Comparison of KIAA cDNA sequences between mouse and human (KIAA1598)
<<Original sequence data>>
mouse mKIAA1598 (mfj12143) length: 3971 bp, CDS: 423 - 2483
human KIAA1598 (fj09914) length: 3099 bp, CDS: 1 - 1341
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: - - - -
CDS: 618 - 2272 1171 171 12.7
3'UTR: 2273 - 4036 1184 397 25.1
amino acid
CDS: 618 - 2272 420 27 6.0
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mfj12143 1 CTCAAGACTGCGGTGACTCAATTAGCCAGACAGACTGCAAACATGCACTT 50
fj09914 1 .................................................. 1
51 ----+----*----+----*----+----*----+----*----+----* 100
mfj12143 51 GCTTGGTGGACAGGTGCATGGTGTAGAACAGAGGGTTTTCCAGCCCTGGC 100
fj09914 1 .................................................. 1
101 ----+----*----+----*----+----*----+----*----+----* 150
mfj12143 101 TCCAATGAGCAGTGACTGAGAACTAGGATAGGAGCCTGGTCCTCTGGGGT 150
fj09914 1 .................................................. 1
151 ----+----*----+----*----+----*----+----*----+----* 200
mfj12143 151 CCGTCCGGTCCTGCTCAGATCCGCTGTCCAGCTCTAGGGTGGCGGACCTG 200
fj09914 1 .................................................. 1
201 ----+----*----+----*----+----*----+----*----+----* 250
mfj12143 201 GGGAACCCGGGTCGAGTCTCCATGGTGCGCGCCTCGGGTGGAAAGCCTGG 250
fj09914 1 .................................................. 1
251 ----+----*----+----*----+----*----+----*----+----* 300
mfj12143 251 CGCAGCGGCGGCCTTAGCAGAACCGCATACAGCCACCTGGGAGGATCGCA 300
fj09914 1 .................................................. 1
301 ----+----*----+----*----+----*----+----*----+----* 350
mfj12143 301 GGCGCCCCAGGGCCGTGACACTTCACCCGCCTCCAGCGGCCCACGCCCCT 350
fj09914 1 .................................................. 1
351 ----+----*----+----*----+----*----+----*----+----* 400
mfj12143 351 ACCGGGCCAGGCGCCCAGACCCGCCCGCCGCAGGTGGGGCAGCCAGGGCC 400
fj09914 1 .................................................. 1
401 ----+----*----+----*----+----*----+----*----+----* 450
mfj12143 401 CGCGAGTAGGTGCGTGGGATGATCTCACCGCGTGCGGCGCGCCAGGAGGA 450
fj09914 1 .................................................. 1
451 ----+----*----+----*----+----*----+----*----+----* 500
mfj12143 451 GGAGGAGCGGGAGCGATCCCAACTTCCGGGTAGTGCAGCCGCACGCCGCG 500
fj09914 1 .................................................. 1
501 ----+----*----+----*----+----*----+----*----+----* 550
mfj12143 501 CCACCGGCATCTTGCTTTCTGCTCCCCCTCCCCGTGTCCCCCTCGCCTCT 550
fj09914 1 .................................................. 1
551 ----+----*----+----*----+----*----+----*----+----* 600
mfj12143 551 CCCTCCTTGCCTTTTATCCCCAGCCCCACCCGCCAAAATGAACAGCTCGG 600
fj09914 1 .................................................. 1
