# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj03079.fasta.nr -Q ../query/mKIAA0380.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mKIAA0380, 653 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7916649 sequences
Expectation_n fit: rho(ln(x))= 6.0321+/-0.000193; mu= 9.2389+/- 0.011
mean_var=98.6750+/-18.956, 0's: 36 Z-trim: 47 B-trim: 396 in 2/66
Lambda= 0.129113
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 38, opt: 26, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|51260874|gb|AAH79565.1| Rho guanine nucleotide (1552) 4346 820.3 0
gi|148683406|gb|EDL15353.1| Rho guanine nucleotide (1388) 4328 817.0 0
gi|74178679|dbj|BAE34007.1| unnamed protein produc (1476) 4023 760.2 1.1e-216
gi|149048200|gb|EDM00776.1| Rho guanine nucleotide (1432) 3907 738.5 3.5e-210
gi|34395514|sp|Q9ES67.1|ARHGB_RAT RecName: Full=Rh (1527) 3907 738.6 3.7e-210
gi|149048199|gb|EDM00775.1| Rho guanine nucleotide (1385) 3881 733.7 9.8e-209
gi|109017416|ref|XP_001116835.1| PREDICTED: Rho gu (1522) 3272 620.3 1.5e-174
gi|109017414|ref|XP_001116843.1| PREDICTED: Rho gu (1562) 3272 620.3 1.5e-174
gi|221044102|dbj|BAH13728.1| unnamed protein produ ( 938) 3228 611.9 3e-172
gi|34395516|sp|O15085.1|ARHGB_HUMAN RecName: Full= (1522) 3227 611.9 5e-172
gi|35505340|gb|AAH57394.1| Rho guanine nucleotide (1562) 3227 611.9 5.1e-172
gi|114560374|ref|XP_001167782.1| PREDICTED: Rho gu (1522) 3220 610.6 1.2e-171
gi|114560372|ref|XP_513900.2| PREDICTED: Rho guani (1562) 3220 610.6 1.3e-171
gi|119573278|gb|EAW52893.1| Rho guanine nucleotide (1522) 3217 610.0 1.8e-171
gi|119573277|gb|EAW52892.1| Rho guanine nucleotide (1562) 3217 610.0 1.8e-171
gi|194210652|ref|XP_001495570.2| PREDICTED: simila (1558) 3214 609.5 2.7e-171
gi|194035955|ref|XP_001927750.1| PREDICTED: simila (1570) 3120 592.0 5.1e-166
gi|119889342|ref|XP_588515.3| PREDICTED: similar t (1587) 3012 571.9 5.8e-160
gi|74206615|dbj|BAE41565.1| unnamed protein produc ( 489) 2222 424.3 4.6e-116
gi|73961535|ref|XP_547523.2| PREDICTED: similar to (1545) 1925 369.4 5.1e-99
gi|32484163|gb|AAH54078.1| Arhgef11 protein [Mus m ( 378) 1509 291.4 3.6e-76
gi|58177303|pdb|1XCG|A Chain A, Crystal Structure ( 368) 1294 251.4 4e-64
gi|118102072|ref|XP_423659.2| PREDICTED: similar t (1337) 1218 237.6 2e-59
gi|149048201|gb|EDM00777.1| Rho guanine nucleotide ( 211) 1147 223.8 4.6e-56
gi|118101911|ref|XP_417890.2| PREDICTED: similar t (1614) 832 165.8 1e-37
gi|149634999|ref|XP_001505606.1| PREDICTED: simila (1628) 826 164.7 2.2e-37
gi|224083300|ref|XP_002191067.1| PREDICTED: simila (1437) 824 164.3 2.6e-37
gi|73955010|ref|XP_536546.2| PREDICTED: similar to (1708) 823 164.1 3.4e-37
gi|149041417|gb|EDL95258.1| Rho guanine nucleotide (1002) 813 162.1 8.2e-37
gi|60549645|gb|AAX24128.1| leukemia-associated Rho (1546) 815 162.6 8.9e-37
gi|77362757|dbj|BAD89994.2| guanine nucleotide exc (1544) 812 162.1 1.3e-36
gi|47225083|emb|CAF97498.1| unnamed protein produc (1281) 809 161.4 1.7e-36
gi|112418516|gb|AAI21928.1| Rho guanine nucleotide (1417) 800 159.8 5.8e-36
gi|194378346|dbj|BAG57923.1| unnamed protein produ (1078) 798 159.3 6e-36
gi|55670065|pdb|1TXD|A Chain A, Crystal Structure ( 385) 791 157.7 6.7e-36
gi|194212784|ref|XP_001917643.1| PREDICTED: simila (1734) 800 159.9 6.8e-36
gi|194385582|dbj|BAG65168.1| unnamed protein produ (1278) 798 159.4 6.9e-36
gi|114640825|ref|XP_508820.2| PREDICTED: Rho guani (1441) 798 159.4 7.6e-36
gi|114640823|ref|XP_001166795.1| PREDICTED: Rho gu (1525) 798 159.4 7.9e-36
gi|114640821|ref|XP_001166830.1| PREDICTED: Rho gu (1544) 798 159.4 8e-36
gi|34395525|sp|Q9NZN5.1|ARHGC_HUMAN RecName: Full= (1544) 798 159.4 8e-36
gi|126326889|ref|XP_001380299.1| PREDICTED: simila (1545) 798 159.4 8e-36
gi|189519551|ref|XP_001920310.1| PREDICTED: simila (1079) 793 158.4 1.2e-35
gi|34395522|sp|Q8R4H2.1|ARHGC_MOUSE RecName: Full= (1543) 791 158.1 2e-35
gi|162319632|gb|AAI56559.1| Rho guanine nucleotide (1544) 791 158.1 2e-35
gi|148693598|gb|EDL25545.1| Rho guanine nucleotide (1552) 791 158.1 2e-35
gi|148693599|gb|EDL25546.1| Rho guanine nucleotide (1553) 791 158.1 2e-35
gi|148693600|gb|EDL25547.1| Rho guanine nucleotide (1554) 791 158.1 2e-35
gi|34304609|gb|AAQ63410.1| PDZ-RhoGEF [Danio rerio (1417) 788 157.6 2.7e-35
gi|213626350|gb|AAI70436.1| Unknown (protein for M (1431) 785 157.0 4e-35
>>gi|51260874|gb|AAH79565.1| Rho guanine nucleotide exch (1552 aa)
initn: 4346 init1: 4346 opt: 4346 Z-score: 4371.2 bits: 820.3 E(): 0
Smith-Waterman score: 4346; 99.847% identity (100.000% similar) in 653 aa overlap (1-653:900-1552)
10 20 30
mKIAA0 QLRDLIISEMQRLTKYPLLLENIIKHTAGG
