# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj17221.fasta.nr -Q ../query/mKIAA4241.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mKIAA4241, 453 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7918195 sequences
Expectation_n fit: rho(ln(x))= 5.3220+/-0.000186; mu= 11.4097+/- 0.010
mean_var=82.6945+/-16.050, 0's: 41 Z-trim: 57 B-trim: 0 in 0/68
Lambda= 0.141038
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 37, opt: 25, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|109065915|ref|XP_001109483.1| PREDICTED: simila ( 514) 2698 558.6 1.3e-156
gi|13124032|sp|P97696.1|CYH3_RAT RecName: Full=Cyt ( 400) 2688 556.4 4.5e-156
gi|13124039|sp|O08967.1|CYH3_MOUSE RecName: Full=C ( 399) 2668 552.4 7.6e-155
gi|26331224|dbj|BAC29342.1| unnamed protein produc ( 399) 2667 552.2 8.7e-155
gi|73958135|ref|XP_851399.1| PREDICTED: similar to ( 576) 2666 552.1 1.3e-154
gi|13124042|sp|O43739.2|CYH3_HUMAN RecName: Full=C ( 400) 2663 551.3 1.5e-154
gi|74214402|dbj|BAE40437.1| unnamed protein produc ( 399) 2658 550.3 3.1e-154
gi|2909437|emb|CAA11686.1| ARNO3 [Homo sapiens] ( 399) 2643 547.3 2.6e-153
gi|189053963|dbj|BAG36470.1| unnamed protein produ ( 399) 2641 546.9 3.4e-153
gi|149755401|ref|XP_001493784.1| PREDICTED: simila ( 480) 2582 534.9 1.6e-149
gi|149636788|ref|XP_001507855.1| PREDICTED: simila ( 453) 2576 533.7 3.6e-149
gi|50755888|ref|XP_414927.1| PREDICTED: similar to ( 397) 2566 531.6 1.3e-148
gi|126334362|ref|XP_001377512.1| PREDICTED: simila ( 401) 2539 526.1 6.1e-147
gi|116487434|gb|AAI25678.1| Hypothetical protein M ( 394) 2538 525.9 6.9e-147
gi|13938146|gb|AAH07189.1| Cyth3 protein [Mus musc ( 377) 2519 522.0 9.7e-146
gi|47218018|emb|CAG11423.1| unnamed protein produc ( 388) 2439 505.8 7.9e-141
gi|189525884|ref|XP_001342037.2| PREDICTED: simila ( 396) 2424 502.7 6.6e-140
gi|224070505|ref|XP_002197249.1| PREDICTED: plecks ( 374) 2414 500.7 2.6e-139
gi|148687092|gb|EDL19039.1| pleckstrin homology, S ( 351) 2361 489.8 4.4e-136
gi|189517332|ref|XP_687114.3| PREDICTED: hypotheti ( 372) 2335 484.6 1.8e-134
gi|53127634|emb|CAG31146.1| hypothetical protein [ ( 398) 2304 478.3 1.5e-132
gi|115313031|gb|AAI24140.1| Pleckstrin homology, S ( 399) 2278 473.0 5.9e-131
gi|114670727|ref|XP_001157634.1| PREDICTED: plecks ( 409) 2278 473.0 6e-131
gi|2498175|sp|Q15438.1|CYH1_HUMAN RecName: Full=Cy ( 398) 2277 472.8 6.7e-131
gi|109118718|ref|XP_001108375.1| PREDICTED: plecks ( 400) 2277 472.8 6.8e-131
gi|73964781|ref|XP_848819.1| PREDICTED: similar to ( 400) 2277 472.8 6.8e-131
gi|161761053|pdb|2R0D|A Chain A, Crystal Structure ( 347) 2273 471.9 1.1e-130
gi|74196593|dbj|BAE34408.1| unnamed protein produc ( 400) 2265 470.4 3.7e-130
gi|46310219|gb|AAS87372.1| cytohesin 1-like protei ( 398) 2258 468.9 9.8e-130
gi|119609937|gb|EAW89531.1| pleckstrin homology, S ( 397) 2257 468.7 1.1e-129
gi|73964783|ref|XP_857200.1| PREDICTED: similar to ( 399) 2257 468.7 1.1e-129
gi|119609938|gb|EAW89532.1| pleckstrin homology, S ( 399) 2257 468.7 1.1e-129
gi|13124031|sp|P97694.1|CYH1_RAT RecName: Full=Cyt ( 398) 2254 468.1 1.7e-129
gi|13124083|sp|Q9QX11.1|CYH1_MOUSE RecName: Full=C ( 398) 2254 468.1 1.7e-129
gi|149723497|ref|XP_001490946.1| PREDICTED: plecks ( 409) 2254 468.1 1.8e-129
gi|74186302|dbj|BAE42931.1| unnamed protein produc ( 398) 2251 467.5 2.6e-129
gi|3660535|dbj|BAA33428.1| cytohesin 1 [Mus muscul ( 397) 2234 464.1 2.9e-128
gi|223649290|gb|ACN11403.1| Cytohesin-1 [Salmo sal ( 416) 2231 463.5 4.6e-128
gi|73947173|ref|XP_852119.1| PREDICTED: similar to ( 400) 2225 462.2 1e-127
gi|12248406|dbj|BAB20093.1| unnamed protein produc ( 400) 2223 461.8 1.4e-127
gi|13124707|sp|Q99418.2|CYH2_HUMAN RecName: Full=C ( 400) 2221 461.4 1.8e-127
gi|189529443|ref|XP_697830.3| PREDICTED: similar t ( 400) 2219 461.0 2.4e-127
gi|24324832|gb|AAH38713.1| Cytohesin 2 [Homo sapie ( 400) 2214 460.0 4.9e-127
gi|51702229|sp|P63035.1|CYH2_RAT RecName: Full=Cyt ( 400) 2212 459.6 6.5e-127
gi|7188363|gb|AAF37738.1| cytohesin 1 [Homo sapien ( 390) 2211 459.4 7.3e-127
