FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0819.ptfa, 468 aa vs ./tmplib.26680 library 1768549 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 10.0630+/-0.00724; mu= -8.5997+/- 0.478 mean_var=353.1907+/-85.715, 0's: 0 Z-trim: 7 B-trim: 25 in 1/35 Lambda= 0.0682 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mFLJ00407 ( 1081 res) msh04044 (1081) 412 54 5e-08 mFLJ00139 ( 992 res) mbp09110 ( 992) 370 50 8.4e-07 mKIAA0903 ( 1242 res) mfj01081 (1242) 364 50 1.5e-06 mKIAA1668 ( 883 res) mpf01101 ( 883) 351 48 2.8e-06 mFLJ00043 ( 431 res) msk06005 ( 431) 306 43 3.7e-05 >>mFLJ00407 ( 1081 res) msh04044 (1081 aa) initn: 461 init1: 412 opt: 412 Z-score: 236.4 bits: 54.3 E(): 5e-08 Smith-Waterman score: 437; 31.169% identity (34.657% ungapped) in 308 aa overlap (171-447:771-1078) 150 160 170 180 190 mKIAA0 PPSDSGGPDGSVTSSEGSSGKSKKRSSLFSPRRNKKEKKTKGEARPPEKPSPG---LPED :....:: ..: . : :.:: . : mFLJ00 FCCHTCEATLWPGGYGQHPGDGHFYCLQHLPQEDQKEADNNGSLESQELPTPGDSNMQPD 750 760 770 780 790 800 200 210 220 230 240 mKIAA0 VVAKPKSLWKSVFSGYKKDKKK---KSDEK----SCSSTPSSGATVD-SGQRRASPMVRA . : . . : : . .. .: :. : . :.::: . : : ..: mFLJ00 PSSPPVTRVSPVPSPSQPARRLIRLSSLERLRLSSLNIIPDSGAEPPPKPPRSCSDLARE 810 820 830 840 850 860 250 260 270 280 290 mKIAA0 ELQLR--------RQLSFSEDSDLSSDDILERSSQKSKREPRTYTEEELSAKLTRRVQ-- :. . . : . ..:. :. .. ..:: : :: : .. mFLJ00 SLKSSFVGWGVPVQAPQVPEAIEKGDDEEEEEEEEEEEEEPLPPLEPELEQTLLTLAKNP 870 880 890 900 910 920 300 310 320 330 340 mKIAA0 ----------KAARRQAKQEELKRLHRAQIIQRQLEQVEEKQRQLEERGVAVEKALRGEA .. :.::.::.::. .:: :::.:...: .:.:: .:. .: ::: :. mFLJ00 GAMTKYPTWRRTLMRRAKEEEMKRFCKAQAIQRRLNEIEATMRELEAEGTKLELALRKES 930 940 950 960 970 980 350 360 370 380 390 400 mKIAA0 GMGKKDDPKLMQEWFKLVQEKNAMVRYESELMIFARELELEDRQSRLQQELRERMAVEDH . ... ... ..:.:.::..: :.:::: ..::.::..: .:..::: : :. mFLJ00 SSPEQQKKLWLDQLLRLIQKKNSLVTEEAELMITVQELDLEEKQRQLDHELRGYMNREET 990 1000 1010 1020 1030 1040 410 420 430 440 450 460 mKIAA0 LKTEGELSEEKKILNEMLEVVEQRDSLVALLEEQRLREKEEDKDLEAAMLCKGFSLDWS .:::..:. :...: ..::::.:::.:. . ::.:::: mFLJ00 MKTEADLQSENQVLRKLLEVVNQRDALIQFQEERRLREMPA 1050 1060 1070 1080 >>mFLJ00139 ( 992 res) mbp09110 (992 aa) initn: 328 init1: 270 opt: 370 Z-score: 214.5 bits: 50.1 E(): 8.4e-07 Smith-Waterman score: 379; 26.606% identity (30.208% ungapped) in 436 aa overlap (76-463:539-970) 50 60 70 80 90 100 mKIAA0 VPPQKRGLPLVSAEAKELAEERMRAREKSVKSQALRDAMAKQLSRMQAMEMVSS-----R : . . :: :.. :: ::. .. . mFLJ00 