Comparison of KIAA cDNA sequences between mouse and human (FLJ00205)

<<Original sequence data>>

mouse  mFLJ00205 (mfj07125)     length:   4672 bp, CDS:     3 -  1907
human     (sj04565)     length:   4188 bp, CDS:     2 -  1081

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:    116 -   116       1        0      0.0
  CDS:    117 -  1196     940      140      13.0
3'UTR:   1197 -  4713    1354     1777      56.8

amino acid

  CDS:    117 -  1196     334       26      7.2
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
mfj07125     1 CGCGGCCGCTACTGCTGGCCGAACTGCTGCCGCCGCCGGGTGGACGGGCG 50
                                                                 
sj04565      1 .................................................. 1

            51 ----+----*----+----*----+----*----+----*----+----* 100
mfj07125    51 GACGCGCAAAGCCGGGGGCGGGCGCGGCGGGGCGGACCGGCCCCGATGAG 100
                                                                 
sj04565      1 .................................................. 1

           101 ----+----*----+----*----+----*----+----*----+----* 150
                               L  L  Q  A  V  A  L  A  L  A  A  L
mfj07125   101 GCGCAAAGAGAAGCGGCTCTTGCAGGCGGTGGCTCTGGCTCTGGCGGCCC 150
                              |||| ||||||||||||| ||||  ||||||||||
sj04565      1 ...............GCTCCTGCAGGCGGTGGCGCTGGTGCTGGCGGCCC 35
                               L  L  Q  A  V  A  L  V  L  A  A  L

           151 ----+----*----+----*----+----*----+----*----+----* 200
                 V  L  L  P  N  V  G  L  W  A  L  Y  R  E  R  Q  
mfj07125   151 TGGTCCTGCTGCCCAACGTGGGGCTTTGGGCTCTGTACCGCGAGCGGCAG 200
               ||||||| ||||||||||||||||||||||| ||||||||||||||||||
sj04565     36 TGGTCCTCCTGCCCAACGTGGGGCTTTGGGCGCTGTACCGCGAGCGGCAG 85
                 V  L  L  P  N  V  G  L  W  A  L  Y  R  E  R  Q  

           201 ----+----*----+----*----+----*----+----*----+----* 250
               P  D  G  S  P  G  G  L  G  A  A  V  A  P  A  A  V 
mfj07125   201 CCCGACGGCAGCCCTGGGGGATTGGGGGCGGCGGTGGCCCCCGCGGCGGT 250
               |||||||||| ||||||||||| ||||||||||||||| || ||||||| 
sj04565     86 CCCGACGGCACCCCTGGGGGATCGGGGGCGGCGGTGGCGCCGGCGGCGGG 135
               P  D  G  T  P  G  G  S  G  A  A  V  A  P  A  A  G 

           251 ----+----*----+----*----+----*----+----*----+----* 300
                Q  E  L  H  S  R  Q  K  K  T  F  F  L  G  A  E  Q
mfj07125   251 TCAGGAATTACACAGTCGACAAAAAAAGACATTTTTCTTGGGAGCTGAAC 300
                ||||  | ||||||||||||||| || || ||||||||||||| ||  |
sj04565    136 ACAGGGCTCACACAGTCGACAAAAGAAAACGTTTTTCTTGGGAGATGGGC 185
                Q  G  S  H  S  R  Q  K  K  T  F  F  L  G  D  G  Q

           301 ----+----*----+----*----+----*----+----*----+----* 350
                 R  L  K  D  W  H  N  K  E  A  I  R  R  D  A  Q  
mfj07125   301 AAAGGCTGAAGGACTGGCATAACAAGGAGGCTATCAGGAGGGACGCACAG 350
               | | |||||||||||||||| |||||||||| ||| |||||||||| |||
sj04565    186 AGAAGCTGAAGGACTGGCATGACAAGGAGGCCATCCGGAGGGACGCTCAG 235
                 K  L  K  D  W  H  D  K  E  A  I  R  R  D  A  Q  

           351 ----+----*----+----*----+----*----+----*----+----* 400
               R  V  G  Y  G  E  Q  G  K  P  Y  P  M  T  D  A  E 
mfj07125   351 CGCGTAGGATATGGAGAACAGGGGAAGCCTTACCCCATGACCGATGCCGA 400
               ||||||||| |||||||||| || |  |||||||||||||||||||| ||
sj04565    236 CGCGTAGGAAATGGAGAACAAGGAAGACCTTACCCCATGACCGATGCTGA 285
               R  V  G  N  G  E  Q  G  R  P  Y  P  M  T  D  A  E 

           401 ----+----*----+----*----+----*----+----*----+----* 450
                R  V  D  Q  A  Y  R  E  N  G  F  N  I  Y  V  S  D
mfj07125   401 GAGAGTGGACCAGGCGTACCGGGAAAATGGATTTAACATCTACGTCAGTG 450
               ||||||||| ||||| ||||| ||||||||||||||||||||||||||||
sj04565    286 GAGAGTGGATCAGGCATACCGAGAAAATGGATTTAACATCTACGTCAGTG 335
                R  V  D  Q  A  Y  R  E  N  G  F  N  I  Y  V  S  D

