# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj08299.fasta.nr -Q ../query/mKIAA4077.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4077, 358 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920257 sequences Expectation_n fit: rho(ln(x))= 5.0669+/-0.000185; mu= 11.1505+/- 0.010 mean_var=77.9808+/-15.055, 0's: 39 Z-trim: 46 B-trim: 84 in 1/65 Lambda= 0.145238 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|149017087|gb|EDL76138.1| similar to hypothetica ( 417) 2304 492.0 9e-137 gi|109506377|ref|XP_214609.4| PREDICTED: similar t ( 439) 2304 492.1 9.3e-137 gi|148664582|gb|EDK96998.1| cDNA sequence BC021395 ( 337) 2172 464.3 1.6e-128 gi|81879344|sp|Q8VDS4.1|RPR1A_MOUSE RecName: Full= ( 312) 2011 430.5 2.2e-118 gi|109507051|ref|XP_001056597.1| PREDICTED: simila ( 312) 2006 429.5 4.5e-118 gi|74717048|sp|Q96P16.1|RPR1A_HUMAN RecName: Full= ( 312) 1988 425.7 6.2e-117 gi|109121966|ref|XP_001105423.1| PREDICTED: simila ( 312) 1984 424.9 1.1e-116 gi|7022824|dbj|BAA91736.1| unnamed protein product ( 312) 1983 424.7 1.3e-116 gi|149720890|ref|XP_001497139.1| PREDICTED: simila ( 312) 1978 423.6 2.6e-116 gi|114672845|ref|XP_001136630.1| PREDICTED: hypoth ( 316) 1970 422.0 8.5e-116 gi|73961249|ref|XP_866582.1| PREDICTED: similar to ( 318) 1956 419.0 6.5e-115 gi|126320792|ref|XP_001362782.1| PREDICTED: simila ( 312) 1935 414.6 1.4e-113 gi|73961255|ref|XP_866615.1| PREDICTED: similar to ( 318) 1932 414.0 2.1e-113 gi|224045868|ref|XP_002186945.1| PREDICTED: Regula ( 311) 1837 394.1 2.1e-107 gi|119621775|gb|EAX01370.1| hypothetical protein F ( 270) 1674 359.9 3.6e-97 gi|112362294|gb|AAI19945.1| Regulation of nuclear ( 270) 1674 359.9 3.6e-97 gi|14603356|gb|AAH10136.1| RPRD1A protein [Homo sa ( 289) 1674 359.9 3.7e-97 gi|32949299|gb|AAH00225.2| RPRD1A protein [Homo sa ( 276) 1664 357.8 1.5e-96 gi|82082800|sp|Q5ZM30.1|RPR1A_CHICK RecName: Full= ( 268) 1542 332.2 7.5e-89 gi|68378933|ref|XP_689055.1| PREDICTED: similar to ( 312) 1492 321.8 1.2e-85 gi|109092093|ref|XP_001090633.1| PREDICTED: simila ( 314) 1390 300.4 3.3e-79 gi|114681964|ref|XP_001143572.1| PREDICTED: simila ( 314) 1384 299.2 7.8e-79 gi|47216126|emb|CAG10000.1| unnamed protein produc ( 300) 1252 271.5 1.6e-70 gi|73961251|ref|XP_866593.1| PREDICTED: similar to ( 324) 1135 247.0 4.1e-63 gi|198420399|ref|XP_002130501.1| PREDICTED: simila ( 312) 1129 245.7 9.4e-63 gi|73961257|ref|XP_866628.1| PREDICTED: similar to ( 335) 1053 229.8 6.2e-58 gi|215501099|gb|EEC10593.1| conserved hypothetical ( 309) 1038 226.7 5.1e-57 gi|114681958|ref|XP_001143646.1| PREDICTED: simila ( 306) 1007 220.2 4.6e-55 gi|190589765|gb|EDV29787.1| hypothetical protein T ( 319) 895 196.7 5.5e-48 gi|49904129|gb|AAH76849.1| MGC83935 protein [Xenop ( 325) 739 164.0 3.9e-38 gi|126291300|ref|XP_001372083.1| PREDICTED: simila ( 326) 736 163.4 6e-38 gi|32450408|gb|AAH54350.1| Regulation of nuclear p ( 325) 735 163.2 6.9e-38 gi|23813892|sp|Q9CSU0.2|RPR1B_MOUSE RecName: Full= ( 326) 735 163.2 6.9e-38 gi|148674305|gb|EDL06252.1| RIKEN cDNA 2610304G08, ( 347) 735 163.2 7.2e-38 gi|148674304|gb|EDL06251.1| RIKEN cDNA 2610304G08, ( 358) 735 163.2 7.4e-38 gi|224078147|ref|XP_002192360.1| PREDICTED: Regula ( 386) 735 163.3 7.8e-38 gi|56972159|gb|AAH88745.1| LOC496291 protein [Xeno ( 320) 733 162.8 9.1e-38 gi|119596452|gb|EAW76046.1| chromosome 20 open rea ( 218) 731 162.2 9.2e-38 gi|115292097|gb|AAI22499.1| LOC496291 protein [Xen ( 325) 733 162.8 9.2e-38 gi|21708061|gb|AAH33629.1| Regulation of nuclear p ( 326) 731 162.4 1.2e-37 gi|23813907|sp|Q9NQG5.1|RPR1B_HUMAN RecName: Full= ( 326) 731 162.4 1.2e-37 gi|73992404|ref|XP_542990.2| PREDICTED: similar to ( 477) 731 162.5 1.6e-37 gi|49250390|gb|AAH74536.1| MGC69286 protein [Xenop ( 325) 729 