# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj14315.fasta.nr -Q ../query/mKIAA1912.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1912, 516 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7915180 sequences Expectation_n fit: rho(ln(x))= 6.0709+/-0.000199; mu= 8.8034+/- 0.011 mean_var=123.9886+/-23.652, 0's: 46 Z-trim: 57 B-trim: 0 in 0/66 Lambda= 0.115182 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|109500128|ref|XP_223723.4| PREDICTED: similar t ( 579) 3210 544.6 2.8e-152 gi|148691870|gb|EDL23817.1| coiled-coil domain con ( 453) 3007 510.7 3.4e-142 gi|81862340|sp|Q5SP85.1|CC85A_MOUSE RecName: Full= ( 500) 2950 501.3 2.6e-139 gi|26337467|dbj|BAC32419.1| unnamed protein produc ( 500) 2945 500.5 4.6e-139 gi|151554233|gb|AAI48155.1| CCDC85A protein [Bos t ( 457) 2840 483.0 7.7e-134 gi|26352307|dbj|BAC39790.1| unnamed protein produc ( 420) 2779 472.8 8.1e-131 gi|149727558|ref|XP_001496018.1| PREDICTED: simila ( 547) 2696 459.1 1.4e-126 gi|149044832|gb|EDL98018.1| rCG23305 [Rattus norve ( 421) 2690 458.0 2.3e-126 gi|122056145|sp|Q96PX6.2|CC85A_HUMAN RecName: Full ( 553) 2684 457.1 5.6e-126 gi|119620482|gb|EAX00077.1| hCG1994544, isoform CR ( 553) 2678 456.1 1.1e-125 gi|114577462|ref|XP_525759.2| PREDICTED: coiled-co ( 553) 2662 453.5 7e-125 gi|126303840|ref|XP_001375138.1| PREDICTED: simila ( 493) 2412 411.9 2.1e-112 gi|18088059|gb|AAH20949.1| Ccdc85a protein [Mus mu ( 415) 2408 411.1 2.9e-112 gi|126303838|ref|XP_001375112.1| PREDICTED: simila ( 538) 2403 410.4 6.2e-112 gi|73970173|ref|XP_538498.2| PREDICTED: similar to ( 369) 2092 358.6 1.7e-96 gi|224047476|ref|XP_002196938.1| PREDICTED: simila ( 556) 1980 340.1 9.2e-91 gi|41946296|gb|AAH66065.1| Ccdc85a protein [Mus mu ( 432) 1818 313.1 9.8e-83 gi|109102970|ref|XP_001115006.1| PREDICTED: simila ( 391) 1765 304.3 4.1e-80 gi|160773470|gb|AAI55336.1| Zgc:175167 protein [Da ( 408) 1078 190.1 9.8e-46 gi|220678503|emb|CAX13568.1| novel protein (zgc:17 ( 421) 1062 187.5 6.3e-45 gi|51859099|gb|AAH81674.1| Zgc:92780 [Danio rerio] ( 367) 975 173.0 1.3e-40 gi|126290509|ref|XP_001374725.1| PREDICTED: simila ( 399) 911 162.4 2.2e-37 gi|47220294|emb|CAG03328.1| unnamed protein produc ( 483) 906 161.6 4.4e-37 gi|118092158|ref|XP_421357.2| PREDICTED: hypotheti ( 392) 897 160.0 1.1e-36 gi|123885901|sp|Q0V989.1|CC85C_XENTR RecName: Full ( 391) 881 157.4 6.8e-36 gi|82225940|sp|Q4V872.1|CC85C_XENLA RecName: Full= ( 390) 877 156.7 1.1e-35 gi|123885765|sp|Q0P485.1|C85CA_DANRE RecName: Full ( 391) 866 154.9 3.8e-35 gi|47222665|emb|CAG00099.1| unnamed protein produc ( 232) 858 153.3 6.7e-35 gi|82183295|sp|Q6DHL7.1|C85CB_DANRE RecName: Full= ( 399) 855 153.1 1.4e-34 gi|47222403|emb|CAG05152.1| unnamed protein produc ( 219) 817 146.5 7.2e-33 gi|47206997|emb|CAF90855.1| unnamed protein produc ( 310) 789 142.0 2.3e-31 gi|109478723|ref|XP_001076332.1| PREDICTED: simila ( 420) 774 139.6 1.6e-30 gi|94393134|ref|XP_999742.1| PREDICTED: similar to ( 420) 771 139.1 2.3e-30 gi|149263697|ref|XP_001478633.1| PREDICTED: simila ( 420) 770 139.0 2.5e-30 gi|222418617|ref|NP_001138470.1| coiled-coil domai ( 424) 757 136.8 1.1e-29 gi|206558286|sp|A6NKD9.1|CC85C_HUMAN RecName: Full ( 419) 732 132.6 2e-28 gi|119602080|gb|EAW81674.1| hCG2040348 [Homo sapie ( 378) 