601 ----+----*----+----*----+----*----+----*----+----* 650
Q L I T S L K E Q A I
mfj12143 601 ACGAGGAGAAGCAGCTGCAGCTCATCACCAGCTTGAAGGAGCAAGCCATT 650
|||||||| ||||| ||||||||||||| ||
fj09914 1 .................CAGCTCATTACCAGTCTGAAGGAGCAAGCAATA 33
Q L I T S L K E Q A I
651 ----+----*----+----*----+----*----+----*----+----* 700
G E Y E D L R A E N Q K T K E K C
mfj12143 651 GGCGAATATGAAGACCTTCGAGCAGAGAACCAGAAAACAAAGGAGAAGTG 700
|||||||||||||||||| |||||||||||||||||||||||||||||||
fj09914 34 GGCGAATATGAAGACCTTAGAGCAGAGAACCAGAAAACAAAGGAGAAGTG 83
G E Y E D L R A E N Q K T K E K C
701 ----+----*----+----*----+----*----+----*----+----* 750
D K I R Q E R D E A V K K L E E F
mfj12143 701 TGACAAAATTAGGCAAGAACGAGATGAAGCTGTTAAAAAACTGGAAGAGT 750
|||||||||||||||||||||||||||||| ||||||||||||||||| |
fj09914 84 TGACAAAATTAGGCAAGAACGAGATGAAGCCGTTAAAAAACTGGAAGAAT 133
D K I R Q E R D E A V K K L E E F
751 ----+----*----+----*----+----*----+----*----+----* 800
Q K I S H M V I E E V N F M Q N
mfj12143 751 TTCAGAAAATTTCACATATGGTTATAGAGGAGGTGAATTTCATGCAGAAC 800
||||||||||||| || ||||| |||||||| || |||||||||||||||
fj09914 134 TTCAGAAAATTTCTCACATGGTCATAGAGGAAGTTAATTTCATGCAGAAC 183
Q K I S H M V I E E V N F M Q N
801 ----+----*----+----*----+----*----+----*----+----* 850
H L E I E K T C R E S A E A L A T
mfj12143 801 CATCTTGAAATAGAGAAGACATGTCGAGAGAGCGCTGAAGCCTTGGCGAC 850
|||||||||||||||||||| |||||||| || |||||||| ||||| ||
fj09914 184 CATCTTGAAATAGAGAAGACTTGTCGAGAAAGTGCTGAAGCTTTGGCAAC 233
H L E I E K T C R E S A E A L A T
851 ----+----*----+----*----+----*----+----*----+----* 900
K L N K E N K T L K R I S M L Y M
mfj12143 851 AAAGCTAAATAAAGAAAATAAAACACTGAAAAGAATCAGCATGCTATACA 900
|||||||||||||||||||||||| ||||||||||||||||| | ||||
fj09914 234 AAAGCTAAATAAAGAAAATAAAACGTTGAAAAGAATCAGCATGTTGTACA 283
K L N K E N K T L K R I S M L Y M
901 ----+----*----+----*----+----*----+----*----+----* 950
A K L G P D V I T E E I N I D D
mfj12143 901 TGGCCAAACTGGGGCCAGACGTAATTACAGAGGAGATAAACATTGATGAT 950
||||||| ||||| ||||| ||||| || || ||||||||||||||||||
fj09914 284 TGGCCAAGCTGGGACCAGATGTAATAACTGAAGAGATAAACATTGATGAT 333
A K L G P D V I T E E I N I D D
951 ----+----*----+----*----+----*----+----*----+----* 1000
D D P A T D T D A A A E T C V S V
mfj12143 951 GATGACCCAGCCACCGACACAGATGCTGCGGCTGAGACCTGTGTGTCTGT 1000
|| || | | || |||||||| | ||| || ||||| ||||| || ||
fj09914 334 GAAGATTCGACTACAGACACAGACGGTGCCGCCGAGACTTGTGTCTCAGT 383
E D S T T D T D G A A E T C V S V
1001 ----+----*----+----*----+----*----+----*----+----* 1050
Q C Q K Q I K E L R D Q I V S V Q
mfj12143 1001 TCAGTGTCAGAAGCAAATCAAAGAACTTCGAGATCAAATTGTGTCTGTTC 1050
||||||||||||||||| ||||||||||||||||||||||| |||||||