           451 ----+----*----+----*----+----*----+----*----+----* 500
                 K  I  S  L  N  R  S  L  P  D  I  R  H  P  N  C  
mfj07125   451 ATAAAATCTCCCTGAATCGCTCTCTCCCCGATATCCGGCACCCAAACTGT 500
               ||||||||||| |||||||||||||||| |||||||||||||||||||| 
sj04565    336 ATAAAATCTCCTTGAATCGCTCTCTCCCAGATATCCGGCACCCAAACTGC 385
                 K  I  S  L  N  R  S  L  P  D  I  R  H  P  N  C  

           501 ----+----*----+----*----+----*----+----*----+----* 550
               N  S  K  L  Y  L  E  T  L  P  N  T  S  I  I  I  P 
mfj07125   501 AACAGCAAGCTCTACCTGGAGACGCTCCCCAACACCAGCATCATCATCCC 550
               |||||||||| |||||||||||| || |||||||| ||||||||||||||
sj04565    386 AACAGCAAGCGCTACCTGGAGACACTTCCCAACACAAGCATCATCATCCC 435
               N  S  K  R  Y  L  E  T  L  P  N  T  S  I  I  I  P 

           551 ----+----*----+----*----+----*----+----*----+----* 600
                F  H  N  E  G  W  S  S  L  L  R  T  V  H  S  V  L
mfj07125   551 CTTCCACAACGAGGGCTGGTCCTCACTGCTGCGCACTGTTCACAGCGTGC 600
               |||||||||||||||||||||||| || || ||||| || ||||| ||||
sj04565    436 CTTCCACAACGAGGGCTGGTCCTCCCTCCTCCGCACCGTCCACAGTGTGC 485
                F  H  N  E  G  W  S  S  L  L  R  T  V  H  S  V  L

           601 ----+----*----+----*----+----*----+----*----+----* 650
                 N  R  S  P  P  E  L  V  A  E  I  V  L  V  D  D  
mfj07125   601 TCAACCGCTCGCCCCCAGAGCTAGTGGCGGAGATTGTGTTGGTTGATGAC 650
               |||| |||||||| |||||||| || || ||||||||  |||| || |||
sj04565    486 TCAATCGCTCGCCTCCAGAGCTGGTCGCCGAGATTGTACTGGTCGACGAC 535
                 N  R  S  P  P  E  L  V  A  E  I  V  L  V  D  D  

           651 ----+----*----+----*----+----*----+----*----+----* 700
               F  S  D  R  E  H  L  K  K  P  L  E  D  Y  M  A  L 
mfj07125   651 TTCAGTGATCGAGAGCACCTGAAGAAGCCCCTGGAGGACTACATGGCCCT 700
               ||||||||||||||||||||||||||||| || || ||||||||||||||
sj04565    536 TTCAGTGATCGAGAGCACCTGAAGAAGCCTCTTGAAGACTACATGGCCCT 585
               F  S  D  R  E  H  L  K  K  P  L  E  D  Y  M  A  L 

           701 ----+----*----+----*----+----*----+----*----+----* 750
                F  P  S  V  R  I  L  R  T  K  K  R  E  G  L  I  R
mfj07125   701 TTTCCCCAGCGTGAGGATTCTCCGGACCAAGAAACGGGAAGGCCTGATAA 750
               ||||||||| ||||||||||| || ||||||||||||||||| |||||||
sj04565    586 TTTCCCCAGTGTGAGGATTCTTCGAACCAAGAAACGGGAAGGGCTGATAA 635
                F  P  S  V  R  I  L  R  T  K  K  R  E  G  L  I  R

           751 ----+----*----+----*----+----*----+----*----+----* 800
                 T  R  M  L  G  A  S  A  A  T  G  D  V  I  T  F  
mfj07125   751 GGACCCGAATGCTGGGGGCATCAGCCGCCACCGGAGATGTCATCACTTTC 800
               ||||||||||||||||||| ||||  || || || ||||||||||| |||
sj04565    636 GGACCCGAATGCTGGGGGCCTCAGTGGCAACTGGGGATGTCATCACATTC 685
                 T  R  M  L  G  A  S  V  A  T  G  D  V  I  T  F  

           801 ----+----*----+----*----+----*----+----*----+----* 850
               L  D  S  H  C  E  A  N  V  N  W  L  P  P  L  L  D 
mfj07125   801 TTAGATTCACACTGTGAAGCCAACGTCAACTGGCTCCCCCCTTTGCTTGA 850
               || |||||||||||||||||||| ||||||||||| ||||| ||||||||
sj04565    686 TTGGATTCACACTGTGAAGCCAATGTCAACTGGCTTCCCCCCTTGCTTGA 735
               L  D  S  H  C  E  A  N  V  N  W  L  P  P  L  L  D 