161.9 1.7e-37 gi|60098379|emb|CAH65020.1| hypothetical protein [ ( 325) 727 161.5 2.2e-37 gi|74188715|dbj|BAE28092.1| unnamed protein produc ( 325) 724 160.9 3.4e-37 gi|29124544|gb|AAH48885.1| Regulation of nuclear p ( 335) 718 159.6 8.3e-37 gi|123233655|emb|CAM27269.1| regulation of nuclear ( 197) 686 152.7 5.9e-35 gi|223648950|gb|ACN11233.1| C20orf77 [Salmo salar] ( 331) 685 152.7 1e-34 gi|123297010|emb|CAM23181.1| regulation of nuclear ( 294) 665 148.5 1.7e-33 gi|74212442|dbj|BAE30966.1| unnamed protein produc ( 294) 660 147.4 3.4e-33 >>gi|149017087|gb|EDL76138.1| similar to hypothetical pr (417 aa) initn: 2304 init1: 2304 opt: 2304 Z-score: 2611.8 bits: 492.0 E(): 9e-137 Smith-Waterman score: 2304; 99.162% identity (99.721% similar) in 358 aa overlap (1-358:60-417) 10 20 30 mKIAA4 PASDSGVVVVRAWGRVGCGGEAATRAATLS :::::::::::::::::::::::::::::: gi|149 GGSFPRESSARGRARCVTSLPAGRHLARLRPASDSGVVVVRAWGRVGCGGEAATRAATLS 30 40 50 60 70 80 40 50 60 70 80 90 mKIAA4 SPRLHGVGRRERGSGGMSAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVW ::.:::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|149 SPQLHGVGRRERGFGGMSAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVW 90 100 110 120 130 140 100 110 120 130 140 150 mKIAA4 ERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHL 150 160 170 180 190 200 160 170 180 190 200 210 mKIAA4 GRVLSIWEERSVYENDVLEQLKHALYGDKKARKRTYEQIKVDENENCSSLGSPSEPPQTL ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|149 GRVLSIWEERSVYENDVLEQLKHALYGDKKTRKRTYEQIKVDENENCSSLGSPSEPPQTL 210 220 230 240 250 260 220 230 240 250 260 270 mKIAA4 DLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLEKITDKESGERLSKMVEDACMLLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLEKITDKESGERLSKMVEDACMLLA 270 280 290 300 310 320 280 290 300 310 320 330 mKIAA4 DYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRARIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRARIQ 330 340 350 360 370 380 340 350 mKIAA4 SLPDLSRLPNVTGSHMHLPFAGDIYSED :::::::::::::::::::::::::::: gi|149 SLPDLSRLPNVTGSHMHLPFAGDIYSED 390 400 410 >>gi|109506377|ref|XP_214609.4| PREDICTED: similar to cD (439 aa) initn: 2304 init1: 2304 opt: 2304 Z-score: 2611.5 bits: 492.1 E(): 9.3e-137 Smith-Waterman score: 2304; 99.162% identity (99.721% similar) in 358 aa overlap (1-358:82-439) 10 20 30 mKIAA4 PASDSGVVVVRAWGRVGCGGEAATRAATLS :::::::::::::::::::::::::::::: gi|109 GGSFPRESSARGRARCVTSLPAGRHLARLRPASDSGVVVVRAWGRVGCGGEAATRAATLS 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA4 SPRLHGVGRRERGSGGMSAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVW ::.:::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|109 SPQLHGVGRRERGFGGMSAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVW 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA4 ERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHL 180 190 200 210 220 230 160 170 180 190 200 210 mKIAA4 GRVLSIWEERSVYENDVLEQLKHALYGDKKARKRTYEQIKVDENENCSSLGSPSEPPQTL ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|109 GRVLSIWEERSVYENDVLEQLKHALYGDKKTRKRTYEQIKVDENENCSSLGSPSEPPQTL 240 250 260 270 280 290 220 230 240 250 260 270 mKIAA4 DLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLEKITDKESGERLSKMVEDACMLLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLEKITDKESGERLSKMVEDACMLLA 300 310 320 330 340 350 280 290 300 310 320 330 mKIAA4 DYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRARIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRARIQ 360 370 380 390 400 410 340 350 mKIAA4 SLPDLSRLPNVTGSHMHLPFAGDIYSED :::::::::::::::::::::::::::: gi|109 SLPDLSRLPNVTGSHMHLPFAGDIYSED 420 430 >>gi|148664582|gb|EDK96998.1| cDNA sequence BC021395, is (337 aa) initn: 2172 init1: 2172 opt: 2172 Z-score: 2463.6 bits: 464.3 