727 131.8 3.3e-28 gi|210095067|gb|EEA43238.1| hypothetical protein B ( 187) 707 128.1 2e-27 gi|149626837|ref|XP_001515266.1| PREDICTED: simila ( 154) 663 120.7 2.8e-25 gi|148686772|gb|EDL18719.1| mCG115914 [Mus musculu ( 151) 658 119.9 5e-25 gi|126031775|gb|AAI31558.1| CCDC85A protein [Homo ( 277) 660 120.5 6e-25 gi|198414449|ref|XP_002129974.1| PREDICTED: simila ( 404) 637 116.8 1.1e-23 gi|122891216|emb|CAM12897.1| novel protein similar ( 200) 587 108.2 2.2e-21 gi|111305711|gb|AAI21484.1| LOC779472 protein [Xen ( 236) 587 108.3 2.4e-21 gi|47225293|emb|CAG09793.1| unnamed protein produc ( 200) 575 106.2 8.6e-21 gi|221136868|ref|NP_001137559.1| coiled-coil domai ( 202) 563 104.2 3.4e-20 gi|71159289|sp|Q6PDY0.1|CC85B_MOUSE RecName: Full= ( 202) 561 103.9 4.3e-20 gi|73983041|ref|XP_852688.1| PREDICTED: similar to ( 202) 558 103.4 6.1e-20 gi|224052083|ref|XP_002188786.1| PREDICTED: hypoth ( 117) 552 102.2 8.4e-20 gi|92090801|sp|Q15834.2|CC85B_HUMAN RecName: Full= ( 202) 555 102.9 8.7e-20 >>gi|109500128|ref|XP_223723.4| PREDICTED: similar to De (579 aa) initn: 3197 init1: 3197 opt: 3210 Z-score: 2890.2 bits: 544.6 E(): 2.8e-152 Smith-Waterman score: 3320; 88.489% identity (91.727% similar) in 556 aa overlap (1-516:24-579) 10 20 30 mKIAA1 DGHAARFLPSPRSGPPEVPLTLEAYRGVGGGHPAAPA ::.::: ::::::: ::::::::.::::::.::::: gi|109 MDLLGVGVDHSSGQELAVGPRDSDGRAARSSPSPRSGPREVPLTLEAHRGVGGGRPAAPA 10 20 30 40 50 60 40 50 60 70 80 90 mKIAA1 PSPVVSPLPPTRTCRCADTMSKAAGGSAPAAESCPSAPAGASTPTGVDDLSKVTDEELLQ ::::.:::::::::::::::::::::.:::::::::::::.:::.::.:::::::::::: gi|109 PSPVLSPLPPTRTCRCADTMSKAAGGAAPAAESCPSAPAGVSTPAGVEDLSKVTDEELLQ 70 80 90 100 110 120 100 110 120 130 140 150 mKIAA1 WSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDINQKLQEDNQELR ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 WSKEDLIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDINQKLQEDNQELR 130 140 150 160 170 180 160 170 180 190 200 210 mKIAA1 DLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQEEVVKENMELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQEEVVKENMELK 190 200 210 220 230 240 220 230 240 250 260 270 mKIAA1 ELCMLLDEEKGVGCAGSRCSIDSQASLCQLVASATPYVRDVGDGSSTSSTGSTDSPDHHK :::.:::::::.::::::::::::::::::::::.::::::::::::::::::::::::: gi|109 ELCVLLDEEKGTGCAGSRCSIDSQASLCQLVASAAPYVRDVGDGSSTSSTGSTDSPDHHK 250 260 270 280 290 300 280 290 300 310 320 330 mKIAA1 HHASGGSPEHLQKPRSEGSPEHTKHRSTSPEHLHKPRASGTPDHSKALKGPSPEHHKPLC ::::::::::::::::::::::.::::::::::::::::::::: ::::::::::::::: gi|109 HHASGGSPEHLQKPRSEGSPEHNKHRSTSPEHLHKPRASGTPDHPKALKGPSPEHHKPLC 310 320 330 340 350 360 340 350 360 370 380 390 mKIAA1 KGSPEQQRHPHPGSSPEVLPKHVLSGSPEHFQKHRPGGSPEHTRHSGGSPEHLQKHALGG :::::::::::::::::.:::: :::::::::::::::::::.::::::::::::::::: gi|109 KGSPEQQRHPHPGSSPEMLPKHKLSGSPEHFQKHRPGGSPEHARHSGGSPEHLQKHALGG 370 380 390 400 410 420 400 410 420 430 440 450 mKIAA1 SLEHLPRARGTSPEHLKQHYGASPDHKHASGSGGSGGGSREGTLRRPAQEDSSSHHRNVY :::::::::::::::::::::.:::::::.:.::::::::::::::::::::: :::::: gi|109 SLEHLPRARGTSPEHLKQHYGGSPDHKHAGGGGGSGGGSREGTLRRPAQEDSSPHHRNVY 430 440 450 460 470 480 460 470 480 mKIAA1 SGMNESTLSYVRQLEARVRQLEEENRMLPQ------------------------------ :::::::::::::::::::::::::::::: gi|109 SGMNESTLSYVRQLEARVRQLEEENRMLPQGSFRLSSGADGNNSSPNSPASFSGHTTPSQ 490 