Comparison of KIAA cDNA sequences between mouse and human (KIAA1238)
<<Original sequence data>>
mouse mKIAA1238 (mfj02086) length: 4024 bp, CDS: 72 - 1439
human KIAA1238 (fh09938) length: 5393 bp, CDS: 760 - 1986
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 216 - 798 105 130 55.3
CDS: 799 - 1998 1085 113 9.4
3'UTR: 1999 - 4982 1900 663 25.9
amino acid
CDS: 799 - 1998 380 19 4.8
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mfj02086 1 .................................................. 1
fh09938 1 GGGGAACAGCAAATTCAGTCACAGACAATCCTCCACTCGGTCAAGAGCCA 50
51 ----+----*----+----*----+----*----+----*----+----* 100
mfj02086 1 .................................................. 1
fh09938 51 CTTTTCTCTTCCTGCCTTGCCCCCCCGCAGGGGGTAAGGAACTGAGCGTT 100
101 ----+----*----+----*----+----*----+----*----+----* 150
mfj02086 1 .................................................. 1
fh09938 101 TAATCTTTAGCCGGTTGGCTACCAGCTAAAATTCTACTTATCTTAGTTTC 150
151 ----+----*----+----*----+----*----+----*----+----* 200
mfj02086 1 .................................................. 1
fh09938 151 TAGTGGATAGCTTTCTTATTTTGCCCATGTTTTCTTAGAATCCCTGTTTA 200
201 ----+----*----+----*----+----*----+----*----+----* 250
mfj02086 1 ...............TGCGGGCGTCGGGGGGAGGGAGGGAGAG....... 28
| | || || | | ||||||||
fh09938 201 ATATACTTTTGTCAGTAGTAGTATCTAGGAGTAGCAGGGAGAGTGACAAT 250
251 ----+----*----+----*----+----*----+----*----+----* 300
mfj02086 29 .................................................. 29
fh09938 251 AAATTAGCCCCTTCTTTTTTCCCTTGTCATTCAGGCCCCTTTTCCTCTCC 300
301 ----+----*----+----*----+----*----+----*----+----* 350
mfj02086 29 .................................................. 29
fh09938 301 AGAGGGAAATTACCAGTAAACTCTTCTAAATCTTCCACCCCTTCTCAGTC 350
351 ----+----*----+----*----+----*----+----*----+----* 400
mfj02086 29 .................................................. 29
fh09938 351 ATACTGTGAAGAAACACACTAAAGTGGACATTATTTGACCAGTGAACACG 400
401 ----+----*----+----*----+----*----+----*----+----* 450
mfj02086 29 .................................................. 29
fh09938 401 AACCCAGCTTCAGGCATTGGTTTGTTGTGGCACATGGAGAAACATCTCTT 450
451 ----+----*----+----*----+----*----+----*----+----* 500
mfj02086 29 .................................................. 29
fh09938 451 TTAAAATATCTCCCAATTACCCTTTTCACAATTTGTATCCACCTAGGATT 500
501 ----+----*----+----*----+----*----+----*----+----* 550
mfj02086 29 .................................................. 29
fh09938 501 TGCTGCTGGGGTAAGTCACTAGATTTATTTCTCAAAGCTCCCCTCTCTAT 550
551 ----+----*----+----*----+----*----+----*----+----* 600
mfj02086 29 ..GCCGGCCGACCGCGAGGCCGTGAGAA..AGTGGGCGAGTGGGTGAGGA 74
|| | ||| | || ||| | ||| || || ||| |||
fh09938 551 GAGCTGAAAGACTGACCAACCATGAACACTAGTAGGGGATGGGGAAAGGG 600
601 ----+----*----+----*----+----*----+----*----+----* 650
mfj02086 75 CGCGCGGCCTGGCTGCGGGAGCCGGCGGCGAGGAGAAAGGAGGCGGCTCC 124
| || || | || ||| ||||| |
fh09938 601 GACAGAGCAGAGCCAGTTGTTCCACACTTTGGGAAGCAGGAGTAG..... 645
651 ----+----*----+----*----+----*----+----*----+----* 700
mfj02086 125 CGGCATCCCGCCCCCTCCCCCTCCTCAGCGGACTTCCCG.CGGCCCGCGC 173
| | || || || ||| | | | | | |
fh09938 646 ....CTTTTATCATCTTCCTCTGGGGAGCAGGCATAGAGACATAAACTGA 691
701 ----+----*----+----*----+----*----+----*----+----* 750
mfj02086 174 TTGCTCCTAGGCGGCGGCCGGCCGGGCAGGCGAGGGAGGAGCCGGCGGCC 223
|| | || || || | | | | || | | | |
fh09938 692 GTGAAAATGGGTGGAGGAAGAACTTCTATACCCACGAACAACATGTGAAG 741
