# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj01453.fasta.nr -Q ../query/mKIAA0227.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0227, 271 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7915957 sequences Expectation_n fit: rho(ln(x))= 5.4763+/-0.000196; mu= 8.9839+/- 0.011 mean_var=106.8452+/-20.572, 0's: 42 Z-trim: 51 B-trim: 108 in 1/65 Lambda= 0.124079 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|22137664|gb|AAH28891.1| Ttc9 protein [Mus muscu ( 259) 1726 318.8 5.8e-85 gi|148670774|gb|EDL02721.1| mCG7933, isoform CRA_b ( 258) 1721 317.9 1.1e-84 gi|123795474|sp|Q3V038.1|TTC9A_MOUSE RecName: Full ( 219) 1455 270.3 2.1e-70 gi|109084166|ref|XP_001082201.1| PREDICTED: simila ( 440) 1302 243.2 5.9e-62 gi|28839621|gb|AAH47950.1| TTC9 protein [Homo sapi ( 277) 1298 242.3 7e-62 gi|119601449|gb|EAW81043.1| hCG20925, isoform CRA_ ( 222) 1278 238.6 7.2e-61 gi|152031717|sp|Q92623.2|TTC9A_HUMAN RecName: Full ( 222) 1267 236.6 2.8e-60 gi|187469053|gb|AAI66802.1| Ttc9 protein [Rattus n ( 249) 1227 229.5 4.4e-58 gi|74149597|dbj|BAE36425.1| unnamed protein produc ( 164) 1066 200.5 1.6e-49 gi|118091720|ref|XP_001231669.1| PREDICTED: simila ( 208) 948 179.5 4.2e-43 gi|197245591|gb|AAI68518.1| Unknown (protein for M ( 180) 857 163.1 3e-38 gi|68371654|ref|XP_689195.1| PREDICTED: similar to ( 217) 786 150.5 2.3e-34 gi|220678844|emb|CAX13703.1| novel protein similar ( 175) 784 150.0 2.6e-34 gi|47221312|emb|CAG13248.1| unnamed protein produc ( 182) 756 145.0 8.5e-33 gi|126329327|ref|XP_001371061.1| PREDICTED: hypoth ( 226) 747 143.5 3e-32 gi|149056508|gb|EDM07939.1| similar to hypothetica ( 239) 742 142.7 5.8e-32 gi|149557493|ref|XP_001520356.1| PREDICTED: hypoth ( 212) 736 141.5 1.1e-31 gi|26332871|dbj|BAC30153.1| unnamed protein produc ( 229) 731 140.7 2.2e-31 gi|73948330|ref|XP_541617.2| PREDICTED: hypothetic ( 235) 731 140.7 2.3e-31 gi|81905456|sp|Q9D6E4.1|TTC9B_MOUSE RecName: Full= ( 239) 731 140.7 2.3e-31 gi|148744921|gb|AAI42208.1| TTC9B protein [Bos tau ( 235) 723 139.3 6.1e-31 gi|90074984|dbj|BAE87172.1| unnamed protein produc ( 239) 723 139.3 6.1e-31 gi|74759948|sp|Q8N6N2.1|TTC9B_HUMAN RecName: Full= ( 239) 720 138.7 8.9e-31 gi|94734356|emb|CAK04202.1| novel protein similar ( 243) 674 130.5 2.7e-28 gi|111308980|gb|AAI21246.1| Tetratricopeptide repe ( 170) 666 128.9 5.7e-28 gi|73964259|ref|XP_547886.2| PREDICTED: similar to ( 221) 570 111.8 1e-22 gi|57100453|ref|XP_540903.1| PREDICTED: similar to ( 171) 542 106.7 2.8e-21 gi|224051249|ref|XP_002199311.1| PREDICTED: simila ( 356) 544 107.4 3.6e-21 gi|119594492|gb|EAW74086.1| tetratricopeptide repe ( 304) 541 106.8 4.6e-21 gi|148701430|gb|EDL33377.1| tetratricopeptide repe ( 171) 535 105.5 6.6e-21 gi|152112336|sp|A4IFF3.1|TTC9C_BOVIN RecName: Full ( 171) 533 105.1 8.5e-21 gi|119902200|ref|XP_001251776.1| PREDICTED: simila ( 171) 530 104.6 1.2e-20 gi|194218331|ref|XP_001916410.1| PREDICTED: simila ( 171) 528 104.2 1.6e-20 gi|81911277|sp|Q6P5P3.1|TTC9C_RAT RecName: Full=Te ( 171) 528 104.2 1.6e-20 gi|81912990|sp|Q810A3.1|TTC9C_MOUSE RecName: Full= ( 171) 526 103.8 2e-20 gi|74759911|sp|Q8N5M4.1|TTC9C_HUMAN RecName: Full= ( 171) 524 103.5 2.6e-20 gi|61820159|ref|XP_585522.1| PREDICTED: similar to ( 171) 518 102.4 5.4e-20 gi|12843142|dbj|BAB25875.1| unnamed