# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj02167.fasta.nr -Q ../query/mFLJ00065.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00065, 252 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920257 sequences Expectation_n fit: rho(ln(x))= 5.2400+/-0.000186; mu= 9.2079+/- 0.010 mean_var=74.2075+/-14.325, 0's: 33 Z-trim: 34 B-trim: 274 in 1/64 Lambda= 0.148885 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|26351213|dbj|BAC39243.1| unnamed protein produc ( 271) 1803 395.9 3.6e-108 gi|149022971|gb|EDL79865.1| Bcl2 modifying factor, ( 271) 1687 371.0 1.1e-100 gi|38511854|gb|AAH60783.1| BMF protein [Homo sapie ( 261) 1352 299.0 5.1e-79 gi|123236209|emb|CAM19075.1| Bcl2 modifying factor ( 190) 1347 297.8 8.4e-79 gi|56748562|sp|Q91ZE9.1|BMF_MOUSE RecName: Full=Bc ( 185) 1323 292.7 2.9e-77 gi|56748556|sp|Q8K589.1|BMF_RAT RecName: Full=Bcl- ( 185) 1267 280.6 1.2e-73 gi|73999757|ref|XP_849063.1| PREDICTED: similar to ( 184) 1174 260.7 1.3e-67 gi|126278358|ref|XP_001380997.1| PREDICTED: simila ( 248) 1168 259.5 3.9e-67 gi|116292143|dbj|BAF35579.1| Bcl2 modifying factor ( 184) 1166 258.9 4.1e-67 gi|149692070|ref|XP_001503620.1| PREDICTED: simila ( 184) 1161 257.9 8.7e-67 gi|10440458|dbj|BAB15762.1| FLJ00065 protein [Homo ( 204) 1155 256.6 2.3e-66 gi|56748563|sp|Q96LC9.1|BMF_HUMAN RecName: Full=Bc ( 184) 1141 253.6 1.7e-65 gi|46854332|gb|AAH69328.1| BMF protein [Homo sapie ( 184) 1135 252.3 4.2e-65 gi|46854338|gb|AAH69505.1| Bcl2 modifying factor [ ( 184) 1133 251.8 5.6e-65 gi|149022970|gb|EDL79864.1| Bcl2 modifying factor, ( 256) 1110 247.0 2.2e-63 gi|115607140|gb|ABJ16416.1| BMF [Felis catus] ( 184) 1064 237.0 1.6e-60 gi|73999755|ref|XP_857761.1| PREDICTED: similar to ( 163) 864 194.0 1.3e-47 gi|31282889|gb|AAP22965.1| Bcl-2 modifying factor- ( 163) 829 186.5 2.3e-45 gi|224051319|ref|XP_002200524.1| PREDICTED: Bcl2 m ( 193) 766 173.0 3.1e-41 gi|156939511|gb|ABU97699.1| Bcl-2-modifying factor ( 193) 763 172.4 4.9e-41 gi|148695963|gb|EDL27910.1| Bcl2 modifying factor ( 170) 702 159.2 3.9e-37 gi|31282891|gb|AAP22966.1| Bcl-2 modifying factor- ( 129) 645 146.9 1.5e-33 gi|74152669|dbj|BAE42612.1| unnamed protein produc ( 62) 447 104.2 5.5e-21 gi|224051321|ref|XP_002200525.1| PREDICTED: Bcl2 m ( 118) 372 88.2 6.4e-16 gi|156939513|gb|ABU97700.1| Bcl-2-modifying factor ( 118) 369 87.6 1e-15 gi|126631789|gb|AAI33771.1| LOC100049108 protein [ ( 117) 342 81.8 5.5e-14 gi|169404669|pdb|2VOG|B Chain B, Structure Of Mous ( 27) 184 47.4 0.00029 >>gi|26351213|dbj|BAC39243.1| unnamed protein product [M (271 aa) initn: 1803 init1: 1803 opt: 1803 Z-score: 2098.2 bits: 395.9 E(): 3.6e-108 Smith-Waterman score: 1803; 100.000% identity (100.000% similar) in 252 aa overlap (1-252:20-271) 10 20 30 40 mFLJ00 PRQLAPAAVAAAARATASHRSPLEFAPFFPIECGHQAPRVF ::::::::::::::::::::::::::::::::::::::::: gi|263 MPGAGVFWKQYRAVCRGLLPRQLAPAAVAAAARATASHRSPLEFAPFFPIECGHQAPRVF 10 20 30 40 50 60 50 60 70 80 90 100 mFLJ00 FTLDPGAEPWHHNSEAETLSWSHPGEMEPPQCVEELEDDVFQSEDGEPGTQPGGLLSADL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FTLDPGAEPWHHNSEAETLSWSHPGEMEPPQCVEELEDDVFQSEDGEPGTQPGGLLSADL 70 80 90 100 110 120 110 120 130 140 150 160 mFLJ00 FAQSQLDCPLSRLQLFPLTHCCGPGLRPISQEDKATQTLSPASPSQGVMLPCGVTEEPQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 FAQSQLDCPLSRLQLFPLTHCCGPGLRPISQEDKATQTLSPASPSQGVMLPCGVTEEPQR 130 140 150 160 170 180 170 180 190 200 210 220 mFLJ00 LFYGNAGYRLPLPASFPAGSPLGEQPPEGQFLQHRAEVQIARKLQCIADQFHRLHTQQHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LFYGNAGYRLPLPASFPAGSPLGEQPPEGQFLQHRAEVQIARKLQCIADQFHRLHTQQHQ 190 200 210 220 230 240 230 240 250 mFLJ00 QNRDRAWWQVFLFLQNLALNRQENREGVGPW ::::::::::::::::::::::::::::::: gi|263 QNRDRAWWQVFLFLQNLALNRQENREGVGPW 250 260 270 >>gi|149022971|gb|EDL79865.1| Bcl2 modifying factor, iso (271 aa) initn: 1687 init1: 1687 opt: 1687 Z-score: 1963.6 bits: 371.0 E(): 1.1e-100 Smith-Waterman score: 1687; 93.254% identity (97.619% similar) in 252 aa overlap (1-252:20-271) 10 20 30 40 mFLJ00 PRQLAPAAVAAAARATASHRSPLEFAPFFPIECGHQAPRVF ::::.:.:::: ::::.::::::::.::::::::.:.:::: gi|149 MPGAGVFWKQYRAVRGGLLPRQLTPTAVAARARATTSHRSPLEFVPFFPIECGRQVPRVF 10 20 30 40 50 60 50 60 70 80 90 100 mFLJ00 FTLDPGAEPWHHNSEAETLSWSHPGEMEPPQCVEELEDDVFQSEDGEPGTQPGGLLSADL :::::::::::.::::::::::::.:::::::::::::::: ::::::::::.:::::: gi|149 VTLDPGAEPWHHDSEAETLSWSHPGDMEPPQCVEELEDDVFQPEDGEPGTQPGSLLSADL 70 80 90 100 110 120 110 120 130 140 150 160 mFLJ00 FAQSQLDCPLSRLQLFPLTHCCGPGLRPISQEDKATQTLSPASPSQGVMLPCGVTEEPQR ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|149 FAQSQLDCPLSRLQLFPLTHCCGPGLRPVSQEDKATQTLSPASPSQGVMLPCGVTEEPQR 130 140 150 160 170 180 170 180 190 200 210 220 mFLJ00 LFYGNAGYRLPLPASFPAGSPLGEQPPEGQFLQHRAEVQIARKLQCIADQFHRLHTQQHQ :::::::::::::::::::: :::::::::::::::::::::::::::::::::: :::: gi|149 LFYGNAGYRLPLPASFPAGSALGEQPPEGQFLQHRAEVQIARKLQCIADQFHRLHMQQHQ 190 200 210 220 230 240 230 240 250 mFLJ00 QNRDRAWWQVFLFLQNLALNRQENREGVGPW ::::::: :::::::::::::.::::::::: gi|149 QNRDRAWRQVFLFLQNLALNRRENREGVGPW 250 260 270 >>gi|38511854|gb|AAH60783.1| BMF protein [Homo sapiens] (261 aa) initn: 1346 init1: 1016 opt: 1352 Z-score: 1574.9 bits: 299.0 E(): 5.1e-79 Smith-Waterman score: 1352; 84.375% identity (93.750% similar) in 224 aa overlap (28-251:38-260) 10 20 30 40 50 mFLJ00 PRQLAPAAVAAAARATASHRSPLEFAPFFPIECGHQAPRVFFTLDPGAEPWHHNSEA ..: . ..:::. :::::::::::.::: gi|385 SGLLPPRPVPARRRPCLRLPPPAAARWAFSLLPNRVWASSPRVLVTLDPGAEPWHHDSEA 10 20 30 40 50 60 60 70 80 90 100 110 mFLJ00 ETLSWSHPGEMEPPQCVEELEDDVFQSEDGEPGTQPGGLLSADLFAQSQLDCPLSRLQLF ::::::::::::: :::::::::::: ::::: ::::.:::::::::: ::::::::::: gi|385 ETLSWSHPGEMEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLF 70 80 90 100 110 120 120 130 140 150 160 170 mFLJ00 PLTHCCGPGLRPISQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASF :::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: gi|385 PLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASF 130 140 150 160 170 180 180 190 200 210 220 230 mFLJ00 PAGSPLGEQPPEGQFLQHRAEVQIARKLQCIADQFHRLHTQQHQQNRDRAWWQVFLFLQN :: :.::::::::. ::.::::::::::::::::::::.::::::..:.:::..:::.: gi|385 PAVLPIGEQPPEGQW-QHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQILLFLHN 190 200 210 220 230 240 240 250 mFLJ00 LALNRQENREGVGPW :::: .:::.:.:: gi|385 LALNGEENRNGAGPR 250 260 >>gi|123236209|emb|CAM19075.1| Bcl2 modifying factor [Mu (190 aa) initn: 1347 init1: 1347 opt: 1347 Z-score: 1571.1 bits: 297.8 E(): 8.4e-79 Smith-Waterman score: 1347; 100.000% identity (100.000% similar) in 188 aa overlap (65-252:3-190) 40 50 60 70 80 90 mFLJ00 HQAPRVFFTLDPGAEPWHHNSEAETLSWSHPGEMEPPQCVEELEDDVFQSEDGEPGTQPG :::::::::::::::::::::::::::::: gi|123 MSPGEMEPPQCVEELEDDVFQSEDGEPGTQPG 10 20 30 100 110 120 130 140 150 mFLJ00 GLLSADLFAQSQLDCPLSRLQLFPLTHCCGPGLRPISQEDKATQTLSPASPSQGVMLPCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 GLLSADLFAQSQLDCPLSRLQLFPLTHCCGPGLRPISQEDKATQTLSPASPSQGVMLPCG 40 50 60 70 80 90 160 170 180 190 200 210 mFLJ00 VTEEPQRLFYGNAGYRLPLPASFPAGSPLGEQPPEGQFLQHRAEVQIARKLQCIADQFHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 VTEEPQRLFYGNAGYRLPLPASFPAGSPLGEQPPEGQFLQHRAEVQIARKLQCIADQFHR 100 110 120 130 140 150 220 230 240 250 mFLJ00 LHTQQHQQNRDRAWWQVFLFLQNLALNRQENREGVGPW :::::::::::::::::::::::::::::::::::::: gi|123 LHTQQHQQNRDRAWWQVFLFLQNLALNRQENREGVGPW 160 170 180 190 >>gi|56748562|sp|Q91ZE9.1|BMF_MOUSE RecName: Full=Bcl-2- (185 aa) initn: 1323 init1: 1323 opt: 1323 Z-score: 1543.4 bits: 292.7 E(): 2.9e-77 Smith-Waterman score: 1323; 100.000% identity (100.000% similar) in 185 aa overlap (68-252:1-185) 40 50 60 70 80 90 mFLJ00 PRVFFTLDPGAEPWHHNSEAETLSWSHPGEMEPPQCVEELEDDVFQSEDGEPGTQPGGLL :::::::::::::::::::::::::::::: gi|567 MEPPQCVEELEDDVFQSEDGEPGTQPGGLL 10 20 30 100 110 120 130 140 150 mFLJ00 SADLFAQSQLDCPLSRLQLFPLTHCCGPGLRPISQEDKATQTLSPASPSQGVMLPCGVTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|567 SADLFAQSQLDCPLSRLQLFPLTHCCGPGLRPISQEDKATQTLSPASPSQGVMLPCGVTE 40 50 60 70 80 90 160 170 180 190 200 210 mFLJ00 EPQRLFYGNAGYRLPLPASFPAGSPLGEQPPEGQFLQHRAEVQIARKLQCIADQFHRLHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|567 EPQRLFYGNAGYRLPLPASFPAGSPLGEQPPEGQFLQHRAEVQIARKLQCIADQFHRLHT 100 110 120 130 140 150 220 230 240 250 mFLJ00 QQHQQNRDRAWWQVFLFLQNLALNRQENREGVGPW ::::::::::::::::::::::::::::::::::: gi|567 QQHQQNRDRAWWQVFLFLQNLALNRQENREGVGPW 160 170 180 >>gi|56748556|sp|Q8K589.1|BMF_RAT RecName: Full=Bcl-2-mo (185 aa) initn: 1267 init1: 1267 opt: 1267 Z-score: 1478.4 bits: 280.6 E(): 1.2e-73 Smith-Waterman score: 1267; 96.216% identity (97.838% similar) in 185 aa overlap (68-252:1-185) 40 50 60 70 80 90 mFLJ00 PRVFFTLDPGAEPWHHNSEAETLSWSHPGEMEPPQCVEELEDDVFQSEDGEPGTQPGGLL :::::::::::::::: ::::::::::.:: gi|567 MEPPQCVEELEDDVFQPEDGEPGTQPGSLL 10 20 30 100 110 120 130 140 150 mFLJ00 SADLFAQSQLDCPLSRLQLFPLTHCCGPGLRPISQEDKATQTLSPASPSQGVMLPCGVTE ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|567 SADLFAQSQLDCPLSRLQLFPLTHCCGPGLRPVSQEDKATQTLSPASPSQGVMLPCGVTE 40 50 60 70 80 90 160 170 180 190 200 210 mFLJ00 EPQRLFYGNAGYRLPLPASFPAGSPLGEQPPEGQFLQHRAEVQIARKLQCIADQFHRLHT :::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|567 EPQRLFYGNAGYRLPLPASFPAGSALGEQPPEGQFLQHRAEVQIARKLQCIADQFHRLHM 100 110 120 130 140 150 220 230 240 250 mFLJ00 QQHQQNRDRAWWQVFLFLQNLALNRQENREGVGPW ::::::::::: :::::::::::::.::::::::: gi|567 QQHQQNRDRAWRQVFLFLQNLALNRRENREGVGPW 160 170 180 >>gi|73999757|ref|XP_849063.1| PREDICTED: similar to Bcl (184 aa) initn: 1172 init1: 838 opt: 1174 Z-score: 1370.4 bits: 260.7 E(): 1.3e-67 Smith-Waterman score: 1174; 89.674% identity (96.196% similar) in 184 aa overlap (68-251:1-183) 40 50 60 70 80 90 mFLJ00 PRVFFTLDPGAEPWHHNSEAETLSWSHPGEMEPPQCVEELEDDVFQSEDGEPGTQPGGLL :::::::::::::::: ::::::::::.:: gi|739 MEPPQCVEELEDDVFQPEDGEPGTQPGSLL 10 20 30 100 110 120 130 140 150 mFLJ00 SADLFAQSQLDCPLSRLQLFPLTHCCGPGLRPISQEDKATQTLSPASPSQGVMLPCGVTE :::::::::::::::::.:::::::::::::: ::::::::::::::::::::::::::: gi|739 SADLFAQSQLDCPLSRLHLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTE 40 50 60 70 80 90 160 170 180 190 200 210 mFLJ00 EPQRLFYGNAGYRLPLPASFPAGSPLGEQPPEGQFLQHRAEVQIARKLQCIADQFHRLHT ::::::::::::::::::::::: :: :::::::. ::::::::::::::::::::::: gi|739 EPQRLFYGNAGYRLPLPASFPAGLPLLEQPPEGQW-QHRAEVQIARKLQCIADQFHRLHM 100 110 120 130 140 220 230 240 250 mFLJ00 QQHQQNRDRAWWQVFLFLQNLALNRQENREGVGPW ::::::..:.:::..:::.::::: .:::.:.:: gi|739 QQHQQNQNRVWWQILLFLHNLALNADENRNGAGPR 150 160 170 180 >>gi|126278358|ref|XP_001380997.1| PREDICTED: similar to (248 aa) initn: 1169 init1: 818 opt: 1168 Z-score: 1361.6 bits: 259.5 E(): 3.9e-67 Smith-Waterman score: 1168; 72.103% identity (87.554% similar) in 233 aa overlap (21-251:17-247) 10 20 30 40 50 mFLJ00 PRQLAPAAVAAAARATASHRSPLE--FAPFFPIECGHQAPRVFFTLDPGAEPWHHNSEAE .::. : ..:. .:. .: :.:::::. ..: gi|126 MAVKSFGVYCLRGALITPLHLGFLYLLPVSVWAWSPKRS-SLGLGSEPWHHSPRTE 10 20 30 40 50 60 70 80 90 100 110 mFLJ00 TLSWSHPGEMEPPQCVEELEDDVFQSEDGEPGTQPGGLLSADLFAQSQLDCPLSRLQLFP :::::.:::::::. :::::::::. ::.:::.::::: :: :::::: : :. ::::: gi|126 TLSWSYPGEMEPPHYVEELEDDVFHPEDSEPGAQPGGLTSAALFAQSQPDYMLDGLQLFP 60 70 80 90 100 110 120 130 140 150 160 170 mFLJ00 LTHCCGPGLRPISQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFP :::::::::: ..::::::::::::::::::::::::::::.:::::::::::::::::: gi|126 LTHCCGPGLRSVGQEDKATQTLSPASPSQGVMLPCGVTEEPHRLFYGNAGYRLPLPASFP 120 130 140 150 160 170 180 190 200 210 220 230 mFLJ00 AGSPLGEQPPEGQFLQHRAEVQIARKLQCIADQFHRLHTQQHQQNRDRAWWQVFLFLQNL :. :::.::: :. .::::::::.::::::::::::: :.:::::...:::..:::.:: gi|126 ASLRLGEEPPEEQW-EHRAEVQIAQKLQCIADQFHRLHMQRHQQNRNHVWWQILLFLHNL 180 190 200 210 220 230 240 250 mFLJ00 ALNRQENREGVGPW ::::.:::.:.:: gi|126 ALNREENRNGAGPR 240 >>gi|116292143|dbj|BAF35579.1| Bcl2 modifying factor [Bo (184 aa) initn: 1164 init1: 839 opt: 1166 Z-score: 1361.1 bits: 258.9 E(): 4.1e-67 Smith-Waterman score: 1166; 88.587% identity (95.652% similar) in 184 aa overlap (68-251:1-183) 40 50 60 70 80 90 mFLJ00 PRVFFTLDPGAEPWHHNSEAETLSWSHPGEMEPPQCVEELEDDVFQSEDGEPGTQPGGLL :::::::::::::::: ::::::::: .:: gi|116 MEPPQCVEELEDDVFQPEDGEPGTQPRSLL 10 20 30 100 110 120 130 140 150 mFLJ00 SADLFAQSQLDCPLSRLQLFPLTHCCGPGLRPISQEDKATQTLSPASPSQGVMLPCGVTE :::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::: gi|116 SADLFAQSQLDCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTE 40 50 60 70 80 90 160 170 180 190 200 210 mFLJ00 EPQRLFYGNAGYRLPLPASFPAGSPLGEQPPEGQFLQHRAEVQIARKLQCIADQFHRLHT ::::::::.:::::::::::::: ::::::::::. :::::.::::::::::::::::: gi|116 EPQRLFYGHAGYRLPLPASFPAGLPLGEQPPEGQW-QHRAEIQIARKLQCIADQFHRLHM 100 110 120 130 140 220 230 240 250 mFLJ00 QQHQQNRDRAWWQVFLFLQNLALNRQENREGVGPW ::.::::.: :::..:::.:.::: .:::.:.:: gi|116 QQYQQNRNRMWWQILLFLHNVALNGDENRNGAGPR 150 160 170 180 >>gi|149692070|ref|XP_001503620.1| PREDICTED: similar to (184 aa) initn: 1159 init1: 824 opt: 1161 Z-score: 1355.3 bits: 257.9 E(): 8.7e-67 Smith-Waterman score: 1161; 89.130% identity (95.652% similar) in 184 aa overlap (68-251:1-183) 40 50 60 70 80 90 mFLJ00 PRVFFTLDPGAEPWHHNSEAETLSWSHPGEMEPPQCVEELEDDVFQSEDGEPGTQPGGLL :::::::::::::::: ::::::::: .:: gi|149 MEPPQCVEELEDDVFQPEDGEPGTQPRSLL 10 20 30 100 110 120 130 140 150 mFLJ00 SADLFAQSQLDCPLSRLQLFPLTHCCGPGLRPISQEDKATQTLSPASPSQGVMLPCGVTE :::::: ::::::::.:.:::::::::::::: ::::::::::::::::::::::::::: gi|149 SADLFAPSQLDCPLSHLRLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTE 40 50 60 70 80 90 160 170 180 190 200 210 mFLJ00 EPQRLFYGNAGYRLPLPASFPAGSPLGEQPPEGQFLQHRAEVQIARKLQCIADQFHRLHT ::::::::::::::::::::::: ::::::::::. ::::::::::::::::::::::: gi|149 EPQRLFYGNAGYRLPLPASFPAGLPLGEQPPEGQW-QHRAEVQIARKLQCIADQFHRLHM 100 110 120 130 140 220 230 240 250 mFLJ00 QQHQQNRDRAWWQVFLFLQNLALNRQENREGVGPW :::::::.:.:::..:::.::::: .:::.:.:: gi|149 QQHQQNRNRVWWQTLLFLHNLALNGDENRNGAGPR 150 160 170 180 252 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 15:12:30 2009 done: Thu Mar 12 15:17:47 2009 Total Scan time: 741.480 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]