fj09914 384 ACAGTGTCAGAAGCAAATTAAAGAACTTCGAGATCAAATTGTATCTGTTC 433
Q C Q K Q I K E L R D Q I V S V Q
1051 ----+----*----+----*----+----*----+----*----+----* 1100
E E K K V L A I E L E N L K S K
mfj12143 1051 AGGAAGAAAAGAAGGTGTTAGCCATCGAGCTGGAAAACCTCAAGAGCAAA 1100
|||| ||||||||| | |||||||| ||||||||||| ||||||||||||
fj09914 434 AGGAGGAAAAGAAGATTTTAGCCATTGAGCTGGAAAATCTCAAGAGCAAA 483
E E K K I L A I E L E N L K S K
1101 ----+----*----+----*----+----*----+----*----+----* 1150
L G E V M E E V N K V K Q E K A V
mfj12143 1101 CTCGGGGAGGTGATGGAGGAGGTAAATAAAGTTAAGCAAGAAAAAGCTGT 1150
|||| || || || || || |||||||||||||| |||||||| ||||
fj09914 484 CTCGTAGAAGTAATTGAAGAAGTAAATAAAGTTAAACAAGAAAAGACTGT 533
L V E V I E E V N K V K Q E K T V
1151 ----+----*----+----*----+----*----+----*----+----* 1200
L N S E V L E Q R K V L E K C N R
mfj12143 1151 TTTAAATTCAGAAGTCCTTGAGCAGAGGAAAGTCTTAGAAAAATGCAACA 1200
||||||||||||||| ||||| ||||| |||||||||||||||||||| |
fj09914 534 TTTAAATTCAGAAGTTCTTGAACAGAGAAAAGTCTTAGAAAAATGCAATA 583
L N S E V L E Q R K V L E K C N R
1201 ----+----*----+----*----+----*----+----*----+----* 1250
V S M L A V E E Y E E L Q V N L
mfj12143 1201 GAGTGTCCATGTTGGCTGTTGAAGAGTATGAGGAACTGCAAGTGAACCTG 1250
||||||||||||| ||||| |||||||||||||| ||||||| ||||||
fj09914 584 GAGTGTCCATGTTAGCTGTAGAAGAGTATGAGGAGATGCAAGTAAACCTG 633
V S M L A V E E Y E E M Q V N L
1251 ----+----*----+----*----+----*----+----*----+----* 1300
E L E K D L R K K A E S F A Q E M
mfj12143 1251 GAACTGGAGAAGGACCTTCGCAAGAAAGCAGAGTCTTTTGCACAAGAGAT 1300
|| ||||||||||||||||| |||||||||||||| ||||||||||||||
fj09914 634 GAGCTGGAGAAGGACCTTCGAAAGAAAGCAGAGTCATTTGCACAAGAGAT 683
E L E K D L R K K A E S F A Q E M
1301 ----+----*----+----*----+----*----+----*----+----* 1350
F I E Q N K L K R Q S H L L L Q S
mfj12143 1301 GTTCATTGAACAAAACAAACTGAAGAGACAAAGCCACCTTCTGCTGCAGA 1350
||||||||| |||||||| || ||||||||||||||||||||||||||||
fj09914 684 GTTCATTGAGCAAAACAAGCTAAAGAGACAAAGCCACCTTCTGCTGCAGA 733
F I E Q N K L K R Q S H L L L Q S
1351 ----+----*----+----*----+----*----+----*----+----* 1400
S L P D Q Q L L K A L D E N A K
mfj12143 1351 GCTCCCTTCCTGACCAGCAGCTTTTGAAAGCTTTAGACGAAAACGCAAAA 1400
||||| | ||||| ||||||||||||||||||||||||||||| ||||||
fj09914 734 GCTCCATCCCTGATCAGCAGCTTTTGAAAGCTTTAGACGAAAATGCAAAA 783
S I P D Q Q L L K A L D E N A K
1401 ----+----*----+----*----+----*----+----*----+----* 1450
L I Q Q L E E E R I Q H Q K K V K
mfj12143 1401 CTTATCCAGCAGCTTGAAGAAGAGAGGATCCAGCATCAGAAAAAGGTCAA 1450
|| | |||||| |||||||||||||| || |||||||| ||||||||||
fj09914 784 CTCACCCAGCAACTTGAAGAAGAGAGAATTCAGCATCAACAAAAGGTCAA 833
L T Q Q L E E E R I Q H Q Q K V K