751 ----+----*----+----*----+----*----+----*----+----* 800
Q
mfj02086 224 AGAAAAAAGTTTACAT................................CA 241
||| | || |||| |
fh09938 742 AGAGAGAACCAAACATAAAGTAAGGAGGGTAGACGTTACATCCAAGAGGA 791
S K E G R R Y I Q E E
801 ----+----*----+----*----+----*----+----*----+----* 850
L I Q K R K N K Q T E M C S S V T
mfj02086 242 ACTAATCCAGAAAAGGAAGAACAAGCAGACCGAGATGTGTAGCTCAGTGA 291
| |||||||| ||||||| |||||| || | |||||||||| || |||
fh09938 792 AATAATCCAGGCAAGGAAGCACAAGCTGATCAAGATGTGTAGTTCTGTGG 841
I I Q A R K H K L I K M C S S V A
851 ----+----*----+----*----+----*----+----*----+----* 900
G K L W F L T D R R I R E D Y P
mfj02086 292 CTGGTAAGCTGTGGTTCTTGACAGATCGTCGCATCAGGGAAGACTACCCA 341
||| ||| ||||||| ||||||||||||||||||||||||||||| ||
fh09938 842 CTGCCAAGTTGTGGTTTTTGACAGATCGTCGCATCAGGGAAGACTATCCT 891
A K L W F L T D R R I R E D Y P
901 ----+----*----+----*----+----*----+----*----+----* 950
Q K E I L R A L K A K C C E E E L
mfj02086 342 CAGAAAGAGATCTTACGAGCGTTGAAGGCCAAATGTTGTGAAGAGGAATT 391
|| |||||||| |||||||| |||||||||||||||||||| |||||| |
fh09938 892 CAAAAAGAGATTTTACGAGCATTGAAGGCCAAATGTTGTGAGGAGGAACT 941
Q K E I L R A L K A K C C E E E L
951 ----+----*----+----*----+----*----+----*----+----* 1000
D F R A V V M D E M V L T V E Q G
mfj02086 392 GGACTTTCGGGCTGTGGTGATGGATGAGATGGTGCTGACGGTCGAGCAAG 441
||||||| |||||||||||||||||||| |||||||||| |||||||||
fh09938 942 GGACTTTAGGGCTGTGGTGATGGATGAGGTGGTGCTGACAATCGAGCAAG 991
D F R A V V M D E V V L T I E Q G
1001 ----+----*----+----*----+----*----+----*----+----* 1050
N L G L R I S G E L I S A Y P Q
mfj02086 442 GAAATCTGGGTCTTCGGATCAGTGGAGAGCTAATCTCTGCCTACCCACAG 491
|||| |||||||| ||||||| ||||||||||||| |||||||||||||
fh09938 992 GAAACCTGGGTCTGCGGATCAATGGAGAGCTAATCACTGCCTACCCACAA 1041
N L G L R I N G E L I T A Y P Q
1051 ----+----*----+----*----+----*----+----*----+----* 1100
V V V V R V P T P W V Q S D S D I
mfj02086 492 GTGGTGGTAGTGAGAGTTCCAACCCCATGGGTGCAGAGTGATAGTGATAT 541
||||||||||| ||||| |||||||| |||||||| ||||||||||| ||
fh09938 1042 GTGGTGGTAGTCAGAGTACCAACCCCTTGGGTGCAAAGTGATAGTGACAT 1091
V V V V R V P T P W V Q S D S D I
1101 ----+----*----+----*----+----*----+----*----+----* 1150
T V L R H L E K M G C R L M N R P
mfj02086 542 TACTGTTTTGCGCCACCTAGAGAAGATGGGATGCCGATTGATGAACCGAC 591
|||||||||||||| ||||||||||||||||| || || ||||||||||
fh09938 1092 CACTGTTTTGCGCCATCTAGAGAAGATGGGATGTCGGTTAATGAACCGAC 1141
T V L R H L E K M G C R L M N R P
1151 ----+----*----+----*----+----*----+----*----+----* 1200
Q A I L N C V N K F W T F Q E L
mfj02086 592 CTCAAGCCATCCTTAACTGTGTTAATAAATTCTGGACATTCCAAGAGTTA 641
||||||||||||| ||||| |||||||| ||||||||||| ||||||||
fh09938 1142 CTCAAGCCATCCTGAACTGCGTTAATAAGTTCTGGACATTTCAAGAGTTG 1191
Q A I L N C V N K F W T F Q E L
1201 ----+----*----+----*----+----*----+----*----+----* 1250
A G H G V P L P D T F S Y G G H E
mfj02086 642 GCTGGCCATGGTGTGCCTCTTCCAGATACTTTTTCTTACGGTGGCCACGA 691
|||||||||||||| ||||| || |||||||| ||||| |||||||||||
fh09938 1192 GCTGGCCATGGTGTTCCTCTGCCGGATACTTTCTCTTATGGTGGCCACGA 1241
A G H G V P L P D T F S Y G G H E
1251 ----+----*----+----*----+----*----+----*----+----* 1300
N F A K M I D E A E V L E F P M V
mfj02086 692 AAACTTTGCTAAGATGATTGATGAAGCAGAAGTGCTGGAGTTCCCAATGG 741
||| |||||||| ||||||||||| || ||||| ||||||||||||||||
fh09938 1242 AAATTTTGCTAAAATGATTGATGAGGCTGAAGTTCTGGAGTTCCCAATGG 1291
N F A K M I D E A E V L E F P M V
