# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj17221.fasta.nr -Q ../query/mKIAA4241.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4241, 453 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7918195 sequences Expectation_n fit: rho(ln(x))= 5.3220+/-0.000186; mu= 11.4097+/- 0.010 mean_var=82.6945+/-16.050, 0's: 41 Z-trim: 57 B-trim: 0 in 0/68 Lambda= 0.141038 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|109065915|ref|XP_001109483.1| PREDICTED: simila ( 514) 2698 558.6 1.3e-156 gi|13124032|sp|P97696.1|CYH3_RAT RecName: Full=Cyt ( 400) 2688 556.4 4.5e-156 gi|13124039|sp|O08967.1|CYH3_MOUSE RecName: Full=C ( 399) 2668 552.4 7.6e-155 gi|26331224|dbj|BAC29342.1| unnamed protein produc ( 399) 2667 552.2 8.7e-155 gi|73958135|ref|XP_851399.1| PREDICTED: similar to ( 576) 2666 552.1 1.3e-154 gi|13124042|sp|O43739.2|CYH3_HUMAN RecName: Full=C ( 400) 2663 551.3 1.5e-154 gi|74214402|dbj|BAE40437.1| unnamed protein produc ( 399) 2658 550.3 3.1e-154 gi|2909437|emb|CAA11686.1| ARNO3 [Homo sapiens] ( 399) 2643 547.3 2.6e-153 gi|189053963|dbj|BAG36470.1| unnamed protein produ ( 399) 2641 546.9 3.4e-153 gi|149755401|ref|XP_001493784.1| PREDICTED: simila ( 480) 2582 534.9 1.6e-149 gi|149636788|ref|XP_001507855.1| PREDICTED: simila ( 453) 2576 533.7 3.6e-149 gi|50755888|ref|XP_414927.1| PREDICTED: similar to ( 397) 2566 531.6 1.3e-148 gi|126334362|ref|XP_001377512.1| PREDICTED: simila ( 401) 2539 526.1 6.1e-147 gi|116487434|gb|AAI25678.1| Hypothetical protein M ( 394) 2538 525.9 6.9e-147 gi|13938146|gb|AAH07189.1| Cyth3 protein [Mus musc ( 377) 2519 522.0 9.7e-146 gi|47218018|emb|CAG11423.1| unnamed protein produc ( 388) 2439 505.8 7.9e-141 gi|189525884|ref|XP_001342037.2| PREDICTED: simila ( 396) 2424 502.7 6.6e-140 gi|224070505|ref|XP_002197249.1| PREDICTED: plecks ( 374) 2414 500.7 2.6e-139 gi|148687092|gb|EDL19039.1| pleckstrin homology, S ( 351) 2361 489.8 4.4e-136 gi|189517332|ref|XP_687114.3| PREDICTED: hypotheti ( 372) 2335 484.6 1.8e-134 gi|53127634|emb|CAG31146.1| hypothetical protein [ ( 398) 2304 478.3 1.5e-132 gi|115313031|gb|AAI24140.1| Pleckstrin homology, S ( 399) 2278 473.0 5.9e-131 gi|114670727|ref|XP_001157634.1| PREDICTED: plecks ( 409) 2278 473.0 6e-131 gi|2498175|sp|Q15438.1|CYH1_HUMAN RecName: Full=Cy ( 398) 2277 472.8 6.7e-131 gi|109118718|ref|XP_001108375.1| PREDICTED: plecks ( 400) 2277 472.8 6.8e-131 gi|73964781|ref|XP_848819.1| PREDICTED: similar to ( 400) 2277 472.8 6.8e-131 gi|161761053|pdb|2R0D|A Chain A, Crystal Structure ( 347) 2273 471.9 1.1e-130 gi|74196593|dbj|BAE34408.1| unnamed protein produc ( 400) 2265 470.4 3.7e-130 gi|46310219|gb|AAS87372.1| cytohesin 1-like protei ( 398) 2258 468.9 9.8e-130 gi|119609937|gb|EAW89531.1| pleckstrin homology, S ( 397) 2257 468.7 1.1e-129 gi|73964783|ref|XP_857200.1| PREDICTED: similar to ( 399) 2257 468.7 1.1e-129 gi|119609938|gb|EAW89532.1| pleckstrin homology, S ( 399) 2257 468.7 1.1e-129 gi|13124031|sp|P97694.1|CYH1_RAT RecName: Full=Cyt ( 398) 2254 468.1 1.7e-129 gi|13124083|sp|Q9QX11.1|CYH1_MOUSE RecName: Full=C ( 398) 2254 468.1 1.7e-129 gi|149723497|ref|XP_001490946.1| PREDICTED: plecks ( 409) 2254 468.1 1.8e-129 gi|74186302|dbj|BAE42931.1| unnamed protein produc ( 398) 2251 467.5 2.6e-129 gi|3660535|dbj|BAA33428.1| cytohesin 1 [Mus muscul ( 397) 2234 464.1 2.9e-128 