# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj12230.fasta.nr -Q ../query/mKIAA0976.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0976, 470 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7914408 sequences Expectation_n fit: rho(ln(x))= 4.7570+/-0.000186; mu= 12.9420+/- 0.010 mean_var=71.0716+/-13.695, 0's: 36 Z-trim: 62 B-trim: 217 in 2/64 Lambda= 0.152134 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|9909144|dbj|BAB12008.1| Netrin-G1c [Mus musculu ( 438) 3101 689.9 3.4e-196 gi|19073365|gb|AAL84780.1|AF475071_1 laminet-1C [M ( 438) 3097 689.0 6.2e-196 gi|149025740|gb|EDL81983.1| similar to netrin G1 ( ( 438) 3029 674.1 1.9e-191 gi|22539630|gb|AAH30220.1| Netrin G1 [Homo sapiens ( 438) 2987 664.9 1.2e-188 gi|37181855|gb|AAQ88731.1| YLSR571 [Homo sapiens] ( 438) 2966 660.3 2.8e-187 gi|194211060|ref|XP_001492694.2| PREDICTED: netrin ( 438) 2955 657.9 1.5e-186 gi|50750908|ref|XP_422179.1| PREDICTED: similar to ( 437) 2669 595.1 1.2e-167 gi|19073363|gb|AAL84779.1|AF475070_1 laminet-1B [M ( 483) 2595 578.9 9.8e-163 gi|148670052|gb|EDL01999.1| netrin G1, isoform CRA ( 438) 2582 576.0 6.6e-162 gi|57015411|sp|Q8R4G0.2|NTNG1_MOUSE RecName: Full= ( 539) 2582 576.1 7.7e-162 gi|19073375|gb|AAL84785.1|AF475076_1 laminet-1H [M ( 438) 2578 575.1 1.2e-161 gi|19073373|gb|AAL84784.1|AF475075_1 laminet-1G [M ( 494) 2578 575.2 1.3e-161 gi|19073361|gb|AAL84778.1|AF475069_1 laminet-1A [M ( 539) 2578 575.2 1.4e-161 gi|9909140|dbj|BAB12006.1| Netrin-G1e [Mus musculu ( 460) 2569 573.2 4.9e-161 gi|19073369|gb|AAL84782.1|AF475073_1 laminet-1E [M ( 460) 2565 572.3 9.1e-161 gi|9909142|dbj|BAB12007.1| Netrin-G1d [Mus musculu ( 480) 2560 571.2 2e-160 gi|19073371|gb|AAL84783.1|AF475074_1 laminet-1F [M ( 364) 2557 570.4 2.6e-160 gi|19073377|gb|AAL84786.1|AF475077_1 laminet-1I [M ( 388) 2556 570.2 3.2e-160 gi|19073367|gb|AAL84781.1|AF475072_1 laminet-1D [M ( 480) 2556 570.3 3.7e-160 gi|149025739|gb|EDL81982.1| similar to netrin G1 ( ( 483) 2552 569.5 6.8e-160 gi|149025741|gb|EDL81984.1| similar to netrin G1 ( ( 438) 2539 566.6 4.6e-159 gi|149025738|gb|EDL81981.1| similar to netrin G1 ( ( 539) 2539 566.6 5.3e-159 gi|114558107|ref|XP_001143401.1| PREDICTED: simila ( 483) 2531 564.8 1.7e-158 gi|149025737|gb|EDL81980.1| similar to netrin G1 ( ( 460) 2527 563.9 2.9e-158 gi|55664954|emb|CAH73831.1| netrin G1 [Homo sapien ( 494) 2518 562.0 1.2e-157 gi|57015420|sp|Q9Y2I2.3|NTNG1_HUMAN RecName: Full= ( 539) 2518 562.0 1.3e-157 gi|149025736|gb|EDL81979.1| similar to netrin G1 ( ( 480) 2517 561.8 1.4e-157 gi|194383212|dbj|BAG59162.1| unnamed protein produ ( 505) 2513 560.9 2.7e-157 gi|194036582|ref|XP_001928611.1| PREDICTED: netrin ( 536) 2501 558.3 1.7e-156 gi|55664956|emb|CAH73833.1| netrin G1 [Homo sapien ( 460) 2500 558.0 1.8e-156 gi|55664951|emb|CAH73828.1| netrin G1 [Homo sapien ( 364) 2493 556.4 4.4e-156 gi|31874278|emb|CAD98143.1| hypothetical protein [ ( 365) 2493 556.4 4.4e-156 gi|55664952|emb|CAH73829.1| netrin G1 [Homo sapien ( 480) 2491 556.1 7.3e-156 gi|114558099|ref|XP_001143543.1| PREDICTED: netrin ( 525) 2491 556.1 7.7e-156 gi|114558097|ref|XP_001143685.1| PREDICTED: netrin ( 581) 2491 556.1 8.3e-156 gi|194036584|ref|XP_001928603.1| PREDICTED: netrin ( 477) 2474 552.3 9.6e-155 gi|119224042|gb|AAI26500.1| Hypothetical