gi|73947163|ref|XP_864950.1| PREDICTED: similar to ( 399) 2205 458.2 1.7e-126
gi|161761051|pdb|2R09|A Chain A, Crystal Structure ( 347) 2201 457.3 2.7e-126
gi|75072501|sp|Q76MY7.1|CYH2_CERAE RecName: Full=C ( 399) 2201 457.3 3e-126
gi|57032763|gb|AAH88833.1| Cytohesin 2 [Mus muscul ( 400) 2201 457.3 3.1e-126
gi|109125469|ref|XP_001111690.1| PREDICTED: simila ( 528) 2201 457.4 3.8e-126
>>gi|109065915|ref|XP_001109483.1| PREDICTED: similar to (514 aa)
initn: 1862 init1: 1833 opt: 2698 Z-score: 2967.8 bits: 558.6 E(): 1.3e-156
Smith-Waterman score: 2698; 91.028% identity (93.873% similar) in 457 aa overlap (5-453:62-514)
10 20
mKIAA4 GSARPSVEARP---RPG--P-RTLRSSPVLPATT
:. :: : ::: : : ::: :: .
gi|109 GPGRSPRAGPRGPTPHPLRAEAGHGSRDGTPNSEAPPGGRRPGRDPGRELRSRPV---SR
40 50 60 70 80
30 40 50 60 70 80
mKIAA4 SLSPGDQPSRSRRLRARRLAG--SGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRRKKE
.:.:. .:. . . . ::: ::::::: ::::::.::::::::::::::::::::::
gi|109 ALAPAASPALGPSVAGLRLADCESGLKMDEDGGGEGGGVPEDLSLEEREELLDIRRRKKE
90 100 110 120 130 140
90 100 110 120 130 140
mKIAA4 LIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 LIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDL
150 160 170 180 190 200
150 160 170 180 190 200
mKIAA4 LQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALRQFL
:::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::
gi|109 LQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNLVQALRQFL
210 220 230 240 250 260
210 220 230 240 250 260
mKIAA4 WSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 WSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKP
270 280 290 300 310 320
270 280 290 300 310 320
mKIAA4 TAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLK
::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 TAERFIAMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLK
330 340 350 360 370 380
330 340 350 360 370 380
mKIAA4 LGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFELYNP
::: ::::::::::::::::::::::::::: :: ::::::::::::::::::::::::
gi|109 LGG-RVKTWKRRWFILTDNCLYYFEYTTDKEHRGKKPLENLSIREVEDPRKPNCFELYNP
390 400 410 420 430 440
390 400 410 420 430 440
mKIAA4 SHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLATRK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 SHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLATRK
450 460 470 480 490 500
450
mKIAA4 RRIANKK
:::::::
gi|109 RRIANKK
510
>>gi|13124032|sp|P97696.1|CYH3_RAT RecName: Full=Cytohes (400 aa)
initn: 2688 init1: 2688 opt: 2688 Z-score: 2958.3 bits: 556.4 E(): 4.5e-156
Smith-Waterman score: 2688; 100.000% identity (100.000% similar) in 400 aa overlap (54-453:1-400)
30 40 50 60 70 80
mKIAA4 LPATTSLSPGDQPSRSRRLRARRLAGSGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRR
::::::::::::::::::::::::::::::
gi|131 MDEGGGGEGGSVPEDLSLEEREELLDIRRR
10 20 30
90 100 110 120 130 140
mKIAA4 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE
40 50 60 70 80 90
150 160 170 180 190 200
mKIAA4 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR
100 110 120 130 140 150
210 220 230 240 250 260
mKIAA4 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR
160 170 180 190 200 210
270 280 290 300 310 320
mKIAA4 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW
220 230 240 250 260 270
330 340 350 360 370 380
mKIAA4 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL
280 290 300 310 320 330
390 400 410 420 430 440
mKIAA4 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA
340 350 360 370 380 390
450
mKIAA4 TRKRRIANKK
::::::::::
gi|131 TRKRRIANKK
400
>>gi|13124039|sp|O08967.1|CYH3_MOUSE RecName: Full=Cytoh (399 aa)
initn: 1834 init1: 1834 opt: 2668 Z-score: 2936.3 bits: 552.4 E(): 7.6e-155
Smith-Waterman score: 2668; 99.750% identity (99.750% similar) in 400 aa overlap (54-453:1-399)
30 40 50 60 70 80
mKIAA4 LPATTSLSPGDQPSRSRRLRARRLAGSGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRR
::::::::::::::::::::::::::::::
gi|131 MDEGGGGEGGSVPEDLSLEEREELLDIRRR