TVVSATNGRVPTVVTAHTGRVPAVMNTSASKVSPVVDAPAQESSREQALSVLRKALPALT 510 520 530 540 550 560 110 120 130 140 150 mKIAA0 SHTAQSQGKELGSESTRHPSLRGTQEPT-LKHEATSEEILSPPSDSGGPDGSVTSSEGSS . .:. .. . . :. .: .. : . . : . :. . . :. . :.. mFLJ00 GSGTQAPNRSFPATSSVLVTLPKNEVPQKVPSDKLSALTTQTPNFTIKLEPSAPVNVGNT 570 580 590 600 610 620 160 170 180 190 200 mKIAA0 G---KSKKRSSLFSPRRNKKE--KKTKGEARPPEKPSP----GL---PEDVVAKPKSLWK . .. :.: .::: .: .. ..:. . :.: : :: :. : . : mFLJ00 AVFLQAGKKSPSISPRVGKTSVGSRPQAEVAGVKGPGPISQEGQEEGPEGWRARLKPVDK 630 640 650 660 670 680 210 220 230 240 mKIAA0 SVFSGYKKDKKKK---------SDEKSCSSTPSS-GATVDSGQRRASP----------MV .. .: . ..:. ...:. ::. :: :. : :.. .: . mFLJ00 KTPAGRSLEQKEPVLAEPRIGDTSRKASSSSDSSVHITLTSIQHKRKPCPAGSGPSPAAL 690 700 710 720 730 740 250 260 270 280 290 300 mKIAA0 RAELQLRRQLSFSEDSDLSSDDILERSSQKSKREPRTYTEEELSAKLTRRVQK------A . :..:. . :.:.: :. .:.. :. ::. .. .:. . : mFLJ00 SPSPSHRKKLAVPPSLDVSAD-WLQPEPKKQEDGTRSCKEEKSPTRWSRERSAVLDSGLA 750 760 770 780 790 800 310 320 330 340 350 mKIAA0 ARRQAKQEELKRLHRAQI----IQRQLEQVEEKQRQLEERGVAVEKALRGEAGMGKKDDP .: . ::: : .::::...: . :: ::: .:: ::. : ...:. mFLJ00 PPGEAVTSPV-RLHPDYIPQEELQRQLQDIESQLDALELRGVELEKRLRAAEGDASEDS- 810 820 830 840 850 860 360 370 380 390 400 410 mKIAA0 KLMQEWFKLVQEKNAMVRYESELMIFARELELEDRQSRLQQELRERMAVEDHLKTEGELS :: .::.:..::. ..: ::::: ... .::..: :: :::. : . ::. . . mFLJ00 -LMVDWFRLIHEKQLLLRLESELMYKSKDQRLEEQQLDLQGELRRLMDKPEGLKSPQDRQ 870 880 890 900 910 920 420 430 440 450 460 mKIAA0 EEKKILNEMLEVVEQRDSLVALLEEQRLREKEEDKDLEAAMLCKGFSLDWS .:...:......:..:...: .:.:.::::.:::. :: . :.. mFLJ00 REQELLSQYVNTVNDRSDIVDFLDEDRLREQEEDQMLENMIQNLGLQRKKSKSFLSKIWS 930 940 950 960 970 980 mFLJ00 SKSKSGQA 990 >>mKIAA0903 ( 1242 res) mfj01081 (1242 aa) initn: 364 init1: 261 opt: 364 Z-score: 210.1 bits: 49.6 E(): 1.5e-06 Smith-Waterman score: 365; 24.520% identity (28.117% ungapped) in 469 aa overlap (25-458:782-1225) 10 20 30 40 50 mKIAA0 VEDTYDDKTEDSSLQEKFFTPPSCWSRSEKLQAKENGRLPPLEQDVPPQKRGL- ..:. . : . : .:.: .: : mKIAA0 KMEKSRSLECRLDGELAITKPNVSSPSKLGYNRDTDFTKKPCASLRQIESDPDADKNTLN 760 770 780 790 800 810 60 70 80 90 100 mKIAA0 ----PLVSAEAKELA-EERMRAREKSVKSQALRDAMAKQLSRM--QAMEMVSSRSHTAQS : ... . :. .:... : . . :: ::: : :. .: . ::. . :. mKIAA0 HADHPNKAVQHRMLSRQEELKERARVLLEQARRDAAFKVGSKHGGSAAPALCSRQLNDQQ 820 830 840 850 860 870 110 120 130 140 mKIAA0 ----------QGKEL------GSESTRHPSLRGTQEPTLKH--EATSEEILSPPSDSGG- ....: : . .. :: ::. .:...: . :.. mKIAA0 DEERRRQLRERARQLIAEARCGVKMSELPSYGEMAAEKLKERSKASGDENDNIEIDTNEE 880 890 900 