVQEDLGGIYVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|206 PTADGKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMTPAVQEDLGGIYVI 1740 1750 1760 1770 1780 1790 220 230 240 250 260 270 mKIAA0 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSTQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|206 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSTQA 1800 1810 1820 1830 1840 1850 280 290 300 310 320 330 mKIAA0 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|206 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG 1860 1870 1880 1890 1900 1910 340 350 360 370 380 390 mKIAA0 MPDTSEPSNYHNSGKYMTSGQGSLTLNHKEVRLPKDLDRPRARQPPGPEKHSRDCYKEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|206 MPDTSEPSNYHNSGKYMTSGQGSLTLNHKEVRLPKDLDRPRARQPPGPEKHSRDCYKEEE 1920 1930 1940 1950 1960 1970 400 410 420 430 440 450 mKIAA0 HFSQSMVPPPKPERSHSLKLHHTQNLERDPSVLYQYQTHSKRQSSMTVVSQYDNLEDYHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|206 HFSQSMVPPPKPERSHSLKLHHTQNLERDPSVLYQYQTHSKRQSSMTVVSQYDNLEDYHS 1980 1990 2000 2010 2020 2030 460 470 480 490 500 mKIAA0 LPQHQRGGFGGAGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|206 LPQHQRGGFGGAGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE 2040 2050 2060 2070 2080 >>gi|149027840|gb|EDL83300.1| rCG22711 [Rattus norvegicu (1129 aa) initn: 3375 init1: 3375 opt: 3375 Z-score: 3667.2 bits: 689.3 E(): 1.5e-195 Smith-Waterman score: 3375; 94.664% identity (98.814% similar) in 506 aa overlap (1-506:624-1129) 10 20 30 mKIAA0 RRVQSLHAPPPSMIRSVPISRTEVPPDDEP :::::::::::::::::::::::::::::: gi|149 PCSRVEYVSSLGSSVRNPCCPEDILPYPTIRRVQSLHAPPPSMIRSVPISRTEVPPDDEP 600 610 620 630 640 650 40 50 60 70 80 90 mKIAA0 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPEGALCDV :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|149 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPDGALCDV 660 670 680 690 700 710 100 110 120 130 140 150 mKIAA0 DAYGTVQLRPLHRLSSRDFAFYNPRLQGKNVYNYAGLPPRPRANATGYFSGNDHNVVTMP :::::::::::::::.::::::::::::::.::::.:::::::.::::::.::::::.:: gi|149 DAYGTVQLRPLHRLSNRDFAFYNPRLQGKNAYNYAALPPRPRASATGYFSSNDHNVVNMP 720 730 740 750 760 770 160 170 180 190 200 210 mKIAA0 PTADGKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMTPAVQEDLGGIYVI :::: :::::::::::::::::::::::::::::::::::::::::.::::.:::::::: gi|149 PTADVKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMAPAVQDDLGGIYVI 780 790 800 810 820 830 220 230 240 250 260 270 mKIAA0 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSTQA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :. gi|149 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSQQV 840 850 860 870 880 890 280 290 300 310 320 330 mKIAA0 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG 900 910 920 930 940 950 340 350 360 370 380 390 mKIAA0 MPDTSEPSNYHNSGKYMTSGQGSLTLNHKEVRLPKDLDRPRARQPPGPEKHSRDCYKEEE :::.:::..:::::::.:::: :: :::::::: ::.:::::::::.::::::::::::: gi|149 MPDASEPNSYHNSGKYVTSGQESLRLNHKEVRLSKDVDRPRARQPPAPEKHSRDCYKEEE 960 970 980 990 1000 