10 20 30
90 100 110 120 130 140
mKIAA4 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE
40 50 60 70 80 90
150 160 170 180 190 200
mKIAA4 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR
100 110 120 130 140 150
210 220 230 240 250 260
mKIAA4 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR
160 170 180 190 200 210
270 280 290 300 310 320
mKIAA4 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW
220 230 240 250 260 270
330 340 350 360 370 380
mKIAA4 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL
:::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 LLKLGG-RVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL
280 290 300 310 320
390 400 410 420 430 440
mKIAA4 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA
330 340 350 360 370 380
450
mKIAA4 TRKRRIANKK
::::::::::
gi|131 TRKRRIANKK
390
>>gi|26331224|dbj|BAC29342.1| unnamed protein product [M (399 aa)
initn: 1834 init1: 1834 opt: 2667 Z-score: 2935.2 bits: 552.2 E(): 8.7e-155
Smith-Waterman score: 2667; 99.500% identity (99.750% similar) in 400 aa overlap (54-453:1-399)
30 40 50 60 70 80
mKIAA4 LPATTSLSPGDQPSRSRRLRARRLAGSGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRR
::::::::::::::::::::::::::::::
gi|263 MDEGGGGEGGSVPEDLSLEEREELLDIRRR
10 20 30
90 100 110 120 130 140
mKIAA4 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE
40 50 60 70 80 90
150 160 170 180 190 200
mKIAA4 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR
100 110 120 130 140 150
210 220 230 240 250 260
mKIAA4 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR
160 170 180 190 200 210
270 280 290 300 310 320
mKIAA4 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW
220 230 240 250 260 270
330 340 350 360 370 380
mKIAA4 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL
:::::: :::::::::::::::::::::::::::::::.:::::::::::::::::::::
gi|263 LLKLGG-RVKTWKRRWFILTDNCLYYFEYTTDKEPRGIVPLENLSIREVEDPRKPNCFEL
280 290 300 310 320
390 400 410 420 430 440
mKIAA4 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|263 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA
330 340 350 360 370 380
450
mKIAA4 TRKRRIANKK
::::::::::
gi|263 TRKRRIANKK
390
>>gi|73958135|ref|XP_851399.1| PREDICTED: similar to Cyt (576 aa)
initn: 1803 init1: 1803 opt: 2666 Z-score: 2932.0 bits: 552.1 E(): 1.3e-154
Smith-Waterman score: 2666; 91.051% identity (93.736% similar) in 447 aa overlap (13-453:131-576)
10 20 30
mKIAA4 GSARPSVEARPRPGPRTLRSSP---VLPATTSLSPGDQPSRS
:: : . : .. : :. . . :
gi|739 AEPAEVGPQVCGSGVGDQPDTWIISNGERTPGRRRTGARPGALAVGADRPLARSALAAPS
110 120 130 140 150 160
40 50 60 70 80 90
mKIAA4 RRLRARRLAGSGLKMDE---GGGGEGGSVPEDLSLEEREELLDIRRRKKELIDDIERLKY
: . .:::: ::: :::::::.::::::::::::::::::::::::::::::::
gi|739 ARGPGLAGSGSGLYMDEDGGGGGGEGGGVPEDLSLEEREELLDIRRRKKELIDDIERLKY
170 180 190 200 210 220
100 110 120 130 140 150
mKIAA4 EIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
gi|739 EIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQNSPEDVAQ
230 240 250 260 270 280
160 170 180 190 200 210
mKIAA4 FLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 FLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQ
290 300 310 320 330 340
220 230 240 250 260 270
mKIAA4 KIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFITMNR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
gi|739 KIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFVTMNR
350 360 370 380 390 400
280 290 300 310 320 330
mKIAA4 GINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLGGGRVKTWK
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
gi|739 GINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLGG-RVKTWK
410 420 430 440 450
340 350 360 370 380 390
mKIAA4 RRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIKAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 RRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIKAC
460 470 480 490 500 510
400 410 420 430 440 450
mKIAA4 KTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLATRKRRIANKK
:::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
gi|739 KTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIRASISRDPFYDMLATRKRRIANKK
520 530 540 550 560 570
>>gi|13124042|sp|O43739.2|CYH3_HUMAN RecName: Full=Cytoh (400 aa)
initn: 2663 init1: 2663 opt: 2663 Z-score: 2930.8 bits: 551.3 E(): 1.5e-154
Smith-Waterman score: 2663; 99.000% identity (99.750% similar) in 400 aa overlap (54-453:1-400)
30 40 50 60 70 80
mKIAA4 LPATTSLSPGDQPSRSRRLRARRLAGSGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRR
::: ::::::.:::::::::::::::::::
gi|131 MDEDGGGEGGGVPEDLSLEEREELLDIRRR
10 20 30
90 100 110 120 130 140
mKIAA4 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE
40 50 60 70 80 90
150 160 170 180 190 200
mKIAA4 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
gi|131 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNLVQALR
100 110 120 130 140 150
210 220 230 240 250 260
mKIAA4 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR
160 170 180 190 200 210
270 280 290 300 310 320
mKIAA4 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW
:::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 DKPTAERFIAMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW
220 230 240 250 260 270
330 340 350 360 370 380
mKIAA4 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL
280 290 300 310 320 330
390 400 410 420 430 440
mKIAA4 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA
340 350 360 370 380 390
450
mKIAA4 TRKRRIANKK
::::::::::
gi|131 TRKRRIANKK
400
>>gi|74214402|dbj|BAE40437.1| unnamed protein product [M (399 aa)
initn: 1834 init1: 1834 opt: 2658 Z-score: 2925.3 bits: 550.3 E(): 3.1e-154
Smith-Waterman score: 2658; 99.500% identity (99.500% similar) in 400 aa overlap (54-453:1-399)
30 40 50 60 70 80
mKIAA4 LPATTSLSPGDQPSRSRRLRARRLAGSGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRR
::::::::::::::::::::::::::::::
gi|742 MDEGGGGEGGSVPEDLSLEEREELLDIRRR
10 20 30
90 100 110 120 130 140
mKIAA4 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE
40 50 60 70 80 90
150 160 170 180 190 200
mKIAA4 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR
100 110 120 130 140 150
210 220 230 240 250 260
mKIAA4 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR
160 170 180 190 200 210
270 280 290 300 310 320
mKIAA4 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW
220 230 240 250 260 270
330 340 350 360 370 380
mKIAA4 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL
:::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|742 LLKLGG-RVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL
280 290 300 310 320
390 400 410 420 430 440
mKIAA4 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA
::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
gi|742 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISGDPFYDMLA
330 340 350 360 370 380
450
mKIAA4 TRKRRIANKK
::::::::::
gi|742 TRKRRIANKK
390
>>gi|2909437|emb|CAA11686.1| ARNO3 [Homo sapiens] gi (399 aa)
initn: 1809 init1: 1809 opt: 2643 Z-score: 2908.8 bits: 547.3 E(): 2.6e-153
Smith-Waterman score: 2643; 98.750% identity (99.500% similar) in 400 aa overlap (54-453:1-399)
30 40 50 60 70 80
mKIAA4 LPATTSLSPGDQPSRSRRLRARRLAGSGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRR
::: ::::::.:::::::::::::::::::
gi|290 MDEDGGGEGGGVPEDLSLEEREELLDIRRR
10 20 30
90 100 110 120 130 140
mKIAA4 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|290 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE
40 50 60 70 80 90
150 160 170 180 190 200
mKIAA4 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
gi|290 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNLVQALR
100 110 120 130 140 150
210 220 230 240 250 260
mKIAA4 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|290 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR
160 170 180 190 200 210
270 280 290 300 310 320
mKIAA4 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW
:::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::