500 510 520 530 540 490 500 510 mKIAA1 ----------VVWRKLGDAAGSCPGIRQHLSGNQYKGPM ::::::::::::::::::::::::::::: gi|109 QPEPVVHSLKVVWRKLGDAAGSCPGIRQHLSGNQYKGPM 550 560 570 >>gi|148691870|gb|EDL23817.1| coiled-coil domain contain (453 aa) initn: 3007 init1: 3007 opt: 3007 Z-score: 2709.2 bits: 510.7 E(): 3.4e-142 Smith-Waterman score: 3007; 99.772% identity (99.772% similar) in 438 aa overlap (24-461:1-438) 10 20 30 40 50 60 mKIAA1 DGHAARFLPSPRSGPPEVPLTLEAYRGVGGGHPAAPAPSPVVSPLPPTRTCRCADTMSKA ::::::::::::::::::::::::::::: ::::::: gi|148 AYRGVGGGHPAAPAPSPVVSPLPPTRTCRRADTMSKA 10 20 30 70 80 90 100 110 120 mKIAA1 AGGSAPAAESCPSAPAGASTPTGVDDLSKVTDEELLQWSKEELIRSLRRAEAEKVSAMLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AGGSAPAAESCPSAPAGASTPTGVDDLSKVTDEELLQWSKEELIRSLRRAEAEKVSAMLD 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 HSNLIREVNRRLQLHLGEIRGLKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HSNLIREVNRRLQLHLGEIRGLKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRL 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 GRYTAGVMHKEVALYLQKLKELEVKQEEVVKENMELKELCMLLDEEKGVGCAGSRCSIDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GRYTAGVMHKEVALYLQKLKELEVKQEEVVKENMELKELCMLLDEEKGVGCAGSRCSIDS 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 QASLCQLVASATPYVRDVGDGSSTSSTGSTDSPDHHKHHASGGSPEHLQKPRSEGSPEHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QASLCQLVASATPYVRDVGDGSSTSSTGSTDSPDHHKHHASGGSPEHLQKPRSEGSPEHT 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 KHRSTSPEHLHKPRASGTPDHSKALKGPSPEHHKPLCKGSPEQQRHPHPGSSPEVLPKHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KHRSTSPEHLHKPRASGTPDHSKALKGPSPEHHKPLCKGSPEQQRHPHPGSSPEVLPKHV 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 LSGSPEHFQKHRPGGSPEHTRHSGGSPEHLQKHALGGSLEHLPRARGTSPEHLKQHYGAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LSGSPEHFQKHRPGGSPEHTRHSGGSPEHLQKHALGGSLEHLPRARGTSPEHLKQHYGAS 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 PDHKHASGSGGSGGGSREGTLRRPAQEDSSSHHRNVYSGMNESTLSYVRQLEARVRQLEE ::::::::::::::::::::::::::::::::::::::::: gi|148 PDHKHASGSGGSGGGSREGTLRRPAQEDSSSHHRNVYSGMNGGSVYAGSCFGLATQ 400 410 420 430 440 450 490 500 510 mKIAA1 ENRMLPQVVWRKLGDAAGSCPGIRQHLSGNQYKGPM >>gi|81862340|sp|Q5SP85.1|CC85A_MOUSE RecName: Full=Coil (500 aa) initn: 2940 init1: 2940 opt: 2950 Z-score: 2657.5 bits: 501.3 E(): 2.6e-139 Smith-Waterman score: 3063; 92.000% identity (92.000% similar) in 500 aa overlap (57-516:1-500) 30 40 50 60 70 80 mKIAA1 GVGGGHPAAPAPSPVVSPLPPTRTCRCADTMSKAAGGSAPAAESCPSAPAGASTPTGVDD :::::::::::::::::::::::::::::: gi|818 MSKAAGGSAPAAESCPSAPAGASTPTGVDD 10 20 30 90 100 110 120 130 140 mKIAA1 LSKVTDEELLQWSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 LSKVTDEELLQWSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDIN 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 QKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 QKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQ 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 EEVVKENMELKELCMLLDEEKGVGCAGSRCSIDSQASLCQLVASATPYVRDVGDGSSTSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 EEVVKENMELKELCMLLDEEKGVGCAGSRCSIDSQASLCQLVASATPYVRDVGDGSSTSS 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA1 