FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0528.ptfa, 993 aa vs ./tmplib.26680 library 1768024 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 5.5325+/-0.00465; mu= 13.6409+/- 0.312 mean_var=97.7212+/-23.494, 0's: 0 Z-trim: 11 B-trim: 109 in 1/35 Lambda= 0.1297 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4194 ( 320 res) mbg12940 ( 320) 177 44 4.8e-05 mKIAA0538 ( 826 res) msh37311 ( 826) 181 45 5.6e-05 mKIAA0559 ( 1592 res) mbg01260 (1592) 156 40 0.0023 mKIAA4186 ( 899 res) mfj00029 ( 899) 151 39 0.0029 mKIAA0080 ( 353 res) mbh01670 ( 353) 140 37 0.0062 >>mKIAA4194 ( 320 res) mbg12940 (320 aa) initn: 132 init1: 99 opt: 177 Z-score: 183.0 bits: 43.7 E(): 4.8e-05 Smith-Waterman score: 177; 38.298% identity (41.379% ungapped) in 94 aa overlap (6-94:186-277) 10 20 30 mKIAA0 AAVMPGKLKVKIVAGRHLPVMDRASDLTDAFVEVK ::: : :. ...: :: .. :.: .:... mKIAA4 EEWRDLQGGEKEEPEKLGDICTSLRYVPTAGKLTVCILEAKNLKKMD-VGGLSDPYVKIH 160 170 180 190 200 210 40 50 60 70 80 90 mKIAA0 F---GNTTF--KTDVYLKSLNPQWNSEWFKFEVDDEDLQDEPLQITVLDHDTYSANDAIG . :. :: : :.::: .: : :.::. :..: . .::::.: . :.::: mKIAA4 LMQNGKRLKKKKTTVKKKTLNPYFN-ESFSFEIPFEQIQKVQVVVTVLDYDKLGKNEAIG 220 230 240 250 260 270 100 110 120 130 140 150 mKIAA0 KVYIDIDPLLYSEAATVISGWFPIYDTIHGIRGEINVVVKVDLFNDSNRFRQSSCGVKFF :... mKIAA4 KIFVGSNATGTELRHWSDMLANPRRPIAQWHSLKPEEEVDALLGKNK 280 290 300 310 320 >>mKIAA0538 ( 826 res) msh37311 (826 aa) initn: 108 init1: 78 opt: 181 Z-score: 181.7 bits: 44.8 E(): 5.6e-05 Smith-Waterman score: 181; 34.211% identity (37.864% ungapped) in 114 aa overlap (3-112:150-256) 10 20 mKIAA0 AAVMPG----KLKVKIVAGRHLPVMDRASDLT :.:: .:. .. .: : :: . . mKIAA0 SHPKGFSGWTHLVEVDPNEEVQGEIHLRLEVVPGVHASRLRCAVLEARDLAPKDR-NGAS 120 130 140 150 160 170 30 40 50 60 70 80 mKIAA0 DAFVEVKFGNTTFKTDVYLKSLNPQWNSEWFKFEVDDEDLQDEPLQITVLDHDTYSANDA : ::.:.... : .:.: :: :.:: : : ::. : .: : . . : : : :: mKIAA0 DPFVRVHYNGRTQETSVVKKSCYPRWN-ETFDFEL--EKGASEALLVEAWDWDLVSQNDF 180 190 200 210 220 230 90 100 110 120 130 140 mKIAA0 IGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRGEINVVVKVDLFNDSNRFRQSSCGVK .::: .... : .. ::: mKIAA0 LGKVVVNVQRLCSAQQEE---GWFRLQPDQSKSRQGKGNLGSLQLEVRLRDETVLPSVCY 240 250 260 270 280 290 >>mKIAA0559 ( 1592 res) mbg01260 (1592 aa) initn: 177 init1: 144 opt: 156 Z-score: 152.7 bits: 40.4 E(): 0.0023 Smith-Waterman score: 160; 27.692% identity (32.143% ungapped) in 130 aa overlap (6-121:1364-1489) 10 20 30 mKIAA0 AAVMPGKLKVKIVAGRHLPVMDRASDLTDAFVEVK :.: ..:. .:.: : . .: ::.: mKIAA0 KHGGSKPTDVSKTASHPITGEIQLQINYDLGNLIIHILQARNLVPRDN-NGYSDPFVKVY 1340 1350 1360 1370 1380 1390 40 50 60 70 80 mKIAA0 