::::::::::::::::::::::::::::::
gi|512 LELIRTKQRKESRFQLFMQEAESHPQCRRLQLRDLIISEMQRLTKYPLLLENIIKHTAGG
870 880 890 900 910 920
40 50 60 70 80 90
mKIAA0 TSEHEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|512 TSEYEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
930 940 950 960 970 980
100 110 120 130 140 150
mKIAA0 DLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEEKLLLKCHSKTAVGSSDSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|512 DLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEEKLLLKCHSKTAVGSSDSK
990 1000 1010 1020 1030 1040
160 170 180 190 200 210
mKIAA0 QTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNIWMELLEEAVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|512 QTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNIWMELLEEAVQ
1050 1060 1070 1080 1090 1100
220 230 240 250 260 270
mKIAA0 NATKHPGDAPVLNHPSPPGSQEPAYQGSTSSRVEVNDSEVYPTEREPKKPSEGPGPEQRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|512 NATKHPGDAPVLNHPSPPGSQEPAYQGSTSSRVEVNDSEVYPTEREPKKPSEGPGPEQRG
1110 1120 1130 1140 1150 1160
280 290 300 310 320 330
mKIAA0 QDKQLLAQEGPEQEEDAEELRALPCPPPSLDGENRGIRTRDPVLLALTGPLLMEGLADAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|512 QDKQLLAQEGPEQEEDAEELRALPCPPPSLDGENRGIRTRDPVLLALTGPLLMEGLADAA
1170 1180 1190 1200 1210 1220
340 350 360 370 380 390
mKIAA0 LEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSPGQAPAISD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|512 LEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSPGQAPAISD
1230 1240 1250 1260 1270 1280
400 410 420 430 440 450
mKIAA0 NTQFPRPEGSQPEGEDVALCSLAHLPPRTRNSGIWDSPELDRNPAEEASSSEPAGSYKVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|512 NTQFPRPEGSQPEGEDVALCSLAHLPPRTRNSGIWDSPELDRNPAEEASSSEPAGSYKVV
1290 1300 1310 1320 1330 1340
460 470 480 490 500 510
mKIAA0 RKVSLLPGGGVGAAKVAGSNVTPALPESGQSESELSEVEGGAQATGNCFYVSMPAEPLDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|512 RKVSLLPGGGVGAAKVAGSNVTPALPESGQSESELSEVEGGAQATGNCFYVSMPAEPLDS
1350 1360 1370 1380 1390 1400
520 530 540 550 560 570
mKIAA0 STEPPGTPPSLSQCHSLPAWPTEPPQHRGVTGGQRSSLVLRDMGVIFHTIEQLTVKLHRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|512 STEPPGTPPSLSQCHSLPAWPTEPPQHRGVTGGQRSSLVLRDMGVIFHTIEQLTVKLHRL
1410 1420 1430 1440 1450 1460
580 590 600 610 620 630
mKIAA0 KDMELAHRELLNSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEALTSDPQNNQEQGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|512 KDMELAHRELLNSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEALTSDPQNNQEQGS
1470 1480 1490 1500 1510 1520
640 650
mKIAA0 YPEEGSDTPLEDSATDTASSPGP
:::::::::::::::::::::::
gi|512 YPEEGSDTPLEDSATDTASSPGP
1530 1540 1550
>>gi|148683406|gb|EDL15353.1| Rho guanine nucleotide exc (1388 aa)
initn: 3091 init1: 3091 opt: 4328 Z-score: 4353.7 bits: 817.0 E(): 0
Smith-Waterman score: 4328; 98.790% identity (98.790% similar) in 661 aa overlap (1-653:728-1388)
10 20 30
mKIAA0 QLRDLIISEMQRLTKYPLLLENIIKHTAGG
::::::::::::::::::::::::::::::
gi|148 LELIRTKQRKESRFQLFMQEAESHPQCRRLQLRDLIISEMQRLTKYPLLLENIIKHTAGG
700 710 720 730 740 750
40 50 60 70 80 90
mKIAA0 TSEHEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 TSEHEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
760 770 780 790 800 810
100 110 120 130 140 150
mKIAA0 DLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEEKLLLKCHSKTAVGSSDSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 DLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEEKLLLKCHSKTAVGSSDSK
820 830 840 850 860 870
160 170 180 190 200
mKIAA0 QTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNI--------WM
:::::::::::::::::::::::::::::::::::::::::::::::::: ::
gi|148 QTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNIPVFVPSNRWM
880 890 900 910 920 930
210 220 230 240 250 260
mKIAA0 ELLEEAVQNATKHPGDAPVLNHPSPPGSQEPAYQGSTSSRVEVNDSEVYPTEREPKKPSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 ELLEEAVQNATKHPGDAPVLNHPSPPGSQEPAYQGSTSSRVEVNDSEVYPTEREPKKPSE
940 950 960 970 980 990
270 280 290 300 310 320
mKIAA0 GPGPEQRGQDKQLLAQEGPEQEEDAEELRALPCPPPSLDGENRGIRTRDPVLLALTGPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 GPGPEQRGQDKQLLAQEGPEQEEDAEELRALPCPPPSLDGENRGIRTRDPVLLALTGPLL
1000 1010 1020 1030 1040 1050
330 340 350 360 370 380
mKIAA0 MEGLADAALEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 MEGLADAALEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSP
1060 1070 1080 1090 1100 1110
390 400 410 420 430 440
mKIAA0 GQAPAISDNTQFPRPEGSQPEGEDVALCSLAHLPPRTRNSGIWDSPELDRNPAEEASSSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 GQAPAISDNTQFPRPEGSQPEGEDVALCSLAHLPPRTRNSGIWDSPELDRNPAEEASSSE