TGSTDSPDHHKHHASGGSPEHLQKPRSEGSPEHTKHRSTSPEHLHKPRASGTPDHSKALK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 TGSTDSPDHHKHHASGGSPEHLQKPRSEGSPEHTKHRSTSPEHLHKPRASGTPDHSKALK 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 GPSPEHHKPLCKGSPEQQRHPHPGSSPEVLPKHVLSGSPEHFQKHRPGGSPEHTRHSGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 GPSPEHHKPLCKGSPEQQRHPHPGSSPEVLPKHVLSGSPEHFQKHRPGGSPEHTRHSGGS 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA1 PEHLQKHALGGSLEHLPRARGTSPEHLKQHYGASPDHKHASGSGGSGGGSREGTLRRPAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 PEHLQKHALGGSLEHLPRARGTSPEHLKQHYGASPDHKHASGSGGSGGGSREGTLRRPAQ 340 350 360 370 380 390 450 460 470 480 mKIAA1 EDSSSHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQ------------------- ::::::::::::::::::::::::::::::::::::::::: gi|818 EDSSSHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQGSFRLSSGADGNNSSLNSP 400 410 420 430 440 450 490 500 510 mKIAA1 ---------------------VVWRKLGDAAGSCPGIRQHLSGNQYKGPM ::::::::::::::::::::::::::::: gi|818 ASFSGHTTPSQQPEPVVHSLKVVWRKLGDAAGSCPGIRQHLSGNQYKGPM 460 470 480 490 500 >>gi|26337467|dbj|BAC32419.1| unnamed protein product [M (500 aa) initn: 2935 init1: 2935 opt: 2945 Z-score: 2653.0 bits: 500.5 E(): 4.6e-139 Smith-Waterman score: 3058; 91.800% identity (92.000% similar) in 500 aa overlap (57-516:1-500) 30 40 50 60 70 80 mKIAA1 GVGGGHPAAPAPSPVVSPLPPTRTCRCADTMSKAAGGSAPAAESCPSAPAGASTPTGVDD :::::::::::::::::::::::::::::: gi|263 MSKAAGGSAPAAESCPSAPAGASTPTGVDD 10 20 30 90 100 110 120 130 140 mKIAA1 LSKVTDEELLQWSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LSKVTDEELLQWSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDIN 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 QKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQ 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 EEVVKENMELKELCMLLDEEKGVGCAGSRCSIDSQASLCQLVASATPYVRDVGDGSSTSS ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 EEVVKENMELEELCMLLDEEKGVGCAGSRCSIDSQASLCQLVASATPYVRDVGDGSSTSS 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA1 TGSTDSPDHHKHHASGGSPEHLQKPRSEGSPEHTKHRSTSPEHLHKPRASGTPDHSKALK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 TGSTDSPDHHKHHASGGSPEHLQKPRSEGSPEHTKHRSTSPEHLHKPRASGTPDHSKALK 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 GPSPEHHKPLCKGSPEQQRHPHPGSSPEVLPKHVLSGSPEHFQKHRPGGSPEHTRHSGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GPSPEHHKPLCKGSPEQQRHPHPGSSPEVLPKHVLSGSPEHFQKHRPGGSPEHTRHSGGS 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA1 PEHLQKHALGGSLEHLPRARGTSPEHLKQHYGASPDHKHASGSGGSGGGSREGTLRRPAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PEHLQKHALGGSLEHLPRARGTSPEHLKQHYGASPDHKHASGSGGSGGGSREGTLRRPAQ 340 350 360 370 380 390 450 460 470 480 mKIAA1 EDSSSHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQ------------------- ::::::::::::::::::::::::::::::::::::::::: gi|263 EDSSSHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQGSFRLSSGADGNNSSLNSP 400 410 420 430 440 450 490 500 510 mKIAA1 ---------------------VVWRKLGDAAGSCPGIRQHLSGNQYKGPM ::::::::::::::::::::::::::::: gi|263 ASFSGHTTPSQQPEPVVHSLKVVWRKLGDAAGSCPGIRQHLSGNQYKGPM 460 470 480 490 500 >>gi|151554233|gb|AAI48155.1| CCDC85A protein [Bos tauru (457 aa) initn: 2033 init1: 1287 opt: 2840 Z-score: 2559.2 bits: 483.0 E(): 7.7e-134 