1010 400 410 420 430 440 450 mKIAA0 HFSQSMVPPPKPERSHSLKLHHTQNLERDPSVLYQYQTHSKRQSSMTVVSQYDNLEDYHS ::.::.:::::::::::::::::::::::::.:: ::::::::::.:::::::::::::: gi|149 HFTQSVVPPPKPERSHSLKLHHTQNLERDPSMLYPYQTHSKRQSSVTVVSQYDNLEDYHS 1020 1030 1040 1050 1060 1070 460 470 480 490 500 mKIAA0 LPQHQRGGFGGAGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE :::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|149 LPQHQRGGFGGGGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE 1080 1090 1100 1110 1120 >>gi|197246751|gb|AAI68683.1| Unknown (protein for IMAGE (1591 aa) initn: 3375 init1: 3375 opt: 3375 Z-score: 3665.0 bits: 689.3 E(): 1.9e-195 Smith-Waterman score: 3375; 94.664% identity (98.814% similar) in 506 aa overlap (1-506:1086-1591) 10 20 30 mKIAA0 RRVQSLHAPPPSMIRSVPISRTEVPPDDEP :::::::::::::::::::::::::::::: gi|197 PCSRVEYVSSLGSSVRNPCCPEDILPYPTIRRVQSLHAPPPSMIRSVPISRTEVPPDDEP 1060 1070 1080 1090 1100 1110 40 50 60 70 80 90 mKIAA0 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPEGALCDV :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|197 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPDGALCDV 1120 1130 1140 1150 1160 1170 100 110 120 130 140 150 mKIAA0 DAYGTVQLRPLHRLSSRDFAFYNPRLQGKNVYNYAGLPPRPRANATGYFSGNDHNVVTMP :::::::::::::::.::::::::::::::.::::.:::::::.::::::.::::::.:: gi|197 DAYGTVQLRPLHRLSNRDFAFYNPRLQGKNAYNYAALPPRPRASATGYFSSNDHNVVNMP 1180 1190 1200 1210 1220 1230 160 170 180 190 200 210 mKIAA0 PTADGKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMTPAVQEDLGGIYVI :::: :::::::::::::::::::::::::::::::::::::::::.::::.:::::::: gi|197 PTADVKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMAPAVQDDLGGIYVI 1240 1250 1260 1270 1280 1290 220 230 240 250 260 270 mKIAA0 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSTQA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :. gi|197 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSQQV 1300 1310 1320 1330 1340 1350 280 290 300 310 320 330 mKIAA0 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|197 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG 1360 1370 1380 1390 1400 1410 340 350 360 370 380 390 mKIAA0 MPDTSEPSNYHNSGKYMTSGQGSLTLNHKEVRLPKDLDRPRARQPPGPEKHSRDCYKEEE :::.:::..:::::::.:::: :: :::::::: ::.:::::::::.::::::::::::: gi|197 MPDASEPNSYHNSGKYVTSGQESLRLNHKEVRLSKDVDRPRARQPPAPEKHSRDCYKEEE 1420 1430 1440 1450 1460 1470 400 410 420 430 440 450 mKIAA0 HFSQSMVPPPKPERSHSLKLHHTQNLERDPSVLYQYQTHSKRQSSMTVVSQYDNLEDYHS ::.::.:::::::::::::::::::::::::.:: ::::::::::.:::::::::::::: gi|197 HFTQSVVPPPKPERSHSLKLHHTQNLERDPSMLYPYQTHSKRQSSVTVVSQYDNLEDYHS 1480 1490 1500 1510 1520 1530 460 470 480 490 500 mKIAA0 LPQHQRGGFGGAGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE :::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|197 LPQHQRGGFGGGGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE 1540 1550 1560 1570 1580 1590 >>gi|109483229|ref|XP_236020.4| PREDICTED: similar to Rh (2049 aa) initn: 3375 init1: 3375 opt: 3375 Z-score: 3663.4 bits: 689.4 