# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj08061.fasta.nr -Q ../query/mKIAA4183.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mKIAA4183, 270 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7920707 sequences
Expectation_n fit: rho(ln(x))= 4.6883+/-0.000186; mu= 11.9566+/- 0.010
mean_var=66.1829+/-13.060, 0's: 45 Z-trim: 54 B-trim: 879 in 1/65
Lambda= 0.157653
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|62089186|dbj|BAD93037.1| ring finger protein 13 ( 401) 1695 394.0 2.2e-107
gi|114603937|ref|XP_001143540.1| PREDICTED: ring f ( 558) 1695 394.1 2.8e-107
gi|56206848|emb|CAI24371.1| ring finger protein 13 ( 384) 1667 387.6 1.7e-105
gi|56749099|sp|Q8VEM1.1|GOLI_MOUSE RecName: Full=G ( 419) 1667 387.6 1.9e-105
gi|56748898|sp|Q6Y290.1|GOLI_RAT RecName: Full=Gol ( 419) 1667 387.6 1.9e-105
gi|6175860|gb|AAF05310.1|AF171875_1 g1-related zin ( 419) 1667 387.6 1.9e-105
gi|148743834|gb|AAI42201.1| RNF130 protein [Bos ta ( 419) 1653 384.4 1.7e-104
gi|119574158|gb|EAW53773.1| ring finger protein 13 ( 384) 1638 381.0 1.7e-103
gi|56749089|sp|Q86XS8.1|GOLI_HUMAN RecName: Full=G ( 419) 1638 381.0 1.8e-103
gi|32425763|gb|AAH17100.2| RNF130 protein [Homo sa ( 418) 1631 379.4 5.4e-103
gi|119574157|gb|EAW53772.1| ring finger protein 13 ( 425) 1624 377.8 1.7e-102
gi|119574159|gb|EAW53774.1| ring finger protein 13 ( 335) 1495 348.4 9.4e-94
gi|126291668|ref|XP_001381191.1| PREDICTED: simila ( 439) 1405 328.0 1.7e-87
gi|224067737|ref|XP_002195629.1| PREDICTED: ring f ( 422) 1251 293.0 5.7e-77
gi|118097501|ref|XP_414601.2| PREDICTED: similar t ( 425) 1221 286.2 6.5e-75
gi|159155407|gb|AAI54846.1| LOC100124963 protein [ ( 419) 1181 277.1 3.5e-72
gi|134024402|gb|AAI35902.1| LOC100124963 protein [ ( 424) 1181 277.1 3.5e-72
gi|90441842|gb|AAI14473.1| RNF130 protein [Homo sa ( 345) 1156 271.3 1.6e-70
gi|148701782|gb|EDL33729.1| ring finger protein 13 ( 302) 1122 263.5 3e-68
gi|148701781|gb|EDL33728.1| ring finger protein 13 ( 337) 1122 263.6 3.3e-68
gi|149633040|ref|XP_001507054.1| PREDICTED: simila ( 477) 1017 239.8 6.5e-61
gi|63101181|gb|AAH95880.1| Zgc:113271 [Danio rerio ( 392) 948 224.1 3e-56
gi|51896016|gb|AAH82267.1| RNF130 protein [Homo sa ( 141) 914 215.9 3e-54
gi|40850915|gb|AAH65244.1| RNF130 protein [Homo sa ( 306) 883 209.2 7e-52
gi|45384742|gb|AAS59414.1| goliath protein [Chinch ( 193) 876 207.4 1.5e-51
gi|47212021|emb|CAF95427.1| unnamed protein produc ( 351) 845 200.6 3.1e-49
gi|47204951|emb|CAF87712.1| unnamed protein produc ( 270) 836 198.4 1.1e-48
gi|47206945|emb|CAF90643.1| unnamed protein produc ( 435) 811 192.9 7.8e-47
gi|109507950|ref|XP_001067775.1| PREDICTED: simila ( 726) 799 190.4 7.5e-46
gi|134035026|sp|Q5DTZ6.2|RN150_MOUSE RecName: Full ( 437) 790 188.2 2.1e-45
gi|195540169|gb|AAI68034.1| Unknown (protein for M ( 427) 785 187.0 4.6e-45
gi|220678797|emb|CAX13393.1| novel protein similar ( 418) 783 186.6 6.2e-45
gi|47211328|emb|CAF96193.1| unnamed protein produc ( 426) 774 184.5 2.6e-44
gi|149698202|ref|XP_001502278.1| PREDICTED: ring f ( 439) 772 184.1 3.7e-44
gi|73983982|ref|XP_849454.1| PREDICTED: similar to ( 855) 774 184.8 4.4e-44
gi|134035025|sp|Q9ULK6.2|RN150_HUMAN RecName: Full ( 438) 764 182.2 1.3e-43
gi|82178031|sp|Q566M8.1|RN150_DANRE RecName: Full= ( 419) 754 180.0 6e-43
gi|224049298|ref|XP_002192304.1| PREDICTED: ring f ( 428) 710 170.0 6.3e-40