gi|223649290|gb|ACN11403.1| Cytohesin-1 [Salmo sal ( 416) 2231 463.5 4.6e-128 gi|73947173|ref|XP_852119.1| PREDICTED: similar to ( 400) 2225 462.2 1e-127 gi|12248406|dbj|BAB20093.1| unnamed protein produc ( 400) 2223 461.8 1.4e-127 gi|13124707|sp|Q99418.2|CYH2_HUMAN RecName: Full=C ( 400) 2221 461.4 1.8e-127 gi|189529443|ref|XP_697830.3| PREDICTED: similar t ( 400) 2219 461.0 2.4e-127 gi|24324832|gb|AAH38713.1| Cytohesin 2 [Homo sapie ( 400) 2214 460.0 4.9e-127 gi|51702229|sp|P63035.1|CYH2_RAT RecName: Full=Cyt ( 400) 2212 459.6 6.5e-127 gi|7188363|gb|AAF37738.1| cytohesin 1 [Homo sapien ( 390) 2211 459.4 7.3e-127 gi|73947163|ref|XP_864950.1| PREDICTED: similar to ( 399) 2205 458.2 1.7e-126 gi|161761051|pdb|2R09|A Chain A, Crystal Structure ( 347) 2201 457.3 2.7e-126 gi|75072501|sp|Q76MY7.1|CYH2_CERAE RecName: Full=C ( 399) 2201 457.3 3e-126 gi|57032763|gb|AAH88833.1| Cytohesin 2 [Mus muscul ( 400) 2201 457.3 3.1e-126 gi|109125469|ref|XP_001111690.1| PREDICTED: simila ( 528) 2201 457.4 3.8e-126 >>gi|109065915|ref|XP_001109483.1| PREDICTED: similar to (514 aa) initn: 1862 init1: 1833 opt: 2698 Z-score: 2967.8 bits: 558.6 E(): 1.3e-156 Smith-Waterman score: 2698; 91.028% identity (93.873% similar) in 457 aa overlap (5-453:62-514) 10 20 mKIAA4 GSARPSVEARP---RPG--P-RTLRSSPVLPATT :. :: : ::: : : ::: :: . gi|109 GPGRSPRAGPRGPTPHPLRAEAGHGSRDGTPNSEAPPGGRRPGRDPGRELRSRPV---SR 40 50 60 70 80 30 40 50 60 70 80 mKIAA4 SLSPGDQPSRSRRLRARRLAG--SGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRRKKE .:.:. .:. . . . ::: ::::::: ::::::.:::::::::::::::::::::: gi|109 ALAPAASPALGPSVAGLRLADCESGLKMDEDGGGEGGGVPEDLSLEEREELLDIRRRKKE 90 100 110 120 130 140 90 100 110 120 130 140 mKIAA4 LIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDL 150 160 170 180 190 200 150 160 170 180 190 200 mKIAA4 LQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALRQFL :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|109 LQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNLVQALRQFL 210 220 230 240 250 260 210 220 230 240 250 260 mKIAA4 WSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 WSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKP 270 280 290 300 310 320 270 280 290 300 310 320 mKIAA4 TAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLK ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TAERFIAMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLK 330 340 350 360 370 380 330 340 350 360 370 380 mKIAA4 LGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFELYNP ::: ::::::::::::::::::::::::::: :: :::::::::::::::::::::::: gi|109 LGG-RVKTWKRRWFILTDNCLYYFEYTTDKEHRGKKPLENLSIREVEDPRKPNCFELYNP 390 400 410 420 430 440 390 400 410 420 430 440 mKIAA4 SHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLATRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLATRK 450 460 470 480 490 500 450 mKIAA4 RRIANKK ::::::: gi|109 RRIANKK 510 >>gi|13124032|sp|P97696.1|CYH3_RAT RecName: Full=Cytohes (400 aa) initn: 2688 init1: 2688 opt: 2688 Z-score: 2958.3 bits: 556.4 E(): 4.5e-156 Smith-Waterman score: 2688; 100.000% identity (100.000% similar) in 400 aa overlap (54-453:1-400) 30 40 50 60 70 80 mKIAA4 LPATTSLSPGDQPSRSRRLRARRLAGSGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRR :::::::::::::::::::::::::::::: gi|131 MDEGGGGEGGSVPEDLSLEEREELLDIRRR 10 20 30 90 100 110 120 