1301 ----+----*----+----*----+----*----+----*----+----* 1350
V K N T R G H R G K A V F L A R
mfj02086 742 TAGTGAAGAATACAAGGGGTCATAGAGGCAAAGCTGTTTTCTTGGCACGA 791
|||| |||||||| ||||||| ||||| ||||||||||||||||| |||
fh09938 1292 TAGTAAAGAATACGCGGGGTCACAGAGGTAAAGCTGTTTTCTTGGCTCGA 1341
V K N T R G H R G K A V F L A R
1351 ----+----*----+----*----+----*----+----*----+----* 1400
D K H H L A D L S H L I R H E A P
mfj02086 792 GATAAACACCATTTAGCGGATCTAAGCCATCTTATTCGGCATGAAGCTCC 841
||||| |||||||| || |||||||||||||||||||| |||||||| ||
fh09938 1342 GATAAGCACCATTTGGCTGATCTAAGCCATCTTATTCGCCATGAAGCGCC 1391
D K H H L A D L S H L I R H E A P
1401 ----+----*----+----*----+----*----+----*----+----* 1450
Y L F Q K Y I K E S H G R D V R V
mfj02086 842 ATATTTGTTCCAGAAATACATTAAAGAGTCTCATGGAAGGGATGTACGAG 891
||| |||||||||| || ||||||||||||||||| |||||||||| |
fh09938 1392 ATACCTGTTCCAGAAGTATGTTAAAGAGTCTCATGGACGGGATGTACGTG 1441
Y L F Q K Y V K E S H G R D V R V
1451 ----+----*----+----*----+----*----+----*----+----* 1500
I V V G G R V V G T M L R C S T
mfj02086 892 TCATTGTTGTGGGAGGTCGTGTAGTTGGCACCATGCTACGCTGTTCCACA 941
||||||| |||||||| ||||| |||||||||||| |||| ||||| |||
fh09938 1442 TCATTGTCGTGGGAGGCCGTGTGGTTGGCACCATGTTACGTTGTTCAACA 1491
I V V G G R V V G T M L R C S T
1501 ----+----*----+----*----+----*----+----*----+----* 1550
D G R M Q S N C S L G G V G M M C
mfj02086 942 GATGGAAGGATGCAAAGCAACTGTTCCCTAGGCGGCGTGGGGATGATGTG 991
||||| || |||||||||||||| || |||| || ||||||||||||||
fh09938 1492 GATGGGAGAATGCAAAGCAACTGCTCATTAGGTGGTGTGGGGATGATGTG 1541
D G R M Q S N C S L G G V G M M C
1551 ----+----*----+----*----+----*----+----*----+----* 1600
S L S E Q G K Q L A I Q V S N I L
mfj02086 992 CTCACTGAGTGAACAAGGAAAGCAGCTGGCTATCCAAGTGTCTAATATCC 1041
|||| ||||||||||||| |||||||| |||||||| |||||||||||||
fh09938 1542 CTCATTGAGTGAACAAGGGAAGCAGCTAGCTATCCAGGTGTCTAATATCC 1591
S L S E Q G K Q L A I Q V S N I L
1601 ----+----*----+----*----+----*----+----*----+----* 1650
G T D V C G I D L L M K D D G S
mfj02086 1042 TGGGGACGGATGTGTGTGGCATTGACCTGTTGATGAAAGATGACGGCTCC 1091
|||||| |||||||||||||||||||||| ||||||||||||||||||||
fh09938 1592 TGGGGATGGATGTGTGTGGCATTGACCTGCTGATGAAAGATGACGGCTCC 1641
G M D V C G I D L L M K D D G S
1651 ----+----*----+----*----+----*----+----*----+----* 1700
F C V C E A N A N V G F I A F D K
mfj02086 1092 TTCTGTGTCTGCGAGGCCAATGCAAATGTAGGTTTCATCGCCTTTGATAA 1141
||||| ||||| ||||||||||||||||||||||||||||||||||||||
fh09938 1642 TTCTGCGTCTGTGAGGCCAATGCAAATGTAGGTTTCATCGCCTTTGATAA 1691
F C V C E A N A N V G F I A F D K
1701 ----+----*----+----*----+----*----+----*----+----* 1750
A C N L D V A G I I A D Y A A S L
mfj02086 1142 GGCTTGTAATCTAGATGTAGCTGGTATCATAGCAGACTATGCTGCCTCCC 1191
|||||||||||||||||||||||||||||||||||||||||| |||||||
fh09938 1692 GGCTTGTAATCTAGATGTAGCTGGTATCATAGCAGACTATGCCGCCTCCC 1741
A C N L D V A G I I A D Y A A S L
1751 ----+----*----+----*----+----*----+----*----+----* 1800
L P A G R L T R R M S L L S V V
mfj02086 1192 TTCTGCCCGCTGGCCGGCTCACCCGGCGCATGTCCCTGCTCTCTGTGGTG 1241
|||| ||| ||||||||||||||||||| |||||||||||||| ||||||
fh09938 1742 TTCTACCCTCTGGCCGGCTCACCCGGCGTATGTCCCTGCTCTCCGTGGTG 1791
L P S G R L T R R M S L L S V V
1801 ----+----*----+----*----+----*----+----*----+----* 1850
S T A S E T S E P E L G P P A S A
mfj02086 1242 TCCACTGCCAGTGAGACTAGTGAGCCGGAGCTTGGTCCCCCTGCCAGCGC 1291
|||||||||||||||||||||||||||||||| |||||||| |||||| |