E(): 1.6e-128 Smith-Waterman score: 2172; 100.000% identity (100.000% similar) in 337 aa overlap (22-358:1-337) 10 20 30 40 50 60 mKIAA4 PASDSGVVVVRAWGRVGCGGEAATRAATLSSPRLHGVGRRERGSGGMSAFSEAALEKKLS ::::::::::::::::::::::::::::::::::::::: gi|148 AATRAATLSSPRLHGVGRRERGSGGMSAFSEAALEKKLS 10 20 30 70 80 90 100 110 120 mKIAA4 ELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKG 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA4 PEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKHALYGDKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKHALYGDKK 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA4 ARKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ARKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEV 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA4 QEVSLLEKITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QEVSLLEKITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEA 220 230 240 250 260 270 310 320 330 340 350 mKIAA4 LAEKEHKLEEYKRKLARVSLVRKELRARIQSLPDLSRLPNVTGSHMHLPFAGDIYSED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LAEKEHKLEEYKRKLARVSLVRKELRARIQSLPDLSRLPNVTGSHMHLPFAGDIYSED 280 290 300 310 320 330 >>gi|81879344|sp|Q8VDS4.1|RPR1A_MOUSE RecName: Full=Regu (312 aa) initn: 2011 init1: 2011 opt: 2011 Z-score: 2281.7 bits: 430.5 E(): 2.2e-118 Smith-Waterman score: 2011; 100.000% identity (100.000% similar) in 312 aa overlap (47-358:1-312) 20 30 40 50 60 70 mKIAA4 GCGGEAATRAATLSSPRLHGVGRRERGSGGMSAFSEAALEKKLSELSNSQQSVQTLSLWL :::::::::::::::::::::::::::::: gi|818 MSAFSEAALEKKLSELSNSQQSVQTLSLWL 10 20 30 80 90 100 110 120 130 mKIAA4 IHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 IHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFK 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 HVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKHALYGDKKARKRTYEQIKVDENEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 HVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKHALYGDKKARKRTYEQIKVDENEN 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 CSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLEKITDKESGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 CSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLEKITDKESGE 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA4 RLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 RLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLA 220 230 240 250 260 270 320 330 340 350 mKIAA4 RVSLVRKELRARIQSLPDLSRLPNVTGSHMHLPFAGDIYSED :::::::::::::::::::::::::::::::::::::::::: gi|818 RVSLVRKELRARIQSLPDLSRLPNVTGSHMHLPFAGDIYSED 280 290 300 310 >>gi|109507051|ref|XP_001056597.1| PREDICTED: similar to (312 aa) initn: 2006 init1: 2006 opt: 2006 Z-score: 2276.0 bits: 429.5 E(): 4.5e-118 Smith-Waterman score: 2006; 99.679% identity (100.000% similar) in 312 aa overlap (47-358:1-312) 20 30 40 50 60 70 mKIAA4 GCGGEAATRAATLSSPRLHGVGRRERGSGGMSAFSEAALEKKLSELSNSQQSVQTLSLWL :::::::::::::::::::::::::::::: gi|109 MSAFSEAALEKKLSELSNSQQSVQTLSLWL 10 20 30 80 90 100 110 120 130 mKIAA4 IHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFK 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 HVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKHALYGDKKARKRTYEQIKVDENEN ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|109 HVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKHALYGDKKTRKRTYEQIKVDENEN 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 CSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLEKITDKESGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLEKITDKESGE 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA4 RLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLA 220 230 240 250 260 270 320 330 340 350 mKIAA4 