Smith-Waterman score: 2840; 90.652% identity (96.522% similar) in 460 aa overlap (57-516:1-457) 30 40 50 60 70 80 mKIAA1 GVGGGHPAAPAPSPVVSPLPPTRTCRCADTMSKAAGGSAPAAESCPSAPAGASTPTGVDD :::.::: : :::::: . :: :. ..:.: gi|151 MSKTAGG-ASAAESCPPTSAGPSAAAAVED 10 20 90 100 110 120 130 140 mKIAA1 LSKVTDEELLQWSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDIN ::::.:::::::::::::: :::::::::::::::::::::::::::::::::::::::: gi|151 LSKVSDEELLQWSKEELIRCLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDIN 30 40 50 60 70 80 150 160 170 180 190 200 mKIAA1 QKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 QKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQ 90 100 110 120 130 140 210 220 230 240 250 260 mKIAA1 EEVVKENMELKELCMLLDEEKGVGCAGSRCSIDSQASLCQLVASATPYVRDVGDGSSTSS ::::::::::::::.::::::: :::::::::::::::::: :...:::::::::::::: gi|151 EEVVKENMELKELCVLLDEEKGPGCAGSRCSIDSQASLCQLSATTAPYVRDVGDGSSTSS 150 160 170 180 190 200 270 280 290 300 310 320 mKIAA1 TGSTDSPDHHKHHASGGSPEHLQKPRSEGSPEHTKHRSTSPEHLHKPRASGTPDHSKALK ::::::::: ::::::.:::::::::.::::::.:: :.:::::.: :::::::: :::: gi|151 TGSTDSPDH-KHHASGSSPEHLQKPRAEGSPEHSKHGSASPEHLQKARASGTPDHPKALK 210 220 230 240 250 260 330 340 350 360 370 380 mKIAA1 GPSPEHHKPLCKGSPEQQRHPHPGSSPEVLPKHVLSGSPEHFQKHRPGGSPEHTRHSGGS :::::::::::::::::::::: :.:::.::::::::::::::::::::::::::::::: gi|151 GPSPEHHKPLCKGSPEQQRHPHAGNSPETLPKHVLSGSPEHFQKHRPGGSPEHTRHSGGS 270 280 290 300 310 320 390 400 410 420 430 440 mKIAA1 PEHLQKHALGGSLEHLPRARGTSPEHLKQHYGASPDHKHASGSGGSGGGSREGTLRRPAQ ::::::::::::::::::.:::::::::::.:.::::::. :.::::..:::::::: :: gi|151 PEHLQKHALGGSLEHLPRVRGTSPEHLKQHFGGSPDHKHV-GGGGSGSSSREGTLRRQAQ 330 340 350 360 370 380 450 460 470 480 490 500 mKIAA1 EDSSSHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQVVWRKLGDAAGSCPGIRQH ::.:.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 EDASAHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQVVWRKLGDAAGSCPGIRQH 390 400 410 420 430 440 510 mKIAA1 LSGNQYKGPM :::::::::: gi|151 LSGNQYKGPM 450 >>gi|26352307|dbj|BAC39790.1| unnamed protein product [M (420 aa) initn: 2779 init1: 2779 opt: 2779 Z-score: 2504.9 bits: 472.8 E(): 8.1e-131 Smith-Waterman score: 2779; 100.000% identity (100.000% similar) in 405 aa overlap (57-461:1-405) 30 40 50 60 70 80 mKIAA1 GVGGGHPAAPAPSPVVSPLPPTRTCRCADTMSKAAGGSAPAAESCPSAPAGASTPTGVDD :::::::::::::::::::::::::::::: gi|263 MSKAAGGSAPAAESCPSAPAGASTPTGVDD 10 20 30 90 100 110 120 130 140 mKIAA1 LSKVTDEELLQWSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LSKVTDEELLQWSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDIN 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 QKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQ 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 EEVVKENMELKELCMLLDEEKGVGCAGSRCSIDSQASLCQLVASATPYVRDVGDGSSTSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 EEVVKENMELKELCMLLDEEKGVGCAGSRCSIDSQASLCQLVASATPYVRDVGDGSSTSS 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA1 TGSTDSPDHHKHHASGGSPEHLQKPRSEGSPEHTKHRSTSPEHLHKPRASGTPDHSKALK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 TGSTDSPDHHKHHASGGSPEHLQKPRSEGSPEHTKHRSTSPEHLHKPRASGTPDHSKALK 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 