# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj11041.fasta.nr -Q ../query/mKIAA0613.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0613, 730 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7878954 sequences Expectation_n fit: rho(ln(x))= 7.0932+/-0.00022; mu= 5.0470+/- 0.012 mean_var=221.9153+/-42.414, 0's: 35 Z-trim: 148 B-trim: 0 in 0/67 Lambda= 0.086096 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|84872215|ref|NP_001034163.1| LIM domain binding ( 684) 4677 594.3 4.9e-167 gi|84875544|ref|NP_001034161.1| LIM domain binding ( 679) 4627 588.1 3.6e-165 gi|28144145|gb|AAO26189.1| PDZ-LIM protein cypher1 ( 679) 4624 587.7 4.7e-165 gi|73953183|ref|XP_865054.1| PREDICTED: similar to ( 690) 3628 464.0 8.3e-128 gi|194206187|ref|XP_001916995.1| PREDICTED: simila ( 687) 3537 452.7 2.1e-124 gi|81906753|sp|Q9JKS4.1|LDB3_MOUSE RecName: Full=L ( 723) 3505 448.8 3.4e-123 gi|11612596|gb|AAD42950.2|AF114378_1 PDZ-LIM prote ( 723) 3502 448.4 4.4e-123 gi|83288256|sp|O75112.2|LDB3_HUMAN RecName: Full=L ( 727) 3274 420.1 1.5e-114 gi|109089097|ref|XP_001085158.1| PREDICTED: simila ( 725) 3227 414.2 8.4e-113 gi|73953161|ref|XP_864848.1| PREDICTED: similar to ( 674) 2915 375.4 3.7e-101 gi|126272208|ref|XP_001363449.1| PREDICTED: simila ( 679) 2759 356.1 2.5e-95 gi|6969631|gb|AAF33848.1| oracle 2 protein [Mus mu ( 661) 2654 343.0 2.1e-91 gi|28144143|gb|AAO26188.1| PDZ-LIM protein cypher3 ( 661) 2651 342.6 2.7e-91 gi|28144147|gb|AAO26190.1| PDZ-LIM protein cypher3 ( 622) 2633 340.4 1.2e-90 gi|126272210|ref|XP_001363519.1| PREDICTED: simila ( 740) 2596 335.9 3.3e-89 gi|194388262|dbj|BAG65515.1| unnamed protein produ ( 732) 2535 328.3 6.3e-87 gi|122056614|ref|NP_001073583.1| LIM domain bindin ( 617) 2507 324.7 6.3e-86 gi|109089095|ref|XP_001085274.1| PREDICTED: simila ( 625) 2483 321.7 5e-85 gi|5441371|emb|CAB46729.1| ZASP protein [Homo sapi ( 470) 2470 320.0 1.3e-84 gi|109089099|ref|XP_001084921.1| PREDICTED: simila ( 478) 2466 319.5 1.9e-84 gi|5441369|emb|CAB46728.1| ZASP protein [Homo sapi ( 617) 2466 319.6 2.2e-84 gi|119600730|gb|EAW80324.1| LIM domain binding 3, ( 443) 2428 314.7 4.7e-83 gi|73953181|ref|XP_852115.1| PREDICTED: similar to ( 621) 2256 293.5 1.5e-76 gi|73953185|ref|XP_536411.2| PREDICTED: similar to ( 632) 2256 293.6 1.6e-76 gi|194042262|ref|XP_001925986.1| PREDICTED: simila ( 675) 2170 282.9 2.7e-73 gi|126272206|ref|XP_001363364.1| PREDICTED: simila ( 622) 2111 275.5 4.1e-71 gi|194042260|ref|XP_001925900.1| PREDICTED: simila ( 607) 2105 274.8 6.7e-71 gi|194378210|dbj|BAG57855.1| unnamed protein produ ( 648) 2063 269.6 2.6e-69 gi|119600733|gb|EAW80327.1| LIM domain binding 3, ( 667) 2063 269.6 2.7e-69 gi|73953177|ref|XP_865000.1| PREDICTED: similar to ( 463) 2057 268.7 3.6e-69 gi|126272204|ref|XP_001363282.1| PREDICTED: simila ( 627) 2049 267.8 8.5e-69 gi|149635747|ref|XP_001509123.1| PREDICTED: simila ( 391) 1924 252.0 3e-64 gi|148692935|gb|EDL24882.1| LIM domain binding 3, ( 309) 1662 219.4 1.6e-54 gi|11612598|gb|AAD42951.2|AF114379_1 PDZ-LIM prote ( 288) 1660 219.1 1.9e-54 gi|5441500|emb|CAB46747.1| orf [Mus musculus] ( 288) 1654 218.3 3.1e-54 gi|119600728|gb|EAW80322.1| LIM domain binding 3, ( 380) 1652 218.2 4.4e-54 gi|73953175|ref|XP_864982.1| PREDICTED: similar to ( 288) 1644 217.1 7.4e-54 gi|54035563|gb|AAH83721.1| Ldb3 protein [Rattus no ( 283) 1610 212.9 1.4e-52 gi|73953169|ref|XP_864929.1| PREDICTED: similar to ( 290) 1610 212.9 1.4e-52 gi|73953171|ref|XP_864947.1| PREDICTED: similar to ( 291) 1595 211.0 5e-52 gi|73953163|ref|XP_864869.1| PREDICTED: similar to ( 283) 1594 210.9 5.4e-52 gi|73953167|ref|XP_864908.1| PREDICTED: similar to ( 290) 1594 210.9 5.5e-52 gi|224052298|ref|XP_002190242.1| PREDICTED: simila ( 616) 1590 210.8 1.2e-51 gi|15012060|gb|AAH10929.1| LIM domain binding 3 [H ( 283) 1584 209.6 1.3e-51 gi|126272212|ref|XP_001363607.1| PREDICTED: simila ( 288) 1581 209.3 1.7e-51 gi|5441367|emb|CAB46727.1| ZASP protein [Homo sapi ( 283) 1571 208.0 3.9e-51 gi|126272214|ref|XP_001363678.1| PREDICTED: simila ( 283) 1542 204.4 4.8e-50 gi|63030059|gb|AAY27893.1| cypher/ZASP splice vari ( 498) 1512 201.0 8.9e-49 gi|63030039|gb|AAY27883.1| cypher/ZASP splice vari ( 649) 1513 201.3 9.6e-49 