E(): 2.4e-195 Smith-Waterman score: 3375; 94.664% identity (98.814% similar) in 506 aa overlap (1-506:1544-2049) 10 20 30 mKIAA0 RRVQSLHAPPPSMIRSVPISRTEVPPDDEP :::::::::::::::::::::::::::::: gi|109 PCSRVEYVSSLGSSVRNPCCPEDILPYPTIRRVQSLHAPPPSMIRSVPISRTEVPPDDEP 1520 1530 1540 1550 1560 1570 40 50 60 70 80 90 mKIAA0 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPEGALCDV :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|109 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPDGALCDV 1580 1590 1600 1610 1620 1630 100 110 120 130 140 150 mKIAA0 DAYGTVQLRPLHRLSSRDFAFYNPRLQGKNVYNYAGLPPRPRANATGYFSGNDHNVVTMP :::::::::::::::.::::::::::::::.::::.:::::::.::::::.::::::.:: gi|109 DAYGTVQLRPLHRLSNRDFAFYNPRLQGKNAYNYAALPPRPRASATGYFSSNDHNVVNMP 1640 1650 1660 1670 1680 1690 160 170 180 190 200 210 mKIAA0 PTADGKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMTPAVQEDLGGIYVI :::: :::::::::::::::::::::::::::::::::::::::::.::::.:::::::: gi|109 PTADVKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMAPAVQDDLGGIYVI 1700 1710 1720 1730 1740 1750 220 230 240 250 260 270 mKIAA0 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSTQA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :. gi|109 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSQQV 1760 1770 1780 1790 1800 1810 280 290 300 310 320 330 mKIAA0 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG 1820 1830 1840 1850 1860 1870 340 350 360 370 380 390 mKIAA0 MPDTSEPSNYHNSGKYMTSGQGSLTLNHKEVRLPKDLDRPRARQPPGPEKHSRDCYKEEE :::.:::..:::::::.:::: :: :::::::: ::.:::::::::.::::::::::::: gi|109 MPDASEPNSYHNSGKYVTSGQESLRLNHKEVRLSKDVDRPRARQPPAPEKHSRDCYKEEE 1880 1890 1900 1910 1920 1930 400 410 420 430 440 450 mKIAA0 HFSQSMVPPPKPERSHSLKLHHTQNLERDPSVLYQYQTHSKRQSSMTVVSQYDNLEDYHS ::.::.:::::::::::::::::::::::::.:: ::::::::::.:::::::::::::: gi|109 HFTQSVVPPPKPERSHSLKLHHTQNLERDPSMLYPYQTHSKRQSSVTVVSQYDNLEDYHS 1940 1950 1960 1970 1980 1990 460 470 480 490 500 mKIAA0 LPQHQRGGFGGAGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE :::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|109 LPQHQRGGFGGGGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE 2000 2010 2020 2030 2040 >>gi|109484470|ref|XP_001056872.1| PREDICTED: similar to (2332 aa) initn: 3375 init1: 3375 opt: 3375 Z-score: 3662.6 bits: 689.5 E(): 2.6e-195 Smith-Waterman score: 3375; 94.664% identity (98.814% similar) in 506 aa overlap (1-506:1827-2332) 10 20 30 mKIAA0 RRVQSLHAPPPSMIRSVPISRTEVPPDDEP :::::::::::::::::::::::::::::: gi|109 PCSRVEYVSSLGSSVRNPCCPEDILPYPTIRRVQSLHAPPPSMIRSVPISRTEVPPDDEP 1800 1810 1820 1830 1840 1850 40 50 60 70 80 90 mKIAA0 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPEGALCDV :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|109 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPDGALCDV 1860 1870 1880 1890 1900 1910 100 110 120 130 140 150 mKIAA0 DAYGTVQLRPLHRLSSRDFAFYNPRLQGKNVYNYAGLPPRPRANATGYFSGNDHNVVTMP :::::::::::::::.::::::::::::::.::::.:::::::.::::::.::::::.:: gi|109 