# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj01541.fasta.nr -Q ../query/mKIAA1904.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1904, 485 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919451 sequences Expectation_n fit: rho(ln(x))= 6.0557+/-0.000189; mu= 8.0887+/- 0.011 mean_var=95.6949+/-18.553, 0's: 42 Z-trim: 48 B-trim: 35 in 1/64 Lambda= 0.131108 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|81884330|sp|Q68FM6.1|LRFN6_MOUSE RecName: Full= ( 823) 3206 616.6 7.5e-174 gi|26327779|dbj|BAC27630.1| unnamed protein produc ( 823) 3197 614.9 2.4e-173 gi|109480979|ref|XP_235476.4| PREDICTED: similar t ( 820) 3080 592.8 1.1e-166 gi|109094093|ref|XP_001086834.1| PREDICTED: simila ( 820) 3026 582.6 1.3e-163 gi|74755895|sp|Q5R3F8.1|LRFN6_HUMAN RecName: Full= ( 820) 3016 580.7 4.9e-163 gi|149065982|gb|EDM15855.1| rCG59981 [Rattus norve ( 881) 3015 580.5 5.9e-163 gi|109482544|ref|XP_001076087.1| PREDICTED: simila ( 874) 3014 580.3 6.7e-163 gi|168270768|dbj|BAG10177.1| leucine-rich repeat-c ( 820) 3005 578.6 2.1e-162 gi|149743265|ref|XP_001500931.1| PREDICTED: extrac ( 818) 2997 577.1 5.9e-162 gi|73969742|ref|XP_538390.2| PREDICTED: similar to ( 773) 2958 569.7 9.4e-160 gi|76678139|ref|XP_606988.2| PREDICTED: similar to ( 824) 2937 565.8 1.6e-158 gi|149430133|ref|XP_001521392.1| PREDICTED: simila ( 908) 1755 342.2 3.4e-91 gi|126339854|ref|XP_001376428.1| PREDICTED: simila ( 630) 1333 262.3 2.7e-67 gi|224095262|ref|XP_002199071.1| PREDICTED: extrac ( 801) 1237 244.2 9.5e-62 gi|118082838|ref|XP_425479.2| PREDICTED: similar t ( 801) 1227 242.3 3.5e-61 gi|189441828|gb|AAI67639.1| LOC100170580 protein [ ( 806) 809 163.2 2.2e-37 gi|47218932|emb|CAF98130.1| unnamed protein produc ( 875) 765 154.9 7.7e-35 gi|126334420|ref|XP_001378994.1| PREDICTED: hypoth ( 801) 695 141.7 6.9e-31 gi|189514457|ref|XP_001920383.1| PREDICTED: zinc f ( 814) 683 139.4 3.4e-30 gi|50755507|ref|XP_414771.1| PREDICTED: hypothetic ( 796) 670 136.9 1.8e-29 gi|149035024|gb|EDL89744.1| rCG42720, isoform CRA_ ( 829) 665 136.0 3.6e-29 gi|81914137|sp|Q8C8T7.1|ELFN1_MOUSE RecName: Full= ( 828) 653 133.7 1.8e-28 gi|57087803|ref|XP_547014.1| PREDICTED: similar to ( 824) 652 133.5 2e-28 gi|109065836|ref|XP_001085829.1| PREDICTED: simila ( 828) 632 129.8 2.8e-27 gi|191252816|ref|NP_001122108.1| extracellular leu ( 828) 625 128.4 6.9e-27 gi|189517183|ref|XP_001337163.2| PREDICTED: simila ( 874) 593 122.4 4.8e-25 gi|26336140|dbj|BAC31755.1| unnamed protein produc ( 292) 553 114.5 3.8e-23 gi|189535079|ref|XP_001922657.1| PREDICTED: sc:d03 ( 892) 542 112.8 3.9e-22 gi|114611966|ref|XP_001137798.1| PREDICTED: simila ( 737) 529 110.2 1.8e-21 gi|47217301|emb|CAG12509.1| unnamed protein produc ( 940) 515 107.7 1.4e-20 gi|189517274|ref|XP_001919039.1| PREDICTED: hypoth ( 797) 512 107.1 1.8e-20 gi|224070706|ref|XP_002186681.1| PREDICTED: simila ( 513) 507 106.0 2.5e-20 gi|47214912|emb|CAG04106.1| unnamed protein produc ( 649) 508 106.2 2.6e-20 gi|47207302|emb|CAF96439.1| unnamed protein produc ( 768) 449 95.1 6.8e-17 gi|194678741|ref|XP_876191.3| PREDICTED: similar t ( 786) 441 93.6 2e-16 gi|206557838|sp|P0C7U0.1|ELFN1_HUMAN RecName: Full ( 806) 430 91.5 8.6e-16 gi|149409210|ref|XP_001513634.1| PREDICTED: simila ( 900) 320 70.8 1.7e-09 gi|220672780|emb|CAX14840.1| novel protein similar ( 403) 234 54.3 7.1e-05 gi|157676773|emb|CAP08021.1| unnamed protein produ ( 403) 234 54.3 7.1e-05 >>gi|81884330|sp|Q68FM6.1|LRFN6_MOUSE RecName: Full=Leuc (823 aa) initn: 3206 init1: 3206 opt: 3206 Z-score: 3277.5 bits: 616.6 E(): 7.5e-174 Smith-Waterman score: 3206; 100.000% identity (100.000% similar) in 485 aa overlap (1-485:339-823) 10 20 30 mKIAA1 LKNKKEIVTLDKLRAHTEYTFCVTSLRNSR :::::::::::::::::::::::::::::: gi|818 ATLVVIIPHPYSKMYVLVQYNNSYFSDVMTLKNKKEIVTLDKLRAHTEYTFCVTSLRNSR 310 320 330 340 350 360 40 50 60 70 80 90 mKIAA1 RFNHTCLTFTTRDLVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 RFNHTCLTFTTRDLVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK 370 380 390 400 410 420 100 110 120 130 140 150 mKIAA1 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVARMSSIPSMVGEKLPASKGLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVARMSSIPSMVGEKLPASKGLE 430 440 450 460 470 480 160 170 180 190 200 210 mKIAA1 AGLDTPKVATKGNYIEVRTGAAGDSLARPEEELPEIENGQGSAAEISTIAKEVDKVNQII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 AGLDTPKVATKGNYIEVRTGAAGDSLARPEEELPEIENGQGSAAEISTIAKEVDKVNQII 490 500 510 520 530 540 220 230 240 250 260 270 mKIAA1 NNCIDALKLDSASFLGGGGGGGGGGDSDLAFECQSLPAAPAASSAATPGALERPSFLSPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 NNCIDALKLDSASFLGGGGGGGGGGDSDLAFECQSLPAAPAASSAATPGALERPSFLSPP 550 560 570 580 590 600 280 290 300 310 320 330 mKIAA1 YKESSHHPLQRQLSADAAVSRKTCSVSSSGSIKSAKVFSLDVPDHPTPTGLAKSDSKYIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 YKESSHHPLQRQLSADAAVSRKTCSVSSSGSIKSAKVFSLDVPDHPTPTGLAKSDSKYIE 610 620 630 640 650 660 340 350 360 370 380 390 mKIAA1 KGSPLNSPLDRLPLVPTGSSGSSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 KGSPLNSPLDRLPLVPTGSSGSSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS 670 680 690 700 710 720 400 410 420 430 440 450 mKIAA1 QRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 QRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVY 730 740 750 760 770 780 460 470 480 mKIAA1 MAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL ::::::::::::::::::::::::::::::::::: gi|818 MAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL 790 800 810 820 >>gi|26327779|dbj|BAC27630.1| unnamed protein product [M (823 aa) initn: 3197 init1: 3197 opt: 3197 Z-score: 3268.3 bits: 614.9 E(): 2.4e-173 Smith-Waterman score: 3197; 99.794% identity (99.794% similar) in 485 aa overlap (1-485:339-823) 10 20 30 mKIAA1 LKNKKEIVTLDKLRAHTEYTFCVTSLRNSR :::::::::::::::::::::::::::::: gi|263 ATLVVIIPHPYSKMYVLVQYNNSYFSDVMTLKNKKEIVTLDKLRAHTEYTFCVTSLRNSR 310 320 330 340 350 360 40 50 60 70 80 90 mKIAA1 RFNHTCLTFTTRDLVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RFNHTCLTFTTRDLVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK 370 380 390 400 410 420 100 110 120 130 140 150 mKIAA1 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVARMSSIPSMVGEKLPASKGLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVARMSSIPSMVGEKLPASKGLE 430 440 450 460 470 480 160 170 180 190 200 210 mKIAA1 AGLDTPKVATKGNYIEVRTGAAGDSLARPEEELPEIENGQGSAAEISTIAKEVDKVNQII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 AGLDTPKVATKGNYIEVRTGAAGDSLARPEEELPEIENGQGSAAEISTIAKEVDKVNQII 