gi|63030041|gb|AAY27884.1| cypher/ZASP splice vari ( 643) 1512 201.2 1e-48 >>gi|84872215|ref|NP_001034163.1| LIM domain binding 3 i (684 aa) initn: 4677 init1: 4677 opt: 4677 Z-score: 3155.1 bits: 594.3 E(): 4.9e-167 Smith-Waterman score: 4677; 99.854% identity (99.854% similar) in 684 aa overlap (47-730:1-684) 20 30 40 50 60 70 mKIAA0 GAGKIGCIRVLSPDSSYCLPAEEATAVSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTIS :::::::::::::::::::::::::::::: gi|848 MSYSVTLTGPGPWGFRLQGGKDFNMPLTIS 10 20 30 80 90 100 110 120 130 mKIAA0 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA0 TTAPPIQSPLPVIPHQKVVANSPANADYQERFNPSVLKDSALSTHKPIEVKGLGGKATII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 TTAPPIQSPLPVIPHQKVVANSPANADYQERFNPSVLKDSALSTHKPIEVKGLGGKATII 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA0 HAQYNTPISMYSQDAIMDAIAGQAQAQGSDFSGASPLASLPVKDLAVDSASPVYQAVIKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 HAQYNTPISMYSQDAIMDAIAGQAQAQGSDFSGASPLASLPVKDLAVDSASPVYQAVIKT 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA0 QSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSSTPIEHAPVCTSQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 QSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSSTPIEHAPVCTSQA 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA0 TSPLLPASAQSPAAASPIAASPTLATAAATHAAAASAAGPAASPVENPRPQASAYSPAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 TSPLLPASAQSPAAASPIAASPTLATAAATHAAAASAAGPAASPVENPRPQASAYSPAAA 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA0 ASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASSYSPSPGANYSPTPYTPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 ASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASSYSPSPGANYSPTPYTPSP 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA0 APAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYTPTPSAAYSGGPSESASRPPWVTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 APAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYTPTPSAAYSGGPSESASRPPWVTD 400 410 420 430 440 450 500 510 520 530 540 550 mKIAA0 DSFSQKFAPGKSTTTVSKQTLPWGAPAYNPTGPQVTPLARGTFQRAERFPASSRTPLCGH :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|848 DSFSQKFAPGKSTTTVSKQTLPRGAPAYNPTGPQVTPLARGTFQRAERFPASSRTPLCGH 460 470 480 490 500 510 560 570 580 590 600 610 mKIAA0 CNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 CNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKC 520 530 540 550 560 570 620 630 640 650 660 670 mKIAA0 NTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 NTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCD 580 590 600 610 620 630 680 690 700 710 720 730 mKIAA0 FPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 FPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV 640 650 660 670 680 >>gi|84875544|ref|NP_001034161.1| LIM domain binding 3 i (679 aa) initn: 3455 init1: 3455 opt: 4627 Z-score: 3121.6 bits: 588.1 E(): 3.6e-165 Smith-Waterman score: 4627; 99.123% identity (99.123% similar) in 684 aa overlap (47-730:1-679) 20 30 40 50 60 70 mKIAA0 GAGKIGCIRVLSPDSSYCLPAEEATAVSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTIS :::::::::::::::::::::::::::::: gi|848 MSYSVTLTGPGPWGFRLQGGKDFNMPLTIS 10 20 30 80 90 100 110 120 130 mKIAA0 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA0 TTAPPIQSPLPVIPHQKVVANSPANADYQERFNPSVLKDSALSTHKPIEVKGLGGKATII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 TTAPPIQSPLPVIPHQKVVANSPANADYQERFNPSVLKDSALSTHKPIEVKGLGGKATII 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA0 HAQYNTPISMYSQDAIMDAIAGQAQAQGSDFSGASPLASLPVKDLAVDSASPVYQAVIKT ::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|848 HAQYNTPISMYSQDAIMDAIAGQAQAQGSDFSG-----SLPVKDLAVDSASPVYQAVIKT 160 170 180 190 200 260 270 280 290 300 310 mKIAA0 QSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSSTPIEHAPVCTSQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 QSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSSTPIEHAPVCTSQA 210 220 230 240 250 260 320 330 340 350 360 370 mKIAA0 TSPLLPASAQSPAAASPIAASPTLATAAATHAAAASAAGPAASPVENPRPQASAYSPAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 TSPLLPASAQSPAAASPIAASPTLATAAATHAAAASAAGPAASPVENPRPQASAYSPAAA 270 280 290 300 310 320 380 390 400 410 420 430 mKIAA0 ASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASSYSPSPGANYSPTPYTPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 ASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASSYSPSPGANYSPTPYTPSP 330 340 350 360 370 380 440 450 460 470 480 490 mKIAA0 APAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYTPTPSAAYSGGPSESASRPPWVTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 APAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYTPTPSAAYSGGPSESASRPPWVTD 390 400 410 420 430 440 500 510 520 530 540 550 mKIAA0 DSFSQKFAPGKSTTTVSKQTLPWGAPAYNPTGPQVTPLARGTFQRAERFPASSRTPLCGH :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|848 DSFSQKFAPGKSTTTVSKQTLPRGAPAYNPTGPQVTPLARGTFQRAERFPASSRTPLCGH 450 460 470 480 490 500 560 570 580 590 600 610 mKIAA0 CNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 CNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKC 510 520 530 540 550 560 620 630 640 650 660 670 mKIAA0 NTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 NTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCD 570 580 590 600 610 620 680 690 700 710 720 730 mKIAA0 FPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|848 FPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV 630 640 650 660 670 >>gi|28144145|gb|AAO26189.1| PDZ-LIM protein cypher1s [M (679 aa) initn: 3452 init1: 3452 opt: 4624 Z-score: 3119.6 bits: 587.7 E(): 4.7e-165 Smith-Waterman score: 4624; 98.977% identity (99.123% similar) in 684 aa overlap (47-730:1-679) 20 30 40 50 60 70 mKIAA0 GAGKIGCIRVLSPDSSYCLPAEEATAVSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTIS :::::::::::::::::::::::::::::: gi|281 MSYSVTLTGPGPWGFRLQGGKDFNMPLTIS 10 20 30 80 90 100 110 120 130 mKIAA0 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|281 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA0 TTAPPIQSPLPVIPHQKVVANSPANADYQERFNPSVLKDSALSTHKPIEVKGLGGKATII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|281 TTAPPIQSPLPVIPHQKVVANSPANADYQERFNPSVLKDSALSTHKPIEVKGLGGKATII 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA0 HAQYNTPISMYSQDAIMDAIAGQAQAQGSDFSGASPLASLPVKDLAVDSASPVYQAVIKT ::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|281 HAQYNTPISMYSQDAIMDAIAGQAQAQGSDFSG-----SLPVKDLAVDSASPVYQAVIKT 160 170 180 190 200 260 270 280 290 300 310 mKIAA0 QSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSSTPIEHAPVCTSQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|281 QSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSSTPIEHAPVCTSQA 210 220 230 240 250 260 320 330 340 350 360 370 mKIAA0 TSPLLPASAQSPAAASPIAASPTLATAAATHAAAASAAGPAASPVENPRPQASAYSPAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|281 TSPLLPASAQSPAAASPIAASPTLATAAATHAAAASAAGPAASPVENPRPQASAYSPAAA 270 280 290 300 310 320 380 390 400 410 420 430 mKIAA0 ASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASSYSPSPGANYSPTPYTPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|281 ASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASSYSPSPGANYSPTPYTPSP 330 340 350 360 370 380 440 450 460 470 480 490 mKIAA0 APAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYTPTPSAAYSGGPSESASRPPWVTD ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|281 APAYTPSPAPTYTPSPAPTYTPSPAPAYTPSPAPNYTPTPSAAYSGGPSESASRPPWVTD 390 400 410 420 430 440 500 510 520 530 540 550 mKIAA0 DSFSQKFAPGKSTTTVSKQTLPWGAPAYNPTGPQVTPLARGTFQRAERFPASSRTPLCGH :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|281 DSFSQKFAPGKSTTTVSKQTLPRGAPAYNPTGPQVTPLARGTFQRAERFPASSRTPLCGH 450 460 470 480 490 500 560 570 580 590 600 610 mKIAA0 CNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|281 CNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKC 510 520 530 540 550 560 620 630 640 650 660 670 mKIAA0 NTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|281 NTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCD 570 580 590 600 610 620 680 690 700 710 720 730 mKIAA0 FPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|281 FPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV 630 640 650 660 670 >>gi|73953183|ref|XP_865054.1| PREDICTED: similar to LIM (690 aa) initn: 2786 init1: 2099 opt: 3628 Z-score: 2450.9 bits: 464.0 E(): 8.3e-128 Smith-Waterman score: 3628; 77.825% identity (86.981% similar) in 699 aa overlap (47-730:1-690) 20 30 40 50 60 70 mKIAA0 GAGKIGCIRVLSPDSSYCLPAEEATAVSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTIS :::::::::::::::::::::::::::::: gi|739 MSYSVTLTGPGPWGFRLQGGKDFNMPLTIS 10 20 30 80 90 100 110 120 130 mKIAA0 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS 40 50 60 70 80 90 140 150 160 170 180 mKIAA0 TTAPPIQSPLPVIPHQKVVAN----SPANADYQERFNPSVLKDSA---LSTHKPIEVKGL :::::.::::::::::: :. ::. : ..: : :. .: : : gi|739 TTAPPVQSPLPVIPHQKDPAGDMSGSPT-ARSPGPLGPPELGPSSSPSFSQSPPRGGPGT 100 110 120 130 140 190 200 210 220 230 240 mKIAA0 ----GGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQGSDFSGAS-PLASLPVKDLAVD : .. ::::.::..:: ... . .. :. ::. : .:::.:::::: gi|739 EGAPGPRGQGRPAQYNNPIGLYSAETLREMAQVYRMSLGGKAWGAGLPGGSLPIKDLAVD 150 160 170 180 190 200 250 260 270 280 290 300 mKIAA0 SASPVYQAVIKTQSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSST :::::::::::.:.:::::::::::::::::::::::::::::::::::::::::::::: gi|739 SASPVYQAVIKNQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSST 210 220 230 240 250 260 310 320 330 340 350 360 mKIAA0 PIEHAPVCTSQATSPLLPASAQSPAAASPIAASPTLATAAATHAAAASAAGPAASPVENP : ::::::::::..:: ::::: :::: :::: ..::: :.:: ::.::...: gi|739 PTEHAPVCTSQAATPLPPASAQPPAAAPRSAASPPPSAAAAC----AAAATPASSPADSP 270 280 290 300 310 320 370 380 390 400 410 420 mKIAA0 RPQASAYSPAAAASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASSYSPSPG :::::::: : :.::::..: :::. ::::::::::::::::::::::.::.: .: :: gi|739 RPQASAYSLAKATSPAPASHP-YSEASAAPAPKPRVVTTASIRPSVYQPAPAGSKAPRPG 330 340 350 360 370 380 430 440 450 460 470 480 mKIAA0 ANYSPTPYTPSP-APAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPN--YTPTPSAAYS . :::. :. :... :: ::.:::.:.:::.: :::::::. :.:::::::. gi|739 GLTPPTPHPPTHHPPTHSTVPAATYSPSPGPSYSPAP---YTPSPAPGPGYSPTPSAAYG 390 400 410 420 430 440 490 500 510 520 530 540 mKIAA0 GGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQTLPWGAPAYNPTGPQVTPLARGTFQR ::: :::::::::.:::::::::::::....:.:::: :::.:.: ::::.::::: :: gi|739 GGPVESASRPPWVADDSFSQKFAPGKSSSSASRQTLPRGAPTYGPPGPQVSPLARGIVQR 450 460 470 480 490 500 550 560 570 580 590 600 mKIAA0 AERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYC :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|739 AERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYC 510 520 530 540 550 560 610 620 630 640 650 660 mKIAA0 ERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCE 570 580 590 600 610 620 670 680 690 700 710 720 mKIAA0 KDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLC :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KDYVNLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLC 630 640 650 660 670 680 730 mKIAA0 KKHAHAINV ::::::::: gi|739 KKHAHAINV 690 >>gi|194206187|ref|XP_001916995.1| PREDICTED: similar to (687 aa) initn: 4111 init1: 1512 opt: 3537 Z-score: 2389.8 bits: 452.7 E(): 2.1e-124 Smith-Waterman score: 4017; 85.613% identity (91.453% similar) in 702 aa overlap (47-730:1-687) 20 30 40 50 60 70 mKIAA0 GAGKIGCIRVLSPDSSYCLPAEEATAVSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTIS :::::::::::::::::::::::::::::: gi|194 MSYSVTLTGPGPWGFRLQGGKDFNMPLTIS 10 20 30 80 90 100 110 120 mKIAA0 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKS------- ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSAGMHVAS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 KRPIPISTTAPPI-QSP------LPVIPHQK--VVANSPANADYQERFNPSVLKDSALST .: . : . :.: : :. . ::::::::::::::::::.:::::::: gi|194 NRSLLSPRMAATLGQDPALDTNGTPGTPELRPTVVANSPANADYQERFNPSALKDSALST 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 HKPIEVKGLGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQGSDFSGASPLASLPVKD ::::::::::::::::::::::::::::::::::::::::::::::::: :::.:: gi|194 HKPIEVKGLGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQGSDFSG-----SLPIKD 160 170 180 190 200 250 260 270 280 290 300 mKIAA0 LAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALR :::::::::::::::.:.:::::::::::::::::::::::::::::::.:::::::::: gi|194 LAVDSASPVYQAVIKNQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEEALR 210 220 230 240 250 260 310 320 330 340 350 360 mKIAA0 RSSTPIEHAPVCTSQATSPLLPASAQSPAAASPIAASPTLATAAATHAAAASAAGPAASP ::::::::::::::::..:: ::::: :::::: .::: ::::: :.:.:::..::.:: gi|194 