130 140 mKIAA4 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA4 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA 340 350 360 370 380 390 450 mKIAA4 TRKRRIANKK :::::::::: gi|131 TRKRRIANKK 400 >>gi|13124039|sp|O08967.1|CYH3_MOUSE RecName: Full=Cytoh (399 aa) initn: 1834 init1: 1834 opt: 2668 Z-score: 2936.3 bits: 552.4 E(): 7.6e-155 Smith-Waterman score: 2668; 99.750% identity (99.750% similar) in 400 aa overlap (54-453:1-399) 30 40 50 60 70 80 mKIAA4 LPATTSLSPGDQPSRSRRLRARRLAGSGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRR :::::::::::::::::::::::::::::: gi|131 MDEGGGGEGGSVPEDLSLEEREELLDIRRR 10 20 30 90 100 110 120 130 140 mKIAA4 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 LLKLGG-RVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL 280 290 300 310 320 390 400 410 420 430 440 mKIAA4 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA 330 340 350 360 370 380 450 mKIAA4 TRKRRIANKK :::::::::: gi|131 TRKRRIANKK 390 >>gi|26331224|dbj|BAC29342.1| unnamed protein product [M (399 aa) initn: 1834 init1: 1834 opt: 2667 Z-score: 2935.2 bits: 552.2 E(): 8.7e-155 Smith-Waterman score: 2667; 99.500% identity (99.750% similar) in 400 aa overlap (54-453:1-399) 30 40 50 60 70 80 mKIAA4 LPATTSLSPGDQPSRSRRLRARRLAGSGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRR :::::::::::::::::::::::::::::: gi|263 MDEGGGGEGGSVPEDLSLEEREELLDIRRR 10 20 30 90 100 110 120 130 140 mKIAA4 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL :::::: :::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|263 LLKLGG-RVKTWKRRWFILTDNCLYYFEYTTDKEPRGIVPLENLSIREVEDPRKPNCFEL 280 290 300 310 320 390 400 410 420 430 440 mKIAA4 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA 330 340 350 360 370 380 450 mKIAA4 TRKRRIANKK :::::::::: gi|263 TRKRRIANKK 390 >>gi|73958135|ref|XP_851399.1| PREDICTED: similar to Cyt (576 aa) initn: 1803 init1: 1803 opt: 2666 Z-score: 2932.0 bits: 552.1 E(): 1.3e-154 Smith-Waterman score: 2666; 91.051% identity (93.736% similar) in 447 aa overlap (13-453:131-576) 10 20 30 mKIAA4 GSARPSVEARPRPGPRTLRSSP---VLPATTSLSPGDQPSRS :: : . : .. : :. . . : gi|739 AEPAEVGPQVCGSGVGDQPDTWIISNGERTPGRRRTGARPGALAVGADRPLARSALAAPS 110 120 130 140 150 160 40 50 60 70 80 90 mKIAA4 RRLRARRLAGSGLKMDE---GGGGEGGSVPEDLSLEEREELLDIRRRKKELIDDIERLKY : . .:::: ::: :::::::.:::::::::::::::::::::::::::::::: gi|739 ARGPGLAGSGSGLYMDEDGGGGGGEGGGVPEDLSLEEREELLDIRRRKKELIDDIERLKY 170 180 190 200 210 220 100 110 120 130 140 150 mKIAA4 EIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDVAQ ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|739 EIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQNSPEDVAQ 230 240 250 260 270 280 160 170 180 190 200 210 mKIAA4 FLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQ 290 300 310 320 330 340 220 230 240 250 260 270 mKIAA4 KIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFITMNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|739 KIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFVTMNR 350 360 370 380 390 400 280 290 300 310 320 330 mKIAA4 GINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLGGGRVKTWK ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|739 GINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLGG-RVKTWK 410 420 430 440 450 340 350 360 370 380 390 mKIAA4 RRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIKAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIKAC 460 470 480 490 500 510 400 410 420 430 440 450 mKIAA4 KTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLATRKRRIANKK :::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|739 KTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIRASISRDPFYDMLATRKRRIANKK 520 530 540 550 560 570 >>gi|13124042|sp|O43739.2|CYH3_HUMAN RecName: Full=Cytoh (400 aa) initn: 2663 init1: 2663 opt: 2663 Z-score: 2930.8 bits: 551.3 E(): 1.5e-154 Smith-Waterman score: 2663; 99.000% identity (99.750% similar) in 400 aa overlap (54-453:1-400) 30 40 50 60 70 80 mKIAA4 LPATTSLSPGDQPSRSRRLRARRLAGSGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRR ::: ::::::.::::::::::::::::::: gi|131 MDEDGGGEGGGVPEDLSLEEREELLDIRRR 10 20 30 90 100 110 120 130 140 mKIAA4 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|131 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNLVQALR 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 DKPTAERFIAMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA4 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA 340 350 360 370 380 390 450 mKIAA4 TRKRRIANKK :::::::::: gi|131 TRKRRIANKK 400 >>gi|74214402|dbj|BAE40437.1| unnamed protein product [M (399 aa) initn: 1834 init1: 1834 opt: 2658 Z-score: 2925.3 bits: 550.3 E(): 3.1e-154 Smith-Waterman score: 2658; 99.500% identity (99.500% similar) in 400 aa overlap (54-453:1-399) 30 40 50 60 70 80 mKIAA4 LPATTSLSPGDQPSRSRRLRARRLAGSGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRR :::::::::::::::::::::::::::::: gi|742 MDEGGGGEGGSVPEDLSLEEREELLDIRRR 10 20 30 90 100 110 120 130 140 mKIAA4 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LLKLGG-RVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL 280 290 300 310 320 390 400 410 420 430 440 mKIAA4 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|742 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISGDPFYDMLA 330 340 350 360 370 380 450 mKIAA4 TRKRRIANKK :::::::::: gi|742 TRKRRIANKK 390 >>gi|2909437|emb|CAA11686.1| ARNO3 [Homo sapiens] gi (399 aa) initn: 1809 init1: 1809 opt: 2643 Z-score: 2908.8 bits: 547.3 E(): 2.6e-153 Smith-Waterman score: 2643; 98.750% identity (99.500% similar) in 400 aa overlap (54-453:1-399) 30 40 50 60 70 80 mKIAA4 LPATTSLSPGDQPSRSRRLRARRLAGSGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRR ::: ::::::.::::::::::::::::::: gi|290 MDEDGGGEGGGVPEDLSLEEREELLDIRRR 10 20 30 90 100 110 120 130 140 mKIAA4 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|290 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|290 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNLVQALR 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|290 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|290 DKPTAERFIAMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|290 LLKLGG-RVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL 280 290 300 310 320 390 400 410 420 430 440 mKIAA4 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|290 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA 330 340 350 360 370 380 450 mKIAA4 TRKRRIANKK :::::::::: gi|290 TRKRRIANKK 390 >>gi|189053963|dbj|BAG36470.1| unnamed protein product [ (399 aa) initn: 1807 init1: 1807 opt: 2641 Z-score: 2906.6 bits: 546.9 E(): 3.4e-153 Smith-Waterman