FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1550.ptfa, 199 aa vs ./tmplib.26680 library 1768818 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 2.9577+/-0.00401; mu= 21.1325+/- 0.269 mean_var=69.9312+/-16.064, 0's: 0 Z-trim: 7 B-trim: 56 in 1/35 Lambda= 0.1534 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0463 ( 1529 res) mbg07539 (1529) 1137 261 1.6e-70 mKIAA4053 ( 1400 res) mbg07434 (1400) 1119 257 2.4e-69 mKIAA4078 ( 609 res) mic26093 ( 609) 1090 250 1.4e-67 mKIAA0620 ( 1746 res) mpf00920 (1746) 737 173 7.5e-44 mKIAA0315 ( 1299 res) mbg03309 (1299) 731 171 1.6e-43 mKIAA0407 ( 1207 res) mpm02292 (1207) 692 163 6.3e-41 mKIAA1206 ( 1374 res) mbg00219 (1374) 643 152 1.2e-37 >>mKIAA0463 ( 1529 res) mbg07539 (1529 aa) initn: 1137 init1: 1137 opt: 1137 Z-score: 1358.4 bits: 261.2 E(): 1.6e-70 Smith-Waterman score: 1137; 81.910% identity (81.910% ungapped) in 199 aa overlap (1-199:1331-1529) 10 20 30 mKIAA1 FETIFSTAHRGSALPLAIKYMFDFLDEQAD :::.:::.:::::::::::::::::::::: mKIAA0 GDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETLFSTVHRGSALPLAIKYMFDFLDEQAD 1310 1320 1330 1340 1350 1360 40 50 60 70 80 90 mKIAA1 KHGIHDPHVRHTWKSNCLPLRFWVNMIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTS .:.::: :::::::::::::::::.::::::::::::.::::::::::::::::::::: mKIAA0 RHSIHDTDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKGSITDACLSVVAQTFMDSCSTS 1370 1380 1390 1400 1410 1420 100 110 120 130 140 150 mKIAA1 EHRLGKDSPSNKLLYAKDIPSYKNWVERYYSDIGKMPAISDQDMNAYLAEQSRMHMNEFN ::::::::::::::::::::::::::::::.::.:.:::::::::::::::::.: .::: mKIAA0 EHRLGKDSPSNKLLYAKDIPSYKNWVERYYADIAKLPAISDQDMNAYLAEQSRLHATEFN 1430 1440 1450 1460 1470 1480 160 170 180 190 mKIAA1 TMSALSEIFSYVGKYSEEILGPLDHDDQCGKQKLAYKLEQVITLMSLDS .:::.::.:::.:::::..: :..:.: .:.::::.:..:. ::..: mKIAA0 MLSALNEIYSYVSKYSEELIGALEQDEQARRQRLAYKVEHLINAMSIES 1490 1500 1510 1520 >>mKIAA4053 ( 1400 res) mbg07434 (1400 aa) initn: 1119 init1: 1119 opt: 1119 Z-score: 1337.2 bits: 257.1 E(): 2.4e-69 Smith-Waterman score: 1119; 81.407% identity (81.407% ungapped) in 199 aa overlap (1-199:1202-1400) 10 20 30 mKIAA1 FETIFSTAHRGSALPLAIKYMFDFLDEQAD :::::::::::::::::::::::::::::: mKIAA4 GDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQAD 1180 1190 1200 1210 1220 1230 40 50 60 70 80 90 mKIAA1 KHGIHDPHVRHTWKSNCLPLRFWVNMIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTS :: ::: :::::::::::::::::.:::::::::::::::::::::::::::::::::: mKIAA4 KHQIHDSDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTS 1240 1250 1260 1270 1280 1290 100 110 120 130 140 150 mKIAA1 EHRLGKDSPSNKLLYAKDIPSYKNWVERYYSDIGKMPAISDQDMNAYLAEQSRMHMNEFN ::.:::::::::::::::::.::.::::::.::.::::::::::.::::::::.:...:: mKIAA4 EHKLGKDSPSNKLLYAKDIPNYKSWVERYYADIAKMPAISDQDMSAYLAEQSRLHLSQFN 1300 1310 1320 1330 1340 1350 160 170 180 190 mKIAA1 TMSALSEIFSYVGKYSEEILGPLDHDDQCGKQKLAYKLEQVITLMSLDS .:::: ::.::..::..::: :..:.: .:.: :::::. :.:.: mKIAA4 