protein produc ( 171) 517 102.2 6.2e-20 gi|126333613|ref|XP_001362456.1| PREDICTED: simila ( 171) 515 101.9 7.9e-20 gi|194215447|ref|XP_001916487.1| PREDICTED: simila ( 220) 463 92.7 5.9e-17 gi|152112337|sp|A4IHU6.1|TTC9C_XENTR RecName: Full ( 178) 456 91.3 1.2e-16 gi|210117968|gb|EEA65702.1| hypothetical protein B ( 175) 455 91.1 1.4e-16 gi|114638081|ref|XP_001156979.1| PREDICTED: tetrat ( 146) 451 90.3 2e-16 gi|109124805|ref|XP_001089917.1| PREDICTED: hypoth ( 219) 439 88.4 1.2e-15 gi|47225018|emb|CAF97433.1| unnamed protein produc ( 268) 439 88.5 1.3e-15 gi|209735350|gb|ACI68544.1| Tetratricopeptide repe ( 224) 436 87.9 1.7e-15 gi|29124589|gb|AAH49032.1| Zgc:56497 [Danio rerio] ( 217) 426 86.1 5.8e-15 gi|149524273|ref|XP_001514442.1| PREDICTED: simila ( 82) 405 81.8 4.1e-14 gi|149478512|ref|XP_001515418.1| PREDICTED: simila ( 60) 376 76.5 1.2e-12 gi|114677253|ref|XP_524267.2| PREDICTED: similar t ( 216) 328 68.5 1.1e-09 >>gi|22137664|gb|AAH28891.1| Ttc9 protein [Mus musculus] (259 aa) initn: 1726 init1: 1726 opt: 1726 Z-score: 1681.7 bits: 318.8 E(): 5.8e-85 Smith-Waterman score: 1726; 100.000% identity (100.000% similar) in 259 aa overlap (13-271:1-259) 10 20 30 40 50 60 mKIAA0 ELPRAAGEKDGSAGQARGAQGNGRGRVCGARSQRSALLKPGSRRALGAGGGRMERKGLAA :::::::::::::::::::::::::::::::::::::::::::::::: gi|221 AGQARGAQGNGRGRVCGARSQRSALLKPGSRRALGAGGGRMERKGLAA 10 20 30 40 70 80 90 100 110 120 mKIAA0 RSSGNPSPPALGEGPRPVPPPCVPSGGGAPERGQAGTAAEPAELIRRAHEFKSQGAQCYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 RSSGNPSPPALGEGPRPVPPPCVPSGGGAPERGQAGTAAEPAELIRRAHEFKSQGAQCYK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 DKKFREAIGKYHRALLELKGLLPSQEERDARPASSAGVPKSSRLSEEQSKTVEAIEIDCY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 DKKFREAIGKYHRALLELKGLLPSQEERDARPASSAGVPKSSRLSEEQSKTVEAIEIDCY 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 NSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 NSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEAR 170 180 190 200 210 220 250 260 270 mKIAA0 TRQPTDTNVIRYIQLTEMKLSRCSQREKEAM ::::::::::::::::::::::::::::::: gi|221 TRQPTDTNVIRYIQLTEMKLSRCSQREKEAM 230 240 250 >>gi|148670774|gb|EDL02721.1| mCG7933, isoform CRA_b [Mu (258 aa) initn: 1721 init1: 1721 opt: 1721 Z-score: 1676.8 bits: 317.9 E(): 1.1e-84 Smith-Waterman score: 1721; 100.000% identity (100.000% similar) in 258 aa overlap (14-271:1-258) 10 20 30 40 50 60 mKIAA0 ELPRAAGEKDGSAGQARGAQGNGRGRVCGARSQRSALLKPGSRRALGAGGGRMERKGLAA ::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GQARGAQGNGRGRVCGARSQRSALLKPGSRRALGAGGGRMERKGLAA 10 20 30 40 70 80 90 100 110 120 mKIAA0 RSSGNPSPPALGEGPRPVPPPCVPSGGGAPERGQAGTAAEPAELIRRAHEFKSQGAQCYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RSSGNPSPPALGEGPRPVPPPCVPSGGGAPERGQAGTAAEPAELIRRAHEFKSQGAQCYK 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 DKKFREAIGKYHRALLELKGLLPSQEERDARPASSAGVPKSSRLSEEQSKTVEAIEIDCY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DKKFREAIGKYHRALLELKGLLPSQEERDARPASSAGVPKSSRLSEEQSKTVEAIEIDCY 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 NSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEAR 170 180 190 200 210 220 250 260 270 mKIAA0 TRQPTDTNVIRYIQLTEMKLSRCSQREKEAM ::::::::::::::::::::::::::::::: gi|148 TRQPTDTNVIRYIQLTEMKLSRCSQREKEAM 230 