RVSLVRKELRARIQSLPDLSRLPNVTGSHMHLPFAGDIYSED :::::::::::::::::::::::::::::::::::::::::: gi|109 RVSLVRKELRARIQSLPDLSRLPNVTGSHMHLPFAGDIYSED 280 290 300 310 >>gi|74717048|sp|Q96P16.1|RPR1A_HUMAN RecName: Full=Regu (312 aa) initn: 1988 init1: 1988 opt: 1988 Z-score: 2255.7 bits: 425.7 E(): 6.2e-117 Smith-Waterman score: 1988; 98.718% identity (99.679% similar) in 312 aa overlap (47-358:1-312) 20 30 40 50 60 70 mKIAA4 GCGGEAATRAATLSSPRLHGVGRRERGSGGMSAFSEAALEKKLSELSNSQQSVQTLSLWL :::::::::::::::::::::::::::::: gi|747 MSAFSEAALEKKLSELSNSQQSVQTLSLWL 10 20 30 80 90 100 110 120 130 mKIAA4 IHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 IHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFK 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 HVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKHALYGDKKARKRTYEQIKVDENEN ::::::::::::::::::::::::::::::::::::.::::::: ::::::::::::::: gi|747 HVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKQALYGDKKPRKRTYEQIKVDENEN 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 CSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLEKITDKESGE ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|747 CSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLDKITDKESGE 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA4 RLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 RLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLA 220 230 240 250 260 270 320 330 340 350 mKIAA4 RVSLVRKELRARIQSLPDLSRLPNVTGSHMHLPFAGDIYSED ::::::::::.::::::::::::::::::::::::::::::: gi|747 RVSLVRKELRSRIQSLPDLSRLPNVTGSHMHLPFAGDIYSED 280 290 300 310 >>gi|109121966|ref|XP_001105423.1| PREDICTED: similar to (312 aa) initn: 1984 init1: 1984 opt: 1984 Z-score: 2251.1 bits: 424.9 E(): 1.1e-116 Smith-Waterman score: 1984; 98.397% identity (99.679% similar) in 312 aa overlap (47-358:1-312) 20 30 40 50 60 70 mKIAA4 GCGGEAATRAATLSSPRLHGVGRRERGSGGMSAFSEAALEKKLSELSNSQQSVQTLSLWL :::::::::::::::::::::::::::::: gi|109 MSAFSEAALEKKLSELSNSQQSVQTLSLWL 10 20 30 80 90 100 110 120 130 mKIAA4 IHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFK 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 HVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKHALYGDKKARKRTYEQIKVDENEN ::::::::::::::::::::::::::::::::::::.::::::: ::::::::::::::: gi|109 HVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKQALYGDKKPRKRTYEQIKVDENEN 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 CSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLEKITDKESGE ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|109 CSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLDKITDKESGE 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA4 RLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLA 220 230 240 250 260 270 320 330 340 350 mKIAA4 RVSLVRKELRARIQSLPDLSRLPNVTGSHMHLPFAGDIYSED ::::::::::.:::.::::::::::::::::::::::::::: gi|109 RVSLVRKELRSRIQNLPDLSRLPNVTGSHMHLPFAGDIYSED 280 290 300 310 >>gi|7022824|dbj|BAA91736.1| unnamed protein product [Ho (312 aa) initn: 1983 init1: 1983 opt: 1983 Z-score: 2250.0 bits: 424.7 E(): 1.3e-116 Smith-Waterman score: 1983; 98.077% identity (99.679% similar) in 312 aa overlap (47-358:1-312) 20 30 40 50 60 70 mKIAA4 GCGGEAATRAATLSSPRLHGVGRRERGSGGMSAFSEAALEKKLSELSNSQQSVQTLSLWL :::::::::::::::::::::::::::::: gi|702 MSAFSEAALEKKLSELSNSQQSVQTLSLWL 10 20 30 80 90 100 110 120 130 mKIAA4 IHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|702 IHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFK 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 HVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKHALYGDKKARKRTYEQIKVDENEN ::::::::::::::::::::::::::::::::::::.::::::: ::::::::::::::: gi|702 HVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKQALYGDKKPRKRTYEQIKVDENEN 