DAYGTVQLRPLHRLSNRDFAFYNPRLQGKNAYNYAALPPRPRASATGYFSSNDHNVVNMP 1920 1930 1940 1950 1960 1970 160 170 180 190 200 210 mKIAA0 PTADGKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMTPAVQEDLGGIYVI :::: :::::::::::::::::::::::::::::::::::::::::.::::.:::::::: gi|109 PTADVKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMAPAVQDDLGGIYVI 1980 1990 2000 2010 2020 2030 220 230 240 250 260 270 mKIAA0 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSTQA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :. gi|109 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSQQV 2040 2050 2060 2070 2080 2090 280 290 300 310 320 330 mKIAA0 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG 2100 2110 2120 2130 2140 2150 340 350 360 370 380 390 mKIAA0 MPDTSEPSNYHNSGKYMTSGQGSLTLNHKEVRLPKDLDRPRARQPPGPEKHSRDCYKEEE :::.:::..:::::::.:::: :: :::::::: ::.:::::::::.::::::::::::: gi|109 MPDASEPNSYHNSGKYVTSGQESLRLNHKEVRLSKDVDRPRARQPPAPEKHSRDCYKEEE 2160 2170 2180 2190 2200 2210 400 410 420 430 440 450 mKIAA0 HFSQSMVPPPKPERSHSLKLHHTQNLERDPSVLYQYQTHSKRQSSMTVVSQYDNLEDYHS ::.::.:::::::::::::::::::::::::.:: ::::::::::.:::::::::::::: gi|109 HFTQSVVPPPKPERSHSLKLHHTQNLERDPSMLYPYQTHSKRQSSVTVVSQYDNLEDYHS 2220 2230 2240 2250 2260 2270 460 470 480 490 500 mKIAA0 LPQHQRGGFGGAGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE :::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|109 LPQHQRGGFGGGGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE 2280 2290 2300 2310 2320 2330 >>gi|73954831|ref|XP_546401.2| PREDICTED: similar to Rho (1966 aa) initn: 2224 init1: 2224 opt: 3174 Z-score: 3445.1 bits: 649.0 E(): 3.5e-183 Smith-Waterman score: 3174; 88.363% identity (96.055% similar) in 507 aa overlap (1-506:1460-1966) 10 20 30 mKIAA0 RRVQSLHAPPPSMIRSVPISRTEVPPDDEP :::::::::: ::::::::::::::::::: gi|739 PCSRVEYVSSLGSTLRSSCYPEDIPSYPTIRRVQSLHAPPSSMIRSVPISRTEVPPDDEP 1430 1440 1450 1460 1470 1480 40 50 60 70 80 90 mKIAA0 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPEGALCDV ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 AYCPRPLYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPEGALCDV 1490 1500 1510 1520 1530 1540 100 110 120 130 140 150 mKIAA0 DAYGTVQLRPLHRLSSRDFAFYNPRLQGKNVYNYAGLPPRPRANATGYFSGNDHNVVTMP :::::::::::::: .::::::::::::::.:.:::: :::::: ::::::::::::.:: gi|739 DAYGTVQLRPLHRLPNRDFAFYNPRLQGKNLYGYAGLLPRPRANMTGYFSGNDHNVVNMP 1550 1560 1570 1580 1590 1600 160 170 180 190 200 210 mKIAA0 PTADGKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMTPAVQEDLGGIYVI :::: ::.::::::::::::::::::::::::::::::.:::::::.::::.:::::::: gi|739 PTADVKHAYTSWDLEDMEKYRMQSIRRESRARQKVKGPVMSQYDNMSPAVQDDLGGIYVI 1610 1620 1630 1640 1650 1660 220 230 240 250 260 270 mKIAA0 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSTQA ::::::::::::::::::::.::: .:::::::..:::::::: ::::::::::::. :. gi|739 HLRSKSDPGKTGLLSVAEGKDGRHATKAVSPEGEDRFYRKHPEPEFDRAHHHGGYGNGQS 1670 1680 1690 1700 1710 1720 280 290 300 310 320 330 mKIAA0 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG :::.:::::::::::: ::::::::::::::.::::::::::::::::::.:::::: :: gi|739 EKPTLPQKQSSLRNRKPHDMGCSLPEHRAHQDASHRQLCESKNGPPYPQGTGQLDYGPKG 1730 1740 1750 1760 1770 1780 340 350 360 370 380 mKIAA0 MPDTSEPSNYHNSG-KYMTSGQGSLTLNHKEVRLPKDLDRPRARQPPGPEKHSRDCYKEE .::.::: .::::: ::. ::: :: :::::::: :.:.::::::::.:::::::::::. gi|739 IPDASEPVSYHNSGGKYIPSGQESLRLNHKEVRLSKELERPRARQPPAPEKHSRDCYKED 1790 1800 1810 1820 1830 1840 390 400 410 420 430 440 mKIAA0 EHFSQSMVPPPKPERSHSLKLHHTQNLERDPSVLYQYQTHSKRQSSMTVVSQYDNLEDYH ::..::.:::::::::::::::::::.::::..:::::::.:::::::::::::::: :: gi|739 EHLTQSVVPPPKPERSHSLKLHHTQNVERDPGALYQYQTHGKRQSSMTVVSQYDNLEGYH 1850 1860 1870 1880 1890 1900 450 460 470 480 490 500 mKIAA0 SLPQHQRGGFGGAGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE : ::::::::::..::.:.:::: :::.::::::::::::::::::: ::.:::::: gi|739 SPPQHQRGGFGGGAMGTYMPSGFPHPQNRTYATALGQGAFLPTELSLQHPETQIHAE 1910 1920 1930 1940 1950 1960 >>gi|28569546|gb|AAO43677.1| rac GTPase activating prote (1738 aa) initn: 2218 init1: 2218 opt: 3152 Z-score: 3421.9 bits: 644.5 E(): 6.8e-182 Smith-Waterman score: 3152; 88.166% identity (95.858% similar) in 507 aa overlap (1-506:1232-1738) 10 20 30 mKIAA0 RRVQSLHAPPPSMIRSVPISRTEVPPDDEP :::::::::: ::::::::::::::::::: gi|285 PCSRVEYVSSLSSSVRNTCYPEDIPPYPTIRRVQSLHAPPSSMIRSVPISRTEVPPDDEP 1210 1220 1230 1240 1250 1260 40 50 60 70 80 90 mKIAA0 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPEGALCDV ::::::.::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|285 AYCPRPLYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPDGALCDV 1270 1280 1290 1300 1310 1320 100 110 120 130 140 150 mKIAA0 DAYGTVQLRPLHRLSSRDFAFYNPRLQGKNVYNYAGLPPRPRANATGYFSGNDHNVVTMP :::::::::::::: .:::::::::::::..:.:::: ::::::.::::: ::::::.:: gi|285 DAYGTVQLRPLHRLPNRDFAFYNPRLQGKSLYSYAGLAPRPRANVTGYFSPNDHNVVSMP 1330 1340 1350 1360 1370 1380 160 170 180 190 200 210 mKIAA0 PTADGKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMTPAVQEDLGGIYVI :.:: :::::::::::::::::::::::::::::::::.::::::::::::.:::::::: gi|285 PAADVKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPVMSQYDNMTPAVQDDLGGIYVI 1390 1400 1410 1420 1430 1440 220 230 240 250 260 270 mKIAA0 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSTQA :::::::::::::::::::::.:: :::.::::..::::.:::.:.::::::::.:::: gi|285 HLRSKSDPGKTGLLSVAEGKESRHAAKAISPEGEDRFYRRHPEAEMDRAHHHGGHGSTQP 1450 1460 1470 1480 1490 1500 280 290 300 310 320 330 mKIAA0 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG :::::::::::::.::: :::::::::::::::::::.:::::::::::::::::::::: gi|285 EKPSLPQKQSSLRSRKLPDMGCSLPEHRAHQEASHRQFCESKNGPPYPQGAGQLDYGSKG 1510 1520 1530 1540 1550 1560 340 350 360 370 380 mKIAA0 MPDTSEPSNYHNSG-KYMTSGQGSLTLNHKEVRLPKDLDRPRARQPPGPEKHSRDCYKEE .:::::: .::::: :: .::: :: :::::::: :...:: .::: .:::::::::::: gi|285 IPDTSEPVSYHNSGVKYAASGQESLRLNHKEVRLSKEMERPWVRQPSAPEKHSRDCYKEE 1570 1580 1590 1600 1610 1620 390 400 410 420 430 440 mKIAA0 EHFSQSMVPPPKPERSHSLKLHHTQNLERDPSVLYQYQTHSKRQSSMTVVSQYDNLEDYH ::..::.:::::::::::::::::::.::::::::::: :.:::::.::::::::::::: gi|285 