           851 ----+----*----+----*----+----*----+----*----+----* 900
                R  I  A  R  N  R  K  T  I  V  C  P  M  I  D  V  I
mfj07125   851 CCGCATTGCTCGGAACCGGAAGACCATCGTGTGCCCAATGATCGATGTCA 900
               |||||||||||||||||| |||||||| |||||||| ||||| ||||| |
sj04565    736 CCGCATTGCTCGGAACCGCAAGACCATTGTGTGCCCGATGATTGATGTAA 785
                R  I  A  R  N  R  K  T  I  V  C  P  M  I  D  V  I

           901 ----+----*----+----*----+----*----+----*----+----* 950
                 D  H  D  D  F  R  Y  E  T  Q  A  G  D  A  M  R  
mfj07125   901 TCGACCACGATGACTTCCGGTATGAGACTCAGGCTGGGGACGCCATGCGT 950
               | ||||| || ||||| ||||| ||||| ||||| ||||| |||||||| 
sj04565    786 TTGACCATGACGACTTTCGGTACGAGACACAGGCAGGGGATGCCATGCGG 835
                 D  H  D  D  F  R  Y  E  T  Q  A  G  D  A  M  R  

           951 ----+----*----+----*----+----*----+----*----+----* 1000
               G  A  F  D  W  E  M  Y  Y  K  R  I  P  I  P  P  E 
mfj07125   951 GGTGCCTTCGACTGGGAAATGTATTACAAACGGATCCCAATCCCTCCAGA 1000
               || ||||| |||||||| ||||| ||||| |||||||| |||||||||||
sj04565    836 GGAGCCTTTGACTGGGAGATGTACTACAAGCGGATCCCGATCCCTCCAGA 885
               G  A  F  D  W  E  M  Y  Y  K  R  I  P  I  P  P  E 

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
                L  Q  K  A  D  P  S  D  P  F  E  S  P  V  M  A  G
mfj07125  1001 ACTGCAGAAGGCTGACCCCAGTGACCCATTTGAGTCTCCCGTGATGGCTG 1050
               ||||||||| ||||||||||| |||||||||||||||||||||||||| |
sj04565    886 ACTGCAGAAAGCTGACCCCAGCGACCCATTTGAGTCTCCCGTGATGGCCG 935
                L  Q  K  A  D  P  S  D  P  F  E  S  P  V  M  A  G

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
                 G  L  F  A  V  D  R  K  W  F  W  E  L  G  G  Y  
mfj07125  1051 GAGGGTTGTTCGCTGTGGACCGGAAATGGTTCTGGGAGTTGGGCGGCTAC 1100
               | ||  ||||||| ||||| ||||| |||||||||||  | ||||| || 
sj04565    936 GTGGACTGTTCGCCGTGGATCGGAAGTGGTTCTGGGAACTCGGCGGGTAT 985
                 G  L  F  A  V  D  R  K  W  F  W  E  L  G  G  Y  

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
               D  P  G  L  E  I  W  G  G  E  Q  Y  E  I  S  F  K 
mfj07125  1101 GACCCTGGCTTGGAGATCTGGGGAGGAGAGCAGTATGAGATCTCCTTCAA 1150
               ||||| |||||||||||||||||||| ||||||||||| |||||||||||
sj04565    986 GACCCAGGCTTGGAGATCTGGGGAGGGGAGCAGTATGAAATCTCCTTCAA 1035
               D  P  G  L  E  I  W  G  G  E  Q  Y  E  I  S  F  K 

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
                V  W  M  C  G  G  R  M  E  D  I  P  C  S  R      
mfj07125  1151 GGTGTGGATGTGTGGGGGCCGCATGGAGGACATCCCCTGCTCCAGAGTGG 1200
               |||| |   |       | |||   |       | |   |||| ||||| 
sj04565   1036 GGTGAGCCAGCTCTCCAGACGCCCCGTTCTTGGCACAGCCTCCTGAGTG. 1084
                V  S  Q  L  S  R  R  P  V  L  G  T  A  S  *      

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
mfj07125  1201 GCCACATCTACAGGAAGTATGTGCCCTACAAGGTCCCTGCCGGAGTCAGC 1250
                                    || || |  ||||        |  |||||
sj04565   1085 ...................CCTGTCCCAGTAGGT........GTCTCAGC 1107

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
mfj07125  1251 CTGGCCCGGAACCTGAAGCGAGTGGCAGAGGTATGGATGGATGAATACGC 1300
                |   || || | || |  || |||  |    | || |            
sj04565   1108 TTCTGCCTGAGCTTGGAAAGACTGGAGGCCTCAGGGTT............ 1145

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
mfj07125  1301 AGAATACATCTACCAGCGCAGGCCGGAGTACCGCCACCTCTCAGCTGGAG 1350
                                     | | ||  |  |  ||  |||| || ||
sj04565   1146 ......................CTGTAGCCCTTCTGCCCATCAGGTGAAG 1173