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 CSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLEKITDKESGE ::::::::::::::::::::::::::::::::::::::::::.:::::::.::::::::: gi|702 CSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVDVQEVSLLDKITDKESGE 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA4 RLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLA :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|702 RLSKMVEDACMLLADYNGRLAAEVDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLA 220 230 240 250 260 270 320 330 340 350 mKIAA4 RVSLVRKELRARIQSLPDLSRLPNVTGSHMHLPFAGDIYSED ::::::::::.::::::::::::::::::::::::::::::: gi|702 RVSLVRKELRSRIQSLPDLSRLPNVTGSHMHLPFAGDIYSED 280 290 300 310 >>gi|149720890|ref|XP_001497139.1| PREDICTED: similar to (312 aa) initn: 1978 init1: 1978 opt: 1978 Z-score: 2244.3 bits: 423.6 E(): 2.6e-116 Smith-Waterman score: 1978; 98.397% identity (99.679% similar) in 312 aa overlap (47-358:1-312) 20 30 40 50 60 70 mKIAA4 GCGGEAATRAATLSSPRLHGVGRRERGSGGMSAFSEAALEKKLSELSNSQQSVQTLSLWL :::::::::::::::::::::::::::::: gi|149 MSAFSEAALEKKLSELSNSQQSVQTLSLWL 10 20 30 80 90 100 110 120 130 mKIAA4 IHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFK 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 HVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKHALYGDKKARKRTYEQIKVDENEN ::::::::::::::::::::::::::::::::::::.::::::: ::::::::::::::: gi|149 HVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKQALYGDKKPRKRTYEQIKVDENEN 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 CSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLEKITDKESGE :::::::::::::::::::::::::::::::::.::::::::::::::::.::::::::: gi|149 CSSLGSPSEPPQTLDLVRALQDLENAASGDAAVRQRIASLPVEVQEVSLLDKITDKESGE 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA4 RLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLA 220 230 240 250 260 270 320 330 340 350 mKIAA4 RVSLVRKELRARIQSLPDLSRLPNVTGSHMHLPFAGDIYSED ::::::::::.::::::::::::::::::::::::::::::: gi|149 RVSLVRKELRSRIQSLPDLSRLPNVTGSHMHLPFAGDIYSED 280 290 300 310 >>gi|114672845|ref|XP_001136630.1| PREDICTED: hypothetic (316 aa) initn: 1974 init1: 1047 opt: 1970 Z-score: 2235.2 bits: 422.0 E(): 8.5e-116 Smith-Waterman score: 1970; 97.468% identity (98.418% similar) in 316 aa overlap (47-358:1-316) 20 30 40 50 60 70 mKIAA4 GCGGEAATRAATLSSPRLHGVGRRERGSGGMSAFSEAALEKKLSELSNSQQSVQTLSLWL :::::::::::::::::::::::::::::: gi|114 MSAFSEAALEKKLSELSNSQQSVQTLSLWL 10 20 30 80 90 100 110 120 130 mKIAA4 IHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFK 40 50 60 70 80 90 140 150 160 170 180 190 mKIAA4 HVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKHALYGDKKARKRTYEQIKVDENEN ::::::::::::::::::::::::::::::::::::.::::::: ::::::::::::::: gi|114 HVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKQALYGDKKPRKRTYEQIKVDENEN 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA4 CSSLGSPSEPPQ----TLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLEKITDK :::::::::::: ::::::::::::::::::::::::::::::::::::::.::::: gi|114 CSSLGSPSEPPQHTLITLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLDKITDK 160 170 180 190 200 210 260 270 280 290 300 310 mKIAA4 ESGERLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ESGERLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYK 220 230 240 250 260 270 320 330 340 350 mKIAA4 RKLARVSLVRKELRARIQSLPDLSRLPNVTGSHMHLPFAGDIYSED ::::::::::::::.::::::::::::::::::::::::::::::: gi|114 RKLARVSLVRKELRSRIQSLPDLSRLPNVTGSHMHLPFAGDIYSED 280 290 300 310 358 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 09:59:16 2009 done: Tue Mar 17 10:05:23 2009 Total Scan time: 839.580 Total Display time: 0.070 Function used was FASTA [version 34.26.5 April 26, 2007]