FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1130.ptfa, 655 aa vs ./tmplib.26680 library 1768362 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.8281+/-0.00441; mu= 11.1748+/- 0.294 mean_var=102.7104+/-25.059, 0's: 0 Z-trim: 1 B-trim: 0 in 0/36 Lambda= 0.1266 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mFLJ00205 ( 634 res) mfj07125 ( 634) 1248 238 1.5e-63 >>mFLJ00205 ( 634 res) mfj07125 (634 aa) initn: 1255 init1: 408 opt: 1248 Z-score: 1233.3 bits: 238.4 E(): 1.5e-63 Smith-Waterman score: 1306; 37.838% identity (42.274% ungapped) in 629 aa overlap (77-655:11-623) 50 60 70 80 90 100 mKIAA1 GQGQGSRVFAGDSGLSSPAQATTNGWGSKLPCSGSESTPASGPTRSARPPTMRKIRA--- : .: .. . : .: . : ::. . mFLJ00 RPLLLAELLPPPGGRADAQSRGRARRGGPAPMRRKEKRLL 10 20 30 40 110 120 130 140 150 mKIAA1 NAIAILTVAWILGTFYYLWQ--DNRAHAASSSGRGAQRAGGRPEQL--REDRTIPLIVTG .:.:. .: .: :: .: .: .: :: : . ..: :. .:. : : mFLJ00 QAVALALAALVLLPNVGLWALYRERQPDGSPGGLGAAVAPAAVQELHSRQKKTFFL---G 50 60 70 80 90 160 170 180 190 200 mKIAA1 TPSKGFD----EKAYLSAKQLKPGED--PY------------RQHAFNQLESDKLSSDRP . .. : : .:... ::. :: :...:: :::.: .: mFLJ00 AEQRLKDWHNKEAIRRDAQRVGYGEQGKPYPMTDAERVDQAYRENGFNIYVSDKISLNRS 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA1 IRDTRHYSCPSLSYSSDLPATSVIITFHNEARSTLLRTVKSVLNRTPASLIQEIILVDDF . : :: .: : : :: ::.:: ::::. :.:::::.:::::.: :. ::.::::: mFLJ00 LPDIRHPNCNSKLYLETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDF 160 170 180 190 200 210 270 280 290 300 310 mKIAA1 SS-----DP-EDCLLLTRIPKVKCLRNDKREGLIRSRVRGADVAGATVLTFLDSHCEVNV :. : :: . : .:.:. ::. :::::::.:. ::..: . :.::::::::.:: mFLJ00 SDREHLKKPLEDYMAL--FPSVRILRTKKREGLIRTRMLGASAATGDVITFLDSHCEANV 220 230 240 250 260 270 320 330 340 350 360 370 mKIAA1 EWLQPMLQRVMEDHTRVVSPIIDVISLDNFAYLAASAD-LRGGFDWSLHFKWEQIPLEQK .:: :.:.:. ... .: :.::::. :.: : . ..: .::.::: ...: .::. . mFLJ00 NWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYK--RIPIPPE 280 290 300 310 320 330 380 390 400 410 420 430 mKIAA1 MTRTDPTKPIRTPVIAGGIFVIDKSWFNHLGKYDAQMDIWGGENFELSFRVWMCGGSLEI . ..::. :...::.:::.:..:..:: .:: :: ..:::::..:.::.:::::: .: mFLJ00 LQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMED 340 350 360 370 380 390 440 450 460 470 480 490 mKIAA1 VPCSRVGHVFRKRHPYNFPEGNALTYIRNTKRTAEVWMDEYKQYYYEARPSAIGKAFGSV .:::::::..:: ::. : : .:. :: ::.:::::::: .: :. :: . :.: mFLJ00 IPCSRVGHIYRKYVPYKVPAGVSLA--RNLKRVAEVWMDEYAEYIYQRRPEYRHLSAGDV 400 410 420 430 440 450 500 510 520 530 540 mKIAA1 ATRIEQRKKMDCKSFRWYLENV---YPELTVPVKE--VLPGVIKQ-GVN-CLESQGQNTA ... . : ...::::.:.. .. :.. ::. . : :.. :.. : ... . . mFLJ00 VAQKKLRVSLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVGTGLCTDTKLGTLG 460 470 480 490 500 510 550 560 570 580 590 mKIAA1 GDLLLGMGICRGSAKSP-PPAQAWLFSDHLIQQQGK-------CLAATSTLMSSPGSPVI . : : : :: ... :.. :. . . : :. :.: ::: mFLJ00 SPLRLETCI-RGRGEAAWNSMQVFTFTWREDIRPGDPQHTKKFCFDAVSHT-----SPVT 520 530 540 550 560 600 610 620 630 640 650 mKIAA1 LQTCNPKEGKQKWR-RKGSFIQHSVSGLCLETKPA--QLVTSKCQTDAQAQQWQLLPHT : :. .:.: :. :: . . : ::: :.. . . .. . :. .. .::: :. :: mFLJ00 LYDCHSMKGNQLWKYRKDKTLYHPVSGSCMDCSESDHRVFMNTCNPSSLTQQW-LFEHTN 570 580 590 600 610 620 mFLJ00 STVLENFNKN 630 655 residues in 1 query sequences 1768362 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:36:49 2006 done: Mon Mar 27 10:36:50 2006 Scan time: 0.790 Display time: 0.040 Function used was FASTA [version 3.4t11 Apr 17, 2002]