1451 ----+----*----+----*----+----*----+----*----+----* 1500
E L E E R L E N E A L H K E I H N
mfj12143 1451 AGAGCTGGAGGAGCGGCTGGAGAATGAAGCACTTCACAAAGAGATCCATA 1500
||| | || |||| || || |||||| |||| |||||||| || || |
fj09914 834 AGAATTAGAAGAGCAACTAGAAAATGAAACACTCCACAAAGAAATACACA 883
E L E E Q L E N E T L H K E I H N
1501 ----+----*----+----*----+----*----+----*----+----* 1550
L R Q Q L E L L E D D K R E L E
mfj12143 1501 ACCTCAGACAACAGCTGGAGCTTCTGGAAGACGACAAGAGGGAGCTAGAG 1550
|||||| ||| || ||||||||||| || || || || | ||| | ||
fj09914 884 ACCTCAAACAGCAACTGGAGCTTCTAGAGGAAGATAAAAAGGAATTGGAA 933
L K Q Q L E L L E E D K K E L E
1551 ----+----*----+----*----+----*----+----*----+----* 1600
Q K Y Q S S E E K A R N L K H S V
mfj12143 1551 CAGAAATACCAGAGCTCGGAGGAGAAGGCCCGGAACCTGAAGCATTCAGT 1600
|||||| |||| || || ||||| ||| | || | ||||| || ||
fj09914 934 TTGAAATATCAGAATTCTGAAGAGAAAGCCAGAAATTTAAAGCACTCTGT 983
L K Y Q N S E E K A R N L K H S V
1601 ----+----*----+----*----+----*----+----*----+----* 1650
D E L Q K R V N Q S E N S V P P P
mfj12143 1601 GGATGAACTTCAGAAGCGAGTGAACCAGTCTGAGAATTCGGTACCTCCCC 1650
|||||||| ||||| ||||||||||||||||||||||| |||||||| |
fj09914 984 TGATGAACTCCAGAAACGAGTGAACCAGTCTGAGAATTCAGTACCTCCAC 1033
D E L Q K R V N Q S E N S V P P P
1651 ----+----*----+----*----+----*----+----*----+----* 1700
P P P P P P L P P P P P N P I R
mfj12143 1651 CGCCTCCTCCTCCTCCACCTCTCCCCCCTCCACCTCCCAATCCAATCCGG 1700
| ||||||||||| ||||| || |||||||||||||||||||| |||||
fj09914 1034 CACCTCCTCCTCCACCACCACTTCCCCCTCCACCTCCCAATCCTATCCGA 1083
P P P P P P L P P P P P N P I R
1701 ----+----*----+----*----+----*----+----*----+----* 1750
S L M S M I R K R S H P S G N S A
mfj12143 1701 TCCCTCATGTCTATGATCCGGAAGCGATCTCACCCCAGTGGCAATAGTGC 1750
||||||||||| ||||||||||| ||||| ||||||||||||| | ||||
fj09914 1084 TCCCTCATGTCCATGATCCGGAAACGATCCCACCCCAGTGGCAGTGGTGC 1133
S L M S M I R K R S H P S G S G A
1751 ----+----*----+----*----+----*----+----*----+----* 1800
K K E K T T Q P E T A E E V T D L
mfj12143 1751 TAAGAAAGAAAAGACAACTCAGCCAGAGACAGCTGAGGAAGTCACAGACC 1800
||||||||||||| ||||||| ||||| ||| |||| ||||||||||| |
fj09914 1134 TAAGAAAGAAAAGGCAACTCAACCAGAAACAACTGAAGAAGTCACAGATC 1183
K K E K A T Q P E T T E E V T D L
1801 ----+----*----+----*----+----*----+----*----+----* 1850
K R Q A V E E M M D R I K K G V
mfj12143 1801 TGAAGAGGCAAGCAGTGGAAGAGATGATGGACAGAATTAAGAAGGGAGTT 1850
| |||||||||||||| |||||||||||||| |||||||| |||||||||
fj09914 1184 TAAAGAGGCAAGCAGTTGAAGAGATGATGGATAGAATTAAAAAGGGAGTT 1233
K R Q A V E E M M D R I K K G V
1851 ----+----*----+----*----+----*----+----*----+----* 1900
H L R P V N Q T A R P K A K P D S