RSSTPIEHAPVCTSQAATPLPPASAQPPAAASPSTASPPPATAAA-HTATASATAPASSP 270 280 290 300 310 320 370 380 390 400 410 420 mKIAA0 VENPRPQASAYSPAAAASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASSYS ...:::::::::::::.: ::..:: :::.::::::::::::::::::::::::::..:: gi|194 ADSPRPQASAYSPAAASSSAPATHT-YSEAPAAPAPKPRVVTTASIRPSVYQPVPAATYS 330 340 350 360 370 380 430 440 450 460 470 480 mKIAA0 PSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPNYTPTPSAAY ::::::::::::::::::::::: :::::: ::::::::::::.:.:.::::: gi|194 PSPGANYSPTPYTPSPAPAYTPS--------PAPTYSSSPAPAYTPSPAPSYNPAPSAAY 390 400 410 420 430 490 500 510 520 530 mKIAA0 SGGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQTLPWGAPAYNPTG--PQVTPLARGT ::::.:::::::::::::::::::::::::..:::::: :.: .: :. :::::: gi|194 SGGPAESASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPCLHPDDRPPKCPPLARGT 440 450 460 470 480 490 540 550 560 570 580 590 mKIAA0 FQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNN :::::::::::::::::::..::::::::::::::::::.::::::::::::::::::: gi|194 VQRAERFPASSRTPLCGHCNSIIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQNN 500 510 520 530 540 550 600 610 620 630 640 650 mKIAA0 VYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEP 560 570 580 590 600 610 660 670 680 690 700 710 mKIAA0 YCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDK 620 630 640 650 660 670 720 730 mKIAA0 PLCKKHAHAINV ::::::::::.: gi|194 PLCKKHAHAIHV 680 >>gi|81906753|sp|Q9JKS4.1|LDB3_MOUSE RecName: Full=LIM d (723 aa) initn: 4143 init1: 3455 opt: 3505 Z-score: 2368.1 bits: 448.8 E(): 3.4e-123 Smith-Waterman score: 4141; 86.326% identity (90.470% similar) in 724 aa overlap (47-730:1-723) 20 30 40 50 60 70 mKIAA0 GAGKIGCIRVLSPDSSYCLPAEEATAVSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTIS :::::::::::::::::::::::::::::: gi|819 MSYSVTLTGPGPWGFRLQGGKDFNMPLTIS 10 20 30 80 90 100 110 120 130 mKIAA0 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS 40 50 60 70 80 90 140 150 160 170 mKIAA0 TTAPPIQSPLPVIPHQKVVA-----------------NSPANADYQERFNPSVLKDSA-- ::::::::::::::::: : ::. .. . :. : . :. gi|819 TTAPPIQSPLPVIPHQKDPALDTNGSLATPSPSPEARASPGALEFGDTFSSSFSQTSVCS 100 110 120 130 140 150 180 190 200 210 mKIAA0 ---------LSTHKPI-EVKGLGGKATIIHA---------QYNTPISMYSQDAIMD-AIA : .:. .... :..... :::.::..:: ... . : gi|819 PLMEASGPVLPLGSPVAKASSEGAQGSVSPKVLPGPSQPRQYNNPIGLYSAETLREMAQM 160 170 180 190 200 210 220 230 240 250 260 270 mKIAA0 GQAQAQGSDFSGASPLA-SLPVKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQS : . .:. :::. :. :::::::::::::::::::::::::::::::::::::::::: gi|819 YQMSLRGKA-SGAGLLGGSLPVKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQS 220 230 240 250 260 280 290 300 310 320 330 mKIAA0 RSFRILAQMTGTEYMQDPDEEALRRSSTPIEHAPVCTSQATSPLLPASAQSPAAASPIAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 RSFRILAQMTGTEYMQDPDEEALRRSSTPIEHAPVCTSQATSPLLPASAQSPAAASPIAA 270 280 290 300 310 320 340 350 360 370 380 390 mKIAA0 SPTLATAAATHAAAASAAGPAASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPAAPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 SPTLATAAATHAAAASAAGPAASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPAAPAP 330 340 350 360 370 380 400 410 420 430 440 450 mKIAA0 KPRVVTTASIRPSVYQPVPASSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 KPRVVTTASIRPSVYQPVPASSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTY 390 400 410 420 430 440 460 470 480 490 500 510 mKIAA0 SPSPAPAYTPSPAPNYTPTPSAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 SPSPAPAYTPSPAPNYTPTPSAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQT 450 460 470 480 490 500 520 530 540 550 560 570 mKIAA0 LPWGAPAYNPTGPQVTPLARGTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPE :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 LPRGAPAYNPTGPQVTPLARGTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPE 510 520 530 540 550 560 580 590 600 610 620 630 mKIAA0 EFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 EFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTC 570 580 590 600 610 620 640 650 660 670 680 690 mKIAA0 FVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 FVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDT 630 640 650 660 670 680 700 710 720 730 mKIAA0 CFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV :::::::::::::::::::::::::::::::::: gi|819 CFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV 690 700 710 720 >>gi|11612596|gb|AAD42950.2|AF114378_1 PDZ-LIM protein c (723 aa) initn: 4140 init1: 3452 opt: 3502 Z-score: 2366.1 bits: 448.4 E(): 4.4e-123 Smith-Waterman score: 4138; 86.188% identity (90.470% similar) in 724 aa overlap (47-730:1-723) 20 30 40 50 60 70 mKIAA0 GAGKIGCIRVLSPDSSYCLPAEEATAVSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTIS :::::::::::::::::::::::::::::: gi|116 MSYSVTLTGPGPWGFRLQGGKDFNMPLTIS 10 20 30 80 90 100 110 120 130 mKIAA0 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS 40 50 60 70 80 90 140 150 160 170 mKIAA0 TTAPPIQSPLPVIPHQKVVA-----------------NSPANADYQERFNPSVLKDSA-- ::::::::::::::::: : ::. .. . :. : . :. gi|116 TTAPPIQSPLPVIPHQKDPALDTNGSLATPSPSPEARASPGALEFGDTFSSSFSQTSVCS 100 110 120 130 140 150 180 190 200 210 mKIAA0 ---------LSTHKPI-EVKGLGGKATIIHA---------QYNTPISMYSQDAIMD-AIA : .:. .... :..... :::.::..:: ... . : gi|116 PLMEASGPVLPLGSPVAKASSEGAQGSVSPKVLPGPSQPRQYNNPIGLYSAETLREMAQM 160 170 180 190 200 210 220 230 240 250 260 270 mKIAA0 GQAQAQGSDFSGASPLA-SLPVKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQS : . .:. :::. :. :::::::::::::::::::::::::::::::::::::::::: gi|116 YQMSLRGKA-SGAGLLGGSLPVKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNLQS 220 230 240 250 260 280 290 300 310 320 330 mKIAA0 RSFRILAQMTGTEYMQDPDEEALRRSSTPIEHAPVCTSQATSPLLPASAQSPAAASPIAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 RSFRILAQMTGTEYMQDPDEEALRRSSTPIEHAPVCTSQATSPLLPASAQSPAAASPIAA 270 280 290 300 310 320 340 350 360 370 380 390 mKIAA0 SPTLATAAATHAAAASAAGPAASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPAAPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 SPTLATAAATHAAAASAAGPAASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPAAPAP 330 340 350 360 370 380 400 410 420 430 440 450 mKIAA0 KPRVVTTASIRPSVYQPVPASSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 KPRVVTTASIRPSVYQPVPASSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPAPTY 390 400 410 420 430 440 460 470 480 490 500 510 mKIAA0 SPSPAPAYTPSPAPNYTPTPSAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQT .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 TPSPAPAYTPSPAPNYTPTPSAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTVSKQT 450 460 470 480 490 500 520 530 540 550 560 570 mKIAA0 LPWGAPAYNPTGPQVTPLARGTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPE :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 LPRGAPAYNPTGPQVTPLARGTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPE 510 520 530 540 550 560 580 590 600 610 620 630 mKIAA0 EFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 EFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWHTTC 570 580 590 600 610 620 640 650 660 670 680 690 mKIAA0 FVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 FVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDT 630 640 650 660 670 680 700 710 720 730 mKIAA0 CFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV :::::::::::::::::::::::::::::::::: gi|116 CFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV 690 700 710 720 >>gi|83288256|sp|O75112.2|LDB3_HUMAN RecName: Full=LIM d (727 aa) initn: 4603 init1: 2591 opt: 3274 Z-score: 2213.0 bits: 420.1 E(): 1.5e-114 Smith-Waterman score: 3916; 79.917% identity (88.308% similar) in 727 aa overlap (47-730:1-727) 20 30 40 50 60 70 mKIAA0 GAGKIGCIRVLSPDSSYCLPAEEATAVSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTIS :::::::::::::::::::::::::::::: gi|832 MSYSVTLTGPGPWGFRLQGGKDFNMPLTIS 10 20 30 80 90 100 110 120 130 mKIAA0 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|832 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS 40 50 60 70 80 90 140 150 160 170 mKIAA0 TTAPPIQSPLPVIPHQK---------VVANSPA-----------NADYQERFNPSVLKDS :::::.:.::::::::: .:: ::. . . . :.:. . : gi|832 TTAPPVQTPLPVIPHQKDPALDTNGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPS 100 110 120 130 140 150 180 190 200 210 mKIAA0 ALSTHKPIEVKG------------------LGGKATIIHAQ---YNTPISMYSQDAIMD- :.:. : :: :: .: ::.::..:: ... . gi|832 AFSSLAEASDPGPPRASLRAKTSPEGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREM 160 170 