1120 1130 1140 1150 1160 1170
450 460 470 480 490 500
mKIAA0 PAGSYKVVRKVSLLPGGGVGAAKVAGSNVTPALPESGQSESELSEVEGGAQATGNCFYVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 PAGSYKVVRKVSLLPGGGVGAAKVAGSNVTPALPESGQSESELSEVEGGAQATGNCFYVS
1180 1190 1200 1210 1220 1230
510 520 530 540 550 560
mKIAA0 MPAEPLDSSTEPPGTPPSLSQCHSLPAWPTEPPQHRGVTGGQRSSLVLRDMGVIFHTIEQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 MPAEPLDSSTEPPGTPPSLSQCHSLPAWPTEPPQHRGVTGGQRSSLVLRDMGVIFHTIEQ
1240 1250 1260 1270 1280 1290
570 580 590 600 610 620
mKIAA0 LTVKLHRLKDMELAHRELLNSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEALTSDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 LTVKLHRLKDMELAHRELLNSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEALTSDP
1300 1310 1320 1330 1340 1350
630 640 650
mKIAA0 QNNQEQGSYPEEGSDTPLEDSATDTASSPGP
:::::::::::::::::::::::::::::::
gi|148 QNNQEQGSYPEEGSDTPLEDSATDTASSPGP
1360 1370 1380
>>gi|74178679|dbj|BAE34007.1| unnamed protein product [M (1476 aa)
initn: 4023 init1: 4023 opt: 4023 Z-score: 4046.3 bits: 760.2 E(): 1.1e-216
Smith-Waterman score: 4023; 99.670% identity (100.000% similar) in 606 aa overlap (1-606:871-1476)
10 20 30
mKIAA0 QLRDLIISEMQRLTKYPLLLENIIKHTAGG
::::::::::::::::::::::::::::::
gi|741 LELIRTKQRKESRFQLFMQEAESHPQCRRLQLRDLIISEMQRLTKYPLLLENIIKHTAGG
850 860 870 880 890 900
40 50 60 70 80 90
mKIAA0 TSEHEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|741 TSEHEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
910 920 930 940 950 960
100 110 120 130 140 150
mKIAA0 DLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEEKLLLKCHSKTAVGSSDSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|741 DLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEEKLLLKCHSKTAVGSSDSK
970 980 990 1000 1010 1020
160 170 180 190 200 210
mKIAA0 QTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNIWMELLEEAVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|741 QTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNIWMELLEEAVQ
1030 1040 1050 1060 1070 1080
220 230 240 250 260 270
mKIAA0 NATKHPGDAPVLNHPSPPGSQEPAYQGSTSSRVEVNDSEVYPTEREPKKPSEGPGPEQRG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|741 NATKHPGDAPVLNHPSPPGSQEPAYQGSTSSRVEVNDSEVYPTEREPKKPSEGPGPEQRG
1090 1100 1110 1120 1130 1140
280 290 300 310 320 330
mKIAA0 QDKQLLAQEGPEQEEDAEELRALPCPPPSLDGENRGIRTRDPVLLALTGPLLMEGLADAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|741 QDKQLLAQEGPEQEEDAEELRALPCPPPSLDGENRGIRTRDPVLLALTGPLLMEGLADAA
1150 1160 1170 1180 1190 1200
340 350 360 370 380 390
mKIAA0 LEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSPGQAPAISD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|741 LEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSPGQAPAISD
1210 1220 1230 1240 1250 1260
400 410 420 430 440 450
mKIAA0 NTQFPRPEGSQPEGEDVALCSLAHLPPRTRNSGIWDSPELDRNPAEEASSSEPAGSYKVV
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
gi|741 NTQFPRPEGSQPEGEDVALCSLAHLPPRTRNSGIWDSPELDRNPVEEASSSEPAGSYKVV
1270 1280 1290 1300 1310 1320
460 470 480 490 500 510
mKIAA0 RKVSLLPGGGVGAAKVAGSNVTPALPESGQSESELSEVEGGAQATGNCFYVSMPAEPLDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|741 RKVSLLPGGGVGAAKVAGSNVTPALPESGQSESELSEVEGGAQATGNCFYVSMPAEPLDS
1330 1340 1350 1360 1370 1380
520 530 540 550 560 570
mKIAA0 STEPPGTPPSLSQCHSLPAWPTEPPQHRGVTGGQRSSLVLRDMGVIFHTIEQLTVKLHRL
::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
gi|741 STEPPGTPPSLSQCRSLPAWPTEPPQHRGVTGGQRSSLVLRDMGVIFHTIEQLTVKLHRL
1390 1400 1410 1420 1430 1440
580 590 600 610 620 630
mKIAA0 KDMELAHRELLNSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEALTSDPQNNQEQGS
::::::::::::::::::::::::::::::::::::
gi|741 KDMELAHRELLNSLGGESSGGTTPVGSFHTEAARWT
1450 1460 1470
640 650
mKIAA0 YPEEGSDTPLEDSATDTASSPGP
>>gi|149048200|gb|EDM00776.1| Rho guanine nucleotide exc (1432 aa)
initn: 2890 init1: 2890 opt: 3907 Z-score: 3929.7 bits: 738.5 E(): 3.5e-210
Smith-Waterman score: 3907; 90.965% identity (94.793% similar) in 653 aa overlap (1-653:783-1432)
10 20 30
mKIAA0 QLRDLIISEMQRLTKYPLLLENIIKHTAGG
::::::.:::::::::::::::::::: ::
gi|149 LELIRTKQRKESRFQLFMQEAESHPQCRRLQLRDLIVSEMQRLTKYPLLLENIIKHTEGG
760 770 780 790 800 810
40 50 60 70 80 90
mKIAA0 TSEHEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 TSEHEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
820 830 840 850 860 870
100 110 120 130 140 150
mKIAA0 DLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEEKLLLKCHSKTAVGSSDSK
::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
gi|149 DLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEERLLLKCHSKTAVGSSDSK
880 890 900 910 920 930
160 170 180 190 200 210
mKIAA0 QTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNIWMELLEEAVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 QTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNIWMELLEEAVQ
940 950 960 970 980 990
220 230 240 250 260 270
mKIAA0 NATKHPGDAPVLNHPSPPGSQEPAYQGSTSSRVEVNDSEVYPTEREPKKPSEGPGPEQRG
::::::: ::. :::::::::::::::::::::.:::::: ::.:::: ::::::::
gi|149 NATKHPGAAPIPIHPSPPGSQEPAYQGSTSSRVEINDSEVYHTEKEPKKLPEGPGPEQRV
1000 1010 1020 1030 1040 1050
280 290 300 310 320 330
mKIAA0 QDKQLLAQEGPEQEEDAEELRALPCPPPSLDGENRGIRTRDPVLLALTGPLLMEGLADAA
:::::.:: : :::: ::::.:: ::::::::::::::::::::::::::::::::::
gi|149 QDKQLIAQGEPVQEEDEEELRTLPRAPPSLDGENRGIRTRDPVLLALTGPLLMEGLADAA
1060 1070 1080 1090 1100 1110
340 350 360 370 380 390
mKIAA0 LEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSPGQAPAISD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
gi|149 LEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSPGQAPTISD
1120 1130 1140 1150 1160 1170
400 410 420 430 440 450
mKIAA0 NTQFPRPEGSQPEGEDVALCSLAHLPPRTRNSGIWDSPELDRNPAEEASSSEPAGSYKVV
.:.. :::::::::::::. ::::::::::.::.::::::::::: ::.:.:::.:::::
gi|149 STRLARPEGSQPEGEDVAVSSLAHLPPRTRSSGVWDSPELDRNPAAEAASTEPAASYKVV
1180 1190 1200 1210 1220 1230
460 470 480 490 500 510
mKIAA0 RKVSLLPGGGVGAAKVAGSNVTPALPESGQSESELSEVEGGAQATGNCFYVSMPAEPLDS
:::::::::::::::::::: :.:.:::::::::::::::::::::::::::: ::::
gi|149 RKVSLLPGGGVGAAKVAGSN---AIPDSGQSESELSEVEGGAQATGNCFYVSMPAGPLDS
1240 1250 1260 1270 1280
520 530 540 550 560 570
mKIAA0 STEPPGTPPSLSQCHSLPAWPTEPPQHRGVTGGQRSSLVLRDMGVIFHTIEQLTVKLHRL
:::: ::::: ::::::::::::: .::: ::: :::: ::. ::::::::::.:::::
gi|149 STEPTGTPPSPSQCHSLPAWPTEPQPYRGVRGGQCSSLVRRDVDVIFHTIEQLTIKLHRL
1290 1300 1310 1320 1330 1340
580 590 600 610 620 630
mKIAA0 KDMELAHRELLNSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEALTSDPQNNQEQGS
:::::::::::.::::::::::::::::::::::::::::::::::::.:: ::.:::::
gi|149 KDMELAHRELLKSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEALASDSQNGQEQGS
1350 1360 1370 1380 1390 1400
640 650
mKIAA0 YPEEGSDTPLEDSATDTASSPGP
:::::: ::::::::: ::::
gi|149 CPEEGSDIALEDSATDTAVSPGP
1410 1420 1430
>>gi|34395514|sp|Q9ES67.1|ARHGB_RAT RecName: Full=Rho gu (1527 aa)
initn: 2890 init1: 2890 opt: 3907 Z-score: 3929.3 bits: 738.6 E(): 3.7e-210
Smith-Waterman score: 3907; 90.965% identity (94.793% similar) in 653 aa overlap (1-653:878-1527)
10 20 30
mKIAA0 QLRDLIISEMQRLTKYPLLLENIIKHTAGG
::::::.:::::::::::::::::::: ::
gi|343 LELIRTKQRKESRFQLFMQEAESHPQCRRLQLRDLIVSEMQRLTKYPLLLENIIKHTEGG
850 860 870 880 890 900
40 50 60 70 80 90
mKIAA0 TSEHEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|343 TSEHEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
910 920 930 940 950 960
100 110 120 130 140 150
mKIAA0 DLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEEKLLLKCHSKTAVGSSDSK
::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
gi|343 DLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEERLLLKCHSKTAVGSSDSK
970 980 990 1000 1010 1020
160 170 180 190 200 210
mKIAA0 QTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNIWMELLEEAVQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|343 QTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNIWMELLEEAVQ
1030 1040 1050 1060 1070 1080
220 230 240 250 260 270
mKIAA0 NATKHPGDAPVLNHPSPPGSQEPAYQGSTSSRVEVNDSEVYPTEREPKKPSEGPGPEQRG
::::::: ::. :::::::::::::::::::::.:::::: ::.:::: ::::::::
gi|343 NATKHPGAAPIPIHPSPPGSQEPAYQGSTSSRVEINDSEVYHTEKEPKKLPEGPGPEQRV
1090 1100 1110 1120 1130 1140
280 290 300 310 320 330
mKIAA0 QDKQLLAQEGPEQEEDAEELRALPCPPPSLDGENRGIRTRDPVLLALTGPLLMEGLADAA
:::::.:: : :::: ::::.:: ::::::::::::::::::::::::::::::::::
gi|343 QDKQLIAQGEPVQEEDEEELRTLPRAPPSLDGENRGIRTRDPVLLALTGPLLMEGLADAA
1150 1160 1170 1180 1190 1200
340 350 360 370 380 390
mKIAA0 LEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSPGQAPAISD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
gi|343 LEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSPGQAPTISD
1210 1220 1230 1240 1250 1260
400 410 420 430 440 450
mKIAA0 NTQFPRPEGSQPEGEDVALCSLAHLPPRTRNSGIWDSPELDRNPAEEASSSEPAGSYKVV
.:.. :::::::::::::. ::::::::::.::.::::::::::: ::.:.:::.:::::
gi|343 STRLARPEGSQPEGEDVAVSSLAHLPPRTRSSGVWDSPELDRNPAAEAASTEPAASYKVV
1270 1280 1290 1300 1310 1320
460 470 480 490 500 510
mKIAA0 RKVSLLPGGGVGAAKVAGSNVTPALPESGQSESELSEVEGGAQATGNCFYVSMPAEPLDS
:::::::::::::::::::: :.:.:::::::::::::::::::::::::::: ::::
gi|343 RKVSLLPGGGVGAAKVAGSN---AIPDSGQSESELSEVEGGAQATGNCFYVSMPAGPLDS
1330 1340 1350 1360 1370 1380
520 530 540 550 560 570
mKIAA0 STEPPGTPPSLSQCHSLPAWPTEPPQHRGVTGGQRSSLVLRDMGVIFHTIEQLTVKLHRL