mfj12143 1851 CATCTTAGACCGGTTAACCAGACAGCCAGACCCAAGGCAAAGCCAGACTC 1900
||||||||||| ||||| |||||||||||||| ||| |||||||||| ||
fj09914 1234 CATCTTAGACCCGTTAATCAGACAGCCAGACCGAAGACAAAGCCAGAATC 1283
H L R P V N Q T A R P K T K P E S
1901 ----+----*----+----*----+----*----+----*----+----* 1950
L K G S E S A V D E L K G I L
mfj12143 1901 TCTCAAGGGCTCAGAAAGTGCGGTGGATGAGCTGAAGGGAATCCTGGGGA 1950
| || |||| |||||||| |||||||| || || ||||| |||
fj09914 1284 TTCGAAAGGCTGCGAAAGTGCAGTGGATGAACTAAAAGGAATACTG.... 1329
S K G C E S A V D E L K G I L
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mfj12143 1951 CACTTAACAAATCCACTAGTTCGAGAAGCTTAAAATCCCTTGGCCCTGAG 2000
fj09914 1330 .................................................. 1330
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mfj12143 2001 AACAGTGAAACTGAGTTAGAGAGGATTTTACGTCGCAGAAAGCTGACGGC 2050
fj09914 1330 .................................................. 1330
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mfj12143 2051 AGAAGCAGATAGCAGTAGTCCTACCGGGATATTAGCCACCTCAGAGTCCA 2100
fj09914 1330 .................................................. 1330
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mfj12143 2101 AGTCCATGCCAGTGTTGGGTTCTGTATCCAGTGTAACAAAATCAGCCTTG 2150
fj09914 1330 .................................................. 1330
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mfj12143 2151 AACAAGAAAACTCTGGAGGCAGAATTCAACAACCCGTGTCCCCTAACACC 2200
fj09914 1330 .................................................. 1330
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mfj12143 2201 TGAGCCAGGTGAAGGGCCCCGTAAATTGGAAGGATGCACGAATCCCAAGG 2250
fj09914 1330 .................................................. 1330
2251 ----+----*----+----*----+----*----+----*----+----* 2300
A S Q *
mfj12143 2251 TTACCTTTCAGCCTCCCAGTAAAGGTGGATACAGGAGAAAATGTGTGGGC 2300
||||||||||| ||||| ||||| ||||| | | |
fj09914 1330 ..........GCCTCCCAGTAGCATTGGATGCAGGAAAAAATACATTGAC 1369
A S Q *
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mfj12143 2301 AGTGAAAACCAAGCTGAGCCAGTTGTAGTATTAGATCCTGTTTCCACACA 2350
||||||| ||||| || ||||||||||| |||||||||||||| |||||
fj09914 1370 GGTGAAAAACAAGCCGAACCAGTTGTAGTTTTAGATCCTGTTTCTACACA 1419
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mfj12143 2351 CGAACCCCAAACCAAAGACCAGGCTGCTGAAAAAGACCCAACTCAATTCG 2400
|||||||||||||||||||||| |||||||||||| ||||||||| |
fj09914 1420 TGAACCCCAAACCAAAGACCAGGTTGCTGAAAAAGATCCAACTCAACACA 1469
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mfj12143 2401 AGGAGGAGGGAGGTGAAACCCAACCAGAATACAAAGAAGACAGCGGTGGG 2450
||||||| | ||| |||| ||||||||| |||||||||||||| ||
fj09914 1470 AGGAGGATGAAGGCGAAATTCAACCAGAAAACAAAGAAGACAGCATTGAA 1519