gi|7677054|gb|AAF67007.1|AF155650_1 goliath protei ( 276) 704 168.4 1.2e-39
gi|74353727|gb|AAI01993.1| RNF150 protein [Homo sa ( 314) 698 167.1 3.3e-39
gi|183986395|gb|AAI66595.1| LOC652955 protein [Rat ( 354) 680 163.1 6.2e-38
gi|149052428|gb|EDM04245.1| goliath, isoform CRA_b ( 241) 640 153.8 2.6e-35
gi|149052427|gb|EDM04244.1| goliath, isoform CRA_a ( 276) 640 153.9 2.8e-35
gi|119622225|gb|EAX01820.1| ring finger protein 14 ( 392) 578 139.9 6.4e-31
gi|119622223|gb|EAX01818.1| ring finger protein 14 ( 398) 578 139.9 6.5e-31
gi|109104010|ref|XP_001106945.1| PREDICTED: simila ( 400) 578 139.9 6.5e-31
gi|22760787|dbj|BAC11334.1| unnamed protein produc ( 400) 578 139.9 6.5e-31
gi|160332298|sp|Q8NC42.2|RN149_HUMAN RecName: Full ( 400) 578 139.9 6.5e-31
gi|119622224|gb|EAX01819.1| ring finger protein 14 ( 428) 578 139.9 6.9e-31
gi|22761039|dbj|BAC11430.1| unnamed protein produc ( 400) 576 139.5 9e-31
>>gi|62089186|dbj|BAD93037.1| ring finger protein 130 va (401 aa)
initn: 1684 init1: 1684 opt: 1695 Z-score: 2084.3 bits: 394.0 E(): 2.2e-107
Smith-Waterman score: 1695; 97.388% identity (98.881% similar) in 268 aa overlap (1-268:7-272)
10 20 30 40 50
mKIAA4 GPRAAAAAAAGGTMSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINV
:::::::: ::::: :.:::::::::::::::::::.::::::::::::::::
gi|620 APAPEPGPRAAAAA--GGTMSCAGRAGPARLAALALLTCSLWPARADNASQEYYTALINV
10 20 30 40 50
60 70 80 90 100 110
mKIAA4 TVQEPGRGTPLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNI
::::::::.:::::::::::::::::::::::::::::.:::::::::::::::::::::
gi|620 TVQEPGRGAPLTFRIDRGRYGLDSPKAEVRGQVLAPLPLHGVADHLGCDPQTRFFVPPNI
60 70 80 90 100 110
120 130 140 150 160 170
mKIAA4 KQWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|620 KQWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELR
120 130 140 150 160 170
180 190 200 210 220 230
mKIAA4 GKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|620 GKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKI
180 190 200 210 220 230
240 250 260 270
mKIAA4 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKVQ
::::::::::::::::::::::::::::::::::
gi|620 RYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILP
240 250 260 270 280 290
gi|620 CKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVAFDMERLTRTQAVNRRS
300 310 320 330 340 350
>>gi|114603937|ref|XP_001143540.1| PREDICTED: ring finge (558 aa)
initn: 1684 init1: 1684 opt: 1695 Z-score: 2082.4 bits: 394.1 E(): 2.8e-107
Smith-Waterman score: 1695; 97.388% identity (98.881% similar) in 268 aa overlap (1-268:129-394)
10 20 30
mKIAA4 GPRAAAAAAAGGTMSGAARAGPARLAALAL
:::::::: ::::: :.::::::::::::
gi|114 RRGPMGASPRAGSGREGGERRGRGAPAPEPGPRAAAAA--GGTMSCAGRAGPARLAALAL
100 110 120 130 140 150
40 50 60 70 80 90
mKIAA4 LTCSLWPTRADNASQEYYTALINVTVQEPGRGTPLTFRIDRGRYGLDSPKAEVRGQVLAP
:::::::.::::::::::::::::::::::::.:::::::::::::::::::::::::::
gi|114 LTCSLWPARADNASQEYYTALINVTVQEPGRGAPLTFRIDRGRYGLDSPKAEVRGQVLAP
160 170 180 190 200 210
100 110 120 130 140 150
mKIAA4 LPIHGVADHLGCDPQTRFFVPPNIKQWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKS
::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 LPLHGVADHLGCDPQTRFFVPPNIKQWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKS
220 230 240 250 260 270
160 170 180 190 200 210
mKIAA4 KEEPVTMTHPGTGDIIAVMITELRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 KEEPVTMTHPGTGDIIAVMITELRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVF
280 290 300 310 320 330