910 920 930 150 160 170 180 190 200 mKIAA0 -PDGSVTSSEGSSGKSKKRSSLFSPRRNKKEKKTKGEARPPEKPSPGLPEDVVAKPKSLW :.: :.. :.. .. .:.: .:..:.: . . : . :. . :.. mKIAA0 IPEGFVVG--GGDELTNIESDLDNPEQNSKVVDLRLK-----KLLEAQPQVANLLPSAAQ 940 950 960 970 980 210 220 230 240 250 260 mKIAA0 KSVFSGYKKDKKKKSDEKSCSSTPSSGATVDSGQRRASPMVRAELQLRRQLSFSEDSDLS :.: . .. .: ::. . :. . .: ..: . :..:: . mKIAA0 KAVTEASEQGEK-------------SGVE----DLRTERLQKATERFRNPVVFNKDSTVR 990 1000 1010 1020 270 280 290 300 310 320 mKIAA0 SDDILERSSQKSKREPRTYTEEELSAKLTRRVQKAA-----RRQAKQEELKRLHRAQIIQ . . :. :: . .:. .. .. : ... : .:. ...: .: . mKIAA0 KTQ-LQSFSQYVENRPEMKRQRSIQEDTKRGTEEKAEITETQRKPSEDEKGFKDTSQYVV 1030 1040 1050 1060 1070 1080 330 340 350 360 370 mKIAA0 RQLEQVEEKQRQLEERGVAVEKALRG--EAGMGKKDDPKLMQEWFKLVQEKNAMVRYESE .: .:..:.:.. :.. ::: :: ..: . ... .::::: ::..:::..: .. mKIAA0 GELAALENEQKQIDTRAALVEKRLRYLMDTGRNTEEEEAMMQEWFMLVNKKNALIRRMNQ 1090 1100 1110 1120 1130 1140 380 390 400 410 420 430 mKIAA0 LMIFARELELEDRQSRLQQELRERMAVEDHLKTEGELSEEKKILNEMLEVVEQRDSLVAL : .. .: .:: : :..::: .:.:: :::.. .:. .:.:.. .:..::.:: mKIAA0 LSLLEKEHDLERRYELLNRELRAMLAIEDWQKTEAQKRREQLLLDELVALVDKRDALVRD 1150 1160 1170 1180 1190 1200 440 450 460 mKIAA0 LEEQRLREKEEDKDLEAAMLCKGFSLDWS :. :. . .:::. :: .. mKIAA0 LDAQEKQAEEEDEHLERTLEQNKGKMAKKEEKCALQ 1210 1220 1230 1240 >>mKIAA1668 ( 883 res) mpf01101 (883 aa) initn: 392 init1: 247 opt: 351 Z-score: 205.0 bits: 48.2 E(): 2.8e-06 Smith-Waterman score: 379; 27.322% identity (29.940% ungapped) in 366 aa overlap (114-463:496-845) 90 100 110 120 130 140 mKIAA0 MAKQLSRMQAMEMVSSRSHTAQSQGKELGSESTRHPSLRGTQEPTLKHEATSEEILSPPS .. ..:. :. . : .:. ::: mKIAA1 PPVPSPAPAPSEATPKSLHPWYGITPTSSPKTKKRPAPRAPSASPLAIHASRLSHSEPPS 470 480 490 500 510 520 150 160 170 180 190 200 mKIAA0 DSGGPDGSVTS-SEGSSGKSKKRSSLFSPR--RNKKEKKTKGEARPPEKPSPGLPEDVVA . .: :: : : ::... . : : ..... .. . : . . : . mKIAA1 ATPSPALSVESLSSESSSHTANAEPLEPPAVPKSSSDPAVHVPGTPGTSGNSVTPSANSS 530 540 550 560 570 580 210 220 230 240 250 mKIAA0 KPKSLWKSVFSGYKKDK-KKKSDEKSCSSTPSSGAT----VDSGQRRASPMV---RAELQ .: . :: . . . :.. . :. : :::: . .:.: .: : .:: mKIAA1 LSSSGELGQPSGEQMPQVRTKGSAGTHSTKPFSGATPTPFLLAGDRNPAPPVGSASPQLQ 590 600 610 620 630 640 260 270 280 290 300 mKIAA0 LR---RQLSFSEDSDLSSDDILERSSQKSK--REPRTYTEEELSAKLTRRVQKAARRQAK .. .. :.. . :.. ...... .: : : : . :.:: : . mKIAA1 IKSSCKENPFNRKPSPSASPTVRKATKGAKPVRPPAPGHGFPL---IKRKVQ--ADQYIP 650 660 670 680 690 700 310 320 330 340 350 360 mKIAA0 QEELKRLHRAQIIQRQLEQVEEKQRQLEERGVAVEKALRGEAGMGKKDDPKLMQEWFKLV .:. : .....:.. ::. :: .:. ::: :. :..:: .. .::::. mKIAA1 EED---------IYGEMDNIERQLDALEHSGVLLEEKLRGGANEGSEDD--MLVDWFKLI 710 720 730 740 370 380 390 400 410 420 mKIAA0 QEKNAMVRYESELMIFARELELEDRQSRLQQELRERMAVEDHLKTEGELSEEKKILNEML .::. .:: ::::. .. .::.::. .. ::: . .. :. . ..:: ...:.. mKIAA1 HEKHLLVRRESELIYVFKQQNLEQRQADVEFELRCLLNKPEKDWTDEDRAREKVLMQELM 750 760 770 780 790 800 430 440 450 460 mKIAA0 EVVEQRDSLVALLEEQRLREKEEDKDLEAAMLCKGFSLDWS ..::::..: :.:.: ::.:::: ::. . : :. mKIAA1 TLIEQRDAIVNCLDEDRQREEEEDKMLETMIKKKDFQREAESDSKKKGKFKTIKVLKFLG 810 820 830 840 850 860 mKIAA1 NKREAKSKAPGDKS 870 880 >>mFLJ00043 ( 431 res) msk06005 (431 aa) initn: 253 init1: 228 opt: 306 Z-score: 184.9 bits: 43.4 E(): 3.7e-05 Smith-Waterman score: 330; 26.364% identity (27.974% ungapped) in 330 aa overlap (148-458:82-411) 120 130 140 150 160 170 mKIAA0 HPSLRGTQEPTLKHEATSEEILSPPSDSGGPDGSVTSSEGSSGKSKKRSSLFSPRRNKKE : .:. . :. : .:.. .: . : mFLJ00 GNAQPSLPDCLDAGDLAQRLREHGAEVPTEPKEAVNRGTGAIPKVASRDTDLSCSSKDGE 60 70 80 90 100 110 180 190 200 210 220 230 mKIAA0 KKTKGEARPPEKPSPGLPEDVVAKP----KSLWKSV-FSGYKKDKKKKSDEKSCSSTPSS .. :: : : :. : . : ..: ..: :: . .... . .. : mFLJ00 AEVAQEAIPQEAPTDGPRARSSTTPVVPAEGLVNGVGASGGVRLRRSSVNGEAGPVPPPR 120 130 140 150 160 170 240 250 260 270 280 mKIAA0 GATVDSGQRRASPMVRAELQLRRQLSFSEDSDLSSDDILERSSQKSKRE---PRTYTEEE . : : :. . . . .:: . ::: :.. :. . . . : : . . . mFLJ00 AHGSFSHVRDADLLKKRRSRLRNSNSFSVDDQDSGAAVGAGPAGPGAVEGPNPASSPDAN 180 190 200 210 220 230 290 300 310 320 330 340 mKIAA0 -LSAKLTRR-------VQKAARRQAKQEELKRLH-RAQIIQRQLEQVEEKQRQLEERGVA : : . .. ..... ... :.:.. .: . .:. .:..: :.. :.. mFLJ00 PLPAPVPQQPPGGPPPTEESSPSLGEEAGLQRFQDTSQYVCAELQALEQEQGQIDGRAAE 240 250 260 270 280 290 350 360 370 380 390 mKIAA0 VEKALRG--EAGMGKKDDPKLMQEWFKLVQEKNAMVRYESELMIFARELELEDRQSRLQQ ::: ::. :.: .. .. :.:::: ::..:::..: ...:... .: .:: : :.. mFLJ00 VEKQLRSLMESGANRLQEEVLIQEWFTLVNKKNALIRRQDQLQLLIEEQDLERRFELLSR 300 310 320 330 340 350 400 410 420 430 440 450 mKIAA0 ELRERMAVEDHLKTEGELSEEKKILNEMLEVVEQRDSLVALLEEQRLREKEEDKDLEAAM ::: .:.:. :: .. .:. .:.:.. .:.::: :: :.... :::. :: .. mFLJ00 ELRAMLAIEEWQKTVAQQHREQLLLEELVSLVNQRDELVRDLDQKERIALEEDERLERGL 360 370 380 390 400 410 460 mKIAA0 LCKGFSLDWS mFLJ00 EQRRRKVSRQLSRRERCTLS 420 430 468 residues in 1 query sequences 1768549 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:29:32 2006 done: Mon Mar 27 10:29:32 2006 Scan time: 0.710 Display time: 0.110 Function used was FASTA [version 3.4t11 Apr 17, 2002]