FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1454.ptfa, 1393 aa vs ./tmplib.26680 library 1767624 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 8.8353+/-0.00805; mu= -0.0077+/- 0.532 mean_var=402.6822+/-96.782, 0's: 0 Z-trim: 19 B-trim: 23 in 1/35 Lambda= 0.0639 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 40, opt: 28, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1052 ( 1172 res) mfj00977 (1172) 300 43 0.00031 >>mKIAA1052 ( 1172 res) mfj00977 (1172 aa) initn: 107 init1: 71 opt: 300 Z-score: 168.4 bits: 43.4 E(): 0.00031 Smith-Waterman score: 310; 21.669% identity (24.576% ungapped) in 803 aa overlap (122-886:66-811) 100 110 120 130 140 150 mKIAA1 HPRKIDLRARYWAFLFDNLRRAVDEIYVTCESD-QSVVECKEVLMMLDYYVRDFKALIDW ::: ::: .:.: : :. :: mKIAA1 AKGLLASVHEGKNALSLLTLGEETNEEDEEESDNQSVRSSSELLKNLHL---DLGALGGN 40 50 60 70 80 90 160 170 180 190 200 mKIAA1 IQLQEKLEKTDAQSRPTSLAWEV-KKMSPGRHVIQSPSTDRMNVTSTARRSLNFGSLPGA .. .:. . .. ... .:: .. . .::. . : ..: ..... .: . :. : mKIAA1 FEYEESPRTSQPDKKDVSLDSDADRPPTPGK--LFSQGADSSVASANGSKSQGRGASP-- 100 110 120 130 140 210 220 230 240 250 260 mKIAA1 VTAPCLAPTGVSWADKVKAHHTGSAPPEATPAQSCAPMTVQKTSRKNERKDAEGWETVQR : . . :: . :: : :. . . :: .....:: . :: mKIAA1 -----WNPQKENENSDPKASSSQMAP-ELDPGGD-------QPSRASKKQQAE--DPVQA 150 160 170 180 190 270 280 290 300 310 320 mKIAA1 GRP--VRSRSTAVIPKVSLVTETLRSKDDSDKENICLLPEESIQKGKLED-RCSTVESLS :. : .:.: :: . : :: . ::: .:.:.: : : :. . mKIAA1 GKEGECRRESAAKEPK-----------EASALENTSDVSEESEIHGHLKDARHSGSEASG 200 210 220 230 240 330 340 350 360 370 380 mKIAA1 KDSLLHSSDHPLSERTQFTVCILD-----DVKNSGSSQDSSVHTSEIPAIDSDAVCVAPQ :.: . :. :.... .:: : ..: . ... : :: . . :: mKIAA1 PKSFLGLD---LGFRSRISEHLLDGDTLSPVLGGGHWEAQGLDQEEQD--DSKSSIAEPQ 250 260 270 280 290 390 400 410 420 430 mKIAA1 NTTALPTDRVPAETTGMVTEMTDPSDISNSMAEVLAKKEELADRLEKANEEAIA---SAI . . ..: ... . .. :. . ... .. :. : . :. .. : . mKIAA1 SKHTQGSEREHLQSS-LHSQATEEGPLQTLEGQPEWKEAEGPGKDSVASPAPLSLLQSLL 300 310 320 330 340 350 440 450 460 470 480 490 mKIAA1 AEEEQLTREIEAEENNDINIETDNDSDF---SASMGSGSLSFCG-VSLDWNDVLADYEAR . : . : :.... .:. ... . :.. : . .: . . . . .: . . mKIAA1 KAQLQKATAEEKEKEEETKIREEESRRLVCLRAQVQSRTEAFENQIRTEQQAALQRLREE 360 370 380 390 400 410 500 510 520 530 540 550 mKIAA1 ESWRQNTSWGDIVEEEPARLPGHGIHMHEKLSSPSRKRTIAESKKKYEEKHMKAQQLREK :.. ... :. .: . ...:.: . :. : .: ::. ::::. mKIAA1 AETLQKAERASL--EQKSRRALE--QLREQLEAEERSAQAALRAEKEAEKEAALLQLREQ 420 430 440 450 460 470 560 570 580 590 600 610 mKIAA1 LREEKTLKLQKLLEREK-DVRKWKEELLDQRRRM---MEEKLLHAEFKREVQLQAIVKKA :. :. . : .... .... : ..... ...:. :. :.:.::: . : mKIAA1 LEGERKEAVAGLEKKHSAELEQLCSSLEAKHQEVISSLQKKIEGAQQKEEAQLQESLGWA 480 490 500 510 520 530 620 630 640 650 660 mKIAA1 -QEEEAKVNEIA-FINTLEA--QNKRHDVLSKLKEYEQRLNELQEERQRRQEEKQARDEA :. . ::.... . . : . ..::..: .:.:.......::. ... . . : :: mKIAA1 EQRAHQKVHQVTEYEQELSSLLRDKRQEVE---REHERKMDKMKEEHWQEMADARERYEA 540 550 560 570 580 670 680 690 700 710 720 mKIAA1 VQERKRA-LEAERQARVEELLMKRKEQEARIEQQRQEKEKAREDAARERARDREERLAAL ....:: : .. ...:.: :. .: ..:..:::... :: :.: ::.:..: : mKIAA1 EERKQRADLLGHLTGELERL---RRAHERELESMRQEQDQQLEDL-RRRHRDHERKLQDL 590 600 610 620 630 640 730 740 750 760 770 780 mKIAA1 TAAQQEAMEELQKKI-QLK-HDESIRRHMEQIEQRKEKAA---ELSSGRHASTDYAPKLT . . .... .. ::. ..:.::.. . . . ...:: : ... : . : : mKIAA1 EVELSSRTKDVKARLAQLNVQEENIRKEKQLLLDAQRQAALEREEATATHQHLEEAKKEH 650 660 670 680 690 700 790 800 810 820 830 mKIAA1 PY--ERKKQCS-LCNVLIASEVYLFSHIKGKKHQ-QAVRENSSIQGRELSDEEVEHLSLK . : :.: . : . .: : :.. . : : .... :.... ..: :: mKIAA1 THLLETKQQLRRTIDDLRVRRVELESQVDLLQAQSQRLQKHLSLEAEVQRKQDV----LK 710 720 730 740 750 760 840 850 860 870 880 890 mKIAA1 KYVVDIVIESAAP-PEPVKDGEERQK--NKKKAKKIKARMNIRAKEYENLVETKNSGSES ...... .:.: ::: :. .: . .: ..... ... .: . .:. mKIAA1 EMAAEM---NASPHPEPGLHIEDLRKSLDTNKNQEVSSSLSLSKEEIDLSMESVRQFLSA 770 780 790 800 810 900 910 920 930 940 950 mKIAA1 PYKAKLQRLTKDLVKQLQVQDSGSWVNNKASALDRTLGEIARILEKENVPDQISFQVAGG mKIAA1 EGVAVRNAKEFLVRQTRSMRRRQTALKAAQQHWRHELASAQEVDEDLPGTEVLGNMRKNL 820 830 840 850 860 870 1393 residues in 1 query sequences 1767624 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:45:24 2006 done: Mon Mar 27 10:45:25 2006 Scan time: 1.220 Display time: 0.090 Function used was FASTA [version 3.4t11 Apr 17, 2002]