# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj05239.fasta.nr -Q ../query/mFLJ00213.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00213, 279 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920689 sequences Expectation_n fit: rho(ln(x))= 5.4965+/-0.000186; mu= 8.2658+/- 0.010 mean_var=81.9196+/-15.596, 0's: 33 Z-trim: 37 B-trim: 13 in 1/64 Lambda= 0.141703 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|47847472|dbj|BAD21408.1| mFLJ00213 protein [Mus ( 279) 1853 387.9 1.1e-105 gi|148693492|gb|EDL25439.1| transforming growth fa ( 226) 1109 235.7 5.5e-60 gi|12847853|dbj|BAB27734.1| unnamed protein produc ( 152) 919 196.7 2e-48 gi|74151466|dbj|BAE38845.1| unnamed protein produc ( 406) 919 197.1 4.3e-48 gi|74185221|dbj|BAE30090.1| unnamed protein produc ( 406) 919 197.1 4.3e-48 gi|125991204|sp|Q3UB74.2|TBRG1_MOUSE RecName: Full ( 406) 919 197.1 4.3e-48 gi|74151716|dbj|BAE29651.1| unnamed protein produc ( 406) 911 195.4 1.3e-47 gi|125991205|sp|Q5PQK8.2|TBRG1_RAT RecName: Full=T ( 406) 890 191.1 2.6e-46 gi|112180481|gb|AAH43022.3| Transforming growth fa ( 386) 798 172.3 1.2e-40 gi|41351146|gb|AAH65795.1| Transforming growth fac ( 386) 798 172.3 1.2e-40 gi|114640970|ref|XP_522238.2| PREDICTED: transform ( 411) 794 171.5 2.1e-40 gi|121943045|sp|Q3YBR2.1|TBRG1_HUMAN RecName: Full ( 411) 794 171.5 2.1e-40 gi|73954591|ref|XP_859029.1| PREDICTED: similar to ( 160) 782 168.8 5.6e-40 gi|149716642|ref|XP_001505117.1| PREDICTED: simila ( 411) 785 169.7 7.6e-40 gi|109109107|ref|XP_001109750.1| PREDICTED: simila ( 411) 783 169.3 1e-39 gi|73954585|ref|XP_546430.2| PREDICTED: similar to ( 411) 781 168.9 1.3e-39 gi|56268921|gb|AAH87142.1| Transforming growth fac ( 386) 769 166.4 7e-39 gi|158455076|gb|AAI14193.2| TBRG1 protein [Bos tau ( 143) 714 154.8 7.9e-36 gi|116283881|gb|AAH41043.1| TBRG1 protein [Homo sa ( 139) 707 153.4 2.1e-35 gi|49117273|gb|AAH73160.1| TBRG1 protein [Homo sap ( 122) 656 142.9 2.6e-32 gi|126327219|ref|XP_001364513.1| PREDICTED: simila ( 411) 659 143.9 4.3e-32 gi|149028733|gb|EDL84074.1| transforming growth fa ( 158) 634 138.5 7.1e-31 gi|149038657|gb|EDL92946.1| rCG64266 [Rattus norve ( 187) 634 138.5 8.1e-31 gi|18676628|dbj|BAB84966.1| FLJ00213 protein [Homo ( 186) 509 113.0 4e-23 gi|51847794|gb|AAU10523.1| transforming growth fac ( 187) 509 113.0 4e-23 gi|19584298|emb|CAD28450.1| hypothetical protein [ ( 192) 509 113.0 4.1e-23 gi|14042268|dbj|BAB55177.1| unnamed protein produc ( 260) 509 113.1 5.2e-23 gi|109109109|ref|XP_001109364.1| PREDICTED: simila ( 260) 505 112.3 9.1e-23 gi|50949427|emb|CAH10595.1| hypothetical protein [ ( 103) 499 110.8 1e-22 gi|114640974|ref|XP_001139406.1| PREDICTED: hypoth ( 260) 502 111.7 1.4e-22 gi|114640972|ref|XP_001139000.1| PREDICTED: hypoth ( 264) 502 111.7 1.4e-22 gi|62897431|dbj|BAD96656.1| transforming