:::: ::::: ::::::::::::: .::: ::: :::: ::. ::::::::::.:::::
gi|343 STEPTGTPPSPSQCHSLPAWPTEPQPYRGVRGGQCSSLVRRDVDVIFHTIEQLTIKLHRL
1390 1400 1410 1420 1430 1440
580 590 600 610 620 630
mKIAA0 KDMELAHRELLNSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEALTSDPQNNQEQGS
:::::::::::.::::::::::::::::::::::::::::::::::::.:: ::.:::::
gi|343 KDMELAHRELLKSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEALASDSQNGQEQGS
1450 1460 1470 1480 1490 1500
640 650
mKIAA0 YPEEGSDTPLEDSATDTASSPGP
:::::: ::::::::: ::::
gi|343 CPEEGSDIALEDSATDTAVSPGP
1510 1520
>>gi|149048199|gb|EDM00775.1| Rho guanine nucleotide exc (1385 aa)
initn: 2330 init1: 1637 opt: 3881 Z-score: 3903.7 bits: 733.7 E(): 9.8e-209
Smith-Waterman score: 3881; 89.864% identity (93.646% similar) in 661 aa overlap (1-653:728-1385)
10 20 30
mKIAA0 QLRDLIISEMQRLTKYPLLLENIIKHTAGG
::::::.:::::::::::::::::::: ::
gi|149 LELIRTKQRKESRFQLFMQEAESHPQCRRLQLRDLIVSEMQRLTKYPLLLENIIKHTEGG
700 710 720 730 740 750
40 50 60 70 80 90
mKIAA0 TSEHEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 TSEHEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
760 770 780 790 800 810
100 110 120 130 140 150
mKIAA0 DLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEEKLLLKCHSKTAVGSSDSK
::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
gi|149 DLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEERLLLKCHSKTAVGSSDSK
820 830 840 850 860 870
160 170 180 190 200
mKIAA0 QTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNI--------WM
:::::::::::::::::::::::::::::::::::::::::::::::::: ::
gi|149 QTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNIPVFLPSNRWM
880 890 900 910 920 930
210 220 230 240 250 260
mKIAA0 ELLEEAVQNATKHPGDAPVLNHPSPPGSQEPAYQGSTSSRVEVNDSEVYPTEREPKKPSE
::::::::::::::: ::. :::::::::::::::::::::.:::::: ::.:::: :
gi|149 ELLEEAVQNATKHPGAAPIPIHPSPPGSQEPAYQGSTSSRVEINDSEVYHTEKEPKKLPE
940 950 960 970 980 990
270 280 290 300 310 320
mKIAA0 GPGPEQRGQDKQLLAQEGPEQEEDAEELRALPCPPPSLDGENRGIRTRDPVLLALTGPLL
::::::: :::::.:: : :::: ::::.:: ::::::::::::::::::::::::::
gi|149 GPGPEQRVQDKQLIAQGEPVQEEDEEELRTLPRAPPSLDGENRGIRTRDPVLLALTGPLL
1000 1010 1020 1030 1040 1050
330 340 350 360 370 380
mKIAA0 MEGLADAALEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 MEGLADAALEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSP
1060 1070 1080 1090 1100 1110
390 400 410 420 430 440
mKIAA0 GQAPAISDNTQFPRPEGSQPEGEDVALCSLAHLPPRTRNSGIWDSPELDRNPAEEASSSE
::::.:::.:.. :::::::::::::. ::::::::::.::.::::::::::: ::.:.:
gi|149 GQAPTISDSTRLARPEGSQPEGEDVAVSSLAHLPPRTRSSGVWDSPELDRNPAAEAASTE
1120 1130 1140 1150 1160 1170
450 460 470 480 490 500
mKIAA0 PAGSYKVVRKVSLLPGGGVGAAKVAGSNVTPALPESGQSESELSEVEGGAQATGNCFYVS
::.::::::::::::::::::::::::: :.:.:::::::::::::::::::::::::
gi|149 PAASYKVVRKVSLLPGGGVGAAKVAGSN---AIPDSGQSESELSEVEGGAQATGNCFYVS
1180 1190 1200 1210 1220 1230
510 520 530 540 550 560
mKIAA0 MPAEPLDSSTEPPGTPPSLSQCHSLPAWPTEPPQHRGVTGGQRSSLVLRDMGVIFHTIEQ
::: :::::::: ::::: ::::::::::::: .::: ::: :::: ::. ::::::::
gi|149 MPAGPLDSSTEPTGTPPSPSQCHSLPAWPTEPQPYRGVRGGQCSSLVRRDVDVIFHTIEQ
1240 1250 1260 1270 1280 1290
570 580 590 600 610 620
mKIAA0 LTVKLHRLKDMELAHRELLNSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEALTSDP
::.::::::::::::::::.::::::::::::::::::::::::::::::::::::.::
gi|149 LTIKLHRLKDMELAHRELLKSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEALASDS
1300 1310 1320 1330 1340 1350
630 640 650
mKIAA0 QNNQEQGSYPEEGSDTPLEDSATDTASSPGP
::.::::: :::::: ::::::::: ::::
gi|149 QNGQEQGSCPEEGSDIALEDSATDTAVSPGP
1360 1370 1380
>>gi|109017416|ref|XP_001116835.1| PREDICTED: Rho guanin (1522 aa)
initn: 1883 init1: 1883 opt: 3272 Z-score: 3290.1 bits: 620.3 E(): 1.5e-174
Smith-Waterman score: 3272; 76.958% identity (87.349% similar) in 664 aa overlap (1-653:870-1522)
10 20 30
mKIAA0 QLRDLIISEMQRLTKYPLLLENIIKHTAGG
:::::::::::::::::::::.::::: ::
gi|109 LELIKTKQRKESRFQLFMQEAESHPQCRRLQLRDLIISEMQRLTKYPLLLESIIKHTEGG
840 850 860 870 880 890
40 50 60 70 80 90
mKIAA0 TSEHEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
gi|109 TSEHEKLCRARDQCREILKYVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
900 910 920 930 940 950
100 110 120 130 140 150
mKIAA0 DLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEEKLLLKCHSKTAVGSSDSK
:::::::::::::::::::::::::.:::::::.::::.:.:::::::::::::::::::
gi|109 DLTTRKMIHEGPLTWRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSK
960 970 980 990 1000 1010
160 170 180 190 200 210
mKIAA0 QTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNIWMELLEEAVQ
::::::::::::::::::::::::::::::.:::::::::::::::::: :::::::::.
