# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj10262.fasta.nr -Q ../query/mKIAA0693.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0693, 407 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7904519 sequences Expectation_n fit: rho(ln(x))= 6.6006+/-0.000199; mu= 3.6649+/- 0.011 mean_var=123.6261+/-23.254, 0's: 45 Z-trim: 113 B-trim: 4 in 1/66 Lambda= 0.115350 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|26344347|dbj|BAC35824.1| unnamed protein produc ( 402) 2758 469.9 4.5e-130 gi|26332743|dbj|BAC30089.1| unnamed protein produc ( 402) 2754 469.3 7.1e-130 gi|32451797|gb|AAH54730.1| Synovial sarcoma transl ( 402) 2750 468.6 1.1e-129 gi|149034049|gb|EDL88832.1| synovial sarcoma trans ( 402) 2743 467.4 2.5e-129 gi|148675360|gb|EDL07307.1| synovial sarcoma trans ( 395) 2698 459.9 4.5e-127 gi|14516833|gb|AAK53461.1| calcium-responsive tran ( 401) 2541 433.8 3.3e-119 gi|115304721|gb|AAI23449.1| Synovial sarcoma trans ( 402) 2520 430.3 3.7e-118 gi|126302735|ref|XP_001368343.1| PREDICTED: hypoth ( 402) 2504 427.7 2.4e-117 gi|20139981|sp|O75177.2|S18L1_HUMAN RecName: Full= ( 396) 2484 424.3 2.3e-116 gi|158256402|dbj|BAF84174.1| unnamed protein produ ( 396) 2481 423.8 3.3e-116 gi|123980010|gb|ABM81834.1| synovial sarcoma trans ( 396) 2479 423.5 4.2e-116 gi|224078462|ref|XP_002198777.1| PREDICTED: simila ( 402) 2472 422.3 9.5e-116 gi|118100623|ref|XP_417402.2| PREDICTED: hypotheti ( 402) 2471 422.2 1.1e-115 gi|194389536|dbj|BAG61729.1| unnamed protein produ ( 416) 2428 415.0 1.6e-113 gi|194224612|ref|XP_001491106.2| PREDICTED: simila ( 435) 2418 413.4 5.1e-113 gi|149636026|ref|XP_001505924.1| PREDICTED: hypoth ( 399) 2357 403.2 5.4e-110 gi|109091391|ref|XP_001089944.1| PREDICTED: simila ( 373) 2356 403.0 5.8e-110 gi|73992677|ref|XP_543083.2| PREDICTED: similar to ( 678) 2352 402.5 1.5e-109 gi|119595797|gb|EAW75391.1| synovial sarcoma trans ( 374) 2340 400.3 3.7e-109 gi|34365130|emb|CAE45918.1| hypothetical protein [ ( 374) 2339 400.2 4.1e-109 gi|50415475|gb|AAH77557.1| Ss18l1-prov protein [Xe ( 403) 2292 392.4 9.9e-107 gi|119595802|gb|EAW75396.1| synovial sarcoma trans ( 394) 2250 385.4 1.2e-104 gi|119595799|gb|EAW75393.1| synovial sarcoma trans ( 399) 2166 371.4 2e-100 gi|114682908|ref|XP_514762.2| PREDICTED: SS18-like ( 407) 2056 353.1 6.6e-95 gi|149034050|gb|EDL88833.1| synovial sarcoma trans ( 371) 2038 350.1 4.9e-94 gi|119595795|gb|EAW75389.1| synovial sarcoma trans ( 514) 2032 349.2 1.3e-93 gi|148675359|gb|EDL07306.1| synovial sarcoma trans ( 364) 2011 345.6 1.1e-92 gi|37782416|gb|AAP34454.1| LP2261 [Homo sapiens] ( 314) 1948 335.0 1.4e-89 gi|119595800|gb|EAW75394.1| synovial sarcoma trans ( 525) 1857 320.1 7.5e-85 gi|119595796|gb|EAW75390.1| synovial sarcoma trans ( 265) 1652 285.7 8.3e-75 gi|193785077|dbj|BAG54230.1| unnamed protein produ ( 265) 1647 284.9 1.5e-74 gi|90083827|dbj|BAE90864.1| unnamed protein produc ( 381) 1548 268.5 1.8e-69 gi|194386672|dbj|BAG61146.1| unnamed protein produ ( 336) 1209 212.1 1.5e-52 gi|28502885|gb|AAH47188.1| Synovial sarcoma transl ( 368) 1096 193.3 7.6e-47 gi|74141543|dbj|BAE38546.1| unnamed protein produc ( 418) 945 168.2 3.1e-39 gi|3915034|sp|Q62280.1|SSXT_MOUSE RecName: Full=Pr ( 418) 945 168.2 3.1e-39 gi|26350825|dbj|BAC39049.1| unnamed protein produc ( 418) 942 167.7 4.3e-39 gi|199561150|ref|NP_001094370.1| synovial sarcoma ( 418) 940 167.4 5.5e-39 gi|126321743|ref|XP_001362192.1| PREDICTED: simila ( 418) 940 167.4 5.5e-39 gi|119621617|gb|EAX01212.1| synovial sarcoma trans ( 412) 938 167.1 6.8e-39 gi|19879848|gb|AAM00188.1| SYT protein [Homo sapie ( 414) 938 167.1 6.8e-39 gi|158260043|dbj|BAF82199.1| unnamed protein produ ( 418) 938 167.1 6.9e-39 gi|20141795|sp|Q15532.3|SSXT_HUMAN RecName: Full=P ( 418) 938 167.1 6.9e-39 gi|13384208|gb|AAK21314.1| SYT variant 1 [Homo sap ( 422) 938 167.1 6.9e-39 gi|144226026|dbj|BAF56183.1| fusion protein SYT-SS ( 488) 938 167.1 7.7e-39 gi|144226022|dbj|BAF56181.1| fusion