fh09938 1792 TCCACTGCCAGTGAGACTAGTGAGCCGGAGCTGGGTCCCCCAGCCAGCAC 1841
S T A S E T S E P E L G P P A S T
1851 ----+----*----+----*----+----*----+----*----+----* 1900
A V D N M S A S S S S V D S D P E
mfj02086 1292 TGCTGTCGACAACATGAGCGCGAGTTCCAGCTCTGTTGATAGCGACCCTG 1341
|||||| ||||||||||| || ||||||||||||||||| ||||||||||
fh09938 1842 TGCTGTTGACAACATGAGTGCAAGTTCCAGCTCTGTTGACAGCGACCCTG 1891
A V D N M S A S S S S V D S D P E
1901 ----+----*----+----*----+----*----+----*----+----* 1950
S T E R E M L T K L P G G L F
mfj02086 1342 AAAGCACCACCGAGCGAGAGATGCTCACCAAGCTCCCAGGGGGGCTGTTC 1391
|||| ||| ||||||||| |||||||||||||||||||||| ||||||
fh09938 1892 AAAG...CACGGAGCGAGAGCTGCTCACCAAGCTCCCAGGGGGCCTGTTC 1938
S T E R E L L T K L P G G L F
1951 ----+----*----+----*----+----*----+----*----+----* 2000
N M N Q L L A N E I K L L V E *
mfj02086 1392 AACATGAACCAGCTGCTAGCCAATGAAATCAAACTCCTGGTGGAGTGACT 1441
||||||||||||||||||||||||||||||||||| |||||||| |||||
fh09938 1939 AACATGAACCAGCTGCTAGCCAATGAAATCAAACTACTGGTGGACTGACT 1988
N M N Q L L A N E I K L L V D *
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mfj02086 1442 CCACTGGTAAATAGTTAAACAACAAAACCCTTGTAAAACTGTCTCCCTGC 1491
|||||||||| |||| ||||||||||||||||||||| ||| ||
fh09938 1989 CCACTGGTAA....TTAACCAACAAAACCCTTGTAAAACTTTCTTTCT.. 2032
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mfj02086 1492 ACCCCACACCTTCCCTTTAACCAACTTGCAATGCTGTTCATGGAGAATGT 1541
| | | | ||||||||||||||||||||||||||| |||
fh09938 2033 ..TCTTTTCTATTTTTAAAACCAACTTGCAATGCTGTTCATGGAGGATGC 2080
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mfj02086 1542 TCAGAAGGTTGAGTTACAGATACAGTAAGATTGGTTAGA.AGAAAGGAAA 1590
|||| | | |||| | | | |||| |||| ||| || ||| || |
fh09938 2081 TCAGGAAGATGAG..AGAAAATTAGTAGGATTAGTTGGAGAGAGTGGGAG 2128
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mfj02086 1591 ATAGATGAGGCCCCTGGTAGTGA.........TTCATTTATGGATTTCAC 1631
||||||||| || ||| |||| | |||||||| || ||
fh09938 2129 ATAGATGAGACCTCTGCTAGTAAGATGTTACTTTCATTTACAAATCCTAC 2178
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mfj02086 1632 ......AGAGGAATACTAGGTGACACAGAGAGAAATGGCAGGCTCTCATG 1675
||||| | | |||||| | ||| ||||| |||||||||||
fh09938 2179 AAATAGAGAGGCAGAATAGGTGGGGTATAGAAAAATGTCAGGCTCTCATA 2228
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mfj02086 1676 GTAACCTTTTCAGTTACGTATGAAA..ACCCTGCTCATAGGCCATGAGAA 1723
|| ||| ||| | | || ||| ||||||||||||||||| |
fh09938 2229 GTTACCCTTTTAAATTGCTAAAAAATGTGTATGCTCATAGGCCATGAGGA 2278
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mfj02086 1724 CGTGAAAGGTTTTTTTTTTTTTTTCTCCCCATGGTCTCTTGCTTTTGTTT 1773
| | |||||||||| ||||||| |||||||||||||
fh09938 2279 ACAAATACTTTTTTTTTTT..........CATGGTCCCTTGCTTTTGTTT 2318
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mfj02086 1774 TT.....ATGTAGAATGGTTTTGATCCAAGTA.CTTAGTAGCATGACTTC 1817
|| | | |||||||||| | ||| || | |||||||| |||||
fh09938 2319 TTGTACAAAAAAAAATGGTTTTGCTACAAATATCCAAGTAGCATAACTTC 2368
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mfj02086 1818 A......GTTTCAAGATTTGT....AAAGAGGAAAACATCCATTTACAAT 1857
| ||| ||||||||| | |||||||||||| ||| | |
fh09938 2369 ACATTGTGTTGGAAGATTTGTCATCAGTGAGGAAAACATCTGCTTAAATT 2418
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mfj02086 1858 ACAGAAGTGTTTTAAATA.....ATCTGAAATGTCTGCTGTTTC..TCTC 1900
|||| | | ||| | || ||||||| ||||| |||| | |
fh09938 2419 ACAGGAATTTTTGTATTATACAGCTCTGAAAATTCTGCCATTTCCTTATT 2468