EHLTQSIVPPPKPERSHSLKLHHTQNVERDPSVLYQYQPHGKRQSSVTVVSQYDNLEDYH 1630 1640 1650 1660 1670 1680 450 460 470 480 490 500 mKIAA0 SLPQHQRGGFGGAGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE :::::::: :::.:::.::: :: ::::::::::::::::::.:::: ::.:::::: gi|285 SLPQHQRGVFGGGGMGTYVPPGFPHPQSRTYATALGQGAFLPAELSLQHPETQIHAE 1690 1700 1710 1720 1730 >>gi|119588142|gb|EAW67738.1| Rho GTPase-activating prot (2061 aa) initn: 2218 init1: 2218 opt: 3152 Z-score: 3420.9 bits: 644.5 E(): 7.8e-182 Smith-Waterman score: 3152; 88.166% identity (95.858% similar) in 507 aa overlap (1-506:1555-2061) 10 20 30 mKIAA0 RRVQSLHAPPPSMIRSVPISRTEVPPDDEP :::::::::: ::::::::::::::::::: gi|119 PCSRVEYVSSLSSSVRNTCYPEDIPPYPTIRRVQSLHAPPSSMIRSVPISRTEVPPDDEP 1530 1540 1550 1560 1570 1580 40 50 60 70 80 90 mKIAA0 AYCPRPVYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPEGALCDV ::::::.::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|119 AYCPRPLYQYKPYQSSQARSDYHVTQLQPYFENGRVHYRYSPYSSSSSSYYSPDGALCDV 1590 1600 1610 1620 1630 1640 100 110 120 130 140 150 mKIAA0 DAYGTVQLRPLHRLSSRDFAFYNPRLQGKNVYNYAGLPPRPRANATGYFSGNDHNVVTMP :::::::::::::: .:::::::::::::..:.:::: ::::::.::::: ::::::.:: gi|119 DAYGTVQLRPLHRLPNRDFAFYNPRLQGKSLYSYAGLAPRPRANVTGYFSPNDHNVVSMP 1650 1660 1670 1680 1690 1700 160 170 180 190 200 210 mKIAA0 PTADGKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPIMSQYDNMTPAVQEDLGGIYVI :.:: :::::::::::::::::::::::::::::::::.::::::::::::.:::::::: gi|119 PAADVKHTYTSWDLEDMEKYRMQSIRRESRARQKVKGPVMSQYDNMTPAVQDDLGGIYVI 1710 1720 1730 1740 1750 1760 220 230 240 250 260 270 mKIAA0 HLRSKSDPGKTGLLSVAEGKEGRHPAKAVSPEGDERFYRKHPESEFDRAHHHGGYGSTQA :::::::::::::::::::::.:: :::.::::..::::.:::.:.::::::::.:::: gi|119 HLRSKSDPGKTGLLSVAEGKESRHAAKAISPEGEDRFYRRHPEAEMDRAHHHGGHGSTQP 1770 1780 1790 1800 1810 1820 280 290 300 310 320 330 mKIAA0 EKPSLPQKQSSLRNRKLHDMGCSLPEHRAHQEASHRQLCESKNGPPYPQGAGQLDYGSKG :::::::::::::.::: :::::::::::::::::::.:::::::::::::::::::::: gi|119 EKPSLPQKQSSLRSRKLPDMGCSLPEHRAHQEASHRQFCESKNGPPYPQGAGQLDYGSKG 1830 1840 1850 1860 1870 1880 340 350 360 370 380 mKIAA0 MPDTSEPSNYHNSG-KYMTSGQGSLTLNHKEVRLPKDLDRPRARQPPGPEKHSRDCYKEE .:::::: .::::: :: .::: :: :::::::: :...:: .::: .:::::::::::: gi|119 IPDTSEPVSYHNSGVKYAASGQESLRLNHKEVRLSKEMERPWVRQPSAPEKHSRDCYKEE 1890 1900 1910 1920 1930 1940 390 400 410 420 430 440 mKIAA0 EHFSQSMVPPPKPERSHSLKLHHTQNLERDPSVLYQYQTHSKRQSSMTVVSQYDNLEDYH ::..::.:::::::::::::::::::.::::::::::: :.:::::.::::::::::::: gi|119 EHLTQSIVPPPKPERSHSLKLHHTQNVERDPSVLYQYQPHGKRQSSVTVVSQYDNLEDYH 1950 1960 1970 1980 1990 2000 450 460 470 480 490 500 mKIAA0 SLPQHQRGGFGGAGMGAYVPSGFVHPQSRTYATALGQGAFLPTELSLPHPDTQIHAE :::::::: :::.:::.::: :: ::::::::::::::::::.:::: ::.:::::: gi|119 SLPQHQRGVFGGGGMGTYVPPGFPHPQSRTYATALGQGAFLPAELSLQHPETQIHAE 2010 2020 2030 2040 2050 2060 506 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 01:23:17 2009 done: Mon Mar 16 01:30:12 2009 Total Scan time: 930.470 Total Display time: 0.270 Function used was FASTA [version 34.26.5 April 26, 2007]