FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0721.ptfa, 404 aa vs ./tmplib.26680 library 1768613 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.1939+/-0.00532; mu= 8.4661+/- 0.353 mean_var=139.2677+/-33.789, 0's: 0 Z-trim: 3 B-trim: 0 in 0/36 Lambda= 0.1087 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1750 ( 415 res) mfj01371 ( 415) 703 121 1.2e-28 mKIAA4132 ( 147 res) mpj01338 ( 147) 655 113 1.1e-26 >>mKIAA1750 ( 415 res) mfj01371 (415 aa) initn: 687 init1: 502 opt: 703 Z-score: 606.9 bits: 121.2 E(): 1.2e-28 Smith-Waterman score: 724; 38.701% identity (42.210% ungapped) in 385 aa overlap (19-392:37-400) 10 20 30 40 mKIAA0 GVEGNNELSLANTTTPSHASEDL--DLKQDQGLQEETDTVREMEAAGE :.:: : : :. . :.. . :: mKIAA1 SGTMSGRSRGRKSSRAKGRGKGRARARVRAAAEDAWHDEKPPQSPRLGEDSAAAQVQAG- 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 AGADGGASP----DSEHCGPELCFRVAENSCAAAARGLEDAPSPSKGGDAPSAPVAADDS .:.::: : . : : .: . :: ::: ::.:. : ..:. mKIAA1 -AAQGGAEPAELREEAACRLPLDCGLALRARAADERGLA-APDPDLERARSLAERLTSDT 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA0 SKNGCQLEGPHSPAKPKALEACGAVGLGSQQMPGPKKTKEMTTT-KCAISVATGKEGEAG : : : . :: . :. .:....:: : ..: . ....:: :. mKIAA1 SFVGTV--G--ALAKLRR----GSR-IGNRRVPGRKAPDTRSATGRGPQATVSGKPKMAS 130 140 150 160 170 170 180 190 200 210 mKIAA0 AAMQEKKGLQKEKKV----AGGGKEETRPRAPKINCMDSLEAIDQELSNVNAQADRAFLQ :.. . .:::. ::.:. : .. ::.::... .: ..:::::::.:. mKIAA1 AGLCAAAPVGEEKKMTEKHAGAGSPAT------VGSMDTLETVQLKLETMNAQADRAYLR 180 190 200 210 220 220 230 240 250 260 270 mKIAA0 LERKFGRMRRLHMQRRSFIIQNIPGFWVTAFRNHPQLSPMISGQDEDMMRYMINLEVEEL : ::::..: :..::...::.::::: ::.:::::: ... .:.... :. :::::: mKIAA1 LSRKFGQLRLHHLERRNLLIQSIPGFWGQAFQNHPQLSAFLNTKDKEVLSYLNRLEVEEL 230 240 250 260 270 280 280 290 300 310 320 330 mKIAA0 KQPRVGCKFKFIFQSNPYFRNEGLVKEYERRSSGRVVSLSTPIRWHRGQEPQAHIHRNRE :.: :.:: : ::::.:. :.::: ::.::: :.::.: :.. :. ..: : mKIAA1 GLARLGYKIKFYFGRNPYFQNKVLIKEYGCGPSGQVVSRSAPIQWLPGHDLQSLSKENPE 290 300 310 320 330 340 340 350 360 370 380 390 mKIAA0 GNTIPSFFNWFSDHSLLEFDRIAEIIKGELWSNPLQYYLMGDGPRRGVRVPPRQPVESPR .: :::.:::.:: .: :.:.:::. .:: :::::::... :: . ..: mKIAA1 NNG--SFFGWFSNHSSIESDKIVEIINEDLWPNPLQYYLISE-EARGEKGKEERPGPAKL 350 360 370 380 390 400 400 mKIAA0 SFRFQSG mKIAA1 SPAPAVRQPN 410 >>mKIAA4132 ( 147 res) mpj01338 (147 aa) initn: 380 init1: 380 opt: 655 Z-score: 571.7 bits: 113.2 E(): 1.1e-26 Smith-Waterman score: 655; 66.216% identity (67.123% ungapped) in 148 aa overlap (257-404:2-147) 230 240 250 260 270 280 mKIAA0 RLHMQRRSFIIQNIPGFWVTAFRNHPQLSPMISGQDEDMMRYMINLEVEELKQPRVGCKF :: :.: .:.::. .:::.::..:..:::: mKIAA4 AMIRGRDAEMLRYVTSLEVKELRHPKTGCKF 10 20 30 290 300 310 320 330 340 mKIAA0 KFIFQSNPYFRNEGLVKEYERRSSGRVVSLSTPIRWHRGQEPQAHIHRNREGNTIPSFFN ::.:. ::::::. .::::: ::::::::::::: :.::.:::. :.::.. : :::. mKIAA4 KFFFRRNPYFRNKLIVKEYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQD--LICSFFT 40 50 60 70 80 350 360 370 380 390 400 mKIAA0 WFSDHSLLEFDRIAEIIKGELWSNPLQYYLMGDGPRRGVRVPPRQPVESPRSFRFQSG ::::::: : :::::::: .:: ::::::: .: :: : : :.::: :: : :::: mKIAA4 WFSDHSLPESDRIAEIIKEDLWPNPLQYYLCREGIRRPRRRPIREPVEIPRPFGFQSG 90 100 110 120 130 140 404 residues in 1 query sequences 1768613 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:27:11 2006 done: Mon Mar 27 10:27:11 2006 Scan time: 0.600 Display time: 0.020 Function used was FASTA [version 3.4t11 Apr 17, 2002]