FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0161.ptfa, 350 aa vs ./tmplib.26680 library 1768667 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.3323+/-0.00459; mu= 11.6759+/- 0.307 mean_var=113.7458+/-27.365, 0's: 0 Z-trim: 5 B-trim: 7 in 1/35 Lambda= 0.1203 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4199 ( 510 res) mfj24036 ( 510) 396 79 5.6e-16 mKIAA0708 ( 2228 res) mbg06040 (2228) 311 65 4e-11 mFLJ00217 ( 590 res) mbh01524 ( 590) 276 58 1.1e-09 mKIAA1386 ( 1087 res) mbg07509 (1087) 162 39 0.0015 >>mKIAA4199 ( 510 res) mfj24036 (510 aa) initn: 340 init1: 183 opt: 396 Z-score: 379.2 bits: 79.2 E(): 5.6e-16 Smith-Waterman score: 396; 27.119% identity (28.571% ungapped) in 236 aa overlap (42-273:117-344) 20 30 40 50 60 70 mKIAA0 DGPLVQRPLPSTYGEKHLNTPKHSRTPRPGWKIPPLLTSALPTDCSAMTTARYRPTWDLA :.. .: .. . .. :: .:. . mKIAA4 EGALHEHMTSLASVLKVSHSVAKLILVNFHWQVSEILDRYRSNSAQLLVEARVQPNPSKH 90 100 110 120 130 140 80 90 100 110 120 mKIAA0 LD---PLVSCKLCLGEYPAEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAAC . : : .:. :.. ..: :: :: : .:. .:.:.:. ..::: : mKIAA4 VPTAHPPHHCAVCMQFVRKENLLSLA-CQHQFCRSCWEQHCSVLVKDGVGVGISCMAQDC 150 160 170 180 190 200 130 140 150 160 170 180 mKIAA0 PKQGHLQENEIECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDIGLQTP : . .. . . :. ..:.. :. : ::.. : : ..:. mKIAA4 PLRTP-EDFVFPLLPNEELRDKYRRYLFRDYVESHFQLQLCPGADCPMVIRVQE---PRA 210 220 230 240 250 260 190 200 210 220 230 240 mKIAA0 QLVQCKACDMEFCSACKARWHPGQGCPETMP-ITFLPGETSSAFKMEEGDAPIKRCPKCR . :::. :. :: :. .: : .: .. .: . .: : :::: mKIAA4 RRVQCNRCSEVFCFKCRQMYHAPTDCATIRKWLTKCADDSETANYI---SAHTKDCPKCN 270 280 290 300 310 250 260 270 280 290 300 mKIAA0 VYIERDEGCAQMMCKNCKHAFCWYCLESLDDDFLLIHYDKGPCRNKLGHSRASVIWHRTQ . ::.. :: .:.:..::: :::.:: mKIAA4 ICIEKNGGCNHMQCSKCKHDFCWMCLGDWKTHGSEYYECSRYKENPDIVNQSQQAQAREA 320 330 340 350 360 370 >>mKIAA0708 ( 2228 res) mbg06040 (2228 aa) initn: 239 init1: 188 opt: 311 Z-score: 292.1 bits: 65.2 E(): 4e-11 Smith-Waterman score: 311; 27.143% identity (30.481% ungapped) in 210 aa overlap (78-275:1772-1970) 50 60 70 80 90 100 mKIAA0 LTSALPTDCSAMTTARYRPTWDLALDPLVSCKLCLGEY-PAEQMTTIAQCQCIFCTLCLK : .:. : .. .. .: : : . mKIAA0 QSYSDDPEPLLLAAGLRVPQAQVVPTRPDQCPVCVTPLGPHDDSPSLCCLHCC-CKSCWN 1750 1760 1770 1780 1790 1800 110 120 130 140 150 160 mKIAA0 QYVELLIKEGLETAISCPDAACPKQ--GHLQENEIECMVAAEIMQRYKKLQFEREVLFDP .:. :.... .:: : :: : : . .: . . :....:.: .. : . mKIAA0 EYLTTRIEQNFVLNCTCPIADCPAQPTGAFIRNIVS---SPEVISKYEKALLRGYV--ES 1810 1820 1830 1840 1850 170 180 190 200 210 mKIAA0 CR--TWC--PASTCQAVCQLQDIGLQTPQLVQCKACDMEFCSACK-ARWHPGQGCPETMP : ::: : . . .:. : .: : :. : : .:. . : .: . mKIAA0 CSNLTWCTNPQGCDRILCR-QGLGSGTT----CSKCGWASCFSCSFPEAHYPASCGHMSQ 1860 1870 1880 1890 1900 1910 220 230 240 250 260 270 mKIAA0 IT----FLPGETSSAFKMEEGDAPIKRCPKCRVYIERDEGCAQMMCKNCKHAFCWYCLES . . : . : . . . ::::.:.. ::..::: .: : :.:.::: ::.: mKIAA0 WVDDGGYYDGMSVEAQSKHLAKLISKRCPSCQAPIEKNEGCLHMTCARCNHGFCWRCLKS 1920 1930 1940 1950 1960 1970 280 290 300 310 320 330 mKIAA0 LDDDFLLIHYDKGPCRNKLGHSRASVIWHRTQVVGIFAGFGLLLLVASPFLLLATPFVLC mKIAA0 