gi|109 QTFSPVLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVR
1020 1030 1040 1050 1060 1070
220 230 240 250 260 270
mKIAA0 NATKHPGDAPVLNHPSPPGSQEPAYQGSTSSRVEVNDSEVYPTEREPKKPSEGPGPEQRG
:::.::: ::. :: ::: ::::.:: : ::::..::.:. : ::.. : ::.::
gi|109 NATRHPGAAPMPIHPPPPGPQEPAHQGLTPSRVELDDSDVFHGEPEPEELPGGTGPQQRV
1080 1090 1100 1110 1120 1130
280 290 300 310 320
mKIAA0 QDKQLLAQEGPEQEEDAEE--LRALPCPPPSLDGENRGIRTRDPVLLALTGPLLMEGLAD
: :. . : :::: .::: : .:::: ::::::::::::.:. ::. :::.::::::
gi|109 QGKHPVLLEDPEQEGSAEEEELGVLPCPSTSLDGENRGIRTRNPIHLAFPGPLFMEGLAD
1140 1150 1160 1170 1180 1190
330 340 350 360 370 380
mKIAA0 AALEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSPGQAP--
.:::::::::::::::::::::..:::: ::::::::::::.:.::::::::::::::
gi|109 SALEDVENLRHLILWSLLPGHTMETQAAREPEDDLTPTPSVISVTSHPWDPGSPGQAPPG
1200 1210 1220 1230 1240 1250
390 400 410 420 430 440
mKIAA0 AISDNTQFPRPEGSQPEGEDVALCSLAHLPPRTRNSGIWDSPELDRNPAEEASSSEPAGS
. .::::. :::..:: :::.:::: ::::::::::::.::::::: ::.:::.: ::.
gi|109 GQGDNTQLAGPEGGRPEQEDVGLCSLEHLPPRTRNSGIWESPELDRNLAEDASSTEAAGG
1260 1270 1280 1290 1300 1310
450 460 470 480 490 500
mKIAA0 YKVVRKVSLLPGGGVGAAKVAGSNVTPALPESGQSESELSEVEGGAQATGNCFYVSMPAE
:::::: :.::::.:.:::::::: : :::::..::::::::::::
gi|109 YKVVRK-----------AEVAGSKVVPALPESGQPEPGPPEVEGGTKATGNCFYVSMPAG
1320 1330 1340 1350 1360
510 520 530 540 550
mKIAA0 PLDSSTEPPGTPPSLSQCHSLPAWPTEP-PQHRGVTGGQRS------SLVLRDMGVIFHT
::::::. :.: : : :.:: .:: :: .: .: : ::.:::.:.::.:
gi|109 PLDSSTDHSGVPTSPPQPDSVPAGQAEPRPQLQGGNGDPRRLSRSPPSLALRDVGMIFRT
1370 1380 1390 1400 1410 1420
560 570 580 590 600 610
mKIAA0 IEQLTVKLHRLKDMELAHRELLNSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEALT
:::::.::.:::::::::::::.::::::::::::::::::::::::: :::::.:: :.
gi|109 IEQLTLKLNRLKDMELAHRELLKSLGGESSGGTTPVGSFHTEAARWTDGSLSPPTKEPLA
1430 1440 1450 1460 1470 1480
620 630 640 650
mKIAA0 SDPQNNQEQGSYPEEGSDTPLEDSATDTASSPGP
:: .:..: : ::.:::.::::::.:.:.::::
gi|109 SDSRNSHELGPCPEDGSDAPLEDSAADAAASPGP
1490 1500 1510 1520
>>gi|109017414|ref|XP_001116843.1| PREDICTED: Rho guanin (1562 aa)
initn: 1883 init1: 1883 opt: 3272 Z-score: 3289.9 bits: 620.3 E(): 1.5e-174
Smith-Waterman score: 3272; 76.958% identity (87.349% similar) in 664 aa overlap (1-653:910-1562)
10 20 30
mKIAA0 QLRDLIISEMQRLTKYPLLLENIIKHTAGG
:::::::::::::::::::::.::::: ::
gi|109 LELIKTKQRKESRFQLFMQEAESHPQCRRLQLRDLIISEMQRLTKYPLLLESIIKHTEGG
880 890 900 910 920 930
40 50 60 70 80 90
mKIAA0 TSEHEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
gi|109 TSEHEKLCRARDQCREILKYVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
940 950 960 970 980 990
100 110 120 130 140 150
mKIAA0 DLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEEKLLLKCHSKTAVGSSDSK
:::::::::::::::::::::::::.:::::::.::::.:.:::::::::::::::::::
gi|109 DLTTRKMIHEGPLTWRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSK
1000 1010 1020 1030 1040 1050
160 170 180 190 200 210
mKIAA0 QTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNIWMELLEEAVQ
::::::::::::::::::::::::::::::.:::::::::::::::::: :::::::::.
gi|109 QTFSPVLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVR
1060 1070 1080 1090 1100 1110
220 230 240 250 260 270
mKIAA0 NATKHPGDAPVLNHPSPPGSQEPAYQGSTSSRVEVNDSEVYPTEREPKKPSEGPGPEQRG
:::.::: ::. :: ::: ::::.:: : ::::..::.:. : ::.. : ::.::
gi|109 NATRHPGAAPMPIHPPPPGPQEPAHQGLTPSRVELDDSDVFHGEPEPEELPGGTGPQQRV
1120 1130 1140 1150 1160 1170
280 290 300 310 320
mKIAA0 QDKQLLAQEGPEQEEDAEE--LRALPCPPPSLDGENRGIRTRDPVLLALTGPLLMEGLAD
: :. . : :::: .::: : .:::: ::::::::::::.:. ::. :::.::::::
gi|109 QGKHPVLLEDPEQEGSAEEEELGVLPCPSTSLDGENRGIRTRNPIHLAFPGPLFMEGLAD
1180 1190 1200 1210 1220 1230
330 340 350 360 370 380
mKIAA0 AALEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSPGQAP--
.:::::::::::::::::::::..:::: ::::::::::::.:.::::::::::::::
gi|109 SALEDVENLRHLILWSLLPGHTMETQAAREPEDDLTPTPSVISVTSHPWDPGSPGQAPPG
1240 1250 1260 1270 1280 1290
390 400 410 420 430 440
mKIAA0 AISDNTQFPRPEGSQPEGEDVALCSLAHLPPRTRNSGIWDSPELDRNPAEEASSSEPAGS
. .::::. :::..:: :::.:::: ::::::::::::.::::::: ::.:::.: ::.