490 500 510 520 530 540 220 230 240 250 260 270 mKIAA1 NNCIDALKLDSASFLGGGGGGGGGGDSDLAFECQSLPAAPAASSAATPGALERPSFLSPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 NNCIDALKLDSASFLGGGGGGGGGGDSDLAFECQSLPAAPAASSAATPGALERPSFLSPP 550 560 570 580 590 600 280 290 300 310 320 330 mKIAA1 YKESSHHPLQRQLSADAAVSRKTCSVSSSGSIKSAKVFSLDVPDHPTPTGLAKSDSKYIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 YKESSHHPLQRQLSADAAVSRKTCSVSSSGSIKSAKVFSLDVPDHPTPTGLAKSDSKYIE 610 620 630 640 650 660 340 350 360 370 380 390 mKIAA1 KGSPLNSPLDRLPLVPTGSSGSSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KGSPLNSPLDRLPLVPTGSSGSSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS 670 680 690 700 710 720 400 410 420 430 440 450 mKIAA1 QRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVY :::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: gi|263 QRVSFLKPLTRSKRDSTYSQPSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVY 730 740 750 760 770 780 460 470 480 mKIAA1 MAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL ::::::::::::::::::::::::::::::::::: gi|263 MAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL 790 800 810 820 >>gi|109480979|ref|XP_235476.4| PREDICTED: similar to sl (820 aa) initn: 1693 init1: 1693 opt: 3080 Z-score: 3148.7 bits: 592.8 E(): 1.1e-166 Smith-Waterman score: 3080; 96.694% identity (98.554% similar) in 484 aa overlap (1-484:339-819) 10 20 30 mKIAA1 LKNKKEIVTLDKLRAHTEYTFCVTSLRNSR :::::::::::::::::::::::::::::: gi|109 ATLVVIIPHPYSKMYVLVQYNNSYFSDVMTLKNKKEIVTLDKLRAHTEYTFCVTSLRNSR 310 320 330 340 350 360 40 50 60 70 80 90 mKIAA1 RFNHTCLTFTTRDLVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK :::::::::::::::::: .:::::::::::::::::::::::::::::::::::::::. gi|109 RFNHTCLTFTTRDLVPGDQVPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEQ 370 380 390 400 410 420 100 110 120 130 140 150 mKIAA1 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVARMSSIPSMVGEKLPASKGLE ::::::::::::::::::::::::::::::: ::::::::::::::::.::::::::::: gi|109 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLVEPPVLPVARMSSIPSMIGEKLPASKGLE 430 440 450 460 470 480 160 170 180 190 200 210 mKIAA1 AGLDTPKVATKGNYIEVRTGAAGDSLARPEEELPEIENGQGSAAEISTIAKEVDKVNQII ::::::::::::::::::::::::::::::..:::::::::::::::::::::::::::: gi|109 AGLDTPKVATKGNYIEVRTGAAGDSLARPEDDLPEIENGQGSAAEISTIAKEVDKVNQII 490 500 510 520 530 540 220 230 240 250 260 270 mKIAA1 NNCIDALKLDSASFLGGGGGGGGGGDSDLAFECQSLPAAPAASSAATPGALERPSFLSPP ::::::::::::::::::.:: ::::::::::::::: ::::.::::::::::::::: gi|109 NNCIDALKLDSASFLGGGSGG---GDSDLAFECQSLPAATAASSTATPGALERPSFLSPP 550 560 570 580 590 600 280 290 300 310 320 330 mKIAA1 YKESSHHPLQRQLSADAAVSRKTCSVSSSGSIKSAKVFSLDVPDHPTPTGLAKSDSKYIE :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|109 YKESSHHPLQRQLSADAAVTRKTCSVSSSGSIKSAKVFSLDVPDHPTPTGLAKSDSKYIE 610 620 630 640 650 660 340 350 360 370 380 390 mKIAA1 KGSPLNSPLDRLPLVPTGSSGSSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KGSPLNSPLDRLPLVPTGSSGSSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS 670 680 690 700 710 720 400 410 420 430 440 450 mKIAA1 QRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|109 QRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEAY 730 740 750 760 770 780 460 470 480 mKIAA1 MAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL ::::::::::::::::: :::::::::::::::: gi|109 MAAGHALRKKVQFAKDEVLHDILDYWKGVSAQQKX 790 800 810 820 >>gi|109094093|ref|XP_001086834.1| PREDICTED: similar to (820 aa) initn: 1649 init1: 1649 opt: 3026 Z-score: 3093.5 bits: 582.6 E(): 1.3e-163 Smith-Waterman score: 3026; 94.021% identity (98.557% similar) in 485 aa overlap (1-485:339-820) 10 20 30 mKIAA1 LKNKKEIVTLDKLRAHTEYTFCVTSLRNSR :::::::::::::::::::::::::::::: gi|109 ATLVVIIPHPYSKMYVLVQYNNSYFSDVMTLKNKKEIVTLDKLRAHTEYTFCVTSLRNSR 310 320 330 340 350 360 40 50 60 70 80 90 mKIAA1 RFNHTCLTFTTRDLVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|109 RFNHTCLTFTTRDPVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK 370 380 390 400 410 420 100 110 120 130 140 150 mKIAA1 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVARMSSIPSMVGEKLPASKGLE :::::::::::::::::::::::::::::::::::::::.::.:::::.::::::.:::: gi|109 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVSRMASIPSMIGEKLPAAKGLE 430 440 450 460 470 480 160 170 180 190 200 210 mKIAA1 AGLDTPKVATKGNYIEVRTGAAGDSLARPEEELPEIENGQGSAAEISTIAKEVDKVNQII :::::::::::::::::::::.::.:::::..::..:::::::::::::::::::::::: gi|109 AGLDTPKVATKGNYIEVRTGAGGDGLARPEDDLPDLENGQGSAAEISTIAKEVDKVNQII 490 500 510 520 530 540 220 230 240 250 260 270 mKIAA1 NNCIDALKLDSASFLGGGGGGGGGGDSDLAFECQSLPAAPAASSAATPGALERPSFLSPP ::::::::::::::::::.:. :: .::::::::::: :::::..::::::::::::: gi|109 NNCIDALKLDSASFLGGGSGS---GDPELAFECQSLPAAAAASSATAPGALERPSFLSPP 550 560 570 580 590 600 280 290 300 310 320 330 mKIAA1 YKESSHHPLQRQLSADAAVSRKTCSVSSSGSIKSAKVFSLDVPDHPTPTGLAKSDSKYIE :::::::::::::::::::.::::::::::::::::::::::::::. :::::.:::::: gi|109 YKESSHHPLQRQLSADAAVTRKTCSVSSSGSIKSAKVFSLDVPDHPAATGLAKGDSKYIE 610 620 630 640 650 660 340 350 360 370 380 390 mKIAA1 KGSPLNSPLDRLPLVPTGSSGSSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS ::::::::::::::::.::.:.:::::::::::::::::::::::::::::::::::::: gi|109 KGSPLNSPLDRLPLVPAGSGGGSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS 670 680 690 700 710 720 400 410 420 430 440 450 mKIAA1 QRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVY ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|109 QRVSFLKPLTRSKRDSAYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVY 730 740 750 760 770 780 460 470 480 mKIAA1 MAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL ::::::::::::::::::::::::::::::::::: gi|109 MAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL 790 800 810 820 >>gi|74755895|sp|Q5R3F8.1|LRFN6_HUMAN RecName: Full=Leuc (820 aa) initn: 1644 init1: 1644 opt: 3016 Z-score: 3083.3 bits: 580.7 E(): 4.9e-163 Smith-Waterman score: 3016; 93.814% identity (98.351% similar) in 485 aa overlap (1-485:339-820) 10 20 30 mKIAA1 LKNKKEIVTLDKLRAHTEYTFCVTSLRNSR :::::::::::::::::::::::::::::: gi|747 ATLVVIIPHPYSKMYILVQYNNSYFSDVMTLKNKKEIVTLDKLRAHTEYTFCVTSLRNSR 310 320 330 340 350 360 40 50 60 70 80 90 mKIAA1 RFNHTCLTFTTRDLVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|747 RFNHTCLTFTTRDPVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK 370 380 390 400 410 420 100 110 120 130 140 150 mKIAA1 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVARMSSIPSMVGEKLPASKGLE :::::::::::::::::::::::::::::::::::::::.::.:::::.:::::..:::: gi|747 