# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj02086.fasta.nr -Q ../query/mKIAA1238.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1238, 455 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919349 sequences Expectation_n fit: rho(ln(x))= 5.4736+/-0.000187; mu= 10.6362+/- 0.010 mean_var=87.6831+/-16.930, 0's: 27 Z-trim: 35 B-trim: 2 in 1/66 Lambda= 0.136967 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|81895264|sp|Q80WS1.1|RIMKB_MOUSE RecName: Full= ( 387) 2566 516.8 3.8e-144 gi|109472534|ref|XP_342750.3| PREDICTED: hypotheti ( 387) 2533 510.2 3.5e-142 gi|109095606|ref|XP_001118430.1| PREDICTED: hypoth ( 455) 2531 509.9 5.2e-142 gi|73997696|ref|XP_543825.2| PREDICTED: hypothetic ( 428) 2528 509.3 7.6e-142 gi|194037858|ref|XP_001927870.1| PREDICTED: hypoth ( 386) 2503 504.3 2.1e-140 gi|194211666|ref|XP_001916098.1| PREDICTED: hypoth ( 386) 2502 504.1 2.5e-140 gi|122145573|sp|Q0VCE9.1|RIMKB_BOVIN RecName: Full ( 386) 2490 501.7 1.3e-139 gi|126340001|ref|XP_001368145.1| PREDICTED: simila ( 386) 2486 500.9 2.2e-139 gi|224043768|ref|XP_002192984.1| PREDICTED: simila ( 386) 2418 487.5 2.4e-135 gi|26333243|dbj|BAC30339.1| unnamed protein produc ( 330) 2180 440.4 3.1e-121 gi|119609015|gb|EAW88609.1| family with sequence s ( 307) 1877 380.5 3.1e-103 gi|82181081|sp|Q66HZ2.1|RIMKB_DANRE RecName: Full= ( 405) 1830 371.3 2.4e-100 gi|47211272|emb|CAF96644.1| unnamed protein produc ( 401) 1826 370.5 4.1e-100 gi|126330260|ref|XP_001367054.1| PREDICTED: simila ( 391) 1779 361.2 2.5e-97 gi|109003352|ref|XP_001088222.1| PREDICTED: simila ( 645) 1749 355.5 2.2e-95 gi|73976733|ref|XP_539562.2| PREDICTED: similar to ( 391) 1744 354.3 3e-95 gi|114556069|ref|XP_001164308.1| PREDICTED: family ( 695) 1733 352.4 2.1e-94 gi|143458650|sp|Q8IXN7.2|RIMKA_HUMAN RecName: Full ( 391) 1728 351.2 2.7e-94 gi|109477129|ref|XP_001073980.1| PREDICTED: simila ( 507) 1697 345.1 2.3e-92 gi|149035428|gb|EDL90109.1| rCG50366 [Rattus norve ( 380) 1685 342.7 9.6e-92 gi|148698492|gb|EDL30439.1| cDNA sequence BC057371 ( 411) 1685 342.7 1e-91 gi|26338610|dbj|BAC32976.1| unnamed protein produc ( 380) 1677 341.1 2.9e-91 gi|81885742|sp|Q6PFX8.1|RIMKA_MOUSE RecName: Full= ( 380) 1677 341.1 2.9e-91 gi|24981035|gb|AAH39737.1| Family with sequence si ( 350) 1530 312.0 1.5e-82 gi|12855934|dbj|BAB30506.1| unnamed protein produc ( 251) 1525 310.9 2.3e-82 gi|194207613|ref|XP_001497561.2| PREDICTED: simila ( 482) 1521 310.3 6.6e-82 gi|40225326|gb|AAH21977.2| FAM80B protein [Homo sa ( 236) 1503 306.5 4.5e-81 gi|194665882|ref|XP_583916.4| PREDICTED: similar t ( 340) 1491 304.3 3.1e-80 gi|169145664|emb|CAQ14794.1| novel protein similar ( 265) 1462 298.5 1.4e-78 gi|109108130|ref|XP_001092272.1| PREDICTED: hypoth ( 506) 1365 279.5 1.3e-72 gi|170284849|gb|AAI61236.1| LOC100145548 protein [ ( 315) 1341 274.6 2.4e-71 gi|149508734|ref|XP_001511443.1| PREDICTED: simila ( 236) 1260 258.5 1.3e-66 gi|149435377|ref|XP_001519475.1| PREDICTED: hypoth ( 273) 751 158.0 2.7e-36 gi|169145665|emb|CAQ14795.1| novel protein similar ( 98) 586 125.0 8.2e-27 gi|55665381|emb|CAH70661.1| family with sequence s ( 97) 571 122.0 6.4e-26 gi|19915214|gb|AAM04777.1| ribosomal protein S6 mo ( 301) 492 106.8 7.5e-21 gi|20906929|gb|AAM32043.1| Ribosomal protein S6 mo ( 301) 491 106.6 8.6e-21 gi|119767634|gb|ABM00205.1| ribosomal protein S6 m ( 309) 478 104.1 5.2e-20 gi|117613180|gb|ABK48634.1| alpha-L-glutamate liga ( 338) 471 102.7 1.4e-19 gi|120559178|gb|ABM25105.1| alpha-L-glutamate liga ( 331) 468 102.1 2.1e-19 gi|24348136|gb|AAN55242.1|AE015662_4 ribosomal pro ( 330) 465 101.5 3.2e-19 gi|113885216|gb|ABI39268.1| alpha-L-glutamate liga ( 336) 465 101.5 3.3e-19 gi|88816844|gb|EAR26665.1| ribosomal