growth fa ( 260) 498 110.8 2.5e-22 gi|90078296|dbj|BAE88828.1| unnamed protein produc ( 94) 479 106.6 1.6e-21 gi|126327221|ref|XP_001364585.1| PREDICTED: simila ( 260) 482 107.6 2.4e-21 gi|47207954|emb|CAF90838.1| unnamed protein produc ( 233) 458 102.6 6.5e-20 gi|110331891|gb|ABG67051.1| transforming growth fa ( 185) 456 102.2 7.2e-20 gi|160773695|gb|AAI55064.1| Zgc:171428 protein [Da ( 511) 426 96.3 1.1e-17 gi|73954587|ref|XP_858949.1| PREDICTED: similar to ( 260) 418 94.5 2.1e-17 gi|133737014|gb|AAI33783.1| LOC100049131 protein [ ( 409) 395 89.9 7.6e-16 gi|82181179|sp|Q66IH2.1|TBRG1_XENTR RecName: Full= ( 409) 381 87.1 5.5e-15 gi|210106312|gb|EEA54301.1| hypothetical protein B ( 641) 273 65.1 3.5e-08 gi|210109441|gb|EEA57313.1| hypothetical protein B ( 641) 271 64.7 4.6e-08 gi|16553676|dbj|BAB71559.1| unnamed protein produc ( 123) 259 61.8 7e-08 gi|108877916|gb|EAT42141.1| conserved hypothetical ( 385) 240 58.2 2.5e-06 gi|156219087|gb|EDO39974.1| predicted protein [Nem ( 693) 242 58.8 3e-06 gi|167878155|gb|EDS41538.1| transforming growth fa ( 413) 236 57.4 4.7e-06 gi|116123170|gb|EAL39651.2| AGAP008108-PA [Anophel ( 108) 217 53.1 2.4e-05 gi|115707380|ref|XP_789786.2| PREDICTED: similar t ( 560) 218 53.9 7.6e-05 gi|115953991|ref|XP_001187893.1| PREDICTED: simila ( 582) 218 53.9 7.8e-05 gi|115908774|ref|XP_790301.2| PREDICTED: similar t ( 601) 218 53.9 8e-05 >>gi|47847472|dbj|BAD21408.1| mFLJ00213 protein [Mus mus (279 aa) initn: 1853 init1: 1853 opt: 1853 Z-score: 2054.0 bits: 387.9 E(): 1.1e-105 Smith-Waterman score: 1853; 100.000% identity (100.000% similar) in 279 aa overlap (1-279:1-279) 10 20 30 40 50 60 mFLJ00 LGKSTGKCRGSPSVSACAPSPPRPGAPEPGLIMSVLSGLASEPRTPLSSKARMKRLPRKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 LGKSTGKCRGSPSVSACAPSPPRPGAPEPGLIMSVLSGLASEPRTPLSSKARMKRLPRKS 10 20 30 40 50 60 70 80 90 100 110 120 mFLJ00 QNEKYRLKYLRLRRAAKATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 QNEKYRLKYLRLRRAAKATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEG 70 80 90 100 110 120 130 140 150 160 170 180 mFLJ00 EPQAAAPSHSSSLPLPYGVTSSVGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLECP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 EPQAAAPSHSSSLPLPYGVTSSVGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLECP 130 140 150 160 170 180 190 200 210 220 230 240 mFLJ00 LVHSYQWVKFDACKPRKGQLSQELPENDATMSLEAFQTQTFDDDHDDSILPGSLDLTELQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 LVHSYQWVKFDACKPRKGQLSQELPENDATMSLEAFQTQTFDDDHDDSILPGSLDLTELQ 190 200 210 220 230 240 250 260 270 mFLJ00 HEAFVSSYQPEFLTHEPLVDTDLQHLKSPSQCSPIQSSD ::::::::::::::::::::::::::::::::::::::: gi|478 HEAFVSSYQPEFLTHEPLVDTDLQHLKSPSQCSPIQSSD 250 260 270 >>gi|148693492|gb|EDL25439.1| transforming growth factor (226 aa) initn: 1109 init1: 1109 opt: 1109 Z-score: 