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mfj02086 1901 AGCTAGCATTTAGCGCATAGTTGTTTATGAACTCTAAGGGG...CTCTGA 1947
| |||||| | | | || ||||||||| ||| ||| || | |
fh09938 2469 AACTAGCAGCTTTAG.TTTGTAGTTTATGAAATCTTGAGGGGCTCTTTTA 2517
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mfj02086 1948 CTGGAATTTCTTTATTTTCATGTTTGTCTTTGTTTTTTCCCCTTAATTTG 1997
|||| ||||||| ||| ||||||||||||| | | ||
fh09938 2518 CTGGGATTTCTTATTTT...........TTTGTTTTTTCCCGCTTAATTT 2556
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mfj02086 1998 GGTGGGAGGGTAATGTGACTATAATCCAATAAA.GATTTTTAATTACAAA 2046
||||||||| || ||| ||||| |||||||| | || ||||| |||||
fh09938 2557 GGTGGGAGGTCAAATTGAATATAACCCAATAAAGGCTTCTTAATGACAAA 2606
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mfj02086 2047 ATTGGCATGTTTGCATGATGAAAGGGAAATGAACAGTATTGCAATGTCTG 2096
||||||||||||||||||||||| |||||||||||||||||||||||| |
fh09938 2607 ATTGGCATGTTTGCATGATGAAATGGAAATGAACAGTATTGCAATGTCCG 2656
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mfj02086 2097 GTATACAAAGTAACATTTACTCAATGTAGATAAAGTTATACTAGTTAAAA 2146
||||||||| ||||||| | |||||||||||||| ||| ||||||| |||
fh09938 2657 GTATACAAAATAACATTAATTCAATGTAGATAAAATTACACTAGTTTAAA 2706
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mfj02086 2147 GTTTGTGCATTGACTTGTATTTGTTAGTGTTTTAGTCTTTTTTTGAAGGA 2196
| |||||||| ||||||||||||||||||||||||||||||| |||
fh09938 2707 ATATGTGCATTCACTTGTATTTGTTAGTGTTTTAGTCTTTTTTGAAAG.. 2754
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mfj02086 2197 TATATGCTCTGTTAATGTTGC...........ATTTTTAATACATGCTGG 2235
|| ||||||||||||||||| ||||||||||||||| |
fh09938 2755 .ATGTGCTCTGTTAATGTTGCTTTTTTTTTTTTTTTTTAATACATGCTAG 2803
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mfj02086 2236 TAACAC...CCTTGTTCTATGACTGCATCTTTAACAATGGCCAAAGTAAA 2282
| || | || |||||| ||||||||||||||||||||||||| ||
fh09938 2804 TCTAACATTTCCTGCTCTATGCCTGCATCTTTAACAATGGCCAAAGTGAA 2853
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mfj02086 2283 CAATATGCTAC..TTTTGGTTAACAAGACAC.CACTCAAAACATACACAT 2329
|| ||||||| |||| ||||||||||||| ||| |||||| ||||
fh09938 2854 GAAAATGCTACCTTTTTTGTTAACAAGACACTGACTTGAAACATGTACAT 2903
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mfj02086 2330 TTAAAAGTCTCCCTGCCTTCCTCTTTTTCT............CATTTAAA 2367
||||| | | |||| |||| | ||||||||
fh09938 2904 TTAAAGCCTTTTATTTTTTCCCTTTTTGTTTTGGTAGTTGGGCATTTAAA 2953
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mfj02086 2368 GGATATAAAAGACAAGTCAAT............................. 2388
| || || || | |
fh09938 2954 TAAGGACAAGGAAAAATATTTTTGGGGGCAAATCAAGAGCCTATGAGTTC 3003
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mfj02086 2389 ....................TTCTTAATGCTAACTTTCTGTGTTGGCATT 2418
|| ||||| | | || | | || |||||
fh09938 3004 TAAGTATAAAGCTGAAGTGATTTCGAATGCCAGCGTTATATATTTGCATT 3053
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mfj02086 2419 TTTCACATTTTAGAAAGGAGTATATATGT...........CGCATGCAAG 2457
|||||||||||| | ||||||||| ||| |||||||| |
fh09938 3054 TTTCACATTTTACGAGGGAGTATATGTGTATGTGTGTGCACGCATGCATG 3103
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mfj02086 2458 TGTACATGTTTTATTCTTTGTTTACACCAA......ACAGAATAGATTCT 2501
|||| |||||| | ||||||| || ||| | | | | | | |
fh09938 3104 TGTATGTGTTTTGCTTTTTGTTTCCATCAACTAATCAAAAAGGATAATTT 3153
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mfj02086 2502 AGTGAATG..GCATGATGGGAAGCAGTTTTTTT...........ACTGAT 2538