score: 2641; 98.750% identity (99.500% similar) in 400 aa overlap (54-453:1-399) 30 40 50 60 70 80 mKIAA4 LPATTSLSPGDQPSRSRRLRARRLAGSGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRR ::: ::::::.::::::::::::::::::: gi|189 MDEDGGGEGGGVPEDLSLEEREELLDIRRR 10 20 30 90 100 110 120 130 140 mKIAA4 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 KKELIDDIERLKYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIE 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALR ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|189 NDLLQSSPEDVAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNLVQALR 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 QFLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 QLLWSFRLPGEAQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVR 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 DKPTAERFITMNRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGW 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 LLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 LLKLGG-RVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFEL 280 290 300 310 320 390 400 410 420 430 440 mKIAA4 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 YNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLA 330 340 350 360 370 380 450 mKIAA4 TRKRRIANKK :::::::::: gi|189 TRKRRIANKK 390 >>gi|149755401|ref|XP_001493784.1| PREDICTED: similar to (480 aa) initn: 1751 init1: 1751 opt: 2582 Z-score: 2840.7 bits: 534.9 E(): 1.6e-149 Smith-Waterman score: 2582; 99.229% identity (99.743% similar) in 389 aa overlap (65-453:93-480) 40 50 60 70 80 90 mKIAA4 QPSRSRRLRARRLAGSGLKMDEGGGGEGGSVPEDLSLEEREELLDIRRRKKELIDDIERL :::::::::::::::::::::::::::::: gi|149 RSLRPGPFSACLQAPLGQQYLALLEESVVPVPEDLSLEEREELLDIRRRKKELIDDIERL 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA4 KYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KYEIAEVMTEIDNLTSVEESKTTQRNKQIAMGRKKFNMDPKKGIQFLIENDLLQSSPEDV 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA4 AQFLYKGEGLNKTVIGDYLGERDDFNIKVLQAFVELHEFADLNLVQALRQFLWSFRLPGE :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|149 AQFLYKGEGLNKTVIGDYLGERDDFNIRVLQAFVELHEFADLNLVQALRQFLWSFRLPGE 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA4 AQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFITM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AQKIDRMMEAFASRYCLCNPGVFQSTDTCYVLSFAIIMLNTSLHNHNVRDKPTAERFITM 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA4 NRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLGGGRVKT ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|149 NRGINEGGDLPEELLRNLYESIKNEPFKIPEDDGNDLTHTFFNPDREGWLLKLGG-RVKT 310 320 330 340 350 360 340 350 360 370 380 390 mKIAA4 WKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 WKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIK 370 380 390 400 410 420 400 410 420 430 440 450 mKIAA4 ACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRDPFYDMLATRKRRIANKK :::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|149 ACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIRASISRDPFYDMLATRKRRIANKK 430 440 450 460 470 480 453 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Wed Mar 18 06:57:04 2009 done: Wed Mar 18 07:03:50 2009 Total Scan time: 913.650 Total Display time: 0.110 Function used was FASTA [version 34.26.5 April 26, 2007]