# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj00945.fasta.nr -Q ../query/mKIAA0217.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0217, 749 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7914256 sequences Expectation_n fit: rho(ln(x))= 6.2581+/-0.000196; mu= 8.4153+/- 0.011 mean_var=112.7053+/-21.750, 0's: 26 Z-trim: 49 B-trim: 273 in 1/66 Lambda= 0.120810 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|134034151|sp|Q6A0A2.2|LARP5_MOUSE RecName: Full ( 741) 4916 868.1 0 gi|148700338|gb|EDL32285.1| La ribonucleoprotein d ( 743) 4902 865.6 0 gi|149055309|gb|EDM06963.1| La ribonucleoprotein d ( 738) 4735 836.5 0 gi|114629059|ref|XP_001137313.1| PREDICTED: La rib ( 759) 4334 766.6 0 gi|134034150|sp|Q92615.3|LARP5_HUMAN RecName: Full ( 738) 4322 764.5 0 gi|114629061|ref|XP_507619.2| PREDICTED: La ribonu ( 738) 4302 761.0 0 gi|119606937|gb|EAW86531.1| La ribonucleoprotein d ( 723) 4036 714.7 3.1e-203 gi|149743613|ref|XP_001501481.1| PREDICTED: simila ( 729) 3987 706.1 1.2e-200 gi|119905477|ref|XP_582060.3| PREDICTED: similar t ( 730) 3987 706.1 1.2e-200 gi|74197298|dbj|BAC31273.2| unnamed protein produc ( 594) 3758 666.2 1e-188 gi|118085598|ref|XP_418559.2| PREDICTED: hypotheti ( 726) 3683 653.1 1e-184 gi|224044683|ref|XP_002192967.1| PREDICTED: La rib ( 725) 3649 647.2 6.3e-183 gi|126341112|ref|XP_001365289.1| PREDICTED: hypoth ( 757) 3501 621.4 3.8e-175 gi|126341110|ref|XP_001365226.1| PREDICTED: hypoth ( 756) 3498 620.9 5.4e-175 gi|74141434|dbj|BAE35994.1| unnamed protein produc ( 504) 3332 591.8 2.1e-166 gi|189441629|gb|AAI67405.1| LOC100170485 protein [ ( 726) 3321 590.1 1e-165 gi|149634696|ref|XP_001509814.1| PREDICTED: hypoth ( 766) 2774 494.7 5.3e-137 gi|50924570|gb|AAH78640.1| Larp5 protein [Mus musc ( 657) 2747 490.0 1.2e-135 gi|149634698|ref|XP_001509848.1| PREDICTED: hypoth ( 766) 2747 490.0 1.4e-135 gi|73949202|ref|XP_535204.2| PREDICTED: similar to ( 881) 2151 386.2 2.9e-104 gi|116284239|gb|AAI24490.1| Zgc:153918 [Danio reri ( 723) 2140 384.2 9.4e-104 gi|115528662|gb|AAI24888.1| LOC100158356 protein [ ( 732) 1404 255.9 3.9e-65 gi|51477001|emb|CAH18446.1| hypothetical protein [ ( 244) 1392 253.5 7.3e-65 gi|120577542|gb|AAI30197.1| LOC100037046 protein [ ( 733) 1353 247.1 1.9e-62 gi|197246811|gb|AAI68832.1| Unknown (protein for M ( 734) 1350 246.5 2.7e-62 gi|60098509|emb|CAH65085.1| hypothetical protein [ ( 751) 1337 244.3 1.3e-61 gi|154425882|gb|AAI51298.1| LARP4 protein [Bos tau ( 733) 1325 242.2 5.5e-61 gi|109088032|ref|XP_001118195.1| PREDICTED: simila ( 259) 1303 238.0 3.5e-60 gi|194211976|ref|XP_001504301.2| PREDICTED: La rib ( 724) 1274 233.3 2.6e-58 gi|109482917|ref|XP_001064337.1| PREDICTED: simila ( 835) 1263 231.4 1.1e-57 gi|73996423|ref|XP_534803.2| PREDICTED: similar to ( 721) 1257 230.3 2e-57 gi|55959410|emb|CAI13660.1| La ribonucleoprotein d ( 338) 1251 229.0 2.3e-57 gi|124358932|ref|NP_001074417.1| La ribonucleoprot ( 718) 1255 230.0 2.5e-57 gi|114644773|ref|XP_001153643.1| PREDICTED: hypoth ( 732) 1247 228.6 6.7e-57 gi|148672158|gb|EDL04105.1| mCG123519 [Mus musculu ( 719) 1246 228.4 7.5e-57 gi|114644771|ref|XP_001153518.1| PREDICTED: c-Mpl ( 730) 1245 228.2 8.6e-57 gi|149032050|gb|EDL86962.1| rCG50767 [Rattus norve ( 722) 1242 227.7 1.2e-56 gi|114644767|ref|XP_001153817.1| PREDICTED: c-Mpl ( 723) 1242 227.7 1.2e-56 gi|114644769|ref|XP_509532.2| PREDICTED: hypotheti ( 724) 1242 227.7 1.2e-56 gi|74213698|dbj|BAC33905.2| unnamed protein produc ( 718) 1241 227.5 1.4e-56 gi|97536576|sp|Q8BWW4.2|LARP4_MOUSE RecName: Full= ( 719) 1241 227.5 1.4e-56 gi|119578546|gb|EAW58142.1| La ribonucleoprotein d ( 730) 1241 227.5 1.4e-56 gi|119578548|gb|EAW58144.1| La ribonucleoprotein d ( 723) 1238 227.0 2e-56 gi|189047131|sp|Q71RC2.3|LARP4_HUMAN RecName: Full ( 724) 1238 227.0 2e-56 gi|158256924|dbj|BAF84435.1| unnamed protein produ ( 724) 1237 226.8 2.2e-56 gi|190689783|gb|ACE86666.1| La ribonucleoprotein d ( 724) 1233 226.1 3.6e-56 gi|33341762|gb|AAQ15252.1|AF370416_1 PP13296 [Homo ( 723) 1232 226.0 4.1e-56 gi|74143369|dbj|BAE24178.1| unnamed protein produc ( 660) 1223 224.4 1.1e-55 gi|114644781|ref|XP_001153271.1| PREDICTED: hypoth ( 654) 1208 221.7 6.9e-55 gi|34531097|dbj|BAC86052.1| unnamed protein produc ( 654) 1207 221.6 7.8e-55 >>gi|134034151|sp|Q6A0A2.2|LARP5_MOUSE RecName: Full=La- (741 aa) initn: 4916 init1: 4916 opt: 4916 Z-score: 4633.7 bits: 868.1 E(): 0 Smith-Waterman score: 4916; 99.595% identity (99.730% similar) in 741 aa overlap (9-749:1-741) 10 20 30 40 50 60 mKIAA0 HYTFPVEPMTSDQDAKVVAEPQAQRVQEGKDSSHLMNGPISQTTSQTRSLPALTQVPTTK :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 MTSDQDAKVVAEPQAQRVQEGKDSSHLMNGPISQTTSQTRSLPALTQVPTTK 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 VSELNPNAKVWGTHMLHLEASSAAVGVNAAWEEAPGHPTDCDQQVLGLDDNGDGDKSREN ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|134 VSELNPNAKVWGTHMLHLEASSAAVGVNAAWEEAPGHPTDCDQQVLGLDANGDGDKSREN 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 AALPDAQEAEQTDMSTLALDHSEYEPLPENNDTGGNESQPESQEDPREVLKKTLEFCLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 AALPDAQEAEQTDMSTLALDHSEYEPLPENNDTGGNESQPESQEDPREVLKKTLEFCLSR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 ENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 ENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKVR 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 PNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 PNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAYK 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 YLREEVRTFQGKPIKARIKAKAIAINTFLPKNGFRPLDMNLYTQQRYATSFYSPPVYSPQ :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|134 YLREEVRTFQGKPIKARIKAKAIAINTFLPKNGFRPLDMNLYTQQRYATSFYLPPVYSPQ 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 QQFPLYSLITPQTWSTTHSYLDPPLVTPFPSTGFINGFTSPTFKPATSPLTSLRQYPPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 QQFPLYSLITPQTWSTTHSYLDPPLVTPFPSTGFINGFTSPTFKPATSPLTSLRQYPPRS 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 RNPSKSHLRHAIPSTERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQTRTRIQNPSAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 RNPSKSHLRHAIPSTERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQTRTRIQNPSAY 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 AKREIGTGRVEPSSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSPTPPKPPSPSFELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 AKREIGTGRVEPSSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSPTPPKPPSPSFELG 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 LSNFPPLPGAAGNLKTEDLFENRLSSLIIGSSKERNLSTDASTNTVPVVGPREPSVPAPC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 LSNFPPLPGAAGNLKTEDLFENRLSSLIIGSSKERNLSTDASTNTVPVVGPREPSVPAPC 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 AVSAAFERSPSPVHLPEDPKVAEKQRETQSVDRLPSTPTTTACKSVQVNGAATELRKPSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 AVSAAFERSPSPVHLPEDPKVAEKQRETQSVDRLPSTPTTTACKSVQVNGAATELRKPSY 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 AEICQRTSKDPSSSSPLQPPKEQKPSTVACGKEEKRLSEPVERHREPPALKSTPGVPKDQ :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|134 AEICQRTSKDPSSSSPLQPPKEQKPSTVACGKEEKQLSEPVERHREPPALKSTPGVPKDQ 660 670 680 690 700 710 730 740 mKIAA0 RRQPGRRASPPAAGKRLSKEQNTPPKSPQ ::::::::::::::::::::::::::::: gi|134 RRQPGRRASPPAAGKRLSKEQNTPPKSPQ 720 730 740 >>gi|148700338|gb|EDL32285.1| La ribonucleoprotein domai (743 aa) initn: 3285 init1: 3285 opt: 4902 Z-score: 4620.5 bits: 865.6 E(): 0 Smith-Waterman score: 4902; 99.327% identity (99.462% similar) in 743 aa overlap (9-749:1-743) 10 20 30 40 50 60 mKIAA0 HYTFPVEPMTSDQDAKVVAEPQAQRVQEGKDSSHLMNGPISQTTSQTRSLPALTQVPTTK :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MTSDQDAKVVAEPQAQRVQEGKDSSHLMNGPISQTTSQTRSLPALTQVPTTK 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 VSELNPNAKVWGTHMLHLEASSAAVGVNAAWEEAPGHPTDCDQQVLGLDDNGDGDKSREN ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|148 VSELNPNAKVWGTHMLHLEASSAAVGVNAAWEEAPGHPTDCDQQVLGLDANGDGDKSREN 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 AALPDAQEAEQTDMSTLALDHSEYEPLPENNDTGGNESQPESQEDPREVLKKTLEFCLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AALPDAQEAEQTDMSTLALDHSEYEPLPENNDTGGNESQPESQEDPREVLKKTLEFCLSR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 ENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKVR 180 190 200 210 220 230 250 260 270 280 290 mKIAA0 PNQNRCIVILREISESTPVE--EVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQA :::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|148 PNQNRCIVILREISESTPVEVSEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQA 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA0 YKYLREEVRTFQGKPIKARIKAKAIAINTFLPKNGFRPLDMNLYTQQRYATSFYSPPVYS :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|148 YKYLREEVRTFQGKPIKARIKAKAIAINTFLPKNGFRPLDMNLYTQQRYATSFYLPPVYS 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA0 PQQQFPLYSLITPQTWSTTHSYLDPPLVTPFPSTGFINGFTSPTFKPATSPLTSLRQYPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PQQQFPLYSLITPQTWSTTHSYLDPPLVTPFPSTGFINGFTSPTFKPATSPLTSLRQYPP 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA0 RSRNPSKSHLRHAIPSTERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQTRTRIQNPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RSRNPSKSHLRHAIPSTERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQTRTRIQNPS 420 430 440 450 460 470 480 490 500 510 520 530 mKIAA0 AYAKREIGTGRVEPSSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSPTPPKPPSPSFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AYAKREIGTGRVEPSSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSPTPPKPPSPSFE 480 490 500 510 520 530 540 550 560 570 580 590 mKIAA0 LGLSNFPPLPGAAGNLKTEDLFENRLSSLIIGSSKERNLSTDASTNTVPVVGPREPSVPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LGLSNFPPLPGAAGNLKTEDLFENRLSSLIIGSSKERNLSTDASTNTVPVVGPREPSVPA 540 550 560 570 580 590 600 610 620 630 640 650 mKIAA0 PCAVSAAFERSPSPVHLPEDPKVAEKQRETQSVDRLPSTPTTTACKSVQVNGAATELRKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PCAVSAAFERSPSPVHLPEDPKVAEKQRETQSVDRLPSTPTTTACKSVQVNGAATELRKP 600 610 620 630 640 650 660 670 680 690 700 710 mKIAA0 SYAEICQRTSKDPSSSSPLQPPKEQKPSTVACGKEEKRLSEPVERHREPPALKSTPGVPK :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|148 SYAEICQRTSKDPSSSSPLQPPKEQKPSTVACGKEEKQLSEPVERHREPPALKSTPGVPK 660 670 680 690 700 710 720 730 740 mKIAA0 DQRRQPGRRASPPAAGKRLSKEQNTPPKSPQ ::::::::::::::::::::::::::::::: gi|148 DQRRQPGRRASPPAAGKRLSKEQNTPPKSPQ 720 730 740 >>gi|149055309|gb|EDM06963.1| La ribonucleoprotein domai (738 aa) initn: 4132 init1: 4132 opt: 4735 Z-score: 4463.3 bits: 836.5 E(): 0 Smith-Waterman score: 4735; 95.946% identity (98.649% similar) in 740 aa overlap (9-748:1-738) 10 20 30 40 50 60 mKIAA0 HYTFPVEPMTSDQDAKVVAEPQAQRVQEGKDSSHLMNGPISQTTSQTRSLPALTQVPTTK ::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|149 MTSDQDAKVVAEPQAQRVQEGKDSSHLMNGPISQTTSQTSSLPALTQVPTTK 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 VSELNPNAKVWGTHMLHLEASSAAVGVNAAWEEAPGHPTDCDQQVLGLDDNGDGDKSREN :::::::::::::::::::::::::::::.::::::.::::::: : : :::::::::: gi|149 VSELNPNAKVWGTHMLHLEASSAAVGVNASWEEAPGRPTDCDQQ--GSDANGDGDKSREN 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 AALPDAQEAEQTDMSTLALDHSEYEPLPENNDTGGNESQPESQEDPREVLKKTLEFCLSR :::::::::::::::::::::.::::::::.::::::::::::::::::::::::::::: gi|149 AALPDAQEAEQTDMSTLALDHAEYEPLPENSDTGGNESQPESQEDPREVLKKTLEFCLSR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 ENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKVR 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 PNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAYK 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 YLREEVRTFQGKPIKARIKAKAIAINTFLPKNGFRPLDMNLYTQQRYATSFYSPPVYSPQ :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|149 YLREEVRTFQGKPIKARIKAKAIAINTFLPKNGFRPLDMNLYTQQRYATSFYLPPVYSPQ 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 QQFPLYSLITPQTWSTTHSYLDPPLVTPFPSTGFINGFTSPTFKPATSPLTSLRQYPPRS :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QQFPLYSLIAPQTWSTTHSYLDPPLVTPFPSTGFINGFTSPTFKPATSPLTSLRQYPPRS 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 RNPSKSHLRHAIPSTERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQTRTRIQNPSAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RNPSKSHLRHAIPSTERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQTRTRIQNPSAY 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 AKREIGTGRVEPSSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSPTPPKPPSPSFELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AKREIGTGRVEPSSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSPTPPKPPSPSFELG 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 LSNFPPLPGAAGNLKTEDLFENRLSSLIIGSSKERNLSTDASTNTVPVVGPREPSVPAPC :::::::::::::::.:::::::::::::::::::.:::::::::.::: :::::::::: gi|149 LSNFPPLPGAAGNLKAEDLFENRLSSLIIGSSKERSLSTDASTNTAPVVVPREPSVPAPC 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 AVSAAFERSPSPVHLPEDPKVAEKQRETQSVDRLPSTPTTTACKSVQVNGAATELRKPSY ::::::::::::.::::: ::::::::..::::::::::.:::::::::::::::::::: gi|149 AVSAAFERSPSPAHLPEDHKVAEKQREAHSVDRLPSTPTATACKSVQVNGAATELRKPSY 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 AEICQRTSKDPSSSSPLQPPKEQKPSTVACGKEEKRLSEPVERHREPPALKSTPGVPKDQ :::::::::.: :::::::::::::.:::::::::.:.::.::.:::::::::::::::: gi|149 AEICQRTSKEPPSSSPLQPPKEQKPNTVACGKEEKKLAEPAERYREPPALKSTPGVPKDQ 660 670 680 690 700 710 730 740 mKIAA0 RRQPGRRASPPAAGKRLSKEQNTPPKSPQ ::::::: :::::::::..::::::::: gi|149 RRQPGRRPSPPAAGKRLNREQNTPPKSP 720 730 >>gi|114629059|ref|XP_001137313.1| PREDICTED: La ribonuc (759 aa) initn: 3427 init1: 3427 opt: 4334 Z-score: 4085.4 bits: 766.6 E(): 0 Smith-Waterman score: 4334; 87.265% identity (95.040% similar) in 746 aa overlap (4-749:17-759) 10 20 30 40 mKIAA0 HYTFPVEPMTSDQDAKVVAEPQAQRVQEGKDSSHLMNGPISQTTSQT .::::::::::::::::::.:::::::::.:::::::::::::: gi|114 MWVLLGGKHPEVSITLLPVEPMTSDQDAKVVAEPQTQRVQEGKDSAHLMNGPISQTTSQT 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA0 RSLPALTQVPTTKVSELNPNAKVWGTHMLHLEASSAAVGVNAAWEEAPGHPTDCDQQVLG :.: :.:::.::::::::::.:::. .::::::::: ::.:::::. :: .: : : gi|114 SSIPPLSQVPATKVSELNPNAEVWGAPVLHLEASSAADGVSAAWEEVAGHHADRGPQ--G 70 80 90 100 110 110 120 130 140 150 160 mKIAA0 LDDNGDGDKSRENAALPDAQEAEQTDMSTLALDHSEYEPLPENNDTGGNESQPESQEDPR : :: ::...::::::: ::.. .::..::: :::. ::::..::::::::.:::::: gi|114 SDANGVGDQGHENAALPDPQESDPADMNALALGPSEYDSLPENSETGGNESQPDSQEDPR 120 130 140 150 160 170 170 180 190 200 210 220 mKIAA0 EVLKKTLEFCLSRENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EVLKKTLEFCLSRENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSL 180 190 200 210 220 230 230 240 250 260 270 280 mKIAA0 PLVQVDEKGEKVRPNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PLVQVDEKGEKVRPNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFI 240 250 260 270 280 290 290 300 310 320 330 340 mKIAA0 TFETEADAQQAYKYLREEVRTFQGKPIKARIKAKAIAINTFLPKNGFRPLDMNLYTQQRY :::::::::::::::::::.:::::::::::::::::::::::::::::::..::.:::: gi|114 TFETEADAQQAYKYLREEVKTFQGKPIKARIKAKAIAINTFLPKNGFRPLDVSLYAQQRY 300 310 320 330 340 350 350 360 370 380 390 400 mKIAA0 ATSFYSPPVYSPQQQFPLYSLITPQTWSTTHSYLDPPLVTPFPSTGFINGFTSPTFKPAT ::::: ::.:::::::::::::::::::.::::::::::::::.:::::::::::::::. gi|114 ATSFYFPPMYSPQQQFPLYSLITPQTWSATHSYLDPPLVTPFPNTGFINGFTSPTFKPAA 360 370 380 390 400 410 410 420 430 440 450 460 mKIAA0 SPLTSLRQYPPRSRNPSKSHLRHAIPSTERGPGLLESPSIFNFTADRLINGVRSPQTRQA :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|114 SPLTSLRQYPPRSRNPSKSHLRHAIPSAERGPGLLESPSIFNFTADRLINGVRSPQTRQA 420 430 440 450 460 470 470 480 490 500 510 520 mKIAA0 GQTRTRIQNPSAYAKREIGTGRVEPSSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSP ::::::::::::::::: : :::::.:::::::::::::::::::::::::::::::::: gi|114 GQTRTRIQNPSAYAKREAGPGRVEPGSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSP 480 490 500 510 520 530 530 540 550 560 570 580 mKIAA0 TPPKPPSPSFELGLSNFPPLPGAAGNLKTEDLFENRLSSLIIGSSKERNLSTDASTNTVP :::::::::::::::.::::::::::::::::::::::::::: ::::.::.:::.::.: gi|114 TPPKPPSPSFELGLSSFPPLPGAAGNLKTEDLFENRLSSLIIGPSKERTLSADASVNTLP 540 550 560 570 580 590 590 600 610 620 630 640 mKIAA0 VVGPREPSVPAPCAVSAAFERSPSPVHLPEDPKVAEKQRETQSVDRLPSTPTTTACKSVQ :: ::::::: :::::..::::::.:::.::::::::.::.:::::: . :.::::::: gi|114 VVVSREPSVPASCAVSATYERSPSPAHLPDDPKVAEKQKETHSVDRLPPALTATACKSVQ 600 610 620 630 640 650 650 660 670 680 690 700 mKIAA0 VNGAATELRKPSYAEICQRTSKDPSSSSPLQPPKEQKPSTVACGKEEKRLSEPVERHREP ::::::::::::::::::::::.: :: :::: :::::.::.::::::.:.::.::.::: gi|114 VNGAATELRKPSYAEICQRTSKEPPSS-PLQPQKEQKPNTVGCGKEEKKLAEPAERYREP 660 670 680 690 700 710 710 720 730 740 mKIAA0 PALKSTPGVPKDQRRQPGRRASPPAAGKRLSKEQNTPPKSPQ ::::::::.:.:::: : : :: : :::::.::.::::::: gi|114 PALKSTPGAPRDQRRPAGGRPSPLAMGKRLSREQSTPPKSPQ 720 730 740 750 >>gi|134034150|sp|Q92615.3|LARP5_HUMAN RecName: Full=La- (738 aa) initn: 3444 init1: 3444 opt: 4322 Z-score: 4074.3 bits: 764.5 E(): 0 Smith-Waterman score: 4322; 87.584% identity (95.277% similar) in 741 aa overlap (9-749:1-738) 10 20 30 40 50 60 mKIAA0 HYTFPVEPMTSDQDAKVVAEPQAQRVQEGKDSSHLMNGPISQTTSQTRSLPALTQVPTTK ::::::::::::::.:::::::::.:::::::::::::: :.: :.:::.:: gi|134 MTSDQDAKVVAEPQTQRVQEGKDSAHLMNGPISQTTSQTSSIPPLSQVPATK 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 VSELNPNAKVWGTHMLHLEASSAAVGVNAAWEEAPGHPTDCDQQVLGLDDNGDGDKSREN ::::::::.:::. .::::::::: ::.:::::. :: .: : : : :::::...:: gi|134 VSELNPNAEVWGAPVLHLEASSAADGVSAAWEEVAGHHADRGPQ--GSDANGDGDQGHEN 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 AALPDAQEAEQTDMSTLALDHSEYEPLPENNDTGGNESQPESQEDPREVLKKTLEFCLSR ::::: ::.. .::..::: :::. ::::..::::::::.::::::::::::::::::: gi|134 AALPDPQESDPADMNALALGPSEYDSLPENSETGGNESQPDSQEDPREVLKKTLEFCLSR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 ENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 ENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKVR 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 PNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|134 PNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAYK 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 YLREEVRTFQGKPIKARIKAKAIAINTFLPKNGFRPLDMNLYTQQRYATSFYSPPVYSPQ ::::::.:::::::::::::::::::::::::::::::..::.::::::::: ::.:::: gi|134 YLREEVKTFQGKPIKARIKAKAIAINTFLPKNGFRPLDVSLYAQQRYATSFYFPPMYSPQ 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 QQFPLYSLITPQTWSTTHSYLDPPLVTPFPSTGFINGFTSPTFKPATSPLTSLRQYPPRS :::::::::::::::.::::::::::::::.::::::::::.::::.::::::::::::: gi|134 QQFPLYSLITPQTWSATHSYLDPPLVTPFPNTGFINGFTSPAFKPAASPLTSLRQYPPRS 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 RNPSKSHLRHAIPSTERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQTRTRIQNPSAY ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|134 RNPSKSHLRHAIPSAERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQTRTRIQNPSAY 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 AKREIGTGRVEPSSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSPTPPKPPSPSFELG :::: : :::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|134 AKREAGPGRVEPGSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSPTPPKPPSPSFELG 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 LSNFPPLPGAAGNLKTEDLFENRLSSLIIGSSKERNLSTDASTNTVPVVGPREPSVPAPC ::.::::::::::::::::::::::::::: ::::.::.:::.::.::: ::::::: : gi|134 LSSFPPLPGAAGNLKTEDLFENRLSSLIIGPSKERTLSADASVNTLPVVVSREPSVPASC 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 AVSAAFERSPSPVHLPEDPKVAEKQRETQSVDRLPSTPTTTACKSVQVNGAATELRKPSY ::::..::::::.:::.:::::::::::.:::::::. :.:::::::::::::::::::: gi|134 AVSATYERSPSPAHLPDDPKVAEKQRETHSVDRLPSALTATACKSVQVNGAATELRKPSY 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 AEICQRTSKDPSSSSPLQPPKEQKPSTVACGKEEKRLSEPVERHREPPALKSTPGVPKDQ :::::::::.: :: :::: :::::.::.::::::.:.::.::.:::::::::::.:.:: gi|134 AEICQRTSKEPPSS-PLQPQKEQKPNTVGCGKEEKKLAEPAERYREPPALKSTPGAPRDQ 660 670 680 690 700 730 740 mKIAA0 RRQPGRRASPPAAGKRLSKEQNTPPKSPQ :: : : :: : :::::.::.::::::: gi|134 RRPAGGRPSPSAMGKRLSREQSTPPKSPQ 710 720 730 >>gi|114629061|ref|XP_507619.2| PREDICTED: La ribonucleo (738 aa) initn: 3427 init1: 3427 opt: 4302 Z-score: 4055.4 bits: 761.0 E(): 0 Smith-Waterman score: 4302; 87.314% identity (95.007% similar) in 741 aa overlap (9-749:1-738) 10 20 30 40 50 60 mKIAA0 HYTFPVEPMTSDQDAKVVAEPQAQRVQEGKDSSHLMNGPISQTTSQTRSLPALTQVPTTK ::::::::::::::.:::::::::.:::::::::::::: :.: :.:::.:: gi|114 MTSDQDAKVVAEPQTQRVQEGKDSAHLMNGPISQTTSQTSSIPPLSQVPATK 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 VSELNPNAKVWGTHMLHLEASSAAVGVNAAWEEAPGHPTDCDQQVLGLDDNGDGDKSREN ::::::::.:::. .::::::::: ::.:::::. :: .: : : : :: ::...:: gi|114 VSELNPNAEVWGAPVLHLEASSAADGVSAAWEEVAGHHADRGPQ--GSDANGVGDQGHEN 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 AALPDAQEAEQTDMSTLALDHSEYEPLPENNDTGGNESQPESQEDPREVLKKTLEFCLSR ::::: ::.. .::..::: :::. ::::..::::::::.::::::::::::::::::: gi|114 AALPDPQESDPADMNALALGPSEYDSLPENSETGGNESQPDSQEDPREVLKKTLEFCLSR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 ENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKVR 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 PNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAYK 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 YLREEVRTFQGKPIKARIKAKAIAINTFLPKNGFRPLDMNLYTQQRYATSFYSPPVYSPQ ::::::.:::::::::::::::::::::::::::::::..::.::::::::: ::.:::: gi|114 YLREEVKTFQGKPIKARIKAKAIAINTFLPKNGFRPLDVSLYAQQRYATSFYFPPMYSPQ 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 QQFPLYSLITPQTWSTTHSYLDPPLVTPFPSTGFINGFTSPTFKPATSPLTSLRQYPPRS :::::::::::::::.::::::::::::::.:::::::::::::::.::::::::::::: gi|114 QQFPLYSLITPQTWSATHSYLDPPLVTPFPNTGFINGFTSPTFKPAASPLTSLRQYPPRS 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 RNPSKSHLRHAIPSTERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQTRTRIQNPSAY ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|114 RNPSKSHLRHAIPSAERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQTRTRIQNPSAY 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 AKREIGTGRVEPSSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSPTPPKPPSPSFELG :::: : :::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AKREAGPGRVEPGSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSPTPPKPPSPSFELG 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 LSNFPPLPGAAGNLKTEDLFENRLSSLIIGSSKERNLSTDASTNTVPVVGPREPSVPAPC ::.::::::::::::::::::::::::::: ::::.::.:::.::.::: ::::::: : gi|114 LSSFPPLPGAAGNLKTEDLFENRLSSLIIGPSKERTLSADASVNTLPVVVSREPSVPASC 540 550 560 570 580 590 610 620 630 640 650 660 mKIAA0 AVSAAFERSPSPVHLPEDPKVAEKQRETQSVDRLPSTPTTTACKSVQVNGAATELRKPSY ::::..::::::.:::.::::::::.::.:::::: . :.:::::::::::::::::::: gi|114 AVSATYERSPSPAHLPDDPKVAEKQKETHSVDRLPPALTATACKSVQVNGAATELRKPSY 600 610 620 630 640 650 670 680 690 700 710 720 mKIAA0 AEICQRTSKDPSSSSPLQPPKEQKPSTVACGKEEKRLSEPVERHREPPALKSTPGVPKDQ :::::::::.: :: :::: :::::.::.::::::.:.::.::.:::::::::::.:.:: gi|114 AEICQRTSKEPPSS-PLQPQKEQKPNTVGCGKEEKKLAEPAERYREPPALKSTPGAPRDQ 660 670 680 690 700 730 740 mKIAA0 RRQPGRRASPPAAGKRLSKEQNTPPKSPQ :: : : :: : :::::.::.::::::: gi|114 RRPAGGRPSPLAMGKRLSREQSTPPKSPQ 710 720 730 >>gi|119606937|gb|EAW86531.1| La ribonucleoprotein domai (723 aa) initn: 2329 init1: 1924 opt: 4036 Z-score: 3805.0 bits: 714.7 E(): 3.1e-203 Smith-Waterman score: 4147; 84.853% identity (92.225% similar) in 746 aa overlap (9-749:1-723) 10 20 30 40 50 60 mKIAA0 HYTFPVEPMTSDQDAKVVAEPQAQRVQEGKDSSHLMNGPISQTTSQTRSLPALTQVPTTK ::::::::::::::.:::::::::.:: ::.:: gi|119 MTSDQDAKVVAEPQTQRVQEGKDSAHL--------------------VPATK 10 20 30 70 80 90 100 110 120 mKIAA0 VSELNPNAKVWGTHMLHLEASSAAVGVNAAWEEAPGHPTDCDQQVLGLDDNGDGDKSREN ::::::::.:::. .::::::::: ::.:::::. :: .: : : : :::::...:: gi|119 VSELNPNAEVWGAPVLHLEASSAADGVSAAWEEVAGHHADRGPQ--GSDANGDGDQGHEN 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 AALPDAQEAEQTDMSTLALDHSEYEPLPENNDTGGNESQPESQEDPREVLKKTLEFCLSR ::::: ::.. .::..::: :::. ::::..::::::::.::::::::::::::::::: gi|119 AALPDPQESDPADMNALALGPSEYDSLPENSETGGNESQPDSQEDPREVLKKTLEFCLSR 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 ENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKVR 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 PNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAYK 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 YLREEVRTFQGKPIKARIKAKAIAINTFLPKNGFRPLDMNLYTQQRYATSFYSPPVYSPQ ::::::.:::::::::::::::::::::::::::::::..::.::::::::: ::.:::: gi|119 YLREEVKTFQGKPIKARIKAKAIAINTFLPKNGFRPLDVSLYAQQRYATSFYFPPMYSPQ 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 QQFPLYSLITPQTWSTTHSYLDPPLVTPFPSTGFINGFTSPTFKPATSPLTSLRQYPPRS :::::::::::::::.::::::::::::::.::::::::::.::::.::::::::::::: gi|119 QQFPLYSLITPQTWSATHSYLDPPLVTPFPNTGFINGFTSPAFKPAASPLTSLRQYPPRS 340 350 360 370 380 390 430 440 450 460 470 mKIAA0 R-----NPSKSHLRHAIPSTERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQTRTRIQ : :::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|119 RQVPGRNPSKSHLRHAIPSAERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQTRTRIQ 400 410 420 430 440 450 480 490 500 510 520 530 mKIAA0 NPSAYAKREIGTGRVEPSSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSPTPPKPPSP ::::::::: : :::::.:::::::::::::::::::::::::::::::::::::::::: gi|119 NPSAYAKREAGPGRVEPGSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSPTPPKPPSP 460 470 480 490 500 510 540 550 560 570 580 590 mKIAA0 SFELGLSNFPPLPGAAGNLKTEDLFENRLSSLIIGSSKERNLSTDASTNTVPVVGPREPS :::::::.::::::::::::::::::::::::::: ::::.::.:::.::.::: :::: gi|119 SFELGLSSFPPLPGAAGNLKTEDLFENRLSSLIIGPSKERTLSADASVNTLPVVVSREPS 520 530 540 550 560 570 600 610 620 630 640 650 mKIAA0 VPAPCAVSAAFERSPSPVHLPEDPKVAEKQRETQSVDRLPSTPTTTACKSVQVNGAATEL ::: :::::..::::::.:::.:::::::::::.:::::::. :.::::::::::::::: gi|119 VPASCAVSATYERSPSPAHLPDDPKVAEKQRETHSVDRLPSALTATACKSVQVNGAATEL 580 590 600 610 620 630 660 670 680 690 700 710 mKIAA0 RKPSYAEICQRTSKDPSSSSPLQPPKEQKPSTVACGKEEKRLSEPVERHREPPALKSTPG ::::::::::::::.: :: :::: :::::.::.::::::.:.::.::.::::::::::: gi|119 RKPSYAEICQRTSKEPPSS-PLQPQKEQKPNTVGCGKEEKKLAEPAERYREPPALKSTPG 640 650 660 670 680 720 730 740 mKIAA0 VPKDQRRQPGRRASPPAAGKRLSKEQNTPPKSPQ .:.:::: : : :: : :::::.::.::::::: gi|119 APRDQRRPAGGRPSPSAMGKRLSREQSTPPKSPQ 690 700 710 720 >>gi|149743613|ref|XP_001501481.1| PREDICTED: similar to (729 aa) initn: 4140 init1: 2781 opt: 3987 Z-score: 3758.8 bits: 706.1 E(): 1.2e-200 Smith-Waterman score: 4180; 85.580% identity (93.127% similar) in 742 aa overlap (9-749:1-729) 10 20 30 40 50 60 mKIAA0 HYTFPVEPMTSDQDAKVVAEPQAQRVQEGKDSSHLMNGPISQTTSQTRSLPALTQVPTTK ::::::::::::::.::::::::..:::::::::.:::: :.:::.::::.: gi|149 MTSDQDAKVVAEPQGQRVQEGKDGAHLMNGPISQSTSQTSSIPALSQVPTAK 10 20 30 40 50 70 80 90 100 110 mKIAA0 VSELNPNAKVWGTHMLHLEASSAA-VGVNAAWEEAPGHPTDCDQQVLGLDDNGDGDKSRE :::::::::::::::::.:::::: ::.:::::. :. :: :. ::: .::::::.. gi|149 VSELNPNAKVWGTHMLHVEASSAADSGVSAAWEETHGRRTDSGQE--GLDASGDGDKSHD 60 70 80 90 100 110 120 130 140 150 160 170 mKIAA0 NAALPDAQEAEQTDMSTLALDHSEYEPLPENNDTGGNESQPESQEDPREVLKKTLEFCLS :::: : ::..:: :.:::::::::: :::..::::::::::::::::::::::::::: gi|149 NAALSDLQESNQTAMNTLALDHSEYESPPENSETGGNESQPESQEDPREVLKKTLEFCLS 120 130 140 150 160 170 180 190 200 210 220 230 mKIAA0 RENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKV :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|149 RENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDMDLIVEVLRSLPLVQVDEKGEKV 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 RPNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAY :::::::::::::: :::::::::::::: :::::::::::::::::::::::::::::: gi|149 RPNQNRCIVILREIPESTPVEEVEALFKGANLPKFINCEFAYNDNWFITFETEADAQQAY 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA0 KYLREEVRTFQGKPIKARIKAKAIAINTFLPKNGFRPLDMNLYTQQRYATSFYSPPVYSP :::::::.::::::::::::::::::::::::::::::::.:::::::..::: ::::.: gi|149 KYLREEVKTFQGKPIKARIKAKAIAINTFLPKNGFRPLDMSLYTQQRYTASFYLPPVYGP 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA0 QQQFPLYSLITPQTWSTTHSYLDPPLVTPFPSTGFINGFTSPTFKPATSPLTSLRQYPPR ::::::::::.:::::..:::::::::::::::::::::::::::::.:::::::::::: gi|149 QQQFPLYSLIAPQTWSAAHSYLDPPLVTPFPSTGFINGFTSPTFKPAASPLTSLRQYPPR 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA0 SRNPSKSHLRHAIPSTERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQTRTRIQNPSA :::::::::::::::.::::::::::::::::::::.::::::::: .:: :::.::: . gi|149 SRNPSKSHLRHAIPSAERGPGLLESPSIFNFTADRLLNGVRSPQTRPTGQPRTRVQNPPT 420 430 440 450 460 470 480 490 500 510 520 530 mKIAA0 YAKREIGTGRVEPSSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSPTPPKPPSPSFEL ::::.::::::: :::::::::::::::::::::::::::: :::::::::::::::::: gi|149 YAKRDIGTGRVEQSSLESSPGLGRGRKNSFGYRKKREEKFTRSQTQSPTPPKPPSPSFEL 480 490 500 510 520 530 540 550 560 570 580 590 mKIAA0 GLSNFPPLPGAAGNLKTEDLFENRLSSLIIGSSKERNLSTDASTNTVPVVGPREPSVPAP :::::::::::::.::::: ::::.:::::::.:..:::::: :.: ::::::::: gi|149 GLSNFPPLPGAAGHLKTED-----LSSLLIGSSKERSLNADASTNTPPAVTPREPSVPAP 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 CAVSAAFERSPSPVHLPEDPKVAEKQRETQSVDRLPSTPTTTACKSVQVNGAATELRKPS :.:::: :::::.::::::::.:::::: :.:::::: :::: :::::::::::::::: gi|149 CTVSAACARSPSPTHLPEDPKVVEKQRETPSMDRLPSTLTTTASKSVQVNGAATELRKPS 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA0 YAEICQRTSKDPSSSSPLQPPKEQKPSTVACGKEEKRLSEPVERHREPPALKSTPGVPKD :::::::::..: : :::: :::::.::.::::::.: : ::::. ::.:: ::: gi|149 YAEICQRTSREPPVS-PLQPQKEQKPNTVGCGKEEKKLPE-----REPPTPKSNPGPPKD 650 660 670 680 690 720 730 740 mKIAA0 QRRQPGRRASPPAAGKRLSKEQNTPPKSPQ ::: :::: ::::.::: .::.::::::: gi|149 QRRPPGRRPSPPATGKRPHREQSTPPKSPQ 700 710 720 >>gi|119905477|ref|XP_582060.3| PREDICTED: similar to La (730 aa) initn: 3695 init1: 3081 opt: 3987 Z-score: 3758.8 bits: 706.1 E(): 1.2e-200 Smith-Waterman score: 3987; 80.914% identity (91.667% similar) in 744 aa overlap (9-749:1-730) 10 20 30 40 50 60 mKIAA0 HYTFPVEPMTSDQDAKVVAEPQAQRVQEGKDSSHLMNGPISQTTSQTRSLPALTQVPTTK ::::::.:::::::.:::::::::.:::::::::::::. :.:::.::::.: gi|119 MTSDQDTKVVAEPQGQRVQEGKDSTHLMNGPISQTTSQSSSIPALSQVPTAK 10 20 30 40 50 70 80 90 100 110 mKIAA0 VSELNPNAKVWGTHMLHLEASSAAVG-VNAAWEEAPGHPTDCDQQVLGLDDNGDGDKSRE ::::::::::::: .:.::: .:: : :...:: ::. :::: :::::::.. gi|119 VSELNPNAKVWGTPLLQLEARGAADGGVSTVWEAPPGRGH------LGLDTNGDGDKSHD 60 70 80 90 100 120 130 140 150 160 170 mKIAA0 NAALPDAQEAEQTDMSTLALDHSEYEPLPENNDTGGNESQPESQEDPREVLKKTLEFCLS :..: : ::..:: ::::.::::::: ::...::::.:::::::::::::::::::::: gi|119 NVGLSDLQESDQTTMSTLGLDHSEYESPPESGETGGNDSQPESQEDPREVLKKTLEFCLS 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA0 RENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKV :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|119 RENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDMDLIVEVLRSLPLVQVDEKGEKV 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA0 RPNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAY :::::::::::::: ::::::::::::::::::.:::::::::::::::::::::::::: gi|119 RPNQNRCIVILREIPESTPVEEVEALFKGDNLPRFINCEFAYNDNWFITFETEADAQQAY 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA0 KYLREEVRTFQGKPIKARIKAKAIAINTFLPKNGFRPLDMNLYTQQRYATSFYSPPVYSP :::::::.::::::::::::::::::::::::::::::::.:::::::..::: :::::: gi|119 KYLREEVKTFQGKPIKARIKAKAIAINTFLPKNGFRPLDMSLYTQQRYTASFYLPPVYSP 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA0 QQQFPLYSLITPQTWSTTHSYLDPPLVTPFPSTGFINGFTSPTFKPATSPLTSLRQYPPR ::::::::::.:::::.::::::::::::::.:::::::::::::::.:::.:::::::: gi|119 QQQFPLYSLIAPQTWSATHSYLDPPLVTPFPNTGFINGFTSPTFKPAASPLASLRQYPPR 350 360 370 380 390 400 420 430 440 450 460 470 mKIAA0 SRNPSKSHLRHAIPSTERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQTRTRIQNPSA :::::::::::::::.::::::::::::::::::::.:::::::.::..: :.:.::: : gi|119 SRNPSKSHLRHAIPSAERGPGLLESPSIFNFTADRLMNGVRSPQVRQTAQPRARLQNPPA 410 420 430 440 450 460 480 490 500 510 520 530 mKIAA0 YAKREIGTGRVEPSSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSPTPPKPPSPSFEL .:::..: :::: ::.:::::::::::.::::::::::::: :::::::::.:::::::: gi|119 FAKRDVGPGRVEQSSFESSPGLGRGRKSSFGYRKKREEKFTRSQTQSPTPPRPPSPSFEL 470 480 490 500 510 520 540 550 560 570 580 590 mKIAA0 GLSNFPPLPGAAGNLKTEDLFENRLSSLIIGSSKERNLSTDASTNTVPVVGPREPSVPAP :::.:::::::::.::::::::::::.:. :.::::.:..::::::.:.: :::: :: gi|119 GLSSFPPLPGAAGHLKTEDLFENRLSGLLTGTSKERSLNADASTNTLPAVHPREPL--AP 530 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 CAVSAAFERSPSPVHLPEDPKVAEKQRETQSVDRLPSTP--TTTACKSVQVNGAATELRK :::::: ::.:::.. ::: ::.:::::: :::: : . .::: :::::::::.:::: gi|119 CAVSAACERTPSPARPPEDAKVVEKQRETPSVDRPPPALALSTTASKSVQVNGAASELRK 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA0 PSYAEICQRTSKDPSSSSPLQPPKEQKPSTVACGKEEKRLSEPVERHREPPALKSTPGVP :::::::::::..: :: ::::::::::. :. ::::....: ::::: ::.:: : gi|119 PSYAEICQRTSREPPSS-PLQPPKEQKPNPVGSGKEERKVTE-----REPPAPKSSPGPP 650 660 670 680 690 720 730 740 mKIAA0 KDQRRQPGRRASPPAAGKRLSKEQNTPPKSPQ ::::: ::: :::. :.: .::. ::. :: gi|119 KDQRRPLGRRPSPPGLGRRPHREQSPPPRPPQ 700 710 720 730 >>gi|74197298|dbj|BAC31273.2| unnamed protein product [M (594 aa) initn: 3752 init1: 3752 opt: 3758 Z-score: 3544.3 bits: 666.2 E(): 1e-188 Smith-Waterman score: 3767; 88.095% identity (88.095% similar) in 672 aa overlap (9-680:1-594) 10 20 30 40 50 60 mKIAA0 HYTFPVEPMTSDQDAKVVAEPQAQRVQEGKDSSHLMNGPISQTTSQTRSLPALTQVPTTK :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MTSDQDAKVVAEPQAQRVQEGKDSSHLMNGPISQTTSQTRSLPALTQVPTTK 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 VSELNPNAKVWGTHMLHLEASSAAVGVNAAWEEAPGHPTDCDQQVLGLDDNGDGDKSREN ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|741 VSELNPNAKVWGTHMLHLEASSAAVGVNAAWEEAPGHPTDCDQQVLGLDANGDGDKSREN 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 AALPDAQEAEQTDMSTLALDHSEYEPLPENNDTGGNESQPESQEDPREVLKKTLEFCLSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 AALPDAQEAEQTDMSTLALDHSEYEPLPENNDTGGNESQPESQEDPREVLKKTLEFCLSR 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 ENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKVR 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 PNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAYK 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 YLREEVRTFQGKPIKARIKAKAIAINTFLPKNGFRPLDMNLYTQQRYATSFYSPPVYSPQ :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|741 YLREEVRTFQGKPIKARIKAKAIAINTFLPKNGFRPLDMNLYTQQRYATSFYLPPVYSPQ 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 QQFPLYSLITPQTWSTTHSYLDPPLVTPFPSTGFINGFTSPTFKPATSPLTSLRQYPPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 QQFPLYSLITPQTWSTTHSYLDPPLVTPFPSTGFINGFTSPTFKPATSPLTSLRQYPPRS 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA0 RNPSKSHLRHAIPSTERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQTRTRIQNPSAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RNPSKSHLRHAIPSTERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQTRTRIQNPSAY 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA0 AKREIGTGRVEPSSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSPTPPKPPSPSFELG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 AKREIGTGRVEPSSLESSPGLGRGRKNSFGYRKKREEKFTSSQTQSPTPPKPPSPSFELG 480 490 500 510 520 530 550 560 570 580 590 600 mKIAA0 LSNFPPLPGAAGNLKTEDLFENRLSSLIIGSSKERNLSTDASTNTVPVVGPREPSVPAPC ::::::::::::::::::::::::::::::::::: gi|741 LSNFPPLPGAAGNLKTEDLFENRLSSLIIGSSKER------------------------- 540 550 560 610 620 630 640 650 660 mKIAA0 AVSAAFERSPSPVHLPEDPKVAEKQRETQSVDRLPSTPTTTACKSVQVNGAATELRKPSY ::::::: gi|