protein L ( 461) 2473 552.1 1.1e-154 gi|109012598|ref|XP_001082588.1| PREDICTED: netrin ( 538) 2463 550.0 5.6e-154 gi|126310891|ref|XP_001372330.1| PREDICTED: simila ( 537) 2460 549.3 8.8e-154 gi|73959969|ref|XP_547253.2| PREDICTED: similar to ( 850) 2447 546.6 8.9e-153 gi|194387322|dbj|BAG60025.1| unnamed protein produ ( 363) 2437 544.1 2.2e-152 gi|149639032|ref|XP_001507215.1| PREDICTED: simila ( 538) 2401 536.4 7e-150 gi|118093980|ref|XP_001231473.1| PREDICTED: simila ( 539) 2354 526.0 8.9e-147 gi|224057120|ref|XP_002193807.1| PREDICTED: netrin ( 538) 2351 525.4 1.4e-146 gi|125805586|ref|XP_687938.2| PREDICTED: similar t ( 447) 2114 473.3 5.6e-131 gi|19073379|gb|AAL84787.1|AF475078_1 laminet-1J [M ( 296) 2052 459.5 5.2e-127 gi|118093983|ref|XP_001231447.1| PREDICTED: simila ( 478) 2045 458.2 2.1e-126 gi|47223064|emb|CAG07151.1| unnamed protein produc ( 446) 2024 453.5 4.9e-125 gi|114558117|ref|XP_513605.2| PREDICTED: netrin G1 ( 506) 1941 435.4 1.6e-119 gi|169154702|emb|CAQ15411.1| novel protein similar ( 355) 1857 416.8 4.5e-114 >>gi|9909144|dbj|BAB12008.1| Netrin-G1c [Mus musculus] (438 aa) initn: 3101 init1: 3101 opt: 3101 Z-score: 3678.7 bits: 689.9 E(): 3.4e-196 Smith-Waterman score: 3101; 100.000% identity (100.000% similar) in 438 aa overlap (33-470:1-438) 10 20 30 40 50 60 mKIAA0 AHTHTHIRYSCIFKRDTDCIEDTKIAKILEMYLSRFLSIHALWVTVSSVMQPYLFVWGHY :::::::::::::::::::::::::::::: gi|990 MYLSRFLSIHALWVTVSSVMQPYLFVWGHY 10 20 30 70 80 90 100 110 120 mKIAA0 DVCKSLIYTEEGKVWDYTACQPESTDMTKYLKVKLDPPDITCGDPPESFCAMGNPYMCNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|990 DVCKSLIYTEEGKVWDYTACQPESTDMTKYLKVKLDPPDITCGDPPESFCAMGNPYMCNN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|990 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|990 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 STGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|990 STGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|990 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCK 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGTNVCDNELLHCQNGGTCQNNVRCACPDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|990 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGTNVCDNELLHCQNGGTCQNNVRCACPDA 340 350 360 370 380 390 430 440 450 460 470 mKIAA0 YTGILCEKLRCEEAGSCGSESGQGAPPRGSPALLLLTMLLGTAGPLVF :::::::::::::::::::::::::::::::::::::::::::::::: gi|990 YTGILCEKLRCEEAGSCGSESGQGAPPRGSPALLLLTMLLGTAGPLVF 400 410 420 430 >>gi|19073365|gb|AAL84780.1|AF475071_1 laminet-1C [Mus m (438 aa) initn: 3097 init1: 3097 opt: 3097 Z-score: 3673.9 bits: 689.0 E(): 6.2e-196 Smith-Waterman score: 3097; 99.772% identity (100.000% similar) in 438 aa overlap (33-470:1-438) 10 20 30 40 50 60 mKIAA0 AHTHTHIRYSCIFKRDTDCIEDTKIAKILEMYLSRFLSIHALWVTVSSVMQPYLFVWGHY :::::::::::::::::::::::::::::: gi|190 MYLSRFLSIHALWVTVSSVMQPYLFVWGHY 10 20 30 70 80 90 100 110 120 mKIAA0 DVCKSLIYTEEGKVWDYTACQPESTDMTKYLKVKLDPPDITCGDPPESFCAMGNPYMCNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 DVCKSLIYTEEGKVWDYTACQPESTDMTKYLKVKLDPPDITCGDPPESFCAMGNPYMCNN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|190 TFESGRPDQMILEKSFDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 STGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 STGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCK 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGTNVCDNELLHCQNGGTCQNNVRCACPDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGTNVCDNELLHCQNGGTCQNNVRCACPDA 340 350 360 370 380 390 430 440 450 460 470 mKIAA0 YTGILCEKLRCEEAGSCGSESGQGAPPRGSPALLLLTMLLGTAGPLVF :::::::::::::::::::::::::::::::::::::::::::::::: gi|190 YTGILCEKLRCEEAGSCGSESGQGAPPRGSPALLLLTMLLGTAGPLVF 400 410 420 430 >>gi|149025740|gb|EDL81983.1| similar to netrin G1 (pred (438 aa) initn: 3029 init1: 3029 opt: 3029 Z-score: 3593.3 bits: 674.1 E(): 1.9e-191 Smith-Waterman score: 3029; 97.260% identity (99.087% similar) in 438 aa overlap (33-470:1-438) 10 20 30 40 50 60 mKIAA0 AHTHTHIRYSCIFKRDTDCIEDTKIAKILEMYLSRFLSIHALWVTVSSVMQPYLFVWGHY ::::::::::::::::::::::: .::::: gi|149 MYLSRFLSIHALWVTVSSVMQPYPLVWGHY 10 20 30 70 80 90 100 110 120 mKIAA0 DVCKSLIYTEEGKVWDYTACQPESTDMTKYLKVKLDPPDITCGDPPESFCAMGNPYMCNN ::::. ::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|149 DVCKTQIYTEEGKVWDYMACQPESTDMTKYLKVKLDPPDITCGDPPESFCAMGNPYMCNN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 STGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 STGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCK :::::::::::::::::::::::::::::::::: :.::::::::::::::::::::::: gi|149 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATMCVYDNSKLTCECEHNTTGPDCGKCK 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGTNVCDNELLHCQNGGTCQNNVRCACPDA :::::::::::::::::::::::::::::::::::::::::::::::::.:::::.:::: gi|149 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGTNVCDNELLHCQNGGTCHNNVRCVCPDA 340 350 360 370 380 390 430 440 450 460 470 mKIAA0 YTGILCEKLRCEEAGSCGSESGQGAPPRGSPALLLLTMLLGTAGPLVF :::::::::::::::::::.:::::::::::::::::.:::::.:::: gi|149 YTGILCEKLRCEEAGSCGSDSGQGAPPRGSPALLLLTVLLGTASPLVF 400 410 420 430 >>gi|22539630|gb|AAH30220.1| Netrin G1 [Homo sapiens] (438 aa) initn: 2987 init1: 2987 opt: 2987 Z-score: 3543.5 bits: 664.9 E(): 1.2e-188 Smith-Waterman score: 2987; 95.890% identity (98.174% similar) in 438 aa overlap (33-470:1-438) 10 20 30 40 50 60 mKIAA0 AHTHTHIRYSCIFKRDTDCIEDTKIAKILEMYLSRFLSIHALWVTVSSVMQPYLFVWGHY ::::::::::::::::::::::: .::::: gi|225 MYLSRFLSIHALWVTVSSVMQPYPLVWGHY 10 20 30 70 80 90 100 110 120 mKIAA0 DVCKSLIYTEEGKVWDYTACQPESTDMTKYLKVKLDPPDITCGDPPESFCAMGNPYMCNN :.::. ::::::::::: :::::::::::::::::::::::::::::.:::::::::::: gi|225 DLCKTQIYTEEGKVWDYMACQPESTDMTKYLKVKLDPPDITCGDPPETFCAMGNPYMCNN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|225 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|225 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLDAFHMDPKSVKDLSQHTVLEIICTEEY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 STGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|225 STGYTTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCK :::::::::::::::::::::::::::::::::: :.::::::::::::::::::::::: gi|225 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCK 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGTNVCDNELLHCQNGGTCQNNVRCACPDA :::::::::::::::::::::::::::::::::::::::::::::::::.::::: :: : gi|225 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGTNVCDNELLHCQNGGTCHNNVRCLCPAA 340 350 360 370 380 390 430 440 450 460 470 mKIAA0 YTGILCEKLRCEEAGSCGSESGQGAPPRGSPALLLLTMLLGTAGPLVF :::::::::::::::::::.:::::::.::::::::: :::::.:::: gi|225 YTGILCEKLRCEEAGSCGSDSGQGAPPHGSPALLLLTTLLGTASPLVF 400 410 420 430 >>gi|37181855|gb|AAQ88731.1| YLSR571 [Homo sapiens] (438 aa) initn: 2966 init1: 2966 opt: 2966 Z-score: 3518.5 bits: 660.3 E(): 2.8e-187 Smith-Waterman score: 2966; 95.205% identity (97.945% similar) in 438 aa overlap (33-470:1-438) 10 20 30 40 50 60 mKIAA0 AHTHTHIRYSCIFKRDTDCIEDTKIAKILEMYLSRFLSIHALWVTVSSVMQPYLFVWGHY ::::: ::::::::::::::::: .::::: gi|371 MYLSRSLSIHALWVTVSSVMQPYPLVWGHY 10 20 30 70 80 90 100 110 120 mKIAA0 DVCKSLIYTEEGKVWDYTACQPESTDMTKYLKVKLDPPDITCGDPPESFCAMGNPYMCNN :.::. ::::::::::: :::::::::::::::::::::::::::::.:::::::::::: gi|371 DLCKTQIYTEEGKVWDYMACQPESTDMTKYLKVKLDPPDITCGDPPETFCAMGNPYMCNN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|371 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|371 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLDAFHMDPKSVKDLSQHTVLEIICTEEY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 STGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA ::::.:::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|371 STGYTTNSKIIHFEIKDRFALFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCK :::::::::::::::::::::::::::::::::: :.::::::::::::::::::::::: gi|371 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCK 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGTNVCDNELLHCQNGGTCQNNVRCACPDA :::::::::::::::::::::::::::::::::::::::::::::::::.::::: :: : gi|371 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGTNVCDNELLHCQNGGTCHNNVRCLCPAA 340 350 360 370 380 390 430 440 450 460 470 mKIAA0 YTGILCEKLRCEEAGSCGSESGQGAPPRGSPALLLLTMLLGTAGPLVF :::::::::::::::::::.:::::::.:.::::::: :::::.:::: gi|371 YTGILCEKLRCEEAGSCGSDSGQGAPPHGTPALLLLTTLLGTASPLVF 400 410 420 430 >>gi|194211060|ref|XP_001492694.2| PREDICTED: netrin G1 (438 aa) initn: 2955 init1: 2955 opt: 2955 Z-score: 3505.5 bits: 657.9 E(): 1.5e-186 Smith-Waterman score: 2955; 95.434% identity (97.260% similar) in 438 aa overlap (33-470:1-438) 10 20 30 40 50 60 mKIAA0 AHTHTHIRYSCIFKRDTDCIEDTKIAKILEMYLSRFLSIHALWVTVSSVMQPYLFVWGHY ::::::::::::::::::::::: .::::: gi|194 MYLSRFLSIHALWVTVSSVMQPYPLVWGHY 10 20 30 70 80 90 100 110 120 mKIAA0 DVCKSLIYTEEGKVWDYTACQPESTDMTKYLKVKLDPPDITCGDPPESFCAMGNPYMCNN ::::. ::::::::::: :::::::::::::::::::::::::::::.:::::::::::: gi|194 DVCKTQIYTEEGKVWDYMACQPESTDMTKYLKVKLDPPDITCGDPPETFCAMGNPYMCNN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|194 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLDAFHMDPKSVKDLSQHTVLEIICTEEY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 STGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA :::: :::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|194 STGYMTNSKIIHFEIKDRFAFFAGPWLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCK :::::::::::::::::::::::.:::::::::: :.::::::::::::::::::::::: gi|194 VGEIFVDELHLARYFYAISDIKVHGRCKCNLHATVCVYDNSKLTCECEHNTTGPDCGKCK 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGTNVCDNELLHCQNGGTCQNNVRCACPDA :::::::::::::::::::::::::::::::::::::::::::::::::.::::: :: : gi|194 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGTNVCDNELLHCQNGGTCHNNVRCLCPAA 340 350 360 370 380 390 430 440 450 460 470 mKIAA0 YTGILCEKLRCEEAGSCGSESGQGAPPRGSPALLLLTMLLGTAGPLVF :::::::::::::::::::.::::: :: :::::::: :::::.:::: gi|194 YTGILCEKLRCEEAGSCGSDSGQGAAPRCSPALLLLTALLGTASPLVF 400 410 420 430 >>gi|50750908|ref|XP_422179.1| PREDICTED: similar to net (437 aa) initn: 2656 init1: 2630 opt: 2669 Z-score: 3166.3 bits: 595.1 E(): 1.2e-167 Smith-Waterman score: 2669; 86.437% identity (93.103% similar) in 435 aa overlap (33-466:1-433) 10 20 30 40 50 60 mKIAA0 AHTHTHIRYSCIFKRDTDCIEDTKIAKILEMYLSRFLSIHALWVTVSSVMQPYLFVWGHY ::::::::.:::::::::.:: : ::::: gi|507 MYLSRFLSLHALWVTVSSMMQHYPSVWGHY 10 20 30 70 80 90 100 110 120 mKIAA0 DVCKSLIYTEEGKVWDYTACQPESTDMTKYLKVKLDPPDITCGDPPESFCAMGNPYMCNN ::::. ::::::::::: :::::. :: ::..: :::::::::::::.:::::::::::: gi|507 DVCKTQIYTEEGKVWDYMACQPEARDMIKYVRVTLDPPDITCGDPPETFCAMGNPYMCNN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI :::::: :::::::::::.:::::::::::.:::.:::::.:::::::.::::::::::: gi|507 ECDASTQELAHPPELMFDLEGRHPSTFWQSTTWKDYPKPLHVNITLSWNKTIELTDNIVI 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|507 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLDAFHMDPKSVKDLSQHTVLEIICTEEY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 STGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA :::: ::::::::::::::::::::::.::::::::::::::::::::.::::::::::: gi|507 STGYMTNSKIIHFEIKDRFAFFAGPRLHNMASLYGQLDTTKKLRDFFTITDLRIRLLRPA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCK .:::.::: ::::::::::::.: ::::::::::.: .:..: :::::::::::::::: gi|507 TGEIYVDEQHLARYFYAISDIRVYGRCKCNLHATGCKEENKRLLCECEHNTTGPDCGKCK 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGTNVCDNELLHCQNGGTCQNNVRCACPDA :::::::::::::::::::::: :::::::::::::::::::::::::: ::::: :: : gi|507 KNYQGRPWSPGSYLPIPKGTANICIPSISSIGTNVCDNELLHCQNGGTCINNVRCQCPPA 340 350 360 370 380 390 430 440 450 460 470 mKIAA0 YTGILCEKLRCE-EAGSCGSESGQGAPPRGSPALLLLTMLLGTAGPLVF :::::::::.:: . :.:.. :.::: . : :::: :::.:: gi|507 YTGILCEKLKCERDPGGCSQSSAQGAMSH-CP-LLLLMALLGAAGVHMC 400 410 420 430 >>gi|19073363|gb|AAL84779.1|AF475070_1 laminet-1B [Mus m (483 aa) initn: 3093 init1: 2566 opt: 2595 Z-score: 3077.9 bits: 578.9 E(): 9.8e-163 Smith-Waterman score: 2995; 90.476% identity (90.476% similar) in 483 aa overlap (33-470:1-483) 10 20 30 40 50 60 mKIAA0 AHTHTHIRYSCIFKRDTDCIEDTKIAKILEMYLSRFLSIHALWVTVSSVMQPYLFVWGHY :::::::::::::::::::::::::::::: gi|190 MYLSRFLSIHALWVTVSSVMQPYLFVWGHY 10 20 30 70 80 90 100 110 120 mKIAA0 DVCKSLIYTEEGKVWDYTACQPESTDMTKYLKVKLDPPDITCGDPPESFCAMGNPYMCNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 DVCKSLIYTEEGKVWDYTACQPESTDMTKYLKVKLDPPDITCGDPPESFCAMGNPYMCNN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 STGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 STGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCK 280 290 300 310 320 330 370 380 390 mKIAA0 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGT--------------------------- :::::::::::::::::::::::::::::::: gi|190 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGKCYCNPLGSIHDRCNGSGFCECKTGTTG 340 350 360 370 380 390 400 410 420 430 mKIAA0 ------------------NVCDNELLHCQNGGTCQNNVRCACPDAYTGILCEKLRCEEAG :::::::::::::::::::::::::::::::::::::::::: gi|190 PKCDECLPGNSWYYGCQPNVCDNELLHCQNGGTCQNNVRCACPDAYTGILCEKLRCEEAG 400 410 420 430 440 450 440 450 460 470 mKIAA0 SCGSESGQGAPPRGSPALLLLTMLLGTAGPLVF ::::::::::::::::::::::::::::::::: gi|190 