|| |||| |||||||||||| ||| ||||| || |||
fh09938 3154 AGAAAATGGAGCATGATGGGAAACAGAGTTTTTGACTTTAAAAAACAGAT 3203
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mfj02086 2539 GAATTGCCT.......TAGACCTCGATAGTATAGAGTTTCTCCCCTAAAG 2581
|| ||| | ||||| | | | ||||| | || ||| ||
fh09938 3204 GAGTTGTTTTCATAAGTAGACTCCACTGGGGTAGAGGTATTCACCTTAAA 3253
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mfj02086 2582 ACAACAGGAAAGTAAATG.TTCCTTAAGCTTTTTTGTG...........T 2619
||| || |||| ||| || ||| || |||||||| |
fh09938 3254 ACATAGGGTGAGTAGATGCTTTTTTAGGCCTTTTTGTGTATATGTACGTT 3303
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mfj02086 2620 GTTTGTATGTATGTTTGTTTTTGTAGACTGCTTGGTGTATGATTTATTCA 2669
|||||| | | | || | ||| ||| ||| | ||||| ||||||||
fh09938 3304 GTTTGTTTTTTTCCTTTTGTTTCTAGCCTGTTCAGTGTACAGTTTATTCA 3353
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mfj02086 2670 AGGCTACAGGCTTTTATTTAATG.TTATGGCTGTGCATTT..TCTTTATG 2716
|||||||| |||||| ||||||| || ||||| ||||||| ||||| |
fh09938 3354 AGGCTACATGCTTTTCTTTAATGCTTCTGGCTATGCATTTTCTCTTTTTA 3403
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mfj02086 2717 CTTAAAAGATCTGG..AGGGAGGTGGGGTGGATGTTTTTGGGGGGAGATT 2764
| || | ||| ||| || |||||| |||||||||||| || || |
fh09938 3404 CATATAGGATTTGGGATTGGGGGTGGGTTGGATGTTTTTGTTTGGGGACT 3453
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mfj02086 2765 TATTTA..AGTATTGAGTCTCATATAGCCCCACACCTAAGCCTTCATTCA 2812
|||||| ||||||||||||| |||||||| || | |||||| ||||
fh09938 3454 TATTTAGTAGTATTGAGTCTCTTATAGCCCTACTCTTAAGCC....TTCA 3499
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mfj02086 2813 GTACTGACCACTCTGTTTCTTTTTT........GAATTGATGAAAG.CCC 2853
||||| ||||||| | | || || ||||| || |||| |||
fh09938 3500 ATACTGTCCACTCTTTATATTCCTTTACTTGCAGAATTTATAAAAGCCCC 3549
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mfj02086 2854 CAAACTGCATATAATATGAGCCTTTAAGTCAAGGAATAAAACAAT.CTAG 2902
||||||||||||||||||||||||||| || || ||| ||| | |
fh09938 3550 CAAACTGCATATAATATGAGCCTTTAAAACATGGGTAAAACTAATCCCAT 3599
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mfj02086 2903 TGATGAGTCTGGAAGATGTGTTAAGAAGTGGAGATGCTTCAGGGGTCAAC 2952
||||| || |||| | | ||||||||| |||||||||| ||| | ||||
fh09938 3600 TGATGGGTTTGGATGGTATGTTAAGAAATGGAGATGCTGCAGAGCCCAAC 3649
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mfj02086 2953 ATAATTTTT......................................... 2961
||||||||
fh09938 3650 GTAATTTTTTAAACAGCAAGTTTTCCATCTCCCTACGAATCCTCTGAAGC 3699
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mfj02086 2962 ......CCCTAAGCTTTTCTGCTTCTCCAGTGCTGTTTTTCTTCAGATGG 3005
|| |||| ||| ||||||||||| |||| ||||||||||
fh09938 3700 TTTTACCCAAGCCCTTTCTTGCCTCTCCAGTGCTATTTTCCTTCAGATGG 3749
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mfj02086 3006 A.CTTTAACCTAATTTCTTGGACACTACTTCAAGGAGACTTCAAGGCAAT 3054
| ||| ||| ||||||||||||||||||| | |||||||| |||||||
fh09938 3750 ACCTTAAACATAATTTCTTGGACACTACT..AGAGAGACTTCGAGGCAAT 3797
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mfj02086 3055 AATAAAACATCAGCATTAACCA.CTCTAACAGAGGTCTGATCATGCTTAA 3103
||||||| ||||| |||||||| || |||||||||| ||||||||||||
fh09938 3798 AATAAAAGATCAGTATTAACCAGCTATAACAGAGGTTTGATCATGCTTAC 3847
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mfj02086 3104 TTGTATAG...TTCTCCCATTTAAAAAAGGAATGTAATAAAACTTGCTTT 3150
||||| || ||| ||| ||| ||||||||||||||||||| ||| |||
fh09938 3848 TTGTACAGTTTTTCCCCCGTTTTAAAAAGGAATGTAATAAAATTTG.TTT 3896