1233.2 bits: 235.7 E(): 5.5e-60 Smith-Waterman score: 1109; 100.000% identity (100.000% similar) in 171 aa overlap (8-178:1-171) 10 20 30 40 50 60 mFLJ00 LGKSTGKCRGSPSVSACAPSPPRPGAPEPGLIMSVLSGLASEPRTPLSSKARMKRLPRKS ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CRGSPSVSACAPSPPRPGAPEPGLIMSVLSGLASEPRTPLSSKARMKRLPRKS 10 20 30 40 50 70 80 90 100 110 120 mFLJ00 QNEKYRLKYLRLRRAAKATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QNEKYRLKYLRLRRAAKATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEG 60 70 80 90 100 110 130 140 150 160 170 180 mFLJ00 EPQAAAPSHSSSLPLPYGVTSSVGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLECP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EPQAAAPSHSSSLPLPYGVTSSVGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLEVL 120 130 140 150 160 170 190 200 210 220 230 240 mFLJ00 LVHSYQWVKFDACKPRKGQLSQELPENDATMSLEAFQTQTFDDDHDDSILPGSLDLTELQ gi|148 KKTSKKKKMEGGARKLVRPIALDPSGQPVFPIGLGGLTVYSLGEVSETSIWPG 180 190 200 210 220 >>gi|12847853|dbj|BAB27734.1| unnamed protein product [M (152 aa) initn: 919 init1: 919 opt: 919 Z-score: 1025.7 bits: 196.7 E(): 2e-48 Smith-Waterman score: 919; 100.000% identity (100.000% similar) in 146 aa overlap (33-178:1-146) 10 20 30 40 50 60 mFLJ00 KSTGKCRGSPSVSACAPSPPRPGAPEPGLIMSVLSGLASEPRTPLSSKARMKRLPRKSQN :::::::::::::::::::::::::::::: gi|128 MSVLSGLASEPRTPLSSKARMKRLPRKSQN 10 20 30 70 80 90 100 110 120 mFLJ00 EKYRLKYLRLRRAAKATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 EKYRLKYLRLRRAAKATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEP 40 50 60 70 80 90 130 140 150 160 170 180 mFLJ00 QAAAPSHSSSLPLPYGVTSSVGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLECPLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|128 QAAAPSHSSSLPLPYGVTSSVGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLEVLKK 100 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 HSYQWVKFDACKPRKGQLSQELPENDATMSLEAFQTQTFDDDHDDSILPGSLDLTELQHE gi|128 TS >>gi|74151466|dbj|BAE38845.1| unnamed protein product [M (406 aa) initn: 1545 init1: 919 opt: 919 Z-score: 1019.8 bits: 197.1 E(): 4.3e-48 Smith-Waterman score: 1248; 59.852% identity (60.591% similar) in 406 aa overlap (33-279:1-406) 10 20 30 40 50 60 mFLJ00 KSTGKCRGSPSVSACAPSPPRPGAPEPGLIMSVLSGLASEPRTPLSSKARMKRLPRKSQN :::::::::::::::::::::::::::::: gi|741 MSVLSGLASEPRTPLSSKARMKRLPRKSQN 10 20 30 70 80 90 100 110 120 mFLJ00 EKYRLKYLRLRRAAKATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EKYRLKYLRLRRAAKATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEP 40 50 60 70 80 90 130 140 150 160 170 mFLJ00 QAAAPSHSSSLPLPYGVTSSVGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLE---- :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 QAAAPSHSSSLPLPYGVTSSVGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLEVLKK 100 110 120 130 140 150 mFLJ00 ------------------------------------------------------------ gi|741 TSKKKKMEGGARKLVRPIALDPSGQPVFPIGLGGLTVYSLGEIITNRPGFHDENAIYPVG 160 170 180 190 200 210 180 mFLJ00 -----------CP----------------------------------------------- :: gi|741 YCSTRVYASMKCPDQKCLYTCQIKDGGVQPQFEIVPEDDPQNTIVGSSADACYEELLRAI 220 230 240 250 260 270 190 200 mFLJ00 ----------------------------LVHS---------YQWVKFDACKPRKGQLSQE :..: ::::::::::::::::::: gi|741 GATTGKLMPNPLSCGADFFGFSHPTIHNLIQSCPEAQNCVNYQWVKFDACKPRKGQLSQE 280 290 300 310 320 330 210 220 230 240 250 260 mFLJ00 LPENDATMSLEAFQTQTFDDDHDDSILPGSLDLTELQHEAFVSSYQPEFLTHEPLVDTDL ::::::::::::::::::::::::::::::::: :::::::::::::::::.:::::::: gi|741 LPENDATMSLEAFQTQTFDDDHDDSILPGSLDLPELQHEAFVSSYQPEFLTYEPLVDTDL 340 350 360 370 380 390 270 mFLJ00 QHLKSPSQCSPIQSSD :::::::::::::::: gi|741 QHLKSPSQCSPIQSSD 400 >>gi|74185221|dbj|BAE30090.1| unnamed protein product [M (406 aa) initn: 1553 init1: 919 opt: 919 Z-score: 1019.8 bits: 197.1 E(): 4.3e-48 Smith-Waterman score: 1256; 60.099% identity (60.591% similar) in 406 aa overlap (33-279:1-406) 10 20 30 40 50 60 mFLJ00 KSTGKCRGSPSVSACAPSPPRPGAPEPGLIMSVLSGLASEPRTPLSSKARMKRLPRKSQN :::::::::::::::::::::::::::::: gi|741 MSVLSGLASEPRTPLSSKARMKRLPRKSQN 10 20 30 70 80 90 100 110 120 mFLJ00 EKYRLKYLRLRRAAKATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EKYRLKYLRLRRAAKATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEP 40 50 60 70 80 90 130 140 150 160 170 mFLJ00 QAAAPSHSSSLPLPYGVTSSVGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLE---- :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 QAAAPSHSSSLPLPYGVTSSVGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLEVLKK 100 110 120 130 140 150 mFLJ00 ------------------------------------------------------------ gi|741 TSKKKKMEGGARKLVRPIALDPSGQPVFPTGLGGLTVCSLGEIITNRPGFHDENAIYPVG 160 170 180 190 200 210 180 mFLJ00 -----------CP----------------------------------------------- :: gi|741 YCSTRVYASMKCPDQKCPYTCQIKDGGVQPQFEIVPEDDPQNTIVGSSADACYEELLRAI 220 230 240 250 260 270 190 200 mFLJ00 ----------------------------LVHS---------YQWVKFDACKPRKGQLSQE :..: ::::::::::::::::::: gi|741 SATTGKLMPNPLSCGADFFGFSHPTIHNLIQSCPEAQNCVNYQWVKFDACKPRKGQLSQE 280 290 300 310 320 330 210 220 230 240 250 260 mFLJ00 LPENDATMSLEAFQTQTFDDDHDDSILPGSLDLTELQHEAFVSSYQPEFLTHEPLVDTDL ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|741 LPENDATMSLEAFQTQTFDDDHDDSILPGSLDLPELQHEAFVSSYQPEFLTHEPLVDTDL 340 350 360 370 380 390 270 mFLJ00 QHLKSPSQCSPIQSSD :::::::::::::::: gi|741 QHLKSPSQCSPIQSSD 400 >>gi|125991204|sp|Q3UB74.2|TBRG1_MOUSE RecName: Full=Tra (406 aa) initn: 1553 init1: 919 opt: 919 Z-score: 1019.8 bits: 197.1 E(): 4.3e-48 Smith-Waterman score: 1256; 60.099% identity (60.591% similar) in 406 aa overlap (33-279:1-406) 10 20 30 40 50 60 mFLJ00 KSTGKCRGSPSVSACAPSPPRPGAPEPGLIMSVLSGLASEPRTPLSSKARMKRLPRKSQN :::::::::::::::::::::::::::::: gi|125 MSVLSGLASEPRTPLSSKARMKRLPRKSQN 10 20 30 70 80 90 100 110 120 mFLJ00 EKYRLKYLRLRRAAKATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 EKYRLKYLRLRRAAKATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEP 40 50 60 70 80 90 130 140 150 160 170 mFLJ00 QAAAPSHSSSLPLPYGVTSSVGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLE---- :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|125 QAAAPSHSSSLPLPYGVTSSVGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLEVLKK 100 110 120 130 140 150 mFLJ00 ------------------------------------------------------------ gi|125 TSKKKKMEGGARKLVRPIALDPSGQPVFPIGLGGLTVYSLGEIITNRPGFHDENAIYPVG 160 170 180 190 200 210 180 mFLJ00 -----------CP----------------------------------------------- :: gi|125 YCSTRVYASMKCPDQKCLYTCQIKDGGVQPQFEIVPEDDPQNTIVGSSADACYEELLRAI 220 230 240 250 260 270 190 200 mFLJ00 ----------------------------LVHS---------YQWVKFDACKPRKGQLSQE :..: ::::::::::::::::::: gi|125 SATTGKLMPNPLSCGADFFGFSHPTIHNLIQSCPEAQNCVNYQWVKFDACKPRKGQLSQE 280 290 300 310 320 330 210 220 230 240 250 260 mFLJ00 LPENDATMSLEAFQTQTFDDDHDDSILPGSLDLTELQHEAFVSSYQPEFLTHEPLVDTDL ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|125 LPENDATMSLEAFQTQTFDDDHDDSILPGSLDLPELQHEAFVSSYQPEFLTHEPLVDTDL 340 350 360 370 380 390 270 mFLJ00 QHLKSPSQCSPIQSSD :::::::::::::::: gi|125 QHLKSPSQCSPIQSSD 400 >>gi|74151716|dbj|BAE29651.1| unnamed protein product [M (406 aa) initn: 1545 init1: 911 opt: 911 Z-score: 1010.9 bits: 195.4 E(): 1.3e-47 Smith-Waterman score: 1248; 59.852% identity (60.345% similar) in 406 aa overlap (33-279:1-406) 10 20 30 40 50 60 mFLJ00 KSTGKCRGSPSVSACAPSPPRPGAPEPGLIMSVLSGLASEPRTPLSSKARMKRLPRKSQN :::::::::::::::::::::::::::::: gi|741 MSVLSGLASEPRTPLSSKARMKRLPRKSQN 10 20 30 70 80 90 100 110 120 mFLJ00 EKYRLKYLRLRRAAKATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEP : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 EMYRLKYLRLRRAAKATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEP 40 50 60 70 80 90 130 140 150 160 170 mFLJ00 QAAAPSHSSSLPLPYGVTSSVGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLE---- :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 QAAAPSHSSSLPLPYGVTSSVGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLEVLKK 100 110 120 130 140 150 mFLJ00 ------------------------------------------------------------ gi|741 TSKKKKMEGGARKLVRPIALDPSGQPVFPIGLGGLTVYSLGEIITNRPGFHDENAINPVG 160 170 180 190 200 210 180 mFLJ00 -----------CP----------------------------------------------- :: gi|741 YCSTRVYASMKCPDQKCLYTCQIKDGGVQPQFEIVPEDDPQNTIVGSSADACYEELLRAI 220 230 240 250 260 270 190 200 mFLJ00 ----------------------------LVHS---------YQWVKFDACKPRKGQLSQE :..: ::::::::::::::::::: gi|741 SATTGKLMPNPLSCGADFFGFSHPTIHNLIQSCPEAQNCVNYQWVKFDACKPRKGQLSQE 280 290 