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mfj12143 2451 AAAACAGGAGAGACGGACAGTTCCAACTGCTGATC..TGAAACCAGAGGC 2498
|| ||||||| ||||| |||||||||||||| | || | || |
fj09914 1520 AACGTGAGAGAGACAGACAGCTCCAACTGCTGATCCATAAACCAGAAGCC 1569
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mfj12143 2499 TGGCAGGTTGGTGGGGCCTTCTCAAGGAGCACGTGGCTCGTCTGCGTGTA 2548
|| || ||| | | |||| |||| ||||| || | || | ||
fj09914 1570 TGACATGTTTGGAAGTCCTTTTCAATAAGCACATGATTAGTGT.TGTTAT 1618
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mfj12143 2549 ACCGGCAGGAACTGTTGGACATTC...........CTTTGTTCTGGCCAC 2587
| |||| | |||| | |||||| || | ||| | ||
fj09914 1619 ATTGGCAAGGGCTGTAG.ACATTCTGCTCTGGTCACTGTATTCAGAATAC 1667
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mfj12143 2588 ACACTTCTTTGCTGGTATCAC.TTTGTAAGTAGC......AATCATAAGT 2630
| |||||| ||||| |||| |||||||||||| || |||||||
fj09914 1668 A.GGTTCTTTTCTGGTGTCACTTTTGTAAGTAGCAACTATAAACATAAGT 1716
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mfj12143 2631 AAGCTGTTTAGCAAAATGCATCTTCTGGGTAG........TTTTTAATCT 2672
|||||||||||||||| || ||| |||| ||||| ||||
fj09914 1717 AAGCTGTTTAGCAAAACACACATTCCTAGTAGGTTTTGGTTTTTTGATCT 1766
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mfj12143 2673 TTACAGGAGTGAGGGTTCTTTCC.GGTTTCTATATGAAGTATGACTTCCC 2721
||| | ||||| || ||||| ||| || ||| ||||||||||||
fj09914 1767 TTATAAAGATGAGGTTTTTTTCCTAGTTACTGTATTAAGTATGACTTCTT 1816
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mfj12143 2722 TGAGGCGGTGGC...GGAACTCAGAGGTTGGTGTCTTTACAGGGAACATA 2768
| || ||| | || ||||| |||| | |||| ||| || |
fj09914 1817 TTAGAAGGTTACAAAAAAATTCAGATGTTGATACCTTTTTAGGAAATGTG 1866
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mfj12143 2769 TGTACCCCTCATCAAATTATTCACGGGAAAATTCAAGGTGGTTGCTGGTA 2818
|||| |||||||||| | |||| || ||||| ||| ||
fj09914 1867 CATACCACTCATCAAATGGAATGCT.GAAAGTTTGAGGTGCTTGTATATA 1915
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mfj12143 2819 ACTGTATAAACAGAGACCACCAAACTTAACAATTATCTTAAAGGCACCCT 2868
| | ||||||| | | ||| | | | || ||||| || |||
fj09914 1916 ATCGGATAAACAAAACTGATCAACC..CAATGTGATTTTAAAAGCCCCC. 1962
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mfj12143 2869 TTAATCCAAGCCCTAGGGCATGGAGAGACCAAGGCAAGAGGATCACGTGA 2918
fj09914 1963 .................................................. 1963
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mfj12143 2919 GCCTGAGTCTTAGTTTGGATCACACAGTACAACTCCATATAAAGAACATA 2968
fj09914 1963 .................................................. 1963
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mfj12143 2969 TAAAGAAAAGAAGGCCCGCAAGAGTCTCTGGGGTCTGGTCTTC.TGATGG 3017
||||||| | | | | ||||||| || || ||||||