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
mfj07125  1351 ATGTCGTGGCCCAGAAAAAGCTCCGAGTCTCCCTCAACTGTAAGAGCTTC 1400
               | |            | | |  |  |    ||      |||    |  | 
sj04565   1174 AAG............ACAGGGGCTCATGGGCCACTCTTTGTTGTGGGGTG 1211

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
mfj07125  1401 AAGTGGTTTATGACCAAA....ATTGCCTGGGACCTGCCCAAG..TTCTA 1444
                 | ||| |  ||   ||    | | |     ||||||| |||  |  | 
sj04565   1212 GGGGGGTGTGGGAGGGAAGGGGAGTACTCTCCACCTGCCAAAGGCTGGTC 1261

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
mfj07125  1445 CCCACCCGTGGAACCCCCGGCTGCAGCATGGGGGGAGATTCGCAATGTGG 1494
               | ||||   |      | |||    || | | |     ||   |   |||
sj04565   1262 CTCACCACAGCTCTGACTGGCATTTGCCTTGTGTCTTCTTAAGATGTTGG 1311

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
mfj07125  1495 GCACAGGACTGTGCACAGACACGAAGCTTGGCACACTGGGCTCCCCACTG 1544
                   ||| ||                 |   | ||   |||    |   |
sj04565   1312 AATAAGGTCT.............TGCTTCTACTCAGATGGCAGGTCTGAG 1348

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
mfj07125  1545 AGGCTCGAGACCTGCATCCGGGGCCGAGGCGAG.GCTGCTTGGAACAGTA 1593
               |       | || |||     |     ||| || |  ||| ||||    |
sj04565   1349 ATTGAGATGTCCAGCAAATAAGCAGTGGGCCAGAGAAGCTAGGAAGGCCA 1398

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
mfj07125  1594 TGCAGGTCTTTACCTTCACCTGGCGGGAGGACATCCGGCCTGGAGACCCT 1643
                 ||||    ||| |   ||| |                  |||| ||  
sj04565   1399 AACAGG...ATACGTAGGCCTAG.................AGGAGTCCTC 1428

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
mfj07125  1644 CAGCACACCAAGAAGTTTTGCTTCGACGCTGTCTCCCACACCAGCCCAGT 1693
                    ||||   |  |||  ||| |   ||||  | |          |  
sj04565   1429 TCAGTCACCCCAAGTTTTCCCTTTGTACCTGTTGCTCTAGGAGTTTGACA 1478

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
mfj07125  1694 CACCCTCTACGACTGCCACAGCATGAAGGGCAACCAGCTGTGGAAATACC 1743
                |  |             |||   | |      |||| |||  |  ||| 
sj04565   1479 AAGAC.............CAGTGAGCATAAGCTCCAGTTGTAAAGTTAC. 1514

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
mfj07125  1744 GAAAGGACAAGACGCTGTACCACCCTGTGAGCGGCAGCTGCATGGACTGC 1793
                ||||| |  ||  | |  ||             ||||| |||   | | 
sj04565   1515 .AAAGGCCTGGATTCAGATCC.............CAGCTCCATCATCAGG 1550

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
mfj07125  1794 AGCGAGAGTGACCATAGGGTCTTCATGAACACCTGCAATCCCTCCTCCCT 1843
               ||| |           |    ||     || ||  | | |  || | |||
sj04565   1551 AGCTATCTGACTTTGGGCAAGTTAGATCACCCCCCCGAGCTTTCTTTCCT 1600

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
mfj07125  1844 CACCCAGCAGTGGCTCTTTGAACACACCAACTCGACGGTCTTAGAGAATT 1893
               || |    |   |    |  || |   | ||    |   |  ||  |   
sj04565   1601 CATCTGAAATAAGGGAAT..AATAATACTACCTAGCTTACAGAGCTATCG 1648

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
mfj07125  1894 TCAACAAGAACTGAGTCCTT........AGACCTTGACAAACCCCTCAGG 1935
               | || |  || ||||  | |        ||  |||  || ||  |   ||
sj04565   1649 TGAAGATTAAATGAGATCATGTCTAGAAAGTGCTTAGCATACAACCTGGG 1698

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
mfj07125  1936 TTGCTGTGGAGCTCATAAACCTTCCTCCTGTGGGAGAAGAGGCATCGGTG 1985
                   ||   |||   |||   ||  |   |     |   | |  ||||||
sj04565   1699 AACATGACCAGCAATTAATAATTGGT..AGAAATTGTTAAAGTTTCGGTG 1746

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
mfj07125  1986 GGCACCAAGGTGCTGGGTTCTTGAAGGACTGACATGGTGGGGCCACGGGG 2035
                | |   |  | |||    ||                             
sj04565   1747 AGTAAATATTTACTGTAACCT............................. 1767

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
mfj07125  2036 AGAACAGACCATACCAATGGCTCTCCAAGAAGGCGGAGCCTGCT..CACA 2083
                 |   |||||  | |  | ||||  |||    | ||   |  |   | |
sj04565   1768 ..ACTTGACCAGCCTATGGACTCTGGAAGCTTTCTGACAGTAGTGGTAAA 1815