SMSALHEIYSYIAKYKDEILVALEKDEQARRQRLRSKLEQVVDTMALSS 1360 1370 1380 1390 1400 >>mKIAA4078 ( 609 res) mic26093 (609 aa) initn: 1090 init1: 1090 opt: 1090 Z-score: 1305.5 bits: 250.0 E(): 1.4e-67 Smith-Waterman score: 1090; 80.402% identity (80.402% ungapped) in 199 aa overlap (1-199:411-609) 10 20 30 mKIAA1 FETIFSTAHRGSALPLAIKYMFDFLDEQAD :::.:::::::::::::::::::::::::: mKIAA4 GDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETVFSTAHRGSALPLAIKYMFDFLDEQAD 390 400 410 420 430 440 40 50 60 70 80 90 mKIAA1 KHGIHDPHVRHTWKSNCLPLRFWVNMIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTS .. : :: :::::::::::::::::.:::::::::::::::::::::::::::::::::: mKIAA4 QRQISDPDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTS 450 460 470 480 490 500 100 110 120 130 140 150 mKIAA1 EHRLGKDSPSNKLLYAKDIPSYKNWVERYYSDIGKMPAISDQDMNAYLAEQSRMHMNEFN ::::::::::::::::::::.::.:::::: ::.:: .::::::.:::.::::.: :.:: mKIAA4 EHRLGKDSPSNKLLYAKDIPNYKSWVERYYRDIAKMASISDQDMDAYLVEQSRLHANDFN 510 520 530 540 550 560 160 170 180 190 mKIAA1 TMSALSEIFSYVGKYSEEILGPLDHDDQCGKQKLAYKLEQVITLMSLDS ..:::::.. :: :: .::: ::.: .: :.:: ::::.:::.: .: mKIAA4 VLSALSELYFYVTKYRQEILTSLDRDASCRKHKLRQKLEQIITLVSSSS 570 580 590 600 >>mKIAA0620 ( 1746 res) mpf00920 (1746 aa) initn: 733 init1: 733 opt: 737 Z-score: 879.6 bits: 172.8 E(): 7.5e-44 Smith-Waterman score: 737; 54.872% identity (55.440% ungapped) in 195 aa overlap (1-195:1543-1735) 10 20 30 mKIAA1 FETIFSTAHRGSALPLAIKYMFDFLDEQAD :..:.: : . :::.::.::::.:::. mKIAA0 QSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSI--REDKPPLAVKYFFDFLEEQAE 1520 1530 1540 1550 1560 1570 40 50 60 70 80 90 mKIAA1 KHGIHDPHVRHTWKSNCLPLRFWVNMIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTS :.:: :: . : ::.: ::::::::..:::::::::.:.. ::::::.::.:.:.:: : mKIAA0 KRGISDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIEKTDHIDACLSVIAQAFIDACSIS 1580 1590 1600 1610 1620 1630 100 110 120 130 140 150 mKIAA1 EHRLGKDSPSNKLLYAKDIPSYKNWVERYYSDIGKMPAISDQDMNAYLAEQSRMHMNEFN . .::::::.:::::::.:: :.. :.:::..: : .:.:.:::.:::.:: ..:::: mKIAA0 DLQLGKDSPTNKLLYAKEIPEYRKTVQRYYKQIQDMTPLSEQEMNAHLAEESRKYQNEFN 1640 1650 1660 1670 1680 1690 160 170 180 190 mKIAA1 TMSALSEIFSYVGKYSEEILGPLDHDDQCGKQKLAYKLEQVITLMSLDS : :..::..:. .: .:.. :. . . .: .:.:::..:: mKIAA0 TNVAMAEIYKYAKRYRPQIMAALEANPTARRTQLQHKFEQVVALMENNIYECYSEA 1700 1710 1720 1730 1740 >>mKIAA0315 ( 1299 res) mbg03309 (1299 aa) initn: 699 init1: 699 opt: 731 Z-score: 873.5 bits: 171.2 E(): 1.6e-43 Smith-Waterman score: 731; 52.880% identity (53.723% ungapped) in 191 aa overlap (1-191:1101-1288) 10 20 30 mKIAA1 FETIFSTAHRGSALPLAIKYMFDFLDEQAD :..... .: :.: :.::.::::::::. mKIAA0 EKERTKAITEIYLTRLLSVKGTLQQFVDNFFQSVLAPGH---AVPPAVKYFFDFLDEQAE 1080 1090 1100 1110 1120 40 50 60 70 80 90 mKIAA1 KHGIHDPHVRHTWKSNCLPLRFWVNMIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTS :: :.: . : ::.: ::::::::..:::.:.::.: . ..:: :::.::::::.:. . mKIAA0 KHDIRDEDTIHIWKTNSLPLRFWVNILKNPHFIFDVHVHEVVDASLSVIAQTFMDACTRT 