protein SYT-SS ( 488) 938 167.1 7.7e-39 gi|215274958|sp|Q5RFQ1.2|SSXT_PONAB RecName: Full= ( 418) 934 166.4 1.1e-38 gi|114672770|ref|XP_512069.2| PREDICTED: similar t ( 479) 934 166.4 1.2e-38 gi|55725077|emb|CAH89406.1| hypothetical protein [ ( 418) 933 166.2 1.2e-38 gi|8809766|gb|AAF79937.1| unknown [Homo sapiens] ( 492) 934 166.5 1.2e-38 >>gi|26344347|dbj|BAC35824.1| unnamed protein product [M (402 aa) initn: 2758 init1: 2758 opt: 2758 Z-score: 2491.6 bits: 469.9 E(): 4.5e-130 Smith-Waterman score: 2758; 100.000% identity (100.000% similar) in 402 aa overlap (6-407:1-402) 10 20 30 40 50 60 mKIAA0 VRATTMSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPP 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 ASLMQGQIGNGPNHVSMQQTAQSTLPTTSMSLSGSGHGTGPGYSHSGPTSQSVPMQGQGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ASLMQGQIGNGPNHVSMQQTAQSTLPTTSMSLSGSGHGTGPGYSHSGPTSQSVPMQGQGA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 ISNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ISNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 RPMAPYRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RPMAPYRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQ 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 SYDRSFEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SYDRSFEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQ 300 310 320 330 340 350 370 380 390 400 mKIAA0 GAPSQYSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ ::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GAPSQYSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ 360 370 380 390 400 >>gi|26332743|dbj|BAC30089.1| unnamed protein product [M (402 aa) initn: 2754 init1: 2754 opt: 2754 Z-score: 2488.0 bits: 469.3 E(): 7.1e-130 Smith-Waterman score: 2754; 99.751% identity (100.000% similar) in 402 aa overlap (6-407:1-402) 10 20 30 40 50 60 mKIAA0 VRATTMSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPP 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 ASLMQGQIGNGPNHVSMQQTAQSTLPTTSMSLSGSGHGTGPGYSHSGPTSQSVPMQGQGA ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|263 ASLMQGQIGNGPNHLSMQQTAQSTLPTTSMSLSGSGHGTGPGYSHSGPTSQSVPMQGQGA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 ISNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ISNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 RPMAPYRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RPMAPYRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQ 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 SYDRSFEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SYDRSFEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQ 300 310 320 330 340 350 370 380 390 400 mKIAA0 GAPSQYSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ ::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GAPSQYSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ 360 370 380 390 400 >>gi|32451797|gb|AAH54730.1| Synovial sarcoma translocat (402 aa) initn: 2750 init1: 2750 opt: 2750 Z-score: 2484.4 bits: 468.6 E(): 1.1e-129 Smith-Waterman score: 2750; 99.751% identity (99.751% similar) in 402 aa overlap (6-407:1-402) 10 20 30 40 50 60 mKIAA0 VRATTMSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPP 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 ASLMQGQIGNGPNHVSMQQTAQSTLPTTSMSLSGSGHGTGPGYSHSGPTSQSVPMQGQGA ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: gi|324 ASLMQGQIGNGPNHVSMQQTAQSTLPTTSMSLSGSGHGTGPGYIHSGPTSQSVPMQGQGA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 ISNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 ISNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 RPMAPYRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 RPMAPYRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQ 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 SYDRSFEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 SYDRSFEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQ 300 310 320 330 340 350 370 380 390 400 