SCGSESGQGAPPRGSPALLLLTMLLGTAGPLVF 460 470 480 >>gi|148670052|gb|EDL01999.1| netrin G1, isoform CRA_c [ (438 aa) initn: 2579 init1: 2579 opt: 2582 Z-score: 3063.1 bits: 576.0 E(): 6.6e-162 Smith-Waterman score: 2582; 92.768% identity (94.514% similar) in 401 aa overlap (33-432:1-400) 10 20 30 40 50 60 mKIAA0 AHTHTHIRYSCIFKRDTDCIEDTKIAKILEMYLSRFLSIHALWVTVSSVMQPYLFVWGHY :::::::::::::::::::::::::::::: gi|148 MYLSRFLSIHALWVTVSSVMQPYLFVWGHY 10 20 30 70 80 90 100 110 120 mKIAA0 DVCKSLIYTEEGKVWDYTACQPESTDMTKYLKVKLDPPDITCGDPPESFCAMGNPYMCNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DVCKSLIYTEEGKVWDYTACQPESTDMTKYLKVKLDPPDITCGDPPESFCAMGNPYMCNN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 STGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 STGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCK 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGTNVCDNELLHCQNGGTCQNNVRC-ACPD ::::::::::::::::::::::::::::::::. : .. .:. :.: : .: gi|148 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGNCECFGHSNRCSYIDLL-NTVICVSCKH 340 350 360 370 380 430 440 450 460 470 mKIAA0 AYTGILCEKLRCEEAGSCGSESGQGAPPRGSPALLLLTMLLGTAGPLVF : :: : gi|148 NTRGQHCELCRLGYFRNASAQLDDENVCIGQFHYDFSFCSVPLELWGAG 390 400 410 420 430 >>gi|57015411|sp|Q8R4G0.2|NTNG1_MOUSE RecName: Full=Netr (539 aa) initn: 2579 init1: 2579 opt: 2582 Z-score: 3061.9 bits: 576.1 E(): 7.7e-162 Smith-Waterman score: 2884; 81.076% identity (81.262% similar) in 539 aa overlap (33-470:1-539) 10 20 30 40 50 60 mKIAA0 AHTHTHIRYSCIFKRDTDCIEDTKIAKILEMYLSRFLSIHALWVTVSSVMQPYLFVWGHY :::::::::::::::::::::::::::::: gi|570 MYLSRFLSIHALWVTVSSVMQPYLFVWGHY 10 20 30 70 80 90 100 110 120 mKIAA0 DVCKSLIYTEEGKVWDYTACQPESTDMTKYLKVKLDPPDITCGDPPESFCAMGNPYMCNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 DVCKSLIYTEEGKVWDYTACQPESTDMTKYLKVKLDPPDITCGDPPESFCAMGNPYMCNN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 ECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNITLSWSKTIELTDNIVI 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 TFESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 STGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 STGYSTNSKIIHFEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPA 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 VGEIFVDELHLARYFYAISDIKVRGRCKCNLHATSCLYDNSKLTCECEHNTTGPDCGKCK 280 290 300 310 320 330 370 380 390 mKIAA0 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGT--------------------------- ::::::::::::::::::::::::::::::::. gi|570 KNYQGRPWSPGSYLPIPKGTANTCIPSISSIGNCECFGHSNRCSYIDLLNTVICVSCKHN 340 350 360 370 380 390 mKIAA0 ------------------------------------------------------------ gi|570 TRGQHCELCRLGYFRNASAQLDDENVCIECYCNPLGSIHDRCNGSGFCECKTGTTGPKCD 400 410 420 430 440 450 400 410 420 430 440 mKIAA0 --------------NVCDNELLHCQNGGTCQNNVRCACPDAYTGILCEKLRCEEAGSCGS :::::::::::::::::::::::::::::::::::::::::::::: gi|570 ECLPGNSWYYGCQPNVCDNELLHCQNGGTCQNNVRCACPDAYTGILCEKLRCEEAGSCGS 460 470 480 490 500 510 450 460 470 mKIAA0 ESGQGAPPRGSPALLLLTMLLGTAGPLVF ::::::::::::::::::::::::::::: gi|570 ESGQGAPPRGSPALLLLTMLLGTAGPLVF 520 530 470 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 08:56:00 2009 done: Tue Mar 17 09:02:43 2009 Total Scan time: 910.330 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]