fj09914 1963 ......AAAGAAGCTTC.......TGTTTTGGGTCTGATCCTCTTGATGG 1999
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mfj12143 3018 .GAAACTGCAGCAGCCTCAACGTCAGTGGGTCCTATAGCGTCTCTGTTTT 3066
|||||||||||||| | | | ||||| || | || | ||| |
fj09914 2000 AGAAACTGCAGCAGCATGGAAATTGTTGGGTACTGTGGCATACAAGTTAT 2049
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mfj12143 3067 GAAGGGTGCGTGAGACCTTCCGTCTCTGAGCTCAGGAGGTGGCATCA... 3113
|| || | |||||||| ||||||||
fj09914 2050 TTTCTACAGTAGACTGAGATAAACTGAAAACTCAGGAGCTGGCATCAAAC 2099
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mfj12143 3114 ...TGGACTCTTAG...GTCTCAATTGAACACA..GTTGACTATTGTGTG 3155
| | | | ||| || | |||| ||||| ||| ||||||| ||
fj09914 2100 TCGTAGTCCCATAGTCAGTGTTAATTACACACATTGTTAACTATTGGATG 2149
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mfj12143 3156 GAAATCATGACC......CTGTGTCCAAGGCTTTACAGAGTCCTTCAGGG 3199
||| | | ||||||||| || | | | ||| | ||
fj09914 2150 AAAAATACATGCTATTGATTGTGTCCAAAGCCTCCCGAGGACCTCCGTGG 2199
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mfj12143 3200 TGATGTCTTGGCAGCATCAACAGAGAATTGGCTTAGAGGGACGCTCAAAC 3249
|||| ||| ||| | || | |||| || || | | | |||||
fj09914 2200 GGATGCTCTGGTAGCCTGAATACAGAA....CTGAGGTGAAAGTCCAAAC 2245
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mfj12143 3250 CTTGAATTTAACAGGGATTCCTCGGTAAGCTACTAGTTCTGTTCCATGAG 3299
||||||||| |||| | | ||||| | | | ||||| | |||||
fj09914 2246 CTTGAATTTTACAGTAGTAAGTTGGTAAACCATGTGCTCTGTGCTATGAG 2295
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mfj12143 3300 TTAACTGTGTTTTCCCACACATTCACGTGCCACAAGTACCATATTTTACA 3349
|||| | |||||||||| | | | | ||| ||||||||||||||||||
fj09914 2296 TTAATTATGTTTTCCCAAATACTAATGTGGCACAAGTACCATATTTTATC 2345
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mfj12143 3350 CCAGCTCTCACGCACA.....GTGAAGATAAGTGACAAGCACACATTGTT 3394
|| ||| | | ||| |||||||||||||||||||||||| ||
fj09914 2346 AGAGTTCTTATGTACAGTATGGTGAAGATAAGTGACAAGCACACA...TT 2392
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mfj12143 3395 TTTCTCCCTTCACTGCGGATCTATACTACATGGGTCTTTTCTTGTTTTGT 3444
||||| ||||||||| | |||||| |||| ||| | || |||||||
fj09914 2393 TTTCTTGCTTCACTGCTGTTCTATATTACACAGGTTTGTTGTTGTTTT.. 2440
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mfj12143 3445 TTTGTTTTGTTTTGTTTTTTAGAGGAAATTAAGTGGTAGTT....TCTAA 3490
|||| | | ||||||||| |||||| |||||
fj09914 2441 ..............TTTTAAAAAAGAAATTAAGCAGTAGTTAGTCTCTAA 2476
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mfj12143 3491 GAATACAATGTTTCACACTACCACGGTGAATAAATAGAAATGTAATCAGG 3540
|||||||||||||| ||||||| |||||||||||||||||||||||||
fj09914 2477 AAATACAATGTTTCAGGCTACCACAGTGAATAAATAGAAATGTAATCAGG 2526