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
mfj07125  2084 TCATAGCAGAGCTCACCAGCCTGTCAGCATGTTCCCTAAGTGTTAGGAAT 2133
                 |      || | || |     | |  | |  ||| || |         
sj04565   1816 GGAGTTACTAGTTAACTAATAACTAATTAAGCACCCAAACT......... 1856

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
mfj07125  2134 CGCCTGGGCAGCCTTGAGCCATGAGGTTGCCCTTGCAGACAGGACGGTGC 2183
                 ||  |||  | ||   |  |    |||   | | || | |    || |
sj04565   1857 .TCCAAGGCTACATTCTCCACTTTATTTG...TGGGAGTCTGTCTTGTTC 1902

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
mfj07125  2184 CCTAGAAAGGAAGGTGGTATCGGCCTTGGGACAGCTTAAACCTGTGTGCC 2233
                | ||   | ||| | | | |  |   |||             | | |  
sj04565   1903 TCAAG..TGAAAGCTTGGACCTTCTGAGGG.............GAGGGTT 1937

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
mfj07125  2234 AGCTGCTGGCAAGGAAGTCTGCCTGTTCTTGAGGGAACTGCTAGAATTGC 2283
               ||||  |  || |    | || |   ||  |||  | || |||       
sj04565   1938 AGCTTGTCCCATGCCCTTGTGGCCTGTC.AGAGTCAGCTTCTA....... 1979

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
mfj07125  2284 CCAGCTTCTGTGTTGGTCCAGGGCAATGAGAGTCCATTGGGACTTCCGAG 2333
                ||||||        | | | ||||         |          | || 
sj04565   1980 ACAGCTTAGACCCCTGGCTAAGGCATATCCCCAGCCCACAAGGGACAGAT 2029

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
mfj07125  2334 TGCTCCATAGCT......AGCACTGGCCAGCAACCAGGCGAGGGGCCCCT 2377
                || ||||  ||      | | |||   |   || |  |    | |||||
sj04565   2030 AGCACCATTACTGATCTGACCCCTGTGAACACACAACTCTGATGCCCCCT 2079

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
mfj07125  2378 TCCTCTGCAGCCAGATGTAAAGGATGTCTCCCCTGGCTCTCTGGGT.ATT 2426
                     ||  | |  |  |  | |     ||  || |   |   || | |
sj04565   2080 CATCGGGCCTCAACTTTCAGTGCAAAGGACCATTGTCAGGCACAGTGAAT 2129

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
mfj07125  2427 TCAGATGCCCGTTCTAGTTTCAGGGCTACCTGGGCACCAGGTCGTCAGGG 2476
               | ||      ||  | ||  ||| |   |  |  ||     | |    | 
sj04565   2130 TAAGGCTTTGGTATTGGTGCCAGAGTGCCACGATCAGATCCTAGCTCTGC 2179

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
mfj07125  2477 CTAGTTCAGCCGGCTAAGTAGACCTCCAGACCGAACAGCTCCCAGCCGAC 2526
               |  || | ||| |||  ||   | |                         
sj04565   2180 CGTGTCCTGCCAGCTGTGTGATCTT......................... 2204

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
mfj07125  2527 GCTTCCAAAGCCCTTTCTCCGTGCTTTTCCTTGGTGGCTCCCTGCCTTGG 2576
                    ||| |     || ||   ||   |||||||  || | | | |   
sj04565   2205 ..GGGCAAGGAATCCTCACCTCACTGAGCCTTGGTTTCTACTTCCAT... 2249

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
mfj07125  2577 AGAGGAACCGGTGCTGTGAGGGATCACCTC.CAGAGTCTCCTGGGGGGTG 2625
                 | |      |  ||  | |     |||| ||||||    ||  | | |
sj04565   2250 .AAAGTGGGTTTAATGAAACGTTAATCCTCACAGAGT....TGTTGAGAG 2294

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
mfj07125  2626 GCTTCCCCCAGATAATGACTGCTGTGGTTCCAACCTCACAGAACCCTGGA 2675
               | ||     |||  |||  |  |  |           | |  | |||  |
sj04565   2295 GATTAAGTGAGACCATGCTTATTAGGTGCTTCTTAATAAATTATCCTAAA 2344

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
mfj07125  2676 GTTTCTGGAAAGTTCTGTGGTTCTGTTGAAAGCATAGATGAGCCATGGCA 2725
               | || |    | | |  |  |  | ||          ||  ||||  |  
sj04565   2345 GATTATTATCAATACATTAATATTATT..........ATCTGCCACAGTG 2384

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
mfj07125  2726 CGTGTG.GGCATATAACGCAAGCAGCCAGGTGTCAGGCAACCCCTGACCC 2774
                 || |  |   | |||   || |   |  |    |   | |||  |   
sj04565   2385 GTTGAGTAGTTCAGAACTGGAGAACATAAATTCTTGATTAGCCCAAAAAA 2434