300 310 320 330 210 220 230 240 250 260 mFLJ00 LPENDATMSLEAFQTQTFDDDHDDSILPGSLDLTELQHEAFVSSYQPEFLTHEPLVDTDL ::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::: gi|741 LPENDATMSLEAFQTQTFDDDHDDSILPGSLDLPELQHEAFVSSYQPEFLTHEPLVDTDL 340 350 360 370 380 390 270 mFLJ00 QHLKSPSQCSPIQSSD :::::::::::::::: gi|741 QHLKSPSQCSPIQSSD 400 >>gi|125991205|sp|Q5PQK8.2|TBRG1_RAT RecName: Full=Trans (406 aa) initn: 1505 init1: 890 opt: 890 Z-score: 987.7 bits: 191.1 E(): 2.6e-46 Smith-Waterman score: 1208; 57.882% identity (60.099% similar) in 406 aa overlap (33-279:1-406) 10 20 30 40 50 60 mFLJ00 KSTGKCRGSPSVSACAPSPPRPGAPEPGLIMSVLSGLASEPRTPLSSKARMKRLPRKSQN :::::::::::::::::::::::::.:.:: gi|125 MSVLSGLASEPRTPLSSKARMKRLPKKNQN 10 20 30 70 80 90 100 110 120 mFLJ00 EKYRLKYLRLRRAAKATVFENASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEP ::::::::::::::::::::::..:::::::::::::::::::::::::::::::::::: gi|125 EKYRLKYLRLRRAAKATVFENAAVCDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEP 40 50 60 70 80 90 130 140 150 160 170 mFLJ00 QAAAPSHSSSLPLPYGVTSSVGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLE---- ::::::::::::: :::::::::.:::::::::::::::::::::::::::::::: gi|125 QAAAPSHSSSLPLAYGVTSSVGTIQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLEVLKK 100 110 120 130 140 150 mFLJ00 ------------------------------------------------------------ gi|125 TSKRKKMEGGARKLVRPIALDPSGQPVFPIGLGGLTVYSLGEIITNRPGFHDENAIYPVG 160 170 180 190 200 210 180 mFLJ00 -----------CP----------------------------------------------- :: gi|125 YCSTRVYASMKCPDQKCLYTCQIKDGGVQPQFEIVPEDDPRNTIVGSSADACYEELLRAI 220 230 240 250 260 270 190 200 mFLJ00 ----------------------------LVHS---------YQWVKFDACKPRKGQLSQE :..: ::::::::::::::::::: gi|125 SAATGKLMPNPLSCGADFFGFSHPTIHNLIQSCPEAQNCVNYQWVKFDACKPRKGQLSQE 280 290 300 310 320 330 210 220 230 240 250 260 mFLJ00 LPENDATMSLEAFQTQTFDDDHDDSILPGSLDLTELQHEAFVSSYQPEFLTHEPLVDTDL ::::::.:::::: ::::::::.:::::::::: :::::::::::::::::::::::::: gi|125 LPENDAAMSLEAFPTQTFDDDHEDSILPGSLDLPELQHEAFVSSYQPEFLTHEPLVDTDL 340 350 360 370 380 390 270 mFLJ00 QHLKSPSQCSPIQSSD :::::::::::::::: gi|125 QHLKSPSQCSPIQSSD 400 >>gi|112180481|gb|AAH43022.3| Transforming growth factor (386 aa) initn: 798 init1: 798 opt: 798 Z-score: 886.4 bits: 172.3 E(): 1.2e-40 Smith-Waterman score: 1135; 58.031% identity (58.549% similar) in 386 aa overlap (53-279:1-386) 30 40 50 60 70 80 mFLJ00 RPGAPEPGLIMSVLSGLASEPRTPLSSKARMKRLPRKSQNEKYRLKYLRLRRAAKATVFE :::::::::::::::::::::::::::::: gi|112 MKRLPRKSQNEKYRLKYLRLRRAAKATVFE 10 20 30 90 100 110 120 130 140 mFLJ00 NASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEPQAAAPSHSSSLPLPYGVTSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 NASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEPQAAAPSHSSSLPLPYGVTSS 40 50 60 70 80 90 150 160 170 mFLJ00 VGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLE------------------------ :::::::::::::::::::::::::::::::::::: gi|112 VGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLEVLKKTSKKKKMEGGARKLVRPIAL 100 110 120 130 140 150 180 mFLJ00 ---------------------------------------------------CP------- :: gi|112 DPSGQPVFPIGLGGLTVYSLGEIITNRPGFHDENAIYPVGYCSTRVYASMKCPDQKCLYT 160 170 180 190 200 210 mFLJ00 ------------------------------------------------------------ gi|112 CQIKDGGVQPQFEIVPEDDPQNTIVGSSADACYEELLRAISATTGKLMPNPLSCGADFFG 220 230 240 250 260 270 190 200 210 220 mFLJ00 --------LVHS---------YQWVKFDACKPRKGQLSQELPENDATMSLEAFQTQTFDD :..: ::::::::::::::::::::::::::::::::::::::: gi|112 FSHPTIHNLIQSCLEAQNCVNYQWVKFDACKPRKGQLSQELPENDATMSLEAFQTQTFDD 280 290 300 310 320 330 230 240 250 260 270 mFLJ00 DHDDSILPGSLDLTELQHEAFVSSYQPEFLTHEPLVDTDLQHLKSPSQCSPIQSSD ::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|112 DHDDSILPGSLDLPELQHEAFVSSYQPEFLTHEPLVDTDLQHLKSPSQCSPIQSSD 340 350 360 370 380 >>gi|41351146|gb|AAH65795.1| Transforming growth factor (386 aa) initn: 1432 init1: 798 opt: 798 Z-score: 886.4 bits: 172.3 E(): 1.2e-40 Smith-Waterman score: 1135; 58.031% identity (58.549% similar) in 386 aa overlap (53-279:1-386) 30 40 50 60 70 80 mFLJ00 RPGAPEPGLIMSVLSGLASEPRTPLSSKARMKRLPRKSQNEKYRLKYLRLRRAAKATVFE :::::::::::::::::::::::::::::: gi|413 MKRLPRKSQNEKYRLKYLRLRRAAKATVFE 10 20 30 90 100 110 120 130 140 mFLJ00 NASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEPQAAAPSHSSSLPLPYGVTSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|413 NASICDEIARLEEKFLKAKEERRYLLKKLLQIHALTEGEPQAAAPSHSSSLPLPYGVTSS 40 50 60 70 80 90 150 160 170 mFLJ00 VGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLE------------------------ :::::::::::::::::::::::::::::::::::: gi|413 VGTMQGAGPSTGAEEPFAKKSKKEKKEKGKENSKLEVLKKTSKKKKMEGGARKLVRPIAL 100 110 120 130 140 150 180 mFLJ00 ---------------------------------------------------CP------- :: gi|413 DPSGQPVFPIGLGGLTVYSLGEIITNRPGFHDENAIYPVGYCSTRVYASMKCPDQKCLYT 160 170 180 190 200 210 mFLJ00 ------------------------------------------------------------ gi|413 CQIKDGGVQPQFEIVPEDDPQNTIVGSSADACYEELLRAISATTGKLMPNPLSCGADFFG 220 230 240 250 260 270 190 200 210 220 mFLJ00 --------LVHS---------YQWVKFDACKPRKGQLSQELPENDATMSLEAFQTQTFDD :..: ::::::::::::::::::::::::::::::::::::::: gi|413 FSHPTIHNLIQSCPEAQNCVNYQWVKFDACKPRKGQLSQELPENDATMSLEAFQTQTFDD 280 290 300 310 320 330 230 240 250 260 270 mFLJ00 DHDDSILPGSLDLTELQHEAFVSSYQPEFLTHEPLVDTDLQHLKSPSQCSPIQSSD ::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|413 DHDDSILPGSLDLPELQHEAFVSSYQPEFLTHEPLVDTDLQHLKSPSQCSPIQSSD 340 350 360 370 380 279 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 00:08:04 2009 done: Fri Mar 13 00:13:34 2009 Total Scan time: 768.580 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]