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVSRMASIPSMIGEKLPTAKGLE 430 440 450 460 470 480 160 170 180 190 200 210 mKIAA1 AGLDTPKVATKGNYIEVRTGAAGDSLARPEEELPEIENGQGSAAEISTIAKEVDKVNQII :::::::::::::::::::::.::.:::::..::..:::::::::::::::::::::::: gi|747 AGLDTPKVATKGNYIEVRTGAGGDGLARPEDDLPDLENGQGSAAEISTIAKEVDKVNQII 490 500 510 520 530 540 220 230 240 250 260 270 mKIAA1 NNCIDALKLDSASFLGGGGGGGGGGDSDLAFECQSLPAAPAASSAATPGALERPSFLSPP ::::::::::::::::::... :: .::::::::::: :::::. ::::::::::::: gi|747 NNCIDALKLDSASFLGGGSSS---GDPELAFECQSLPAAAAASSATGPGALERPSFLSPP 550 560 570 580 590 600 280 290 300 310 320 330 mKIAA1 YKESSHHPLQRQLSADAAVSRKTCSVSSSGSIKSAKVFSLDVPDHPTPTGLAKSDSKYIE :::::::::::::::::::.::::::::::::::::::::::::::. :::::.:::::: gi|747 YKESSHHPLQRQLSADAAVTRKTCSVSSSGSIKSAKVFSLDVPDHPAATGLAKGDSKYIE 610 620 630 640 650 660 340 350 360 370 380 390 mKIAA1 KGSPLNSPLDRLPLVPTGSSGSSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS ::::::::::::::::.::.:.:::::::::::::::::::::::::::::::::::::: gi|747 KGSPLNSPLDRLPLVPAGSGGGSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS 670 680 690 700 710 720 400 410 420 430 440 450 mKIAA1 QRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 QRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVY 730 740 750 760 770 780 460 470 480 mKIAA1 MAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL ::::::::::::::::::::::::::::::::::: gi|747 MAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL 790 800 810 820 >>gi|149065982|gb|EDM15855.1| rCG59981 [Rattus norvegicu (881 aa) initn: 1625 init1: 1625 opt: 3015 Z-score: 3081.8 bits: 580.5 E(): 5.9e-163 Smith-Waterman score: 3015; 95.833% identity (97.917% similar) in 480 aa overlap (1-480:339-815) 10 20 30 mKIAA1 LKNKKEIVTLDKLRAHTEYTFCVTSLRNSR :::::::::::::::::::::::::::::: gi|149 ATLVVIIPHPYSKMYVLVQYNNSYFSDVMTLKNKKEIVTLDKLRAHTEYTFCVTSLRNSR 310 320 330 340 350 360 40 50 60 70 80 90 mKIAA1 RFNHTCLTFTTRDLVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK :::::::::::::::::: .:::::::::::::::::::::::::::::::::::::::. gi|149 RFNHTCLTFTTRDLVPGDQVPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEQ 370 380 390 400 410 420 100 110 120 130 140 150 mKIAA1 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVARMSSIPSMVGEKLPASKGLE ::::::::::::::::::::::::::::::: ::::::::::::::::.::::::::::: gi|149 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLVEPPVLPVARMSSIPSMIGEKLPASKGLE 430 440 450 460 470 480 160 170 180 190 200 210 mKIAA1 AGLDTPKVATKGNYIEVRTGAAGDSLARPEEELPEIENGQGSAAEISTIAKEVDKVNQII ::::::::::::::::::::::::::::::..:::::::::::::::::::::::::::: gi|149 AGLDTPKVATKGNYIEVRTGAAGDSLARPEDDLPEIENGQGSAAEISTIAKEVDKVNQII 490 500 510 520 530 540 220 230 240 250 260 270 mKIAA1 NNCIDALKLDSASFLGGGGGGGGGGDSDLAFECQSLPAAPAASSAATPGALERPSFLSPP ::::::::::::::::::.::: :::::::::::::: ::::.::::::::::::::: gi|149 NNCIDALKLDSASFLGGGSGGG---DSDLAFECQSLPAATAASSTATPGALERPSFLSPP 550 560 570 580 590 600 280 290 300 310 320 330 mKIAA1 YKESSHHPLQRQLSADAAVSRKTCSVSSSGSIKSAKVFSLDVPDHPTPTGLAKSDSKYIE :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|149 YKESSHHPLQRQLSADAAVTRKTCSVSSSGSIKSAKVFSLDVPDHPTPTGLAKSDSKYIE 610 620 630 640 650 660 340 350 360 370 380 390 mKIAA1 