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mfj02086 3151 CCCCCATAGAATTA...AGTATTAAAGCGGAGCGAAAGGTT..TCATTGA 3195
||||||||||| | ||||||| ||| |||||||| | ||||
fh09938 3897 TTTCCATAGAATTAAATAATATTAAAATTGAGTGAAAGGTTGATTGTTGA 3946
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mfj02086 3196 CAACTAGAATAGTACCTGTAACCGGTGCACTCTTCTCAACTCACCTCA.. 3243
| ||||||||||||| | | | ||||| | ||||| ||||||||
fh09938 3947 TGAATAGAATAGTACCTCTCATCTGTGCAGT.GTCTCATTTCACCTCAGA 3995
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mfj02086 3244 .......AGACTCACAAGGAGTCTAT......CTTTAGGGCACTTTAATT 3280
| || | |||||| | | ||||| | | |||||
fh09938 3996 GAAAAGGATACATAAGAGGAGTTTGTAATTTATCTTAGGATATTCTAATT 4045
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mfj02086 3281 GCATCTGCACGTTCTGAT.TTGCACAGGATTATTTGGAGTC......... 3320
|||| | | | || || |||| |||| | | | || | |
fh09938 4046 GCATTTAAAAGAACTTATCTTGCGCAGGGTAAATGGGGGACTCACATACA 4095
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mfj02086 3321 ...ATACGTACCTCTGCTTCACTAACAGAATAAAAGTACTTGGTAC.... 3363
|| |||||||| ||| |||||||| | || ||||||||||
fh09938 4096 TATATTAATACCTCTGACTCATTAACAGAA.AGAAATACTTGGTACTTCT 4144
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mfj02086 3364 TTTGCTCAATGATCATATTTTGCAGGGTGCATGGTATTTGGTATAGACAA 3413
|| ||| ||||| |||| | || ||| ||||| ||||||||||||| ||
fh09938 4145 TTCGCTGAATGACCATACTGTGGAGGATGCATACTATTTGGTATAGAGAA 4194
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mfj02086 3414 ATAAATG.......AACAACCGTGGAATCAGATCCT.............. 3442
||||||| || ||| | ||| | || |
fh09938 4195 ATAAATGAGGAAGAAAGAACTGCTTAATTAAATTATCATTCATATGTTCA 4244
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mfj02086 3443 ....AAGACCATCTGGTTGCCACTTACATTATGATATACA.......... 3478
||||||||||||||||| | ||||||| | | |
fh09938 4245 TATAGAGACCATCTGGTTGCCATGTGTATTATGACACATACACTTTGAAT 4294
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mfj02086 3479 .................................TGTATGTAAGTTCATGC 3495
||| || | | | ||
fh09938 4295 AGTTACATATCACAAGTATGTAGTTCATGTTTGTGTTGGTGGGGTAAGGC 4344
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mfj02086 3496 ATTTGAAAACAAATAG.....AACATCTTCACTTGTTGAAAAATTCACTT 3540
|| | ||| | ||| |||| |||| | ||| | |
fh09938 4345 ATCAGGAAAAATGTAGTTAGTCTTTTCTTAACTTATACCAAATTAACCAA 4394
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mfj02086 3541 TTTTATGGTGGGATAATAAAGAAACAGGAAAATTAGTTTTTTTAATGCAA 3590
| ||| | ||| | |||| | ||||| ||| ||
fh09938 4395 CTATATTATAGGAAATATGTGAAATTAGTTCATTAGCTTTATT....... 4437
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mfj02086 3591 GCATTGCTCTAAGATGCTTTCCCAGCAGTTTCACTCCTGGTCACACAGCC 3640
| ||| |||| ||| || | || | | | | ||||
fh09938 4438 ......CACTATTATGCATTCACATGATATTAAAACGTACACTCACA... 4478
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mfj02086 3641 ACTGTGTTGAAGTGCAGCTCTCATCAGCCACCCTCGGGTGCCACACTCAC 3690
|||| | || | || || | | | | | | |
fh09938 4479 ....TGTTAGAATGAAAAGAGCAGTAGTTATCTTAGATTTTAAAA..... 4519
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mfj02086 3691 ACGCAGACTGTAAGTAGGGAAGGTGCTCATCTTAAATTCTCTCAA.ATTA 3739
| || || |||| ||||| |||| |||
fh09938 4520 .................ACATGGATATCTTCTTGAATTCCTTCAAGATTG 4552
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mfj02086 3740 AGGTAAACAATAAGAACAGATCATTCTGGAAGAAC....TCAAAACAAGT 3785
||||| | ||||||| || ||||||||||||| || ||||||