GPSPEHHKPLCKGSPEQQRHPHPGSSPEVLPKHVLSGSPEHFQKHRPGGSPEHTRHSGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GPSPEHHKPLCKGSPEQQRHPHPGSSPEVLPKHVLSGSPEHFQKHRPGGSPEHTRHSGGS 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA1 PEHLQKHALGGSLEHLPRARGTSPEHLKQHYGASPDHKHASGSGGSGGGSREGTLRRPAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PEHLQKHALGGSLEHLPRARGTSPEHLKQHYGASPDHKHASGSGGSGGGSREGTLRRPAQ 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA1 EDSSSHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQVVWRKLGDAAGSCPGIRQH ::::::::::::::: gi|263 EDSSSHHRNVYSGMNGGSVYAGSCFGLATQ 400 410 420 >>gi|149727558|ref|XP_001496018.1| PREDICTED: similar to (547 aa) initn: 2713 init1: 2370 opt: 2696 Z-score: 2428.9 bits: 459.1 E(): 1.4e-126 Smith-Waterman score: 2728; 78.062% identity (82.450% similar) in 547 aa overlap (57-516:1-547) 30 40 50 60 70 80 mKIAA1 GVGGGHPAAPAPSPVVSPLPPTRTCRCADTMSKAAGGSAPAA-ESCPSAPAGASTPTGVD ::::::..: :: :::::: :. :. ..:. gi|149 MSKAAGSAAAAAAESCPSASASPSAAAAVE 10 20 30 90 100 110 120 130 140 mKIAA1 DLSKVTDEELLQWSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDI :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DLSKVSDEELLQWSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDI 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 NQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVK 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 QEEVVKENMELKELCMLLDEEKGVGCAGSRCSIDSQASLCQLVASATPYVRDVGDGSSTS :::::::::::::::.:::::::.::::::::::::::::::.::..::::::::::::: gi|149 QEEVVKENMELKELCVLLDEEKGTGCAGSRCSIDSQASLCQLAASTAPYVRDVGDGSSTS 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA1 STGSTDSPDHHKHHASGGSPEHLQKPRSEGSPEHTKHRSTSPEHLHKPRASGTPDHSKAL ::::::::::::::::.::::::::::.::::::.::::::::::.:::::::::: ::: gi|149 STGSTDSPDHHKHHASSGSPEHLQKPRGEGSPEHSKHRSTSPEHLQKPRASGTPDHPKAL 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 KGPSPEHHKPLCKGSPEQQRHPHPGSSPEVLPKHVLSGSPEHFQKHRPGGSPEHTRHSGG ::::::::::: :::::::::::::::::.:::::::::::::::::::::::::::::: gi|149 KGPSPEHHKPLGKGSPEQQRHPHPGSSPETLPKHVLSGSPEHFQKHRPGGSPEHTRHSGG 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA1 SPEHLQKHALGGSLEHLPRARGTSPEHLKQHYGASPDHKHASGSGG-SGGGSREGTLRRP ::::::::::.::::::::::::::::::::.:.::::::..:.:: :::::::::::: gi|149 SPEHLQKHALSGSLEHLPRARGTSPEHLKQHFGGSPDHKHGGGGGGGSGGGSREGTLRRQ 340 350 360 370 380 390 450 460 470 480 mKIAA1 AQEDSSSHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQ----------------- :::: : :::::::::::::::::::::::::::::::::::: gi|149 AQEDLSPHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQATQNRRQPPTRNSSNME 400 410 420 430 440 450 mKIAA1 ------------------------------------------------------------ gi|149 KGWGPRARRVLQWWQGCRGIGRCLPTLPGSFRLSSGADGSNSSPNSPASFSGHATPSQQP 460 470 480 490 500 510 490 500 510 mKIAA1 --------VVWRKLGDAAGSCPGIRQHLSGNQYKGPM ::::::::::::::::::::::::::::: gi|149 EPVVHSLKVVWRKLGDAAGSCPGIRQHLSGNQYKGPM 520 530 540 >>gi|149044832|gb|EDL98018.1| rCG23305 [Rattus norvegicu (421 aa) initn: 2690 init1: 2690 opt: 2690 Z-score: 2425.0 bits: 458.0 E(): 2.3e-126 Smith-Waterman score: 2690; 95.802% identity (99.259% similar) in 405 aa overlap (57-461:1-405) 30 40 50 60 70 80 mKIAA1 GVGGGHPAAPAPSPVVSPLPPTRTCRCADTMSKAAGGSAPAAESCPSAPAGASTPTGVDD :::::::.:::::::::::::.:::.::.: gi|149 MSKAAGGAAPAAESCPSAPAGVSTPAGVED 10 20 30 90 100 110 