KGSPLNSPLDRLPLVPTGSSGSSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KGSPLNSPLDRLPLVPTGSSGSSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS 670 680 690 700 710 720 400 410 420 430 440 450 mKIAA1 QRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|149 QRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEAY 730 740 750 760 770 780 460 470 480 mKIAA1 MAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL ::::::::::::::::::::::: :.: gi|149 MAAGHALRKKVQFAKDEDLHDILITEGGLSPAEAXXXXXXXGRGIWGKGPPNRVAGRRGT 790 800 810 820 830 840 >>gi|109482544|ref|XP_001076087.1| PREDICTED: similar to (874 aa) initn: 1625 init1: 1625 opt: 3014 Z-score: 3080.9 bits: 580.3 E(): 6.7e-163 Smith-Waterman score: 3014; 95.445% identity (97.516% similar) in 483 aa overlap (1-483:339-817) 10 20 30 mKIAA1 LKNKKEIVTLDKLRAHTEYTFCVTSLRNSR :::::::::::::::::::::::::::::: gi|109 ATLVVIIPHPYSKMYVLVQYNNSYFSDVMTLKNKKEIVTLDKLRAHTEYTFCVTSLRNSR 310 320 330 340 350 360 40 50 60 70 80 90 mKIAA1 RFNHTCLTFTTRDLVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK :::::::::::::::::: .:::::::::::::::::::::::::::::::::::::::. gi|109 RFNHTCLTFTTRDLVPGDQVPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEQ 370 380 390 400 410 420 100 110 120 130 140 150 mKIAA1 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVARMSSIPSMVGEKLPASKGLE ::::::::::::::::::::::::::::::: ::::::::::::::::.::::::::::: gi|109 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLVEPPVLPVARMSSIPSMIGEKLPASKGLE 430 440 450 460 470 480 160 170 180 190 200 210 mKIAA1 AGLDTPKVATKGNYIEVRTGAAGDSLARPEEELPEIENGQGSAAEISTIAKEVDKVNQII ::::::::::::::::::::::::::::::..:::::::::::::::::::::::::::: gi|109 AGLDTPKVATKGNYIEVRTGAAGDSLARPEDDLPEIENGQGSAAEISTIAKEVDKVNQII 490 500 510 520 530 540 220 230 240 250 260 270 mKIAA1 NNCIDALKLDSASFLGGGGGGGGGGDSDLAFECQSLPAAPAASSAATPGALERPSFLSPP ::::::::::::::::::.: :::::::::::::::: ::::.::::::::::::::: gi|109 NNCIDALKLDSASFLGGGSG---GGDSDLAFECQSLPAATAASSTATPGALERPSFLSPP 550 560 570 580 590 600 280 290 300 310 320 330 mKIAA1 YKESSHHPLQRQLSADAAVSRKTCSVSSSGSIKSAKVFSLDVPDHPTPTGLAKSDSKYIE :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|109 YKESSHHPLQRQLSADAAVTRKTCSVSSSGSIKSAKVFSLDVPDHPTPTGLAKSDSKYIE 610 620 630 640 650 660 340 350 360 370 380 390 mKIAA1 KGSPLNSPLDRLPLVPTGSSGSSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KGSPLNSPLDRLPLVPTGSSGSSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS 670 680 690 700 710 720 400 410 420 430 440 450 mKIAA1 QRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|109 QRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEAY 730 740 750 760 770 780 460 470 480 mKIAA1 MAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL ::::::::::::::::::::::: .:: : gi|109 MAAGHALRKKVQFAKDEDLHDIL-ITEGVHEWQNCREADGGFLAMMGIGDLVSFGLSKKT 790 800 810 820 830 840 gi|109 GNGALHGAACPQGHGGLAPGLSPAELGSGP 850 860 870 >>gi|168270768|dbj|BAG10177.1| leucine-rich repeat-conta (820 aa) initn: 1633 init1: 1633 opt: 3005 Z-score: 3072.0 bits: 578.6 E(): 2.1e-162 Smith-Waterman score: 3005; 93.608% identity (98.144% similar) in 485 aa overlap (1-485:339-820) 10 20 30 mKIAA1 LKNKKEIVTLDKLRAHTEYTFCVTSLRNSR :::::::::::::::::::::::::::::: gi|168 ATLVVIIPHPYSKMYILVQYNNSYFSDVMTLKNKKEIVTLDKLRAHTEYTFCVTSLRNSR 310 320 330 340 350 