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
mfj07125  2775 AAGCAGAGGCGGTAGGGCACCAGAAGCTTCGGTCCAACCCAATGCCGTCA 2824
               ||  | |           | |  |   |||  |  |    | |   ||  
sj04565   2435 AAAAAAA...........AACCTACAATTCTTTTGATGTTATTTAGGTTT 2473

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
mfj07125  2825 CAGCCACAGCCGCGTGAGGTGTGAGGACATCACCTTTAGCCCCATGTCTC 2874
                |    |||          | |     | |  | |||       | | | 
sj04565   2474 GAAAAGCAGTTTATATCCTTTTTTTTTCTTTTCTTTTCTTTTGTTTTTTT 2523

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
mfj07125  2875 AAACAAGAACTCACCCTCCAAGGAGCTGGTCACTTGCCAGTGAAGTATCT 2924
                     ||  |     | ||    ||||  ||      |||| ||||   
sj04565   2524 TTTTTTGAGATGGAGTTTCACTCTGCTGCCCAGGCTGGAGTGCAGTAGTG 2573

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
mfj07125  2925 GAGACATGGTCCTGAGGCCAGAACTCTGCCTTAGAGATGCTGGGATCGGG 2974
                   | |||  |          |||    | |  |  | ||||| ||  |
sj04565   2574 CGATCTTGGCTC..........ACTGCAGCCTCCACCTCCTGGGTTCAAG 2613

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
mfj07125  2975 GTCATCGGGTCCCCAGGCTGGTCGGGTTGGTGCTGTAGAA..CCACCTCC 3022
                   ||   | ||   ||     | || | ||       |  |  || ||
sj04565   2614 TGATTCTCCTGCCTCAGCCTCCTGAGTGGCTGGGACTACAGGCGCCCACC 2663

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
mfj07125  3023 ACGTAGCCCCTGTGCTGTCACAGCTCACTTGTGGATTTCTAGTGCCCTTT 3072
               ||   ||||   |  ||| | || |    | | ||  | |  || ||   
sj04565   2664 ACCACGCCCAGCTAATGT.AGAGATGGGGTTTCGACATGT..TGACCAGG 2710

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
mfj07125  3073 TCCATATGAGCACTCTGTCTGACAAGTGGCCGGCTGGGAAGGAGTCAAAA 3122
                   | |   | | ||| |          ||  |      ||  |   ||
sj04565   2711 CTGGTCTTGACCCCCTGACCTCAGGTGATCCACCCACCTCGGCCTTTCAA 2760

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
mfj07125  3123 AGGGGAGTGGGTGGGTGTCCAGAATCCAGCAGGGATGCGTGTTGCAGCCA 3172
               ||       | ||||  | |||     |||     ||| ||        |
sj04565   2761 AG......TGCTGGGATTACAGGTGTGAGCCACTGTGCCTGGCCAGTTTA 2804

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
mfj07125  3173 AGGGGAGTTGAGTCCTCAGAGAGCAATGCGGCCTCGTTTCAATAAAAACC 3222
                    | || |  |  |||||  |                ||  | | | 
sj04565   2805 TATCTATTTTAACCACCAGAGTTCTGAAGTTGTCTCCCATAAGGAGACCA 2854

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
mfj07125  3223 GTGCCTTTTACAAAGAGAAAATGCAGCCGAGCAGCTGATTCCCTAAACTT 3272
               |  || |  | |||   || || ||    ||      ||||   | |  |
sj04565   2855 GCCCCCTAAATAAAATTAATATTCACATAAGGGTAATATTCAAAATATGT 2904

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
mfj07125  3273 GAACCACTTACTAGTGCCTTGCTAGACAGACAG.ACAGACAGGGGAGCGT 3321
                |      |  ||   |      |  ||| ||| ||||| |   |     
sj04565   2905 AACAACTGTGATAACACAAGCACATCCAGTCAGAACAGATACCAGCTATA 2954

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
mfj07125  3322 GGAGGAGGGGCACTTATTCAGGTCCTATGAGCCCAATGAGTGTCTTTACG 3371
                     || |||   | ||         | |   ||  ||||   ||  |
sj04565   2955 AACAATGGTGCATCCACTC.......CAGCGTGTAACAAGTGAAGTTCGG 2997

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
mfj07125  3372 TCTGACTTCAAGCAGAAAGTGCAGAGCAGAACCTGAGACCCAGAGGCCCC 3421
               ||    |   |||  | ||  ||| |                 | |||| 
sj04565   2998 TCCTGATCATAGCTAACAGGACAGTG.............TGCCAAGCCCT 3034

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
mfj07125  3422 CACAGCAGGGACAACTGCCTATTTGTGCGGCCCTCCCTGAGACAGGACAG 3471
                    || |   |  ||  || |  |     |  || |  || ||     
sj04565   3035 TCATACATGCTGACTTGTTTAATCCTCACAACAACCTTAGGAGAGTTGTA 3084