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mfj12143 3541 GATTTAAAAAAAAAAACTTATGCAGGTTTTCAAAGTTGATTGTTTCAAAA 3590
|||| ||||||||||||||||||| ||||||||||||||||||||||||
fj09914 2527 GATT..AAAAAAAAAACTTATGCAGCTTTTCAAAGTTGATTGTTTCAAAA 2574
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mfj12143 3591 TTGGTGTTTATTTAAAATAAGTGGTAATGTACTTGAGTGCACTTTTTATG 3640
|||||||||||||||||||||||||||||||||||| |||||||||||||
fj09914 2575 TTGGTGTTTATTTAAAATAAGTGGTAATGTACTTGAATGCACTTTTTATG 2624
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mfj12143 3641 ATAATGATTCAGTAATGGTAATTTTACTATTAAGGAAATGGAAAGGCTTA 3690
| ||||||||||||||||||||||||||||||| |||| |||||| |||
fj09914 2625 ACAATGATTCAGTAATGGTAATTTTACTATTAAAGAAAGTGAAAGGTTTA 2674
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mfj12143 3691 GTTTTGTTAGCATGACTCGGCATGTAGCTGTCAGGTGCTCTGCACCTGAG 3740
|||||||||||||| ||| |||||||||||||||||| | | ||||| ||
fj09914 2675 GTTTTGTTAGCATGGCTCAGCATGTAGCTGTCAGGTGTTTTTCACCTAAG 2724
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mfj12143 3741 GGCAAAAGAAAATGA...TAACAATTGCAGTAGTTGTATCCTATTGTATT 3787
||||||||||||||| ||| ||||||||||||||||| |||||||||
fj09914 2725 GGCAAAAGAAAATGATAGTAATAATTGCAGTAGTTGTATTGTATTGTATT 2774
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mfj12143 3788 TTTGCACGTGTGCTACTAGCGTGGGCCTGGGGAGGTGGGAAGGCAGGTGA 3837
|||||||||||| || ||| | ||| || |||||||| ||||||||
fj09914 2775 TTTGCACGTGTGGTA..AGCATAGGCTTGAAGAGGTGGGTAGGCAGGTAC 2822
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mfj12143 3838 GGACACTTCCTCGGCTTGGGGACAATTCTCTTTCTGTAGGGTCAATGGGC 3887
||||||| |||| || |||| |||||||||| | || | ||
fj09914 2823 ATGTACTTCCTAAATTTGGAGATAATTATCTTTCTGTAAGTTCGTTATGC 2872
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mfj12143 3888 TTGACTGTTTTCCCTGTCTGTCAGTGCTGATTTTATA..TCCCTGTCAGT 3935
|||||||||| | ||| || | |||||||||| | | | ||| |
fj09914 2873 TTGACTGTTTCCATGTTCTCCCAATAATGATTTTATAGTTACTTATCACT 2922
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mfj12143 3936 TTACTCATGGGGAATTAAAACGCGATTTTTTTTTTC.............. 3971
|||||||||| ||||||||||| || ||||| |
fj09914 2923 TTACTCATGGAGAATTAAAACGTAATGTTTTTCAACTGTATCTTTCTTTA 2972
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mfj12143 3972 .................................................. 3972
fj09914 2973 ACTGGATAATACTGCTATATGATATGCTTACTACAGACTGCATTAATTCA 3022
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mfj12143 3972 .................................................. 3972
fj09914 3023 CGAAACGAATTCTGTTATGCTGTAATTTGAACTCTCCTCACCACAACTTA 3072
4151 ----+----*----+----*----+-- 4177
mfj12143 3972 ........................... 3972
fj09914 3073 TTAAAAAGGCACCAATAGTTTCCCATT 3099