360 40 50 60 70 80 90 mKIAA1 RFNHTCLTFTTRDLVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|168 RFNHTCLTFTTRDPVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK 370 380 390 400 410 420 100 110 120 130 140 150 mKIAA1 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVARMSSIPSMVGEKLPASKGLE :::::::::::::::::::::::::::::::::::::::.::.:::::.:::::..:::: gi|168 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVSRMASIPSMIGEKLPTAKGLE 430 440 450 460 470 480 160 170 180 190 200 210 mKIAA1 AGLDTPKVATKGNYIEVRTGAAGDSLARPEEELPEIENGQGSAAEISTIAKEVDKVNQII :::::::::::::::::::::.::.:::::..::..:::::::::::::::::::::::: gi|168 AGLDTPKVATKGNYIEVRTGAGGDGLARPEDDLPDLENGQGSAAEISTIAKEVDKVNQII 490 500 510 520 530 540 220 230 240 250 260 270 mKIAA1 NNCIDALKLDSASFLGGGGGGGGGGDSDLAFECQSLPAAPAASSAATPGALERPSFLSPP ::::::::::::::::::... :: .::::::::::: :::::. :::::::::::: gi|168 NNCIDALKLDSASFLGGGSSS---GDPELAFECQSLPAAAAASSATGPGALERPSFLSPS 550 560 570 580 590 600 280 290 300 310 320 330 mKIAA1 YKESSHHPLQRQLSADAAVSRKTCSVSSSGSIKSAKVFSLDVPDHPTPTGLAKSDSKYIE :::::::::::::::::::.::::::::::::::::::::::::::. :::::.:::::: gi|168 YKESSHHPLQRQLSADAAVTRKTCSVSSSGSIKSAKVFSLDVPDHPAATGLAKGDSKYIE 610 620 630 640 650 660 340 350 360 370 380 390 mKIAA1 KGSPLNSPLDRLPLVPTGSSGSSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS ::::::::::::::::.::.:.:::::::::::::::::::::::::::::::::::::: gi|168 KGSPLNSPLDRLPLVPAGSGGGSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS 670 680 690 700 710 720 400 410 420 430 440 450 mKIAA1 QRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 QRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVY 730 740 750 760 770 780 460 470 480 mKIAA1 MAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL ::::::::::::::::::::::::::::::::::: gi|168 MAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL 790 800 810 820 >>gi|149743265|ref|XP_001500931.1| PREDICTED: extracellu (818 aa) initn: 2333 init1: 1432 opt: 2997 Z-score: 3063.9 bits: 577.1 E(): 5.9e-162 Smith-Waterman score: 2997; 93.402% identity (97.938% similar) in 485 aa overlap (1-485:339-818) 10 20 30 mKIAA1 LKNKKEIVTLDKLRAHTEYTFCVTSLRNSR :::::::::::::::::::::::::::::: gi|149 ATLVVIIPHPYSKMYVLVQYNNSYFSDVMTLKNKKEIVTLDKLRAHTEYTFCVTSLRNSR 310 320 330 340 350 360 40 50 60 70 80 90 mKIAA1 RFNHTCLTFTTRDLVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|149 RFNHTCLTFTTRDPVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK 370 380 390 400 410 420 100 110 120 130 140 150 mKIAA1 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVARMSSIPSMVGEKLPASKGLE ::::.:::::::.::::::::::.:::::::::::::::.::::::::.:::::.::::: gi|149 QKSVKVKKTILELRYGADVDAGSVVHAAQKLGEPPVLPVSRMSSIPSMIGEKLPTSKGLE 430 440 450 460 470 480 160 170 180 190 200 210 mKIAA1 AGLDTPKVATKGNYIEVRTGAAGDSLARPEEELPEIENGQGSAAEISTIAKEVDKVNQII :::::::::::::::::::::.::.:::::..::..:::::::::::::::::::::::: gi|149 AGLDTPKVATKGNYIEVRTGAGGDGLARPEDDLPDLENGQGSAAEISTIAKEVDKVNQII 490 500 510 520 530 540 220 230 240 250 260 270 mKIAA1 NNCIDALKLDSASFLGGGGGGGGGGDSDLAFECQSLPAAPAASSAATPGALERPSFLSPP ::::::::::::::::::.:: :: .::::::::::: ::::::.::::::::::::: gi|149 NNCIDALKLDSASFLGGGSGG---GDPELAFECQSLPAAAAASSAAAPGALERPSFLSPP 550 560 570 580 590 600 280 290 300 310 320 330 mKIAA1 