FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mFLJ00205.ptfa, 634 aa vs ./tmplib.26680 library 1768383 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.8747+/-0.00448; mu= 15.8152+/- 0.300 mean_var=87.6037+/-19.740, 0's: 0 Z-trim: 1 B-trim: 0 in 0/36 Lambda= 0.1370 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1130 ( 655 res) mfj06002 ( 655) 1248 257 4.3e-69 >>mKIAA1130 ( 655 res) mfj06002 (655 aa) initn: 1255 init1: 408 opt: 1248 Z-score: 1332.7 bits: 256.8 E(): 4.3e-69 Smith-Waterman score: 1306; 37.580% identity (41.844% ungapped) in 628 aa overlap (11-623:77-655) 10 20 30 40 mFLJ00 RPLLLAELLPPPGGRADAQSRGRARRGGPAPMRRKEKRLL : .: .. . : .: . : ::. . mKIAA1 GQGQGSRVFAGDSGLSSPAQATTNGWGSKLPCSGSESTPASGPTRSARPPTMRKIRA--- 50 60 70 80 90 100 50 60 70 80 90 mFLJ00 QAVALALAALVLLPNVGLWALYRERQPDGSPGGLGAAVAPAAVQELH-SRQKKTFFLGAE .:.:. .: .: :: .: .: .: :: : . ..:. .: . :. mKIAA1 NAIAILTVAWILGTFYYLWQ--DNRAHAASSSGRGAQRAGGRPEQLREDRTIPLIVTGTP 110 120 130 140 150 160 100 110 120 130 140 150 mFLJ00 QRLKDWHNKEAIRRDAQRVGYGEQGKPYPMTDAERVDQAYRENGFNIYVSDKISLNRSLP .. : : .:... ::. :: :...:: :::.: .: . mKIAA1 SKGFD----EKAYLSAKQLKPGED--PY------------RQHAFNQLESDKLSSDRPIR 170 180 190 200 160 170 180 190 200 210 mFLJ00 DIRHPNCNSKLYLETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSD : :: .: : : :: ::.:: ::::. :.:::::.:::::.: :. ::.::::::. mKIAA1 DTRHYSCPSLSYSSDLPATSVIITFHNEARSTLLRTVKSVLNRTPASLIQEIILVDDFSS 210 220 230 240 250 260 220 230 240 250 260 270 mFLJ00 REHLKKPLEDYMAL--FPSVRILRTKKREGLIRTRMLGASAATGDVITFLDSHCEANVNW : :: . : .:.:. ::. :::::::.:. ::..: . :.::::::::.::.: mKIAA1 -----DP-EDCLLLTRIPKVKCLRNDKREGLIRSRVRGADVAGATVLTFLDSHCEVNVEW 270 280 290 300 310 280 290 300 310 320 330 mFLJ00 LPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYK--RIPIPPELQ : :.:.:. ... .: :.::::. :.: : . ..: .::.::: ...: .::. .. mKIAA1 LQPMLQRVMEDHTRVVSPIIDVISLDNFAYLAASAD-LRGGFDWSLHFKWEQIPLEQKMT 320 330 340 350 360 370 340 350 360 370 380 390 mFLJ00 KADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIP ..::. :...::.:::.:..:..:: .:: :: ..:::::..:.::.:::::: .: .: mKIAA1 RTDPTKPIRTPVIAGGIFVIDKSWFNHLGKYDAQMDIWGGENFELSFRVWMCGGSLEIVP 380 390 400 410 420 430 400 410 420 430 440 450 mFLJ00 CSRVGHIYRKYVPYKVPAGVSLA--RNLKRVAEVWMDEYAEYIYQRRPEYRHLSAGDVVA ::::::..:: ::. : : .:. :: ::.:::::::: .: :. :: . :.:.. mKIAA1 CSRVGHVFRKRHPYNFPEGNALTYIRNTKRTAEVWMDEYKQYYYEARPSAIGKAFGSVAT 440 450 460 470 480 490 460 470 480 490 500 510 mFLJ00 QKKLRVSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWG--EIRNVGTGLCTDTKLGTLG . . : ...::::.:.. .. .: : : . : ... : . : :: .: mKIAA1 RIEQRKKMDCKSFRWYLENVYPELTVPVKEVLPGVIKQGVNCLESQGQNTAGDLLLG-MG 500 510 520 530 540 550 520 530 540 550 560 mFLJ00 SPLRLETCIRGRGEAAWNSMQVFTFTWREDIRPGDPQHTKKFCFDAVSHT-----SPVTL : :: ... :.. :. . . : :. :.: ::: : mKIAA1 ------IC-RGSAKSP-PPAQAWLFSDHLIQQQGK-------CLAATSTLMSSPGSPVIL 560 570 580 590 600 570 580 590 600 610 620 mFLJ00 YDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSESDHRVFMNTCNPSSLTQQW-LFEHTNS :. .:.: :. :: . . : ::: :.. . . .. . :. .. .::: :. :: mKIAA1 QTCNPKEGKQKWR-RKGSFIQHSVSGLCLETKPA--QLVTSKCQTDAQAQQWQLLPHT 610 620 630 640 650 630 mFLJ00 TVLENFNKN 634 residues in 1 query sequences 1768383 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:08:06 2006 done: Mon Mar 27 10:08:07 2006 Scan time: 0.740 Display time: 0.040 Function used was FASTA [version 3.4t11 Apr 17, 2002]