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
mfj07125  3472 GCTCTAGAGACCTGACAAGCCCAGAAGTGCTCTGCCTGAACCTCACTATC 3521
                |  ||     |        |||| |  ||        || ||||  | |
sj04565   3085 TCATTATTATACCCGTTTCACCAGGAAGGCAAGC...AAAGCTCAG.ACC 3130

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
mfj07125  3522 AGGGGCGAGCTGAGCAGCTGGGTTTCCAGCGGATGCCAAGCAGGTGGTTA 3571
               | || |  ||  ||| |   |      | | |  ||| |   |  |||  
sj04565   3131 AAGGCCTCGCACAGCCGGAAGAAGCAGAACTGGGGCCCAAACGCAGGTCT 3180

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
mfj07125  3572 GGGTGGTTAAGGCAGATGCTGCCGCAAGCCATCCCTAGCCTCACTCGCTC 3621
               |  ||  |              |  |||||  | ||   || ||  ||| 
sj04565   3181 GCTTGACT..............CCAAAGCCCACGCT...CTGACCTGCTA 3213

          3651 ----+----*----+----*----+----*----+----*----+----* 3700
mfj07125  3622 CCTTGCTCGCCCGCCCGATTCATTCCATCCTCATCTGGTTCTGTCCCCTT 3671
                 ||  | |         || |   ||| | ||    ||||||    | |
sj04565   3214 TTTTTGTTG......TTGTTTAAATCATACCCAGACTGTTCTGAAAACCT 3257

          3701 ----+----*----+----*----+----*----+----*----+----* 3750
mfj07125  3672 CTCCAGAAGTCACTTCCTCTGAGCGAACCTCAGCATTTGTGACTGCTGAA 3721
                 |  |   |     ||||||      ||||| | ||| ||     |   
sj04565   3258 GCCATGTTTTATGGACCTCTG......CCTCACCCTTTCTG.GGATTTTT 3300

          3751 ----+----*----+----*----+----*----+----*----+----* 3800
mfj07125  3722 CTCTGACCTCAGAGCCTAAGACTTGAGGAGGTGTGTCACAGGAAGAACCA 3771
                | |    | |   | |  |   | |      || |    |||    |  
sj04565   3301 TTTTTTTTTTACCTCTTCTGGTATTATTCCTAGTTTACTTGGATATTCTG 3350

          3801 ----+----*----+----*----+----*----+----*----+----* 3850
mfj07125  3772 GGTTGGCTTGGTGGCTGGCTGCAGATACTTAATCCCCACCTTGTTTTGGC 3821
                  |  ||| ||   |||    |   ||  ||||     |     | |  
sj04565   3351 CAATTTCTTAGTTAATGGAATTAATAAC..AATCTAAGTCGGAAGTGGCA 3398

          3851 ----+----*----+----*----+----*----+----*----+----* 3900
mfj07125  3822 TTCAGGTGTGGAAATCCTTGTCCTGAAGAGTCAGGTTTCTACTCTGCTGA 3871
                  |||    | |||  | | |  || | |    |  |||  |  ||  |
sj04565   3399 AATAGGGCCAGGAATGGTGGCCGAGATGGG...AGGATCTCTTGAGCCTA 3445

          3901 ----+----*----+----*----+----*----+----*----+----* 3950
mfj07125  3872 AGGGCCTGTGCCACAGCCCACGCAGCAGGCCGGGCGGCTGGCCTCTTCCT 3921
                | |  || | | |||||    || ||   |  |   |   |   ||   
sj04565   3446 GGAGTTTGAGAC.CAGCCTGGACAACACAACACGACCCCATCTCATTAAA 3494

          3951 ----+----*----+----*----+----*----+----*----+----* 4000
mfj07125  3922 CCAAAGCTTTATTCAGAGGCTAAGACTACAAAAACAAGATGTGGTTAGAA 3971
                 |||     |   ||| |  ||||     | |   ||| |  ||  | |
sj04565   3495 AAAAAAAAAAAAAAAGAAGGAAAGAAAGAGAGAGAGAGAAGGAGTGGGGA 3544

          4001 ----+----*----+----*----+----*----+----*----+----* 4050
mfj07125  3972 AGGCGGCCTCCCCTCCGCCCCGAAGATTCCAGAAACATTTTGGAATGCAG 4021
                ||                           |||   |    | || | ||
sj04565   3545 GGG.........................AGAGAGGGAGGGGGAAAGGGAG 3569

          4051 ----+----*----+----*----+----*----+----*----+----* 4100
mfj07125  4022 TGTCCTTGCCATGAGGCCATTGTGTGGCAGGCAGGCTGTCTTACCCTGCC 4071
                |     | || |||           |||   ||| |      |||||||
sj04565   3570 AGAGAGAGACA.GAGAGAGAGACACAGCAAATAGGTTTCTACTCCCTGCC 3618

          4101 ----+----*----+----*----+----*----+----*----+----* 4150
mfj07125  4072 CTGCCAACTAGAGCTTCTGGCTTTAAAAGCAGCCAGCAATGATAGACCTT 4121
                 |||||||      |    | ||   ||  ||   |   | | |   ||
sj04565   3619 AGGCCAACT.....CTGATCCATTGGTAGGGGCTGCCCCAGGTGGGTGTT 3663