YKESSHHPLQRQLSADAAVSRKTCSVSSSGSIKSAKVFSLDVPDHPTPTGLAKSDSKYIE :::::::::::::::::::.::::::::::::::::::::::::::. .::::.:::::: gi|149 YKESSHHPLQRQLSADAAVARKTCSVSSSGSIKSAKVFSLDVPDHPATAGLAKGDSKYIE 610 620 630 640 650 660 340 350 360 370 380 390 mKIAA1 KGSPLNSPLDRLPLVPTGSSGSSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADSLS ::::::::::::::::.:.:: :::::.::::::::::::::::::::::::::::::: gi|149 KGSPLNSPLDRLPLVPAGGSG--GGGGGVHHLEVKPAYHCSEHRHSFPALYYEEGADSLS 670 680 690 700 710 720 400 410 420 430 440 450 mKIAA1 QRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREEVY :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|149 QRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHAREEVY 730 740 750 760 770 780 460 470 480 mKIAA1 MAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL ::::::::::::::::::::::::::::::::::: gi|149 MAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL 790 800 810 >>gi|73969742|ref|XP_538390.2| PREDICTED: similar to Pla (773 aa) initn: 1457 init1: 1427 opt: 2958 Z-score: 3024.4 bits: 569.7 E(): 9.4e-160 Smith-Waterman score: 2958; 92.608% identity (96.715% similar) in 487 aa overlap (1-485:295-773) 10 20 30 mKIAA1 LKNKKEIVTLDKLRAHTEYTFCVTSLRNSR :::::::::::::::::::::::::::::: gi|739 ATLVVIIPHPYSKMYVLVQYNNSYFSDVMTLKNKKEIVTLDKLRAHTEYTFCVTSLRNSR 270 280 290 300 310 320 40 50 60 70 80 90 mKIAA1 RFNHTCLTFTTRDLVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|739 RFNHTCLTFTTRDPVPGDLAPSTSTTTHYIMTILGCLFGMVIVLGAVYYCLRKRRMQEEK 330 340 350 360 370 380 100 110 120 130 140 150 mKIAA1 QKSVNVKKTILEMRYGADVDAGSIVHAAQKLGEPPVLPVARMSSIPSMVGEKLPASKGLE ::::.::::::::::::::::::.:::::::::::::::. :::::::.:::::.::::: gi|739 QKSVKVKKTILEMRYGADVDAGSVVHAAQKLGEPPVLPVSCMSSIPSMIGEKLPTSKGLE 390 400 410 420 430 440 160 170 180 190 200 210 mKIAA1 AGLDTPKVATKGNYIEVRTGAAGDSLARPEEELPEIENGQGSAAEISTIAKEVDKVNQII :::::::::::::::::::::.::.:::::..::..:::::::::::::::::::::::: gi|739 AGLDTPKVATKGNYIEVRTGAGGDGLARPEDDLPDLENGQGSAAEISTIAKEVDKVNQII 450 460 470 480 490 500 220 230 240 250 260 mKIAA1 NNCIDALKLDSASFLGGGGGGGGGGDSDLAFECQSLPAAPAAS--SAATPGALERPSFLS ::::::::::::::::::::. :: .::::::::::: ::. ::: ::::::::::: gi|739 NNCIDALKLDSASFLGGGGGS---GDPELAFECQSLPAAAAAAAASAAPPGALERPSFLS 510 520 530 540 550 560 270 280 290 300 310 320 mKIAA1 PPYKESSHHPLQRQLSADAAVSRKTCSVSSSGSIKSAKVFSLDVPDHPTPTGLAKSDSKY :::::::::::::::::::::.::::::::::::::::::::::::::. .::::.:::: gi|739 PPYKESSHHPLQRQLSADAAVARKTCSVSSSGSIKSAKVFSLDVPDHPAAAGLAKGDSKY 570 580 590 600 610 620 330 340 350 360 370 380 mKIAA1 IEKGSPLNSPLDRLPLVPTGSSGSSGGGGGIHHLEVKPAYHCSEHRHSFPALYYEEGADS ::::::::::::::::::.:: :::::::::::::.:::::::::::::::::::: gi|739 IEKGSPLNSPLDRLPLVPAGS-----GGGGIHHLEVKPAFHCSEHRHSFPALYYEEGADS 630 640 650 660 670 390 400 410 420 430 440 mKIAA1 LSQRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LSQRVSFLKPLTRSKRDSTYSQLSPRHYYSGYSSSPEYSSESTHKIWERFRPYKKHHREE 680 690 700 710 720 730 450 460 470 480 mKIAA1 VYMAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL ::::::::::::::::::::::::::::::::::::: gi|739 VYMAAGHALRKKVQFAKDEDLHDILDYWKGVSAQQKL 740 750 760 770 485 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 08:58:32 2009 done: Mon Mar 16 09:05:41 2009 Total Scan time: 961.370 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]