120 130 140 mKIAA1 LSKVTDEELLQWSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDIN :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|149 LSKVTDEELLQWSKEDLIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDIN 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 QKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQ 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 EEVVKENMELKELCMLLDEEKGVGCAGSRCSIDSQASLCQLVASATPYVRDVGDGSSTSS ::::::::::::::.:::::::.::::::::::::::::::::::.:::::::::::::: gi|149 EEVVKENMELKELCVLLDEEKGTGCAGSRCSIDSQASLCQLVASAAPYVRDVGDGSSTSS 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA1 TGSTDSPDHHKHHASGGSPEHLQKPRSEGSPEHTKHRSTSPEHLHKPRASGTPDHSKALK :::::::::::::::::::::::::::::::::.::::::::::::::::::::: :::: gi|149 TGSTDSPDHHKHHASGGSPEHLQKPRSEGSPEHNKHRSTSPEHLHKPRASGTPDHPKALK 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 GPSPEHHKPLCKGSPEQQRHPHPGSSPEVLPKHVLSGSPEHFQKHRPGGSPEHTRHSGGS ::::::::::::::::::::::::::::.:::: :::::::::::::::::::.:::::: gi|149 GPSPEHHKPLCKGSPEQQRHPHPGSSPEMLPKHKLSGSPEHFQKHRPGGSPEHARHSGGS 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA1 PEHLQKHALGGSLEHLPRARGTSPEHLKQHYGASPDHKHASGSGGSGGGSREGTLRRPAQ ::::::::::::::::::::::::::::::::.:::::::.:.::::::::::::::::: gi|149 PEHLQKHALGGSLEHLPRARGTSPEHLKQHYGGSPDHKHAGGGGGSGGGSREGTLRRPAQ 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA1 EDSSSHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQVVWRKLGDAAGSCPGIRQH :::: :::::::::: gi|149 EDSSPHHRNVYSGMNGGSVRAGELLWLGNSV 400 410 420 >>gi|122056145|sp|Q96PX6.2|CC85A_HUMAN RecName: Full=Coi (553 aa) initn: 2510 init1: 2309 opt: 2684 Z-score: 2418.1 bits: 457.1 E(): 5.6e-126 Smith-Waterman score: 2717; 77.215% identity (81.555% similar) in 553 aa overlap (57-516:1-553) 30 40 50 60 70 80 mKIAA1 GVGGGHPAAPAPSPVVSPLPPTRTCRCADTMSKAAGGSAPAA---ESCPSAPAGAST--P :::::::.: :: ::: :::::.:. : gi|122 MSKAAGGAAAAAAAAESCSSAPAGSSAAPP 10 20 30 90 100 110 120 130 140 mKIAA1 TGVDDLSKVTDEELLQWSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRG . :.:::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 APVEDLSKVSDEELLQWSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRG 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 LKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|122 LKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKD 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 LEVKQEEVVKENMELKELCMLLDEEKGVGCAGSRCSIDSQASLCQLVASATPYVRDVGDG :::::::::::::::::::.:::::::.::::::::::::::::::.::..::::::::: gi|122 LEVKQEEVVKENMELKELCVLLDEEKGAGCAGSRCSIDSQASLCQLTASTAPYVRDVGDG 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA1 SSTSSTGSTDSPDHHKHHASGGSPEHLQKPRSEGSPEHTKHRSTSPEHLHKPRASGTPDH ::::::::::::::::::::.:::::::::::::::::.::::.:::: .:::: ::::. gi|122 SSTSSTGSTDSPDHHKHHASSGSPEHLQKPRSEGSPEHSKHRSASPEHPQKPRACGTPDR 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 SKALKGPSPEHHKPLCKGSPEQQRHPHPGSSPEVLPKHVLSGSPEHFQKHRPGGSPEHTR ::::::::::::::::::::::::::::::::.::::::::::::::::: :.::::.: gi|122 PKALKGPSPEHHKPLCKGSPEQQRHPHPGSSPETLPKHVLSGSPEHFQKHRSGSSPEHAR 280 290 300 310 320 330 390 400 410 420 430 mKIAA1 HSGGSPEHLQKHALGGSLEHLPRARGTSPEHLKQHYGASPDHKH---ASGSGGSGGGSRE :::::::::::::::::::::::::::::::::::::.:::::: ..::::::::::: gi|122 