gi|109 GQGDNTQLAGPEGGRPEQEDVGLCSLEHLPPRTRNSGIWESPELDRNLAEDASSTEAAGG
1300 1310 1320 1330 1340 1350
450 460 470 480 490 500
mKIAA0 YKVVRKVSLLPGGGVGAAKVAGSNVTPALPESGQSESELSEVEGGAQATGNCFYVSMPAE
:::::: :.::::.:.:::::::: : :::::..::::::::::::
gi|109 YKVVRK-----------AEVAGSKVVPALPESGQPEPGPPEVEGGTKATGNCFYVSMPAG
1360 1370 1380 1390 1400
510 520 530 540 550
mKIAA0 PLDSSTEPPGTPPSLSQCHSLPAWPTEP-PQHRGVTGGQRS------SLVLRDMGVIFHT
::::::. :.: : : :.:: .:: :: .: .: : ::.:::.:.::.:
gi|109 PLDSSTDHSGVPTSPPQPDSVPAGQAEPRPQLQGGNGDPRRLSRSPPSLALRDVGMIFRT
1410 1420 1430 1440 1450 1460
560 570 580 590 600 610
mKIAA0 IEQLTVKLHRLKDMELAHRELLNSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEALT
:::::.::.:::::::::::::.::::::::::::::::::::::::: :::::.:: :.
gi|109 IEQLTLKLNRLKDMELAHRELLKSLGGESSGGTTPVGSFHTEAARWTDGSLSPPTKEPLA
1470 1480 1490 1500 1510 1520
620 630 640 650
mKIAA0 SDPQNNQEQGSYPEEGSDTPLEDSATDTASSPGP
:: .:..: : ::.:::.::::::.:.:.::::
gi|109 SDSRNSHELGPCPEDGSDAPLEDSAADAAASPGP
1530 1540 1550 1560
>>gi|221044102|dbj|BAH13728.1| unnamed protein product [ (938 aa)
initn: 1852 init1: 1852 opt: 3228 Z-score: 3248.7 bits: 611.9 E(): 3e-172
Smith-Waterman score: 3228; 76.355% identity (86.596% similar) in 664 aa overlap (1-653:286-938)
10 20 30
mKIAA0 QLRDLIISEMQRLTKYPLLLENIIKHTAGG
:::::::::::::::::::::.::::: ::
gi|221 LELIKTKQRKESRFQLFMQEAESHPQCRRLQLRDLIISEMQRLTKYPLLLESIIKHTEGG
260 270 280 290 300 310
40 50 60 70 80 90
mKIAA0 TSEHEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
gi|221 TSEHEKLCRARDQCREILKYVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
320 330 340 350 360 370
100 110 120 130 140 150
mKIAA0 DLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEEKLLLKCHSKTAVGSSDSK
:::::::::::::::::::::::::.:::::::.::::.:.:::::::::::::::::::
gi|221 DLTTRKMIHEGPLTWRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSK
380 390 400 410 420 430
160 170 180 190 200 210
mKIAA0 QTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNIWMELLEEAVQ
::::::::::::::::::::::::::::::.:::::::::::::::::: :::::::::.
gi|221 QTFSPVLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVR
440 450 460 470 480 490
220 230 240 250 260 270
mKIAA0 NATKHPGDAPVLNHPSPPGSQEPAYQGSTSSRVEVNDSEVYPTEREPKKPSEGPGPEQRG
:::.::: ::. :: ::: .::: :: : ::::..::.:. : ::.. : : .::
gi|221 NATRHPGAAPMPVHPPPPGPREPAQQGPTPSRVELDDSDVFHGEPEPEELPGGTGSQQRV
500 510 520 530 540 550
280 290 300 310 320
mKIAA0 QDKQLLAQEGPEQEEDAEE--LRALPCPPPSLDGENRGIRTRDPVLLALTGPLLMEGLAD
: :. . : :::: .::: : .::::: ::::::::::::.:. ::. :::.::::::
gi|221 QGKHQVLLEDPEQEGSAEEEELGVLPCPPTSLDGENRGIRTRNPIHLAFPGPLFMEGLAD
560 570 580 590 600 610
330 340 350 360 370 380
mKIAA0 AALEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSPGQAP--
.:::::::::::::::::::::..:::: ::::::::::::.:.::::::::::::::
gi|221 SALEDVENLRHLILWSLLPGHTMETQAAQEPEDDLTPTPSVISVTSHPWDPGSPGQAPPG
620 630 640 650 660 670
390 400 410 420 430 440
mKIAA0 AISDNTQFPRPEGSQPEGEDVALCSLAHLPPRTRNSGIWDSPELDRNPAEEASSSEPAGS
. .::::. :: .:: ::..:::: ::::::::::::.::::::: ::.:::.: ::.
gi|221 GEGDNTQLAGLEGERPEQEDMGLCSLEHLPPRTRNSGIWESPELDRNLAEDASSTEAAGG
680 690 700 710 720 730
450 460 470 480 490 500
mKIAA0 YKVVRKVSLLPGGGVGAAKVAGSNVTPALPESGQSESELSEVEGGAQATGNCFYVSMPAE
:::::: :.::::.:.:::::::::: :::::..:::::::::::.
gi|221 YKVVRK-----------AEVAGSKVVPALPESGQSEPGPPEVEGGTKATGNCFYVSMPSG
740 750 760 770 780
510 520 530 540 550
mKIAA0 PLDSSTEPPGTPPSLSQCHSLPAWPTEP-PQHRGVTGGQRS------SLVLRDMGVIFHT
: ::::. .: : : :::: ::: :: .: . : ::.:::.:.::.:
gi|221 PPDSSTDHSEAPMSPPQPDSLPAGQTEPQPQLQGGNDDPRRPSRSPPSLALRDVGMIFRT
790 800 810 820 830 840
560 570 580 590 600 610
mKIAA0 IEQLTVKLHRLKDMELAHRELLNSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEALT
:::::.::.:::::::::::::.::::::::::::::::::::::::: :::::::: :.