1130 1140 1150 1160 1170 1180 100 110 120 130 140 150 mKIAA1 EHRLGKDSPSNKLLYAKDIPSYKNWVERYYSDIGKMPAISDQDMNAYLAEQSRMHMNEFN ::.:..:::::::::::.: .::. :: ::. : .: .::::::..::: :: : . .: mKIAA0 EHKLSRDSPSNKLLYAKEISTYKKMVEDYYKGIRQMVQVSDQDMNTHLAEISRAHTDSLN 1190 1200 1210 1220 1230 1240 160 170 180 190 mKIAA1 TMSALSEIFSYVGKYSEEILGPLDHDDQCGKQKLAYKLEQVITLMSLDS :. :: ....:. :: .::.. :..: :..::..:.:. mKIAA0 TLVALHQLYQYTQKYYDEIINALEEDPAAQKMQLAFRLQQIAAALENKVTDL 1250 1260 1270 1280 1290 >>mKIAA0407 ( 1207 res) mpm02292 (1207 aa) initn: 644 init1: 644 opt: 692 Z-score: 827.1 bits: 162.5 E(): 6.3e-41 Smith-Waterman score: 692; 51.832% identity (52.660% ungapped) in 191 aa overlap (1-191:1009-1196) 10 20 30 mKIAA1 FETIFSTAHRGSALPLAIKYMFDFLDEQAD :..:.::.. .:::.::.::.:::::. mKIAA0 ERERAKAIPEIYLTRLLSMKGTLQKFVDDLFQVILSTSR---PVPLAVKYFFDLLDEQAQ 980 990 1000 1010 1020 1030 40 50 60 70 80 90 mKIAA1 KHGIHDPHVRHTWKSNCLPLRFWVNMIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTS .::: : . : ::.: ::::::.:.:::::::::.. .. :: : :.::::::.:. . mKIAA0 QHGISDQDTIHIWKTNSLPLRFWINIIKNPQFVFDVQTSDNMDAVLLVIAQTFMDACTLA 1040 1050 1060 1070 1080 1090 100 110 120 130 140 150 mKIAA1 EHRLGKDSPSNKLLYAKDIPSYKNWVERYYSDIGKMPAISDQDMNAYLAEQSRMHMNEFN .:.::.::: ::::::.::: ::. :::::.:: . :::.::. ::: :: ... mKIAA0 DHKLGRDSPINKLLYARDIPRYKQMVERYYADIRQTVPASDQEMNSVLAELSRNCSADLG 1100 1110 1120 1130 1140 1150 160 170 180 190 mKIAA1 TMSALSEIFSYVGKYSEEILGPLDHDDQCGKQKLAYKLEQVITLMSLDS . :: :...:..:: ..:. :..: :..:.:.:.:. mKIAA0 ARVALHELYKYINKYYDQIITALEEDGTAQKMQLGYRLQQIAAAVENKVTDL 1160 1170 1180 1190 1200 >>mKIAA1206 ( 1374 res) mbg00219 (1374 aa) initn: 641 init1: 619 opt: 643 Z-score: 768.1 bits: 151.8 E(): 1.2e-37 Smith-Waterman score: 643; 47.692% identity (48.438% ungapped) in 195 aa overlap (1-195:1176-1367) 10 20 30 mKIAA1 FETIFSTAHRGSALPLAIKYMFDFLDEQAD :..:.: . .:.:.::.:::::: :. mKIAA1 ERSRAKAIPEIYLTRLLSMKGTLQKFVDDTFQAILSMNR---PVPIAVKYLFDFLDELAE 1150 1160 1170 1180 1190 1200 40 50 60 70 80 90 mKIAA1 KHGIHDPHVRHTWKSNCLPLRFWVNMIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTS ::::.::.. : ::.: : ::::::..::::..::.. .. :: :.:.::::.::: .: mKIAA1 KHGIEDPETLHIWKTNSLLLRFWVNVLKNPQLIFDVQVSDNEDAILAVIAQTFIDSCMVS 1210 1220 1230 1240 1250 1260 100 110 120 130 140 150 mKIAA1 EHRLGKDSPSNKLLYAKDIPSYKNWVERYYSDIGKMPAISDQDMNAYLAEQSRMHMNEFN ::..:.::: ::::::..:: ::. ::.::.:: . : :.::. ::: : . . . mKIAA1 EHKVGRDSPVNKLLYAREIPRYKQMVEKYYADIRQSSPASYQEMNSALAELSGNYSSAPH 1270 1280 1290 1300 1310 1320 160 170 180 190 mKIAA1 TMSALSEIFSYVGKYSEEILGPLDHDDQCGKQKLAYKLEQVITLMSLDS . :: :..... .: ..:.. :..: :..:: .:.:: .:. mKIAA1 CLEALRELYNHIHRYYDQIISALEEDPVAQKMQLACRLQQVAALVEYKVTDL 1330 1340 1350 1360 1370 199 residues in 1 query sequences 1768818 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:47:56 2006 done: Mon Mar 27 10:47:56 2006 Scan time: 0.360 Display time: 0.070 Function used was FASTA [version 3.4t11 Apr 17, 2002]