HSGGSPEHLQKHALGGSLEHLPRARGTSPEHLKQHYGGSPDHKHGGGSGGSGGSGGGSRE 340 350 360 370 380 390 440 450 460 470 480 mKIAA1 GTLRRPAQEDSSSHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQ----------- ::::: ::::.: :::::::::::::::::::::::::::::::::::: gi|122 GTLRRQAQEDGSPHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQASQNRRQPPTR 400 410 420 430 440 450 mKIAA1 ------------------------------------------------------------ gi|122 NSSNMEKGWGSRARRVLQWWQGCRGIGRCLPTLPGSFRLSSGADGSNSSPNSAASFSGHA 460 470 480 490 500 510 490 500 510 mKIAA1 --------------VVWRKLGDAAGSCPGIRQHLSGNQYKGPM ::::::::::::::::::::::::::::: gi|122 TPSQQPEPVVHSLKVVWRKLGDAAGSCPGIRQHLSGNQYKGPM 520 530 540 550 >>gi|119620482|gb|EAX00077.1| hCG1994544, isoform CRA_b (553 aa) initn: 2496 init1: 2295 opt: 2678 Z-score: 2412.7 bits: 456.1 E(): 1.1e-125 Smith-Waterman score: 2711; 77.034% identity (81.374% similar) in 553 aa overlap (57-516:1-553) 30 40 50 60 70 80 mKIAA1 GVGGGHPAAPAPSPVVSPLPPTRTCRCADTMSKAAGGSAPAA---ESCPSAPAGAST--P :::::::.: :: ::: ::::.:. : gi|119 MSKAAGGAAAAAAAAESCSPAPAGSSAAPP 10 20 30 90 100 110 120 130 140 mKIAA1 TGVDDLSKVTDEELLQWSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRG . :.:::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 APVEDLSKVSDEELLQWSKEELIRSLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRG 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA1 LKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|119 LKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKD 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 LEVKQEEVVKENMELKELCMLLDEEKGVGCAGSRCSIDSQASLCQLVASATPYVRDVGDG :::::::::::::::::::.:::::::.::::::::::::::::::.::..::::::::: gi|119 LEVKQEEVVKENMELKELCVLLDEEKGAGCAGSRCSIDSQASLCQLTASTAPYVRDVGDG 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA1 SSTSSTGSTDSPDHHKHHASGGSPEHLQKPRSEGSPEHTKHRSTSPEHLHKPRASGTPDH ::::::::::::::::::::.:::::::::::::::::.::::.:::: .:::: ::::. gi|119 SSTSSTGSTDSPDHHKHHASSGSPEHLQKPRSEGSPEHSKHRSASPEHPQKPRACGTPDR 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA1 SKALKGPSPEHHKPLCKGSPEQQRHPHPGSSPEVLPKHVLSGSPEHFQKHRPGGSPEHTR ::::::::::::::::::::::::::::::::.::::::::::::::::: :.::::.: gi|119 PKALKGPSPEHHKPLCKGSPEQQRHPHPGSSPETLPKHVLSGSPEHFQKHRSGSSPEHAR 280 290 300 310 320 330 390 400 410 420 430 mKIAA1 HSGGSPEHLQKHALGGSLEHLPRARGTSPEHLKQHYGASPDHKH---ASGSGGSGGGSRE :::::::::::::::::::::::::::::::::::::.:::::: ..::::::::::: gi|119 HSGGSPEHLQKHALGGSLEHLPRARGTSPEHLKQHYGGSPDHKHGGGSGGSGGSGGGSRE 340 350 360 370 380 390 440 450 460 470 480 mKIAA1 GTLRRPAQEDSSSHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQ----------- ::::: ::::.: :::::::::::::::::::::::::::::::::::: gi|119 GTLRRQAQEDGSPHHRNVYSGMNESTLSYVRQLEARVRQLEEENRMLPQASQNRRQPPTR 400 410 420 430 440 450 mKIAA1 ------------------------------------------------------------ gi|119 NSSNMEKGWGSRARRVLQWWQGCRGIGRCLPTLPGSFRLSSGADGSNSSPNSAASFSGHA 460 470 480 490 500 510 490 500 510 mKIAA1 --------------VVWRKLGDAAGSCPGIRQHLSGNQYKGPM ::::::::::::::::::::::::::::: gi|119 TPSQQPEPVVHSLKVVWRKLGDAAGSCPGIRQHLSGNQYKGPM 520 530 540 550 516 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 09:29:56 2009 done: Mon Mar 16 09:37:03 2009 Total Scan time: 954.910 Total Display time: 0.140 Function used was FASTA [version 34.26.5 April 26, 2007]