gi|221 IEQLTLKLNRLKDMELAHRELLKSLGGESSGGTTPVGSFHTEAARWTDGSLSPPAKEPLA
850 860 870 880 890 900
620 630 640 650
mKIAA0 SDPQNNQEQGSYPEEGSDTPLEDSATDTASSPGP
:: .:..: : ::.:::.:::::..:.:.::::
gi|221 SDSRNSHELGPCPEDGSDAPLEDSTADAAASPGP
910 920 930
>>gi|34395516|sp|O15085.1|ARHGB_HUMAN RecName: Full=Rho (1522 aa)
initn: 1868 init1: 1868 opt: 3227 Z-score: 3244.8 bits: 611.9 E(): 5e-172
Smith-Waterman score: 3227; 76.355% identity (86.446% similar) in 664 aa overlap (1-653:870-1522)
10 20 30
mKIAA0 QLRDLIISEMQRLTKYPLLLENIIKHTAGG
:::::::::::::::::::::.::::: ::
gi|343 LELIKTKQRKESRFQLFMQEAESHPQCRRLQLRDLIISEMQRLTKYPLLLESIIKHTEGG
840 850 860 870 880 890
40 50 60 70 80 90
mKIAA0 TSEHEKLCRARDQCREILKFVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
gi|343 TSEHEKLCRARDQCREILKYVNEAVKQTENRHRLEGYQKRLDATALERASNPLAAEFKSL
900 910 920 930 940 950
100 110 120 130 140 150
mKIAA0 DLTTRKMIHEGPLTWRISKDKTLDLQVLLLEDLVVLLQRQEEKLLLKCHSKTAVGSSDSK
:::::::::::::::::::::::::.:::::::.::::.:.:::::::::::::::::::
gi|343 DLTTRKMIHEGPLTWRISKDKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSK
960 970 980 990 1000 1010
160 170 180 190 200 210
mKIAA0 QTFSPVLKLNAVLIRSVATDKRAFFIICTSELGPPQIYELVALTSSDKNIWMELLEEAVQ
::::::::::::::::::::::::::::::.:::::::::::::::::: :::::::::.
gi|343 QTFSPVLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVR
1020 1030 1040 1050 1060 1070
220 230 240 250 260 270
mKIAA0 NATKHPGDAPVLNHPSPPGSQEPAYQGSTSSRVEVNDSEVYPTEREPKKPSEGPGPEQRG
:::.::: ::. :: ::: .::: :: : ::::..::.:. : ::.. : : .::
gi|343 NATRHPGAAPMPVHPPPPGPREPAQQGPTPSRVELDDSDVFHGEPEPEELPGGTGSQQRV
1080 1090 1100 1110 1120 1130
280 290 300 310 320
mKIAA0 QDKQLLAQEGPEQEEDAEE--LRALPCPPPSLDGENRGIRTRDPVLLALTGPLLMEGLAD
: :. . : :::: .::: : .:::: ::::::::::::.:. ::. :::.::::::
gi|343 QGKHQVLLEDPEQEGSAEEEELGVLPCPSTSLDGENRGIRTRNPIHLAFPGPLFMEGLAD
1140 1150 1160 1170 1180 1190
330 340 350 360 370 380
mKIAA0 AALEDVENLRHLILWSLLPGHTVKTQAAGEPEDDLTPTPSVVSITSHPWDPGSPGQAP--
.:::::::::::::::::::::..:::: ::::::::::::.:.::::::::::::::
gi|343 SALEDVENLRHLILWSLLPGHTMETQAAQEPEDDLTPTPSVISVTSHPWDPGSPGQAPPG
1200 1210 1220 1230 1240 1250
390 400 410 420 430 440
mKIAA0 AISDNTQFPRPEGSQPEGEDVALCSLAHLPPRTRNSGIWDSPELDRNPAEEASSSEPAGS
. .::::. :: .:: ::..:::: ::::::::::::.::::::: ::.:::.: ::.
gi|343 GEGDNTQLAGLEGERPEQEDMGLCSLEHLPPRTRNSGIWESPELDRNLAEDASSTEAAGG
1260 1270 1280 1290 1300 1310
450 460 470 480 490 500
mKIAA0 YKVVRKVSLLPGGGVGAAKVAGSNVTPALPESGQSESELSEVEGGAQATGNCFYVSMPAE
:::::: :.::::.:.:::::::::: :::::..:::::::::::.
gi|343 YKVVRK-----------AEVAGSKVVPALPESGQSEPGPPEVEGGTKATGNCFYVSMPSG
1320 1330 1340 1350 1360
510 520 530 540 550
mKIAA0 PLDSSTEPPGTPPSLSQCHSLPAWPTEP-PQHRGVTGGQRS------SLVLRDMGVIFHT
: ::::. .: : : :::: ::: :: .: . : ::.:::.:.::::
gi|343 PPDSSTDHSEAPMSPPQPDSLPAGQTEPQPQLQGGNDDPRRPSRSPPSLALRDVGMIFHT
1370 1380 1390 1400 1410 1420
560 570 580 590 600 610
mKIAA0 IEQLTVKLHRLKDMELAHRELLNSLGGESSGGTTPVGSFHTEAARWTDYSLSPPAKEALT
:::::.::.:::::::::::::.::::::::::::::::::::::::: :::::::: :.
gi|343 IEQLTLKLNRLKDMELAHRELLKSLGGESSGGTTPVGSFHTEAARWTDGSLSPPAKEPLA
1430 1440 1450 1460 1470 1480
620 630 640 650
mKIAA0 SDPQNNQEQGSYPEEGSDTPLEDSATDTASSPGP
:: .:..: : ::.:::.:::::..:.:.::::
gi|343 SDSRNSHELGPCPEDGSDAPLEDSTADAAASPGP
1490 1500 1510 1520
653 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Sat Mar 14 09:52:42 2009 done: Sat Mar 14 10:00:40 2009
Total Scan time: 1054.940 Total Display time: 0.340
Function used was FASTA [version 34.26.5 April 26, 2007]