180 190 200 210 220 230 240 250 260 270 mKIAA0 AIAGQAQAQGSDFSGASPLASLPVKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNL : : . .:. . . : .:::.:::::::::::::::::.:.:::::::::::::::: gi|832 AQMYQMSLRGKASGVGLPGGSLPIKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNL 220 230 240 250 260 270 280 290 300 310 320 330 mKIAA0 QSRSFRILAQMTGTEYMQDPDEEALRRSSTPIEHAPVCTSQATSPLLPASAQSPAAASPI :::::::::::::::.:::::::::::::::::::::::::::.:::::::: :::::: gi|832 QSRSFRILAQMTGTEFMQDPDEEALRRSSTPIEHAPVCTSQATTPLLPASAQPPAAASPS 280 290 300 310 320 330 340 350 360 370 380 390 mKIAA0 AASPTLATAAA-THAAAASAAGPAASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPAA :::: :::::: : :.::...::.::...::::::.::::.::: ::..:::::::::: gi|832 AASPPLATAAAHTAIASASTTAPASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAA 340 350 360 370 380 390 400 410 420 430 440 450 mKIAA0 PAPKPRVVTTASIRPSVYQPVPASSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSPA ::::::::::::::::::::::::.::::::::::::::::::::::::::::.:::::. gi|832 PAPKPRVVTTASIRPSVYQPVPASTYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPV 400 410 420 430 440 450 460 470 480 490 500 510 mKIAA0 PTYSPSPAPAYTPSPAPNYTPTPSAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTVS :::.:::::::::::::::.:.::.::::::.: :::::::::::::::::::::::..: gi|832 PTYTPSPAPAYTPSPAPNYNPAPSVAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSIS 460 470 480 490 500 510 520 530 540 550 560 570 mKIAA0 KQTLPWGAPAYNPTGPQVTPLARGTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSW ::::: :.:::.:.:::: :::::: :::::::::::::::::::::::::::::::::: gi|832 KQTLPRGGPAYTPAGPQVPPLARGTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSW 520 530 540 550 560 570 580 590 600 610 620 630 mKIAA0 HPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTWH :::::.::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|832 HPEEFTCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWH 580 590 600 610 620 630 640 650 660 670 680 690 mKIAA0 TTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|832 TTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTW 640 650 660 670 680 690 700 710 720 730 mKIAA0 HDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV ::::::::::::::::::::::::.::::::::.::. gi|832 HDTCFICAVCHVNLEGQPFYSKKDRPLCKKHAHTINL 700 710 720 >>gi|109089097|ref|XP_001085158.1| PREDICTED: similar to (725 aa) initn: 4648 init1: 2076 opt: 3227 Z-score: 2181.5 bits: 414.2 E(): 8.4e-113 Smith-Waterman score: 3866; 79.533% identity (87.637% similar) in 728 aa overlap (47-730:1-725) 20 30 40 50 60 70 mKIAA0 GAGKIGCIRVLSPDSSYCLPAEEATAVSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTIS :::::::::::::::::::::::::::::: gi|109 MSYSVTLTGPGPWGFRLQGGKDFNMPLTIS 10 20 30 80 90 100 110 120 130 mKIAA0 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS 40 50 60 70 80 90 140 150 160 170 mKIAA0 TTAPPIQSPLPVIPHQK---------VVANSPA-----------NADYQERFNPSVLKDS :::::.:.::::::::: .:: ::. . . . :.:. : gi|109 TTAPPVQTPLPVIPHQKDPALDTNGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSPPS 100 110 120 130 140 150 180 190 200 210 mKIAA0 ALSTHKPIEVKG------------------LGGKATIIHAQ---YNTPISMYSQDAIMD- :.:. . : :: :: .: ::.::..:: ... . gi|109 AFSSLAEASAPGPPRVRLRAKTSPDGARDLLGPKALPGSSQPRQYNNPIGLYSAETLREM 160 170 180 190 200 210 220 230 240 250 260 270 mKIAA0 AIAGQAQAQGSDFSGASPLASLPVKDLAVDSASPVYQAVIKTQSKPEDEADEWARRSSNL : : . .:. . . : .:::.:::::::::::::::::.:.:::::::::::::::: gi|109 AQMYQMSLRGKASGVGLPGGSLPIKDLAVDSASPVYQAVIKNQNKPEDEADEWARRSSNL 220 230 240 250 260 270 280 290 300 310 320 330 mKIAA0 QSRSFRILAQMTGTEYMQDPDEEALRRSSTPIEHAPVCTSQATSPLLPASAQSPAAASPI :::::::::::::::.:::::::::::::::::::::::::::.:::::::: ::::: gi|109 QSRSFRILAQMTGTEFMQDPDEEALRRSSTPIEHAPVCTSQATTPLLPASAQPSAAASPS 280 290 300 310 320 330 340 350 360 370 380 390 mKIAA0 AASPTLATAAATHAAAASAAG--PAASPVENPRPQASAYSPAAAASPAPSAHTSYSEGPA :::: :::::: :.: .:::. ::.::...::::::.::::.::: ::..::::::::: gi|109 AASPPLATAAA-HTAITSAAATAPASSPADSPRPQASSYSPATAASSAPATHTSYSEGPA 340 350 360 370 380 400 410 420 430 440 450 mKIAA0 APAPKPRVVTTASIRPSVYQPVPASSYSPSPGANYSPTPYTPSPAPAYTPSPAPTYTPSP :::::::::::::::::::::::::.::::::::::::::::::.:::::::::.:::: gi|109 APAPKPRVVTTASIRPSVYQPVPASTYSPSPGANYSPTPYTPSPTPAYTPSPAPAYTPS- 390 400 410 