          4151 ----+----*----+----*----+----*----+----*----+----* 4200
mfj07125  4122 GCGTTGCGGCAGTGAGCTGCTCTGATGGGCGGCCTAGTGGATCTCCAAAG 4171
               |   |||        ||||||           || ||   |||  |||||
sj04565   3664 GATATGCATTCTGAGGCTGCT..........TCCAAGCTTATCAGCAAAG 3703

          4201 ----+----*----+----*----+----*----+----*----+----* 4250
mfj07125  4172 TCAGCATCACGATTCCCCTTCAGTCCTTCCTGTCACGCTCCTCCCTGCGT 4221
                      |  |            |  |   | |||| | || || |    
sj04565   3704 AGTAGTCCGTGGGGGAGGGATCTTTTTGTGTTTCACTCACCGCCAT.... 3749

          4251 ----+----*----+----*----+----*----+----*----+----* 4300
mfj07125  4222 GGACCCCTCGCTTCAGCAGTCCCTACTTCTCACAGAGGAGACTGTCTGCA 4271
                    ||    | |   |  ||        ||||||  ||||  | ||  
sj04565   3750 ...ATCCCAAGTACCTAAAGCCTGGTCCAACACAGAAAAGACACTATGAG 3796

          4301 ----+----*----+----*----+----*----+----*----+----* 4350
mfj07125  4272 TCCAGTGCTCAGGGCAGCCTGTTTGTCTAAAGTCAGGCAGTGTGAAAGGA 4321
                ||| |  | | |        ||| | | |    |   | | |       
sj04565   3797 ACCAATTTTTATGAGTAATAATTTTTATTATTGTATTAAATCT.....TT 3841

          4351 ----+----*----+----*----+----*----+----*----+----* 4400
mfj07125  4322 ACAAAGAGTGCAGTTCCACCCTGAATTCAT.CAGCCGCTGAGGCTTTCTC 4370
                | || | |  | ||  |     |  | ||  |    || |   | | | 
sj04565   3842 TCTAAAATTATATTTATATAAATATCTTATAAATATTCTAAAAATATGTA 3891

          4401 ----+----*----+----*----+----*----+----*----+----* 4450
mfj07125  4371 CGGCAAATCCTACTCATATTTTGGTTCAAGGTTTTGATGCTGAGCCAGGG 4420
                     ||   | ||   |  | ||||     |   |   | |||||   
sj04565   3892 AAATGTATAAAAGTC...TAGTAGTTCTGATATAACACTGTCAGCCATAA 3938

          4451 ----+----*----+----*----+----*----+----*----+----* 4500
mfj07125  4421 CCCT.GCTGCCACCATTAGGTGAGAGTGGTAGCTACATCCCAGGTTTCAA 4469
                 || | |  ||   | |  |   |    ||   | ||  |    |||||
sj04565   3939 TTCTGGTTATCATGTTAAAATACTACATATAATAAAATAACTAAATTCAA 3988

          4501 ----+----*----+----*----+----*----+----*----+----* 4550
mfj07125  4470 GA........TCTTAACGCGTTCCACTCAGCTCTGACAGGGAGTCCAGAG 4511
               ||         |  |    ||   || |     | ||    | | || | 
sj04565   3989 GACCAGCCTGGCCAACATTGTGAAACCCCATCTTTACTAAAAATACAAAA 4038

          4551 ----+----*----+----*----+----*----+----*----+----* 4600
mfj07125  4512 GCTGCAGGCAGGGAAGCTGGGCACTGAGACAGGGTTCCGGGGATGGGGGA 4561
                 |  || ||||   | |||  ||        | |||| |  |   ||||
sj04565   4039 ATT..AGCCAGGCGTGGTGG.TACATGCCTGTGATTCCAGCTACTCGGGA 4085

          4601 ----+----*----+----*----+----*----+----*----+----* 4650
mfj07125  4562 GGGGCGGATCCCAAGACCACCCACCTCTCCTGGAAGAGAGAGCCT..TGT 4609
               || |  ||   || ||  |          ||||  |  ||||  |   ||
sj04565   4086 GGTGGAGA...CAGGAGAATTGCTTGAAGCTGGGGGGCAGAGGTTGCAGT 4132

          4651 ----+----*----+----*----+----*----+----*----+----* 4700
mfj07125  4610 AAGGAATGACTTATCCTGTTCAGTTGTGACTGTGGTTGTTCAATAAACCT 4659
                ||    ||     ||  | || |     ||| |          | |   
sj04565   4133 GAGCCGAGATCGTGCCACTGCACTCTAATCTGGG........TGACAAAG 4174

          4701 ----+----*---- 4714
mfj07125  4660 CCAGACTTTCTCT. 4672
               | |||||   | | 
sj04565   4175 CGAGACTCCATGTC 4188