F------------GNTTFK--TDVYLKSLNPQWNSEWFKFEVDDEDLQDEPLQITVLDHD . ... .: : :::::.::. . .. :.:. . :..:: :.: mKIAA0 LLPGRGQVMVVQNASVEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYD 1400 1410 1420 1430 1440 1450 90 100 110 120 130 140 mKIAA0 TYSANDAIGKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRGEINVVVKVDLFNDSNRFR .:.:: .:.: ::.. . . . :.:. . ..:. mKIAA0 RFSSNDFLGEVLIDLSSTSHLDNTPR---WYPLKEQTESIEHGKSHSSQNSQQSPKPSVI 1460 1470 1480 1490 1500 150 160 170 180 190 200 mKIAA0 QSSCGVKFFCTTSIPKCYRAVVIHGFVEELVVNEDPEYQWIDRIRTPRASNEARQRLISL mKIAA0 KSRSHGIFPDPSKDMQVPTIEKSHSSPGSSKSSSEGHLRSHGPSRSQSKTSVAQTHLEDA 1510 1520 1530 1540 1550 1560 >>mKIAA4186 ( 899 res) mfj00029 (899 aa) initn: 103 init1: 51 opt: 151 Z-score: 150.9 bits: 39.3 E(): 0.0029 Smith-Waterman score: 151; 28.099% identity (30.909% ungapped) in 121 aa overlap (4-120:315-428) 10 20 mKIAA0 AAVMP-GKLKVKIVAGRHLPVMDRASDL---TD .: : ..:... ...: : : .: mKIAA4 EDLIAAHLVLPNRVTVPVKKGLDVTNLRVPLPCGVIRVHLLEAKKLAQKDNFLGLGGKSD 290 300 310 320 330 340 30 40 50 60 70 80 mKIAA0 AFVEVKFGNTTFKTDVYLKSLNPQWNSEWFKFEVDDEDLQDEPLQITVLDHDTYSANDAI ...:..: .. . :.::: :: : :.: : . :: :.. . :.:: . .: . mKIAA4 PYAKVSIGLQHCRSRTIYKNLNPTWN-EVFEFMVYEVPGQD--LEVDLYDEDT-DKDDFL 350 360 370 380 390 400 90 100 110 120 130 140 mKIAA0 GKVYIDIDPLLYSEAATVISGWFPIYDTIHGIRGEINVVVKVDLFNDSNRFRQSSCGVKF :.. : . .. .. :.. :: . :: : mKIAA4 GSLQICLGDVMKNR---VVDEWFALNDTTSGRLHLRLEWLSLLTDQEALTENDSGLSTAI 410 420 430 440 450 150 160 170 180 190 200 mKIAA0 FCTTSIPKCYRAVVIHGFVEELVVNEDPEYQWIDRIRTPRASNEARQRLISLMSGELQRK mKIAA4 LVVFLENACNLPRNPFDYLNGEYRAKKLSRFVKNKASRDPSSYVKLTVGKKTFTSKTCPH 460 470 480 490 500 510 >>mKIAA0080 ( 353 res) mbh01670 (353 aa) initn: 104 init1: 104 opt: 140 Z-score: 145.0 bits: 36.8 E(): 0.0062 Smith-Waterman score: 140; 30.693% identity (32.979% ungapped) in 101 aa overlap (5-98:92-192) 10 20 30 mKIAA0 AAVMPGK-LKVKIVAGRHLPVMDRASDLTDAFVE : : : : : .. ::::: .. .: ... mKIAA0 TPGESKATSPSSPEEDVMLGSLTFSVDYNFPKKALVVTIQEAHGLPVMDDQTQGSDPYIK 70 80 90 100 110 120 40 50 60 70 80 90 mKIAA0 VKF---GNTTFKTDVYLKSLNPQWNSEWFKFEVDDEDLQDEPLQITVLDHDTYSANDAIG . . :: : :.:.: .. . . . .::: :.. ::. : .: .:.:: mKIAA0 MTILPDKRHRVKTRVLRKTLDPVFDETFTFYVIPYSQLQDLVLHFLVLSFDRFSRDDVIG 130 140 150 160 170 180 100 110 120 130 140 mKIAA0 KVYI---DIDPLLYSEAATVISGWFPIYDTIHGIRGEINVVVKVDLFNDSNRFRQSSCGV .:.. .:: mKIAA0 EVMVPLAGVDPSTGKVQLTRDIIKRNIQKCISRGELQVSLSYQPVAQRMTVVVLKARHLP 190 200 210 220 230 240 993 residues in 1 query sequences 1768024 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:22:19 2006 done: Mon Mar 27 10:22:20 2006 Scan time: 1.030 Display time: 0.110 Function used was FASTA [version 3.4t11 Apr 17, 2002]