420 430 440 460 470 480 490 500 510 mKIAA0 APTYSPSPAPAYTPSPAPNYTPTPSAAYSGGPSESASRPPWVTDDSFSQKFAPGKSTTTV :::.:::: ::::::::::.:.:::::::::.: :::::::::::::::::::::::.. gi|109 -PTYTPSPALAYTPSPAPNYNPAPSAAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSI 450 460 470 480 490 500 520 530 540 550 560 570 mKIAA0 SKQTLPWGAPAYNPTGPQVTPLARGTFQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRS :::::: :.:::.:.:::: :::::: ::::::::::::::::::::::::::::::::: gi|109 SKQTLPRGGPAYTPAGPQVPPLARGTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRS 510 520 530 540 550 560 580 590 600 610 620 630 mKIAA0 WHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKCNTKIMGEVMHALRQTW ::::::::::::.::::::::::::::::::::::::::.:::::::::::::::::::: gi|109 WHPEEFNCAYCKSSLADVCFVEEQNNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTW 570 580 590 600 610 620 640 650 660 670 680 690 mKIAA0 HTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 HTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHT 630 640 650 660 670 680 700 710 720 730 mKIAA0 WHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV :::::::::::::::::::::::::.::::::::.::. gi|109 WHDTCFICAVCHVNLEGQPFYSKKDRPLCKKHAHTINL 690 700 710 720 >>gi|73953161|ref|XP_864848.1| PREDICTED: similar to LIM (674 aa) initn: 2099 init1: 2099 opt: 2915 Z-score: 1972.4 bits: 375.4 E(): 3.7e-101 Smith-Waterman score: 4072; 86.754% identity (93.304% similar) in 687 aa overlap (47-730:1-674) 20 30 40 50 60 70 mKIAA0 GAGKIGCIRVLSPDSSYCLPAEEATAVSTSMSYSVTLTGPGPWGFRLQGGKDFNMPLTIS :::::::::::::::::::::::::::::: gi|739 MSYSVTLTGPGPWGFRLQGGKDFNMPLTIS 10 20 30 80 90 100 110 120 130 mKIAA0 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPIS 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA0 TTAPPIQSPLPVIPHQKVVANSPANADYQERFNPSVLKDSALSTHKPIEVKGLGGKATII :::::.:::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|739 TTAPPVQSPLPVIPHQKVVANSPANADYQERFNPSALKDSALSTHKPIEVKGLGGKATII 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA0 HAQYNTPISMYSQDAIMDAIAGQAQAQGSDFSGASPLASLPVKDLAVDSASPVYQAVIKT ::::::::::::::::::::::::::::::::: :::.:::::::::::::::::. gi|739 HAQYNTPISMYSQDAIMDAIAGQAQAQGSDFSG-----SLPIKDLAVDSASPVYQAVIKN 160 170 180 190 200 260 270 280 290 300 310 mKIAA0 QSKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSSTPIEHAPVCTSQA :.::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|739 QNKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSSTPTEHAPVCTSQA 210 220 230 240 250 260 320 330 340 350 360 370 mKIAA0 TSPLLPASAQSPAAASPIAASPTLATAAATHAAAASAAGPAASPVENPRPQASAYSPAAA ..:: ::::: :::: :::: ..::: :.:: ::.::...::::::::: : : gi|739 ATPLPPASAQPPAAAPRSAASPPPSAAAAC----AAAATPASSPADSPRPQASAYSLAKA 270 280 290 300 310 320 380 390 400 410 420 430 mKIAA0 ASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASSYSPSPGANYSPTPYTPSP .::::..: :::. ::::::::::::::::::::::.::.: .: ::. :::. :. gi|739 TSPAPASHP-YSEASAAPAPKPRVVTTASIRPSVYQPAPAGSKAPRPGGLTPPTPHPPTH 330 340 350 360 370 380 440 450 460 470 480 490 mKIAA0 -APAYTPSPAPTYTPSPAPTYSPSPAPAYTPSPAPN--YTPTPSAAYSGGPSESASRPPW :... :: ::.:::.:.:::.: :::::::. :.:::::::.::: :::::::: gi|739 HPPTHSTVPAATYSPSPGPSYSPAP---YTPSPAPGPGYSPTPSAAYGGGPVESASRPPW 390 400 410 420 430 500 510 520 530 540 550 mKIAA0 VTDDSFSQKFAPGKSTTTVSKQTLPWGAPAYNPTGPQVTPLARGTFQRAERFPASSRTPL :.:::::::::::::....:.:::: :::.:.: ::::.::::: :::::::::::::: gi|739 VADDSFSQKFAPGKSSSSASRQTLPRGAPTYGPPGPQVSPLARGIVQRAERFPASSRTPL 440 450 460 470 480 490 560 570 580 590 600 610 mKIAA0 CGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPIC :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|739 CGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFAPIC 500 510 520 530 540 550 620 630 640 650 660 670 mKIAA0 AKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCH :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|739 AKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKCH 560 570 580 590 600 610 680 690 700 710 720 730 mKIAA0 GCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV 620 630 640 650 660 670 730 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 11:56:30 2009 done: Sun Mar 15 12:04:35 2009 Total Scan time: 1068.880 Total Display time: 0.300 Function used was FASTA [version 34.26.5 April 26, 2007]