gi|290 DKPTAERFIAMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW
220 230 240 250 260 270
330 340 350 360 370 380
mKIAA4 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL
:::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|290 LLKLGG-RVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL
280 290 300 310 320
390 400 410 420 430 440
mKIAA4 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|290 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA
330 340 350 360 370 380
450
mKIAA4 TRKRRIANKK
::::::::::
gi|290 TRKRRIANKK
390
>>gi|189053963|dbj|BAG36470.1| unnamed protein product [ (399 aa)
initn: 1807 init1: 1807 opt: 2641 Z-score: 2906.6 bits: 546.9 E(): 3.4e-153
Smith-Waterman score: 2641; 98.750% identity (99.500% similar) in 400 aa overlap (54-453:1-399)
30 40 50 60 70 80
mKIAA4 LPATTSLSPGDQPSRSRRLRARRLAGSGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRR
::: ::::::.:::::::::::::::::::
gi|189 MDEDGGGEGGGVPEDLSLEEREELLDIRRR
10 20 30
90 100 110 120 130 140
mKIAA4 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE
40 50 60 70 80 90
150 160 170 180 190 200
mKIAA4 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
gi|189 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNLVQALR
100 110 120 130 140 150
210 220 230 240 250 260
mKIAA4 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 QLLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR
160 170 180 190 200 210
270 280 290 300 310 320
mKIAA4 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW
220 230 240 250 260 270
330 340 350 360 370 380
mKIAA4 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL
:::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 LLKLGG-RVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL
280 290 300 310 320
390 400 410 420 430 440
mKIAA4 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|189 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA
330 340 350 360 370 380
450
mKIAA4 TRKRRIANKK
::::::::::
gi|189 TRKRRIANKK
390
>>gi|149755401|ref|XP_001493784.1| PREDICTED: similar to (480 aa)
initn: 1751 init1: 1751 opt: 2582 Z-score: 2840.7 bits: 534.9 E(): 1.6e-149
Smith-Waterman score: 2582; 99.229% identity (99.743% similar) in 389 aa overlap (65-453:93-480)
40 50 60 70 80 90
mKIAA4 QPSRSRRLRARRLAGSGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRRKKELIDDIERL
::::::::::::::::::::::::::::::
gi|149 RSLRPGPFSACLQAPLGQQYLALLEESVVPVPEDLSLEEREELLDIRRRKKELIDDIERL
70 80 90 100 110 120
100 110 120 130 140 150
mKIAA4 KYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 KYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDV
130 140 150 160 170 180
160 170 180 190 200 210
mKIAA4 AQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALRQFLWSFRLPGE
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
gi|149 AQFLYKGEGLNKTVIGDYLGERDDFNIRVLQAFVELHEFADLNLVQALRQFLWSFRLPGE
190 200 210 220 230 240
220 230 240 250 260 270
mKIAA4 AQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFITM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 AQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFITM
250 260 270 280 290 300
280 290 300 310 320 330
mKIAA4 NRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLGGGRVKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::
gi|149 NRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLGG-RVKT
310 320 330 340 350 360
340 350 360 370 380 390
mKIAA4 WKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 WKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIK
370 380 390 400 410 420
400 410 420 430 440 450
mKIAA4 ACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLATRKRRIANKK
:::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
gi|149 ACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIRASISRDPFYDMLATRKRRIANKK
430 440 450 460 470 480
453 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Wed Mar 18 06:57:04 2009 done: Wed Mar 18 07:03:50 2009
Total Scan time: 913.650 Total Display time: 0.110
Function used was FASTA [version 34.26.5 April 26, 2007]