220 230 240 250 260 270
mKIAA4 VSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 VSISFIVLMIISSAWLIFYFIQKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKET
340 350 360 370 380 390
gi|114 DPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPN
400 410 420 430 440 450
>>gi|56206848|emb|CAI24371.1| ring finger protein 130 [M (384 aa)
initn: 1667 init1: 1667 opt: 1667 Z-score: 2050.1 bits: 387.6 E(): 1.7e-105
Smith-Waterman score: 1667; 100.000% identity (100.000% similar) in 255 aa overlap (14-268:1-255)
10 20 30 40 50 60
mKIAA4 GPRAAAAAAAGGTMSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINVTVQEPG
:::::::::::::::::::::::::::::::::::::::::::::::
gi|562 MSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINVTVQEPG
10 20 30 40
70 80 90 100 110 120
mKIAA4 RGTPLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIKQWIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|562 RGTPLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIKQWIAL
50 60 70 80 90 100
130 140 150 160 170 180
mKIAA4 LQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|562 LQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILS
110 120 130 140 150 160
190 200 210 220 230 240
mKIAA4 YLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|562 YLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNAR
170 180 190 200 210 220
250 260 270
mKIAA4 DRNQRRLGDAAKKAISKLTTRTVKKGDKVQ
::::::::::::::::::::::::::::
gi|562 DRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFH
230 240 250 260 270 280
>>gi|56749099|sp|Q8VEM1.1|GOLI_MOUSE RecName: Full=Golia (419 aa)
initn: 1667 init1: 1667 opt: 1667 Z-score: 2049.6 bits: 387.6 E(): 1.9e-105
Smith-Waterman score: 1667; 100.000% identity (100.000% similar) in 255 aa overlap (14-268:1-255)
10 20 30 40 50 60
mKIAA4 GPRAAAAAAAGGTMSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINVTVQEPG
:::::::::::::::::::::::::::::::::::::::::::::::
gi|567 MSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINVTVQEPG
10 20 30 40
70 80 90 100 110 120
mKIAA4 RGTPLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIKQWIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|567 RGTPLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIKQWIAL
50 60 70 80 90 100
130 140 150 160 170 180
mKIAA4 LQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|567 LQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILS
110 120 130 140 150 160
190 200 210 220 230 240
mKIAA4 YLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|567 YLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNAR
170 180 190 200 210 220
250 260 270
mKIAA4 DRNQRRLGDAAKKAISKLTTRTVKKGDKVQ
::::::::::::::::::::::::::::
gi|567 DRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFH
230 240 250 260 270 280
>>gi|56748898|sp|Q6Y290.1|GOLI_RAT RecName: Full=Goliath (419 aa)
initn: 1667 init1: 1667 opt: 1667 Z-score: 2049.6 bits: 387.6 E(): 1.9e-105
Smith-Waterman score: 1667; 100.000% identity (100.000% similar) in 255 aa overlap (14-268:1-255)
10 20 30 40 50 60
mKIAA4 GPRAAAAAAAGGTMSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINVTVQEPG
:::::::::::::::::::::::::::::::::::::::::::::::
gi|567 MSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINVTVQEPG
10 20 30 40
70 80 90 100 110 120
mKIAA4 RGTPLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIKQWIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|567 RGTPLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIKQWIAL
50 60 70 80 90 100
130 140 150 160 170 180
mKIAA4 LQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|567 LQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILS
110 120 130 140 150 160
190 200 210 220 230 240
mKIAA4 YLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|567 YLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNAR
170 180 190 200 210 220
250 260 270
mKIAA4 DRNQRRLGDAAKKAISKLTTRTVKKGDKVQ
::::::::::::::::::::::::::::
gi|567 DRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFH
230 240 250 260 270 280
>>gi|6175860|gb|AAF05310.1|AF171875_1 g1-related zinc fi (419 aa)
initn: 1667 init1: 1667 opt: 1667 Z-score: 2049.6 bits: 387.6 E(): 1.9e-105
Smith-Waterman score: 1667; 100.000% identity (100.000% similar) in 255 aa overlap (14-268:1-255)
10 20 30 40 50 60
mKIAA4 GPRAAAAAAAGGTMSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINVTVQEPG
:::::::::::::::::::::::::::::::::::::::::::::::
gi|617 MSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINVTVQEPG
10 20 30 40
70 80 90 100 110 120
mKIAA4 RGTPLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIKQWIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|617 RGTPLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIKQWIAL
50 60 70 80 90 100
130 140 150 160 170 180
mKIAA4 LQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|617 LQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILS
110 120 130 140 150 160
190 200 210 220 230 240
mKIAA4 YLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|617 YLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNAR
170 180 190 200 210 220
250 260 270
mKIAA4 DRNQRRLGDAAKKAISKLTTRTVKKGDKVQ
::::::::::::::::::::::::::::
gi|617 DRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFH
230 240 250 260 270 280
>>gi|148743834|gb|AAI42201.1| RNF130 protein [Bos taurus (419 aa)
initn: 1653 init1: 1653 opt: 1653 Z-score: 2032.4 bits: 384.4 E(): 1.7e-104
Smith-Waterman score: 1653; 98.824% identity (100.000% similar) in 255 aa overlap (14-268:1-255)
10 20 30 40 50 60
mKIAA4 GPRAAAAAAAGGTMSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINVTVQEPG
::::::::::::::.:::::::::.::::::::::::::::::::::
gi|148 MSGAARAGPARLAAFALLTCSLWPARADNASQEYYTALINVTVQEPG
10 20 30 40
70 80 90 100 110 120
mKIAA4 RGTPLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIKQWIAL
::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 RGAPLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIKQWIAL
50 60 70 80 90 100
130 140 150 160 170 180
mKIAA4 LQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 LQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILS
110 120 130 140 150 160
190 200 210 220 230 240
mKIAA4 YLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 YLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNAR
170 180 190 200 210 220
250 260 270
mKIAA4 DRNQRRLGDAAKKAISKLTTRTVKKGDKVQ
::::::::::::::::::::::::::::
gi|148 DRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFH
230 240 250 260 270 280
>>gi|119574158|gb|EAW53773.1| ring finger protein 130, i (384 aa)
initn: 1638 init1: 1638 opt: 1638 Z-score: 2014.5 bits: 381.0 E(): 1.7e-103
Smith-Waterman score: 1638; 98.039% identity (99.608% similar) in 255 aa overlap (14-268:1-255)
10 20 30 40 50 60
mKIAA4 GPRAAAAAAAGGTMSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINVTVQEPG
:: :.:::::::::::::::::::.::::::::::::::::::::::