protein S6 mo ( 312) 460 100.5 6.1e-19 gi|125997279|gb|ABN61354.1| alpha-L-glutamate liga ( 328) 460 100.5 6.4e-19 gi|160860519|gb|ABX49053.1| alpha-L-glutamate liga ( 328) 459 100.4 7.3e-19 gi|151364977|gb|ABS07977.1| alpha-L-glutamate liga ( 328) 459 100.4 7.3e-19 gi|113889209|gb|ABI43260.1| alpha-L-glutamate liga ( 336) 458 100.2 8.5e-19 gi|153091028|gb|EDN73033.1| ribosomal protein S6-- ( 303) 405 89.7 1.1e-15 gi|198258989|gb|EDY83297.1| alpha-L-glutamate liga ( 407) 401 89.0 2.4e-15 gi|83849711|gb|EAP87579.1| Glutathione synthase [C ( 292) 398 88.3 2.8e-15 >>gi|81895264|sp|Q80WS1.1|RIMKB_MOUSE RecName: Full=Ribo (387 aa) initn: 2566 init1: 2566 opt: 2566 Z-score: 2744.1 bits: 516.8 E(): 3.8e-144 Smith-Waterman score: 2566; 100.000% identity (100.000% similar) in 387 aa overlap (69-455:1-387) 40 50 60 70 80 90 mKIAA1 GGRPGRRGRSRRPEKSLHQLIQKRKNKQTEMCSSVTGKLWFLTDRRIREDYPQKEILRAL :::::::::::::::::::::::::::::: gi|818 MCSSVTGKLWFLTDRRIREDYPQKEILRAL 10 20 30 100 110 120 130 140 150 mKIAA1 KAKCCEEELDFRAVVMDEMVLTVEQGNLGLRISGELISAYPQVVVVRVPTPWVQSDSDIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 KAKCCEEELDFRAVVMDEMVLTVEQGNLGLRISGELISAYPQVVVVRVPTPWVQSDSDIT 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 VLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 VLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEV 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 LEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVIVVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 LEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVIVVG 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA1 GRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGTDVCGIDLLMKDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 GRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGTDVCGIDLLMKDD 220 230 240 250 260 270 340 350 360 370 380 390 mKIAA1 GSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSLLSVVSTASETSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 GSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSLLSVVSTASETSE 280 290 300 310 320 330 400 410 420 430 440 450 mKIAA1 PELGPPASAAVDNMSASSSSVDSDPESTTEREMLTKLPGGLFNMNQLLANEIKLLVE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 PELGPPASAAVDNMSASSSSVDSDPESTTEREMLTKLPGGLFNMNQLLANEIKLLVE 340 350 360 370 380 >>gi|109472534|ref|XP_342750.3| PREDICTED: hypothetical (387 aa) initn: 2533 init1: 2533 opt: 2533 Z-score: 2708.9 bits: 510.2 E(): 3.5e-142 Smith-Waterman score: 2533; 98.191% identity (99.742% similar) in 387 aa overlap (69-455:1-387) 40 50 60 70 80 90 mKIAA1 GGRPGRRGRSRRPEKSLHQLIQKRKNKQTEMCSSVTGKLWFLTDRRIREDYPQKEILRAL :::::.:::::::::::.:::::::::::: gi|109 MCSSVSGKLWFLTDRRIQEDYPQKEILRAL 10 20 30 100 110 120 130 140 150 mKIAA1 KAKCCEEELDFRAVVMDEMVLTVEQGNLGLRISGELISAYPQVVVVRVPTPWVQSDSDIT ::::::::::::::::::.:::::::::::::.::::::::::::::::::::::::::: gi|109 KAKCCEEELDFRAVVMDEVVLTVEQGNLGLRINGELISAYPQVVVVRVPTPWVQSDSDIT 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 VLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEV :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|109 VLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFSKMIDEAEV 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 LEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVIVVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVIVVG 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA1 GRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGTDVCGIDLLMKDD ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|109 GRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDD 220 230 240 250 260 270 340 350 360 370 380 390 mKIAA1 GSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSLLSVVSTASETSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSLLSVVSTASETSE 280 290 300 310 320 330 400 410 420 430 440 450 mKIAA1 PELGPPASAAVDNMSASSSSVDSDPESTTEREMLTKLPGGLFNMNQLLANEIKLLVE ::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|109 PELGPPASAAVDNMSASSSSVDSDPESTTERELLTKLPGGLFNMNQLLANEIKLLVE 340 350 360 370 380 >>gi|109095606|ref|XP_001118430.1| PREDICTED: hypothetic (455 aa) initn: 2542 init1: 2377 opt: 2531 Z-score: 2705.8 bits: 509.9 E(): 5.2e-142 Smith-Waterman score: 2531; 94.987% identity (98.747% similar) in 399 aa overlap (57-455:58-455) 30 40 50 60 70 80 mKIAA1 QRTSRGPRLLLGGGRPGRRGRSRRPEKSLHQLIQKRKNKQTEMCSSVTGKLWFLTDRRIR ..:: ::.: .:::::..::::::::::: gi|109 AHYRKHHGKYSHFNEYNRNIPPISRHYIQEEIIQARKHKLIKMCSSVAAKLWFLTDRRIR 30 40 50 60 70 80 90 100 110 120 130 140 mKIAA1 EDYPQKEILRALKAKCCEEELDFRAVVMDEMVLTVEQGNLGLRISGELISAYPQVVVVRV ::::::::::::::::::::::::::::::.:::.:::::::::.::::.:::::::::: gi|109 EDYPQKEILRALKAKCCEEELDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRV 90 100 110 120 130 140 150 160 170 180 190 200 mKIAA1 PTPWVQSDSDITVLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PTPWVQSDSDITVLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGH 150 160 170 180 190 200 210 220 230 240 250 260 mKIAA1 ENFAKMIDEAEVLEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|109 ENFAKMIDEAEVLEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKE 210 220 230 240 250 260 270 280 290 300 310 320 mKIAA1 SHGRDVRVIVVGGRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGT ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SHGRDVRVIVVGGRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGM 270 280 290 300 310 320 330 340 350 360 370 380 mKIAA1 DVCGIDLLMKDDGSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSL ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|109 DVCGIDLLMKDDGSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSL 330 340 350 360 370 380 390 400 410 420 430 440 mKIAA1 LSVVSTASETSEPELGPPASAAVDNMSASSSSVDSDPESTTEREMLTKLPGGLFNMNQLL ::::::::::::::::::::.::::::::::::::::::: :::.::::::::::::::: gi|109 LSVVSTASETSEPELGPPASTAVDNMSASSSSVDSDPEST-ERELLTKLPGGLFNMNQLL 390 400 410 420 430 440 450 mKIAA1 ANEIKLLVE ::::::::. gi|109 ANEIKLLVD 450 >>gi|73997696|ref|XP_543825.2| PREDICTED: hypothetical p (428 aa) initn: 2377 init1: 2377 opt: 2528 Z-score: 2702.9 bits: 509.3 E(): 7.6e-142 Smith-Waterman score: 2528; 95.696% identity (99.241% similar) in 395 aa overlap (61-455:35-428) 40 50 60 70 80 90 mKIAA1 RGPRLLLGGGRPGRRGRSRRPEKSLHQLIQKRKNKQTEMCSSVTGKLWFLTDRRIREDYP :::.:: .:::::..::::::::::::::: gi|739 MVMLTCMIYRELLHNYMRLKNRHSGRNNPGKRKSKQIKMCSSVAAKLWFLTDRRIREDYP 10 20 30 40 50 60 100 110 120 130 140 150 mKIAA1 QKEILRALKAKCCEEELDFRAVVMDEMVLTVEQGNLGLRISGELISAYPQVVVVRVPTPW ::::::::::::::::::::::::::.:::.:::::::::.::::.:::::::::::::: gi|739 QKEILRALKAKCCEEELDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRVPTPW 70 80 90 100 110 120 160 170 180 190 200 210 mKIAA1 VQSDSDITVLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VQSDSDITVLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFA 130 140 150 160 170 180 220 230 240 250 260 270 mKIAA1 KMIDEAEVLEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGR :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|739 KMIDEAEVLEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGR 190 200 210 220 230 240 280 290 300 310 320 330 mKIAA1 DVRVIVVGGRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGTDVCG ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|739 DVRVIVVGGRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCG 250 260 270 280 290 300 340 350 360 370 380 390 mKIAA1 IDLLMKDDGSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSLLSVV ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|739 IDLLMKDDGSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVV 310 320 330 340 350 360 400 410 420 430 440 450 mKIAA1 STASETSEPELGPPASAAVDNMSASSSSVDSDPESTTEREMLTKLPGGLFNMNQLLANEI ::::::::::::::::.::::::::::::::::::: :::.:::::::.::::::.:::: gi|739 STASETSEPELGPPASTAVDNMSASSSSVDSDPEST-ERELLTKLPGGVFNMNQLIANEI 370 380 390 400 410 420 mKIAA1 KLLVE ::::: gi|739 KLLVE >>gi|194037858|ref|XP_001927870.1| PREDICTED: hypothetic (386 aa) initn: 2342 init1: 2342 opt: 2503 Z-score: 2676.9 bits: 504.3 E(): 2.1e-140 Smith-Waterman score: 2503; 97.158% identity (99.483% similar) in 387 aa overlap (69-455:1-386) 40 50 60 70 80 90 mKIAA1 GGRPGRRGRSRRPEKSLHQLIQKRKNKQTEMCSSVTGKLWFLTDRRIREDYPQKEILRAL :::::..::::::::::::::::::::::: gi|194 MCSSVAAKLWFLTDRRIREDYPQKEILRAL 10 20 30 100 110 120 130 140 150 mKIAA1 KAKCCEEELDFRAVVMDEMVLTVEQGNLGLRISGELISAYPQVVVVRVPTPWVQSDSDIT ::::::::::::::::::.:::.:::::::::.::::.:::::::::::::::::::::: gi|194 KAKCCEEELDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDSDIT 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 VLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEV 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 LEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVIVVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVIVVG 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA1 GRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGTDVCGIDLLMKDD ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|194 GRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDD 220 230 240 250 260 270 340 350 360 370 380 390 mKIAA1 GSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSLLSVVSTASETSE ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|194 GSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVVSTASETSE 280 290 300 310 320 330 400 410 420 430 440 450 mKIAA1 PELGPPASAAVDNMSASSSSVDSDPESTTEREMLTKLPGGLFNMNQLLANEIKLLVE ::::::::.::::::::::::::::: :::::.:::::::::::::::::::::::: gi|194 PELGPPASTAVDNMSASSSSVDSDPE-TTERELLTKLPGGLFNMNQLLANEIKLLVE 340 350 360 370 380 >>gi|194211666|ref|XP_001916098.1| PREDICTED: hypothetic (386 aa) initn: 2344 init1: 2344 opt: 2502 Z-score: 2675.8 bits: 504.1 E(): 2.5e-140 Smith-Waterman score: 2502; 96.899% identity (99.483% similar) in 387 aa overlap (69-455:1-386) 40 50 60 70 80 90 mKIAA1 GGRPGRRGRSRRPEKSLHQLIQKRKNKQTEMCSSVTGKLWFLTDRRIREDYPQKEILRAL :::::..::::::::::::::::::::::: gi|194 MCSSVAAKLWFLTDRRIREDYPQKEILRAL 10 20 30 100 110 120 130 140 150 mKIAA1 KAKCCEEELDFRAVVMDEMVLTVEQGNLGLRISGELISAYPQVVVVRVPTPWVQSDSDIT ::::::::::::::::::.:::.:::::::::.::::.:::::::::::::::::::::: gi|194 KAKCCEEELDFRAVVMDEVVLTIEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDSDIT 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 VLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEV 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 LEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVIVVG :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|194 LEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRDVRVIVVG 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA1 GRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGTDVCGIDLLMKDD ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|194 GRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDD 220 230 240 250 260 270 340 350 360 370 380 390 mKIAA1 GSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSLLSVVSTASETSE ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|194 GSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVVSTASETSE 280 290 300 310 320 330 400 410 420 430 440 450 mKIAA1 