WKPSHKDYYNCSAMVSKAARQEKRFQDYNERCTFHHQAREFAVNLRNQASAIQEVPPPKS 1980 1990 2000 2010 2020 2030 >>mFLJ00217 ( 590 res) mbh01524 (590 aa) initn: 211 init1: 85 opt: 276 Z-score: 265.9 bits: 58.4 E(): 1.1e-09 Smith-Waterman score: 288; 24.537% identity (27.895% ungapped) in 216 aa overlap (78-276:217-423) 50 60 70 80 90 100 mKIAA0 LTSALPTDCSAMTTARYRPTWDLALDPLVSCKLCLGEYPAEQMTTIAQCQCIFCTLCLKQ : .: : ... .. .:.: .: :..: mFLJ00 TPRNYELLDVVEAVRHSQDRAFLRRLLAQECAVCGWALPRNRVQALISCECTICPECFRQ 190 200 210 220 230 240 110 120 130 140 150 160 mKIAA0 YVELLIKEGLETAISCPDAACPKQGHLQENEIECMVAAEIMQRYKKLQFEREVLF----- . . .:: : . :: :: . .. .. . .. .: ..:. . .:: mFLJ00 HFTIALKEKHITDMVCP--ACGRPDLTDDAQLLSYFSTLDIQLRESLDPDAYALFHKKLT 250 260 270 280 290 300 170 180 190 200 210 mKIAA0 ------DPCRTWCPASTCQAVCQLQDIGLQTPQLVQCKACDMEFCSACKARW---HPGQG :: :: : :.. : . . : : . :: :: .: : :.. mFLJ00 EAVLMRDPKFLWC------AQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRS 310 320 330 340 350 220 230 240 250 260 270 mKIAA0 CPE--TMPITFLPGETSSAFKMEEGDAPIKRCPKCRV-YIERDEGCAQMMCKNCKHAFCW : . . : : .... : . : ::::. : :: .. : .:.: :: mFLJ00 CEDFQNWKRTNDPEYQAQGLAMYLQENGID-CPKCKFSYALARGGCMHFHCTQCRHQFCS 360 370 380 390 400 410 280 290 300 310 320 330 mKIAA0 YCLESLDDDFLLIHYDKGPCRNKLGHSRASVIWHRTQVVGIFAGFGLLLLVASPFLLLAT : ... mFLJ00 GCYNAFYAKNKCPDPNCKVKKSLHGHHPRDCLFYLRDWTAARLQKLLQDNNVMFNTEPPA 420 430 440 450 460 470 >>mKIAA1386 ( 1087 res) mbg07509 (1087 aa) initn: 273 init1: 136 opt: 162 Z-score: 156.0 bits: 39.0 E(): 0.0015 Smith-Waterman score: 325; 26.855% identity (31.535% ungapped) in 283 aa overlap (16-274:289-553) 10 20 30 40 mKIAA0 VWCTRGCFSQLDGPLVQRPLPSTYGEKHLNTPKHSRTPRPGWKIP :: : : : . .: :::: mKIAA1 EALLRAHDWDREKLLEAWMSNPENCCQRSGVQMPTPPPSGYNAWDTLPSPRTPRT----- 260 270 280 290 300 310 50 60 70 80 90 100 mKIAA0 PLLTSALPTDCSAMTTARYRPTWDLALDPLVSCKLCLGEYPAEQMTTIAQCQCIFCTLCL .:. : ... . : .: . :.. . : :... : :: : mKIAA1 -TRSSVTSPDEISLSPGDL----DTSLCDICMCSISVFEDPVDM-----PCGHDFCRGCW 320 330 340 350 360 110 120 130 140 150 160 mKIAA0 KQYVELLIKEGLETAISCPDAACPKQGHLQENEIECMVAAEIMQRYKKLQFEREVLFDPC . ...: :.:: : :: : . . . :: .:. :. .:: ..... : .: mKIAA1 EAFLNLKIQEGEAHNIFCPAYECFQL--VPVDVIESVVSKEMDKRYLQFDIKAFVENNPA 370 380 390 400 410 420 170 180 190 200 210 mKIAA0 RTWCPASTCQAVCQLQDIG--------LQTPQL----VQCKACDMEFCSACKARWHPGQG :::.. :. . .: : :. : : :.: . :: : .. : mKIAA1 IKWCPTAGCERAVRLTKQGSNPSGSDTLSFPLLRAPAVDCGKGHL-FCWECLGEAHEPCD 430 440 450 460 470 480 220 230 240 250 260 mKIAA0 CPE----TMPITFL-PGETSSAFKMEEGDAPI-------KRCPKCRVYIERDEGCAQMMC : . :: . : : .. . : : : : .:. :...::: .:.: mKIAA1 CQTWKNWLQKITEMKPEELVGVSEAYEDAANCLWLLTNSKPCANCKSPIQKNEGCNHMQC 490 500 510 520 530 540 270 280 290 300 310 320 mKIAA0 KNCKHAFCWYCLESLDDDFLLIHYDKGPCRNKLGHSRASVIWHRTQVVGIFAGFGLLLLV .::. ::: ::: mKIAA1 AKCKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQHVEEQSKEMTVEAEKKHKRFQELDR 550 560 570 580 590 600 350 residues in 1 query sequences 1768667 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:13:29 2006 done: Mon Mar 27 10:13:29 2006 Scan time: 0.570 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]