fh09938 4553 AGGTAGAGAATAAGAGCAAATCATTCTGGAAGTACCTTAAGGAAACAAAC 4602
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mfj02086 3786 GAGAGTTGACTTTTA........................TTCATAACTTT 3811
|| || |||| || ||||||||
fh09938 4603 AGCAGCAGATATTTAGGTTAAACTTATTTTCATAATTGTTTAATAACTTT 4652
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mfj02086 3812 TATATAGTCTTCATTACTACTGTGACAAA......ATGTATCAAATTTGT 3855
| |||| |||||||| ||| | ||| | | || |||||||| |||
fh09938 4653 TGTATAATCTTCATTGCTATTATGAGAGAGAATGTATATATCAAATATGT 4702
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mfj02086 3856 GTAATCGTGCCAAATATCTGAATTACTGTAAATTTTTTGTACACTGTTAA 3905
||||| | || |||||||| |||||| |||||||| | ||||||
fh09938 4703 GTAATGAT....AAAATCTGAAT...TGTAAAATTTTTGTATATTGTTAA 4745
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mfj02086 3906 AATTGTAATTGTTAATTGTATTTTAA.......TGATTCTGATTTTGTTT 3948
|||||||||| | |||||||||| || | ||||||| ||||||
fh09938 4746 AATTGTAATTCTAAATTGTATTTCAAAAATGATTATTTCTGATATTGTTT 4795
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mfj02086 3949 TTATGTTACTTATGATGAGAGTTGAAC.TCATAGATCCATGCAT.....T 3992
|||||| || ||||||| | || || | ||| ||| | ||| |
fh09938 4796 TTATGTCACCCATGATGAAAACTGGACTTTATATATCTAAACATACAAGT 4845
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mfj02086 3993 ATGAACTATGCCACTTAAACTTTCTAATTGAG.................. 4024
||||||||| | | ||||| ||| |||| |
fh09938 4846 ATGAACTATTCTATTTAAAATTTTTAATAGTTTTTTTCTTTTTTGGTGCC 4895
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mfj02086 4025 .................................................. 4025
fh09938 4896 TATAATTGATTGGTCATTTCTGCTGGCTTTTCTCCAATGAACATTGAAAT 4945
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mfj02086 4025 .................................................. 4025
fh09938 4946 CTTCCTGTATATGTTACCAATAAGAAAACTACCCTGGAACAGTAGAAAAA 4995
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mfj02086 4025 .................................................. 4025
fh09938 4996 CCCAACAAGAGACTTGGCATTCATCAAGCACATTATCAGACTTTGAGAAC 5045
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mfj02086 4025 .................................................. 4025
fh09938 5046 ATATTGAAGGCATTGACTTTGAAAATCATCTCTTTTTCTCAAGAAGAAAG 5095
5201 ----+----*----+----*----+----*----+----*----+----* 5250
mfj02086 4025 .................................................. 4025
fh09938 5096 CAATGGAGAAGCAAATTTGTTTCATTCAGTGAATCCCCAGTTTGGGGCTT 5145
5251 ----+----*----+----*----+----*----+----*----+----* 5300
mfj02086 4025 .................................................. 4025
fh09938 5146 GTGGGGCTTAGAGACATTGTGAAATCAAATCTTGTGTTATACTTTTCTCC 5195
5301 ----+----*----+----*----+----*----+----*----+----* 5350
mfj02086 4025 .................................................. 4025
fh09938 5196 TGGCTCACTTTTTTTGAGAAGGTTTATGGGCTATTTGGCTGGTGAGACAC 5245
5351 ----+----*----+----*----+----*----+----*----+----* 5400
mfj02086 4025 .................................................. 4025
fh09938 5246 GATCCCCTCCTAAGAAAATGTAGGTGCTCAGACAGGTAACCACTGCTGCT 5295
5401 ----+----*----+----*----+----*----+----*----+----* 5450
mfj02086 4025 .................................................. 4025
fh09938 5296 ACTGTTTTTATTTGTTTGTTTGTTCAATTTTATTTAAGATTTGTTTTTGT 5345
5451 ----+----*----+----*----+----*----+----*----+--- 5498
mfj02086 4025 ................................................ 4025
fh09938 5346 TGTACTAGGATTTTAAAAAATGTAATATATTGCAGGATTTATAACCAG 5393