PELGPPASAAVDNMSASSSSVDSDPESTTEREMLTKLPGGLFNMNQLLANEIKLLVE ::::::::.::::::::::::::::::: :::.:::::::::::::::::::::::: gi|194 PELGPPASTAVDNMSASSSSVDSDPEST-ERELLTKLPGGLFNMNQLLANEIKLLVE 340 350 360 370 380 >>gi|122145573|sp|Q0VCE9.1|RIMKB_BOVIN RecName: Full=Rib (386 aa) initn: 2329 init1: 2329 opt: 2490 Z-score: 2663.0 bits: 501.7 E(): 1.3e-139 Smith-Waterman score: 2490; 96.641% identity (99.225% similar) in 387 aa overlap (69-455:1-386) 40 50 60 70 80 90 mKIAA1 GGRPGRRGRSRRPEKSLHQLIQKRKNKQTEMCSSVTGKLWFLTDRRIREDYPQKEILRAL :::::..::::::::::::::::::::::: gi|122 MCSSVAAKLWFLTDRRIREDYPQKEILRAL 10 20 30 100 110 120 130 140 150 mKIAA1 KAKCCEEELDFRAVVMDEMVLTVEQGNLGLRISGELISAYPQVVVVRVPTPWVQSDSDIT ::::::::::::::::::.:::::::::::::.::::.:::::::::::::::::::::: gi|122 KAKCCEEELDFRAVVMDELVLTVEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDSDIT 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 VLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 VLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEV 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 LEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVIVVG :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|122 LEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRDVRVIVVG 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA1 GRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGTDVCGIDLLMKDD ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|122 GRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDD 220 230 240 250 260 270 340 350 360 370 380 390 mKIAA1 GSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSLLSVVSTASETSE ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|122 GSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPSGRLTRRMSLLSVVSTASETSE 280 290 300 310 320 330 400 410 420 430 440 450 mKIAA1 PELGPPASAAVDNMSASSSSVDSDPESTTEREMLTKLPGGLFNMNQLLANEIKLLVE ::::: :..::::::::::::::::: :::::.:::::::::::::::::::::::: gi|122 PELGPQANTAVDNMSASSSSVDSDPE-TTERELLTKLPGGLFNMNQLLANEIKLLVE 340 350 360 370 380 >>gi|126340001|ref|XP_001368145.1| PREDICTED: similar to (386 aa) initn: 2325 init1: 2325 opt: 2486 Z-score: 2658.7 bits: 500.9 E(): 2.2e-139 Smith-Waterman score: 2486; 96.124% identity (99.225% similar) in 387 aa overlap (69-455:1-386) 40 50 60 70 80 90 mKIAA1 GGRPGRRGRSRRPEKSLHQLIQKRKNKQTEMCSSVTGKLWFLTDRRIREDYPQKEILRAL :::::...:::::::::::::::.:::::: gi|126 MCSSVAARLWFLTDRRIREDYPQQEILRAL 10 20 30 100 110 120 130 140 150 mKIAA1 KAKCCEEELDFRAVVMDEMVLTVEQGNLGLRISGELISAYPQVVVVRVPTPWVQSDSDIT ::::::::::::::::::.:::::::::::::.::::.:::::::::::::::::::::: gi|126 KAKCCEEELDFRAVVMDEVVLTVEQGNLGLRINGELITAYPQVVVVRVPTPWVQSDSDIT 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 VLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 VLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEV 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 LEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVIVVG :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|126 LEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYVKESHGRDVRVIVVG 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA1 GRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGTDVCGIDLLMKDD ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|126 GRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGMDVCGIDLLMKDD 220 230 240 250 260 270 340 350 360 370 380 390 mKIAA1 GSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSLLSVVSTASETSE :::::::::::::::::::::::::::.:::::.:::: ::::::::::::::::::::: gi|126 GSFCVCEANANVGFIAFDKACNLDVAGMIADYATSLLPPGRLTRRMSLLSVVSTASETSE 280 290 300 310 320 330 400 410 420 430 440 450 mKIAA1 PELGPPASAAVDNMSASSSSVDSDPESTTEREMLTKLPGGLFNMNQLLANEIKLLVE ::::::::.::::::::::::::::: :::::.:::::::::::::::::::::::: gi|126 PELGPPASTAVDNMSASSSSVDSDPE-TTERELLTKLPGGLFNMNQLLANEIKLLVE 340 350 360 370 380 >>gi|224043768|ref|XP_002192984.1| PREDICTED: similar to (386 aa) initn: 2288 init1: 2265 opt: 2418 Z-score: 2586.1 bits: 487.5 E(): 2.4e-135 Smith-Waterman score: 2418; 93.282% identity (97.933% similar) in 387 aa overlap (69-455:1-386) 40 50 60 70 80 90 mKIAA1 GGRPGRRGRSRRPEKSLHQLIQKRKNKQTEMCSSVTGKLWFLTDRRIREDYPQKEILRAL :::::. .:::::::::::::::.:::::: gi|224 MCSSVAPRLWFLTDRRIREDYPQQEILRAL 10 20 30 100 110 120 130 140 150 mKIAA1 KAKCCEEELDFRAVVMDEMVLTVEQGNLGLRISGELISAYPQVVVVRVPTPWVQSDSDIT :::::::::::::.::::.:::.:.::::::..::::.:::::::::::::::::::::: gi|224 KAKCCEEELDFRALVMDEVVLTIEDGNLGLRVKGELITAYPQVVVVRVPTPWVQSDSDIT 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA1 VLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDEAEV :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|224 VLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFSKMIDEAEV 100 110 120 130 140 150 220 230 240 250 260 270 mKIAA1 LEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVIVVG ::::::::::::::::::::::::::::::::::::.::::::::.:::::.:::::::: gi|224 LEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHDAPYLFQKYVKESHGKDVRVIVVG 160 170 180 190 200 210 280 290 300 310 320 330 mKIAA1 GRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGTDVCGIDLLMKDD :::::::::::::::::::::::::::::::::::::::.::::::: :::::::::::: gi|224 GRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAVQVSNILGMDVCGIDLLMKDD 220 230 240 250 260 270 340 350 360 370 380 390 mKIAA1 GSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSLLSVVSTASETSE ::: ::::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|224 GSFYVCEANANVGFIAFDKACNLDVAGIIADYAASLLAPGRLTRRMSLLSVVSTASETSE 280 290 300 310 320 330 400 410 420 430 440 450 mKIAA1 PELGPPASAAVDNMSASSSSVDSDPESTTEREMLTKLPGGLFNMNQLLANEIKLLVE :::::: .:::::::::: ::::::: :::::.::::::.::::::::::::::::: gi|224 PELGPPPGAAVDNMSASSCSVDSDPE-TTERELLTKLPGALFNMNQLLANEIKLLVE 340 350 360 370 380 >>gi|26333243|dbj|BAC30339.1| unnamed protein product [M (330 aa) initn: 2180 init1: 2180 opt: 2180 Z-score: 2332.8 bits: 440.4 E(): 3.1e-121 Smith-Waterman score: 2180; 99.697% identity (100.000% similar) in 330 aa overlap (126-455:1-330) 100 110 120 130 140 150 mKIAA1 RALKAKCCEEELDFRAVVMDEMVLTVEQGNLGLRISGELISAYPQVVVVRVPTPWVQSDS .::::::::::::::::::::::::::::: gi|263 MGLRISGELISAYPQVVVVRVPTPWVQSDS 10 20 30 160 170 180 190 200 210 mKIAA1 DITVLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DITVLRHLEKMGCRLMNRPQAILNCVNKFWTFQELAGHGVPLPDTFSYGGHENFAKMIDE 40 50 60 70 80 90 220 230 240 250 260 270 mKIAA1 AEVLEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 AEVLEFPMVVKNTRGHRGKAVFLARDKHHLADLSHLIRHEAPYLFQKYIKESHGRDVRVI 100 110 120 130 140 150 280 290 300 310 320 330 mKIAA1 VVGGRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGTDVCGIDLLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VVGGRVVGTMLRCSTDGRMQSNCSLGGVGMMCSLSEQGKQLAIQVSNILGTDVCGIDLLM 160 170 180 190 200 210 340 350 360 370 380 390 mKIAA1 KDDGSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSLLSVVSTASE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KDDGSFCVCEANANVGFIAFDKACNLDVAGIIADYAASLLPAGRLTRRMSLLSVVSTASE 220 230 240 250 260 270 400 410 420 430 440 450 mKIAA1 TSEPELGPPASAAVDNMSASSSSVDSDPESTTEREMLTKLPGGLFNMNQLLANEIKLLVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 TSEPELGPPASAAVDNMSASSSSVDSDPESTTEREMLTKLPGGLFNMNQLLANEIKLLVE 280 290 300 310 320 330 455 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 08:40:05 2009 done: Fri Mar 13 08:46:47 2009 Total Scan time: 906.900 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]