mKIAA0 GAPSQYSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ ::::::::::::::::::::::::::::::::::::::::::::::: gi|324 GAPSQYSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ 360 370 380 390 400 >>gi|149034049|gb|EDL88832.1| synovial sarcoma transloca (402 aa) initn: 2743 init1: 2743 opt: 2743 Z-score: 2478.1 bits: 467.4 E(): 2.5e-129 Smith-Waterman score: 2743; 99.254% identity (100.000% similar) in 402 aa overlap (6-407:1-402) 10 20 30 40 50 60 mKIAA0 VRATTMSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPP 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 ASLMQGQIGNGPNHVSMQQTAQSTLPTTSMSLSGSGHGTGPGYSHSGPTSQSVPMQGQGA :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|149 ASLMQGQIGNGPNHVSMQQTAQSTLPTTSMSMSGSGHGTGPGYSHSGPTSQSVPMQGQGA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 ISNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ISNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 RPMAPYRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQ :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|149 RPMAPYRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHSDYAYQQSSYTEQ 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 SYDRSFEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SYDRSFEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQ 300 310 320 330 340 350 370 380 390 400 mKIAA0 GAPSQYSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ :::::::.::::::::::::::::::::::::::::::::::::::: gi|149 GAPSQYSGYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ 360 370 380 390 400 >>gi|148675360|gb|EDL07307.1| synovial sarcoma transloca (395 aa) initn: 2698 init1: 2698 opt: 2698 Z-score: 2437.7 bits: 459.9 E(): 4.5e-127 Smith-Waterman score: 2698; 100.000% identity (100.000% similar) in 394 aa overlap (6-399:1-394) 10 20 30 40 50 60 mKIAA0 VRATTMSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPP 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 ASLMQGQIGNGPNHVSMQQTAQSTLPTTSMSLSGSGHGTGPGYSHSGPTSQSVPMQGQGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ASLMQGQIGNGPNHVSMQQTAQSTLPTTSMSLSGSGHGTGPGYSHSGPTSQSVPMQGQGA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 ISNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ISNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 RPMAPYRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RPMAPYRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQ 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 SYDRSFEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SYDRSFEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQ 300 310 320 330 340 350 370 380 390 400 mKIAA0 GAPSQYSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ ::::::::::::::::::::::::::::::::::::::: gi|148 GAPSQYSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQA 360 370 380 390 >>gi|14516833|gb|AAK53461.1| calcium-responsive transcri (401 aa) initn: 1502 init1: 1343 opt: 2541 Z-score: 2296.5 bits: 433.8 E(): 3.3e-119 Smith-Waterman score: 2541; 93.284% identity (96.269% similar) in 402 aa overlap (6-407:1-401) 10 20 30 40 50 60 mKIAA0 VRATTMSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPP 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 ASLMQGQIGNGPNHVSMQQTAQSTLPTTSMSLSGSGHGTGPGYSHSGPTSQSVPMQGQGA :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|145 ASLMQGQIGNGPNHVSMQQTAQSTLPTTSMSMSGSGHGTGPGYSHSGPTSQSVPMQGQGA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 ISNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQ ::::::::::::::::::::::::: .. . .. ... :. : : :::::::: gi|145 ISNYVSRTNINMQSNPVSMMHQQAARPTTTQRRVEASITRARRPL-HDGPGWQGGSMMGQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 RPMAPYRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQ :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|145 RPMAPYRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHSDYAYQQSSYTEQ 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 SYDRSFEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 SYDRSFEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQ 300 310 320 330 340 350 370 380 390 400 mKIAA0 GAPSQYSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ :::::::.::::::::::::::::::::::::::::::::::::::: gi|145 GAPSQYSGYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ 360 370 380 390 400 >>gi|115304721|gb|AAI23449.1| Synovial sarcoma transloca (402 aa) initn: 2305 init1: 2305 opt: 2520 Z-score: 2277.6 bits: 430.3 E(): 3.7e-118 Smith-Waterman score: 2520; 89.826% identity (98.759% similar) in 403 aa overlap (6-407:1-402) 10 20 30 40 50 60 mKIAA0 VRATTMSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPP ::::::::::::::::::::::::::.:.::::.::::::.:::: ::::::....:::: gi|115 RNLVYLATIADSNQNMQSLLPAPPTQSMTLGPGGLSQSGSAQGLHSQGSLSDAIGAGLPP 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 ASLMQGQIGNGPNHVSMQQTAQSTLPTTSMSLSGSGHGTGPGYSHSGPTSQSVPMQGQGA .::::.::::::::::.::::::::::::::.::::::.:::::::::.:::::.:.::: gi|115 SSLMQAQIGNGPNHVSLQQTAQSTLPTTSMSMSGSGHGSGPGYSHSGPASQSVPLQSQGA 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 ISNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQ :::::::.:::::::::::::::::.:::..:::::::::::. .:::::.::::..::: gi|115 ISNYVSRANINMQSNPVSMMHQQAASSHYSAAQGGSQHYQGQS-MAMMGQSGQGGGVMGQ 180 190 200 210 220 230 250 260 270 280 290 mKIAA0 RPMAPYRPSQQGSSQQYLGQEEYYS-EQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTE ::::::::::::::::::::::::. :::.:.:...:::::::::::::::::: .:::. gi|115 RPMAPYRPSQQGSSQQYLGQEEYYGGEQYGHGQAASEPMSQQYYPDGHGDYAYQPASYTD 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA0 QSYDRSFEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPA ::::::::: ::::::::::::::::.::::::::::::::::::::::::::::::::: gi|115 QSYDRSFEDSTQHYYEGGNSQYSQQQTGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPA 300 310 320 330 340 350 360 370 380 390 400 mKIAA0 QGAPSQYSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ ::::::::::::::::::::::.::::::.:::::::::::::::::: gi|115 QGAPSQYSSYQQGQGQQYGSYRASQTGPSTQQQRPYGYEQGQYGNYQQ 360 370 380 390 400 >>gi|126302735|ref|XP_001368343.1| PREDICTED: hypothetic (402 aa) initn: 2504 init1: 2504 opt: 2504 Z-score: 2263.2 bits: 427.7 E(): 2.4e-117 Smith-Waterman score: 2504; 88.806% identity (98.259% similar) in 402 aa overlap (6-407:1-402) 10 20 30 40 50 60 mKIAA0 VRATTMSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH :::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|126 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILH 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPP :::::::::::::::::::::::::::::::::.. ::::::..: :..:::...::::: gi|126 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGGMPQSGSSQSIHSQSNLSDAIGTGLPP 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 ASLMQGQIGNGPNHVSMQQTAQSTLPTTSMSLSGSGHGTGPGYSHSGPTSQSVPMQGQGA .::::.::.::::::::::..:.:.::::::.. :.:::::::::. :.::.:::::::. gi|126 SSLMQSQISNGPNHVSMQQSGQNTMPTTSMSMTVSSHGTGPGYSHTVPASQNVPMQGQGS 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 ISNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQ :.::::::::::::::::::::::::::::::::::::::::. ::::.:..::.::::: gi|126 IGNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQSSIAMMSQSNQGSSMMGQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 RPMAPYRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQ :::.:::::::::::::.::::::::::::.::..:::.::::::::::::::::::::: gi|126 RPMGPYRPSQQGSSQQYMGQEEYYSEQYSHGQGTSEPMNQQYYPDGHGDYAYQQSSYTEQ 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 SYDRSFEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQ :::::::: ::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|126 SYDRSFEDSTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPNQQSYPGQQQGYGPAQ 300 310 320 330 340 350 370 380 390 400 mKIAA0 GAPSQYSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ :: ::::::::::::::::::.::::::::::::::::::::::::: gi|126 GASSQYSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ 360 370 380 390 400 >>gi|20139981|sp|O75177.2|S18L1_HUMAN RecName: Full=SS18 (396 aa) initn: 1591 init1: 1591 opt: 2484 Z-score: 2245.3 bits: 424.3 E(): 2.3e-116 Smith-Waterman score: 2484; 89.801% identity (96.766% similar) in 402 aa overlap (6-407:1-396) 10 20 30 40 50 60 mKIAA0 VRATTMSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH ::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|201 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILH 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPP :::::::::::::::::::::::::::::::::::.::::::::: ::::::..:::::: gi|201 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPP 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 ASLMQGQIGNGPNHVSMQQTAQSTLPTTSMSLSGSGHGTGPGYSHSGPTSQSVPMQGQGA .::.::::::::.:::::::: .::::::::.:: :::::.::.::.:::::::. gi|201 SSLLQGQIGNGPSHVSMQQTAPNTLPTTSMSISG------PGYSHAGPASQGVPMQGQGT 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 ISNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQ :.::::::::::::::::::.::::::::.::::::::::::. :::::::.::.::::: gi|201 IGNYVSRTNINMQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQ 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 RPMAPYRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQ ::::::::::::::::::::::::.::::::::.::::.::::::::::::::::::::: gi|201 RPMAPYRPSQQGSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQ 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 SYDRSFEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQ :::::::. ::::::::::::::::::::::.::::::::::::.:::::::::::: :: gi|201 SYDRSFEESTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQ 290 300 310 320 330 340 370 380 390 400 mKIAA0 GAPSQYSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ :::::: .:::::::::::::. ::.::::::::::::::::::::: gi|201 GAPSQYPGYQQGQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ 350 360 370 380 390 >>gi|158256402|dbj|BAF84174.1| unnamed protein product [ (396 aa) initn: 1591 init1: 1591 opt: 2481 Z-score: 2242.6 bits: 423.8 E(): 3.3e-116 Smith-Waterman score: 2481; 89.552% identity (96.766% similar) in 402 aa overlap (6-407:1-396) 10 20 30 40 50 60 mKIAA0 VRATTMSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILH ::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|158 MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILH 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQGLHPQGSLSDTVSTGLPP :::::::::::::::::::::::::::::::::::.::::::::: ::::::..:::::: gi|158 RNLVYLATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPP 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 ASLMQGQIGNGPNHVSMQQTAQSTLPTTSMSLSGSGHGTGPGYSHSGPTSQSVPMQGQGA .::.::::::::.:::::::: ..:::::::.:: :::::.::.::.:::::::. gi|158 SSLLQGQIGNGPSHVSMQQTAPNSLPTTSMSISG------PGYSHAGPASQGVPMQGQGT 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 ISNYVSRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQAPIAMMGQGGQGGSMMGQ :.::::::::::::::::::.::::::::.::::::::::::. :::::::.::.::::: gi|158 IGNYVSRTNINMQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQ 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 RPMAPYRPSQQGSSQQYLGQEEYYSEQYSHSQGSAEPMSQQYYPDGHGDYAYQQSSYTEQ ::::::::::::::::::::::::.::::::::.::::.::::::::::::::::::::: gi|158 RPMAPYRPSQQGSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQ 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 SYDRSFEDPTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQ :::::::. ::::::::::::::::::::::.::::::::::::.:::::::::::: :: gi|158 SYDRSFEESTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQ 290 300 310 320 330 340 370 380 390 400 mKIAA0 GAPSQYSSYQQGQGQQYGSYRTSQTGPSAQQQRPYGYEQGQYGNYQQ :::::: .:::::::::::::. ::.::::::::::::::::::::: gi|158 GAPSQYPGYQQGQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ 350 360 370 380 390 407 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 22:39:23 2009 done: Sun Mar 15 22:45:42 2009 Total Scan time: 862.360 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]