gi|119 MSCAGRAGPARLAALALLTCSLWPARADNASQEYYTALINVTVQEPG
10 20 30 40
70 80 90 100 110 120
mKIAA4 RGTPLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIKQWIAL
::.:::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
gi|119 RGAPLTFRIDRGRYGLDSPKAEVRGQVLAPLPLHGVADHLGCDPQTRFFVPPNIKQWIAL
50 60 70 80 90 100
130 140 150 160 170 180
mKIAA4 LQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILS
110 120 130 140 150 160
190 200 210 220 230 240
mKIAA4 YLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 YLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNAR
170 180 190 200 210 220
250 260 270
mKIAA4 DRNQRRLGDAAKKAISKLTTRTVKKGDKVQ
::::::::::::::::::::::::::::
gi|119 DRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFH
230 240 250 260 270 280
>>gi|56749089|sp|Q86XS8.1|GOLI_HUMAN RecName: Full=Golia (419 aa)
initn: 1638 init1: 1638 opt: 1638 Z-score: 2014.0 bits: 381.0 E(): 1.8e-103
Smith-Waterman score: 1638; 98.039% identity (99.608% similar) in 255 aa overlap (14-268:1-255)
10 20 30 40 50 60
mKIAA4 GPRAAAAAAAGGTMSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINVTVQEPG
:: :.:::::::::::::::::::.::::::::::::::::::::::
gi|567 MSCAGRAGPARLAALALLTCSLWPARADNASQEYYTALINVTVQEPG
10 20 30 40
70 80 90 100 110 120
mKIAA4 RGTPLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIKQWIAL
::.:::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
gi|567 RGAPLTFRIDRGRYGLDSPKAEVRGQVLAPLPLHGVADHLGCDPQTRFFVPPNIKQWIAL
50 60 70 80 90 100
130 140 150 160 170 180
mKIAA4 LQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|567 LQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILS
110 120 130 140 150 160
190 200 210 220 230 240
mKIAA4 YLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|567 YLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNAR
170 180 190 200 210 220
250 260 270
mKIAA4 DRNQRRLGDAAKKAISKLTTRTVKKGDKVQ
::::::::::::::::::::::::::::
gi|567 DRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFH
230 240 250 260 270 280
>>gi|32425763|gb|AAH17100.2| RNF130 protein [Homo sapien (418 aa)
initn: 1631 init1: 1631 opt: 1631 Z-score: 2005.4 bits: 379.4 E(): 5.4e-103
Smith-Waterman score: 1631; 98.031% identity (99.606% similar) in 254 aa overlap (15-268:1-254)
10 20 30 40 50 60
mKIAA4 GPRAAAAAAAGGTMSGAARAGPARLAALALLTCSLWPTRADNASQEYYTALINVTVQEPG
: :.:::::::::::::::::::.::::::::::::::::::::::
gi|324 SCAGRAGPARLAALALLTCSLWPARADNASQEYYTALINVTVQEPG
10 20 30 40
70 80 90 100 110 120
mKIAA4 RGTPLTFRIDRGRYGLDSPKAEVRGQVLAPLPIHGVADHLGCDPQTRFFVPPNIKQWIAL
::.:::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
gi|324 RGAPLTFRIDRGRYGLDSPKAEVRGQVLAPLPLHGVADHLGCDPQTRFFVPPNIKQWIAL
50 60 70 80 90 100
130 140 150 160 170 180
mKIAA4 LQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|324 LQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILS
110 120 130 140 150 160
190 200 210 220 230 240
mKIAA4 YLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|324 YLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTNAR
170 180 190 200 210 220
250 260 270
mKIAA4 DRNQRRLGDAAKKAISKLTTRTVKKGDKVQ
::::::::::::::::::::::::::::
gi|324 DRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFH
230 240 250 260 270 280
270 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Tue Mar 17 23:34:08 2009 done: Tue Mar 17 23:39:35 2009
Total Scan time: 762.410 Total Display time: 0.050
Function used was FASTA [version 34.26.5 April 26, 2007]