240 250 >>gi|123795474|sp|Q3V038.1|TTC9A_MOUSE RecName: Full=Tet (219 aa) initn: 1455 init1: 1455 opt: 1455 Z-score: 1420.4 bits: 270.3 E(): 2.1e-70 Smith-Waterman score: 1455; 100.000% identity (100.000% similar) in 219 aa overlap (53-271:1-219) 30 40 50 60 70 80 mKIAA0 GRGRVCGARSQRSALLKPGSRRALGAGGGRMERKGLAARSSGNPSPPALGEGPRPVPPPC :::::::::::::::::::::::::::::: gi|123 MERKGLAARSSGNPSPPALGEGPRPVPPPC 10 20 30 90 100 110 120 130 140 mKIAA0 VPSGGGAPERGQAGTAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 VPSGGGAPERGQAGTAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLL 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA0 PSQEERDARPASSAGVPKSSRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 PSQEERDARPASSAGVPKSSRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYC 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA0 LKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTRQPTDTNVIRYIQLTEMKLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTRQPTDTNVIRYIQLTEMKLSR 160 170 180 190 200 210 270 mKIAA0 CSQREKEAM ::::::::: gi|123 CSQREKEAM >>gi|109084166|ref|XP_001082201.1| PREDICTED: similar to (440 aa) initn: 975 init1: 767 opt: 1302 Z-score: 1268.7 bits: 243.2 E(): 5.9e-62 Smith-Waterman score: 1379; 77.857% identity (87.500% similar) in 280 aa overlap (5-271:162-440) 10 20 30 mKIAA0 ELPRAAGEKDGSAGQARGAQGNGRGRVCGARSQR ..:: .::::. .: .:: ..: ::..: gi|109 ERAAWSGEAGEGRASEAAAAAAAAAGAASGSSGE-NGSAGRQTAAGCHGRHEACEARGRR 140 150 160 170 180 190 40 50 60 70 80 mKIAA0 SALLKPGSRRALGAG----------GGRMERKGLAARSSGNPSPPALGEGPRPVPPPCVP ::.:: : . :.: :::::::: :. ..::::::: ::: :: :: ::: gi|109 PRLLNPGRRGGGGGGQIAARTRRRGGGRMERKGSASGAKGNPSPPAAGEGQRPPPPLCVP 200 210 220 230 240 250 90 100 110 120 130 140 mKIAA0 SGGG-APERGQAGTAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLP .::: :: :::.:.:::::::::::::::::::::::::::::::::::::::::::::: gi|109 GGGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLP 260 270 280 290 300 310 150 160 170 180 190 200 mKIAA0 --SQEERDARPASSAGVPKSSRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEY ...:.:.: :: ::.:: .::::::::::::::::::::::::::::::::::::::: gi|109 PPGEREQDSRAASPAGAPKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEY 320 330 340 350 360 370 210 220 230 240 250 260 mKIAA0 CLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTRQPTDTNVIRYIQLTEMKLS ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|109 CLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLS 380 390 400 410 420 430 270 mKIAA0 RCSQREKEAM :::::::::: gi|109 RCSQREKEAM 440 >>gi|28839621|gb|AAH47950.1| TTC9 protein [Homo sapiens] (277 aa) initn: 971 init1: 759 opt: 1298 Z-score: 1267.2 bits: 242.3 E(): 7e-62 Smith-Waterman score: 1370; 78.339% identity (87.004% similar) in 277 aa overlap (9-271:1-277) 10 20 30 40 50 mKIAA0 ELPRAAGEKDGSAGQARGAQGNGRGRVCGARSQRSALLKPGSRRALGAGG---------- ..::::. .: .:: ..: ::..: ::.:: : . :.:: gi|288 ENGSAGRQTAAGCHGRHEACEARGRRPRLLNPGRRGGGGGGGQIAARTRRRG 10 20 30 40 50 60 70 80 90 100 mKIAA0 -GRMERKGLAARSSGNPSPPALGEGPRPVPPPCVPSGGG-APERGQAGTAAEPAELIRRA ::::::: :: ..::::::: ::: :: :: :::.::: :: :::.:.::::::::::: gi|288 GGRMERKGSAAGAKGNPSPPAAGEGQRPPPPLCVPGGGGGAPARGQVGAAAEPAELIRRA 60 70 80 90 100 110 110 120 130 140 150 160 mKIAA0 HEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLP--SQEERDARPASSAGVPKSSRLSE ::::::::::::::::::::::::::::::::::: ...:::.: :: ::. : .:::: gi|288 HEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERDSRAASPAGALKPGRLSE 120 130 140 150 160 170 170 180 190 200 210 220 mKIAA0 EQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|288 EQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHL 180 190 200 210 220 230 230 240 250 260 270 mKIAA0 GDYDKALYYLKEARTRQPTDTNVIRYIQLTEMKLSRCSQREKEAM :::::::::::::::.::::::::::::::::::::::::::::: gi|288 GDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQREKEAM 240 250 260 270 >>gi|119601449|gb|EAW81043.1| hCG20925, isoform CRA_a [H (222 aa) initn: 951 init1: 770 opt: 1278 Z-score: 1249.1 bits: 238.6 E(): 7.2e-61 Smith-Waterman score: 1278; 88.739% identity (94.144% similar) in 222 aa overlap (53-271:1-222) 30 40 50 60 70 80 mKIAA0 GRGRVCGARSQRSALLKPGSRRALGAGGGRMERKGLAARSSGNPSPPALGEGPRPVPPPC ::::: :: ..::::::: ::: :: :: : gi|119 MERKGSAAGAKGNPSPPAAGEGQRPPPPLC 10 20 30 90 100 110 120 130 140 mKIAA0 VPSGGG-APERGQAGTAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGL ::.::: :: :::.:.:::::::::::::::::::::::::::::::::::::::::::: gi|119 VPGGGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGL 40 50 60 70 80 90 150 160 170 180 190 mKIAA0 LP--SQEERDARPASSAGVPKSSRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVK :: ...:::.:::: ::. : .::::::::::::::::::::::::::::::::::::: gi|119 LPPPGERERDSRPASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVK 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA0 EYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTRQPTDTNVIRYIQLTEMK ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|119 EYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMK 160 170 180 190 200 210 260 270 mKIAA0 LSRCSQREKEAM :::::::::::: gi|119 LSRCSQREKEAM 220 >>gi|152031717|sp|Q92623.2|TTC9A_HUMAN RecName: Full=Tet (222 aa) initn: 940 init1: 759 opt: 1267 Z-score: 1238.4 bits: 236.6 E(): 2.8e-60 Smith-Waterman score: 1267; 88.288% identity (93.694% similar) in 222 aa overlap (53-271:1-222) 30 40 50 60 70 80 mKIAA0 GRGRVCGARSQRSALLKPGSRRALGAGGGRMERKGLAARSSGNPSPPALGEGPRPVPPPC ::::: :: ..::::::: ::: :: :: : gi|152 MERKGSAAGAKGNPSPPAAGEGQRPPPPLC 10 20 30 90 100 110 120 130 140 mKIAA0 VPSGGG-APERGQAGTAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGL ::.::: :: :::.:.:::::::::::::::::::::::::::::::::::::::::::: gi|152 VPGGGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGL 40 50 60 70 80 90 150 160 170 180 190 mKIAA0 LP--SQEERDARPASSAGVPKSSRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVK :: ...:::.: :: ::. : .::::::::::::::::::::::::::::::::::::: gi|152 LPPPGERERDSRAASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVK 100 110 120 130 140 150 200 210 220 230 240 250 mKIAA0 EYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTRQPTDTNVIRYIQLTEMK ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|152 EYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMK 160 170 180 190 200 210 260 270 mKIAA0 LSRCSQREKEAM :::::::::::: gi|152 LSRCSQREKEAM 220 >>gi|187469053|gb|AAI66802.1| Ttc9 protein [Rattus norve (249 aa) initn: 1263 init1: 625 opt: 1227 Z-score: 1199.1 bits: 229.5 E(): 4.4e-58 Smith-Waterman score: 1227; 84.163% identity (93.213% similar) in 221 aa overlap (53-271:1-216) 30 40 50 60 70 80 mKIAA0 GRGRVCGARSQRSALLKPGSRRALGAGGGRMERKGLAARSSGNPSPPALGEGPRPVPPPC :::::::::.::::::::::::::: :::: gi|187 MERKGLAARASGNPSPPALGEGPRPGPPPC 10 20 30 90 100 110 120 130 140 mKIAA0 VPSGGGAPERGQAGTAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLL ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|187 VPSGGGAPERGQAGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLL 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA0 P--SQEERDARPASSAGVPKSSRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKE : ...:::::::: ::.::.::::::::::::::::::::::::::::::::::::::: gi|187 PPPGERERDARPASPAGIPKASRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKE 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA0 YCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTRQPTDTNVIRYIQLTEMKL ::::::::::::::::::.:::::::::::::::::::::::::. .: ... .:. gi|187 YCLKVLKKEGENFKALYRAGVAFYHLGDYDKALYYLKEARTRQPS----VR-VRIHALKI 160 170 180 190 200 270 mKIAA0 SRCSQREKEAM : .. .:.. gi|187 IRRARWANEGLKKSSSSKPCGVHLQPQVPGEQRQEYHLTAGVPD 210 220 230 240 >>gi|74149597|dbj|BAE36425.1| unnamed protein product [M (164 aa) initn: 1066 init1: 1066 opt: 1066 Z-score: 1045.6 bits: 200.5 E(): 1.6e-49 Smith-Waterman score: 1066; 100.000% identity (100.000% similar) in 164 aa overlap (108-271:1-164) 80 90 100 110 120 130 mKIAA0 VPPPCVPSGGGAPERGQAGTAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLE :::::::::::::::::::::::::::::: gi|741 AHEFKSQGAQCYKDKKFREAIGKYHRALLE 10 20 30 140 150 160 170 180 190 mKIAA0 LKGLLPSQEERDARPASSAGVPKSSRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LKGLLPSQEERDARPASSAGVPKSSRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYER 40 50 60 70 80 90 200 210 220 230 240 250 mKIAA0 VKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTRQPTDTNVIRYIQLTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTRQPTDTNVIRYIQLTE 100 110 120 130 140 150 260 270 mKIAA0 MKLSRCSQREKEAM :::::::::::::: gi|741 MKLSRCSQREKEAM 160 >>gi|118091720|ref|XP_001231669.1| PREDICTED: similar to (208 aa) initn: 952 init1: 662 opt: 948 Z-score: 930.2 bits: 179.5 E(): 4.2e-43 Smith-Waterman score: 948; 74.163% identity (85.646% similar) in 209 aa overlap (65-271:5-208) 40 50 60 70 80 90 mKIAA0 SALLKPGSRRALGAGGGRMERKGLAARSSGNPSPPALGEGPRPVPPPCVPSGGGAPERGQ .:. :. : : . .::. : :. gi|118 MERASPAAGKLNAGGRGAGDGHGIAGGSQP-RAA 10 20 30 100 110 120 130 140 150 mKIAA0 AGTA--AEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLPSQEERDARP :..: :::.::: :: .:::.:::::::::::::::::::::::::.:: ::: :: gi|118 AAAAGGAEPGELIGRALDFKSEGAQCYKDKKFREAIGKYHRALLELKALLLSQEPGGQRP 40 50 60 70 80 90 160 170 180 190 200 210 mKIAA0 ASSAGVPKSSRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKEGEN :..: .. ::::: ..:::::.:::::::::::::::::::::::::::::.::::: gi|118 ANAA----AGGLSEEQRQAVEAIEVDCYNSLAACLLQAELVNYERVKEYCLKVLQKEGEN 100 110 120 130 140 220 230 240 250 260 270 mKIAA0 FKALYRSGVAFYHLGDYDKALYYLKEARTRQPTDTNVIRYIQLTEMKLSRCSQREKEAM :::::::::::::::::.::::::::::.:::::::::::::::::::::::::::::. gi|118 FKALYRSGVAFYHLGDYNKALYYLKEARSRQPTDTNVIRYIQLTEMKLSRCSQREKEAL 150 160 170 180 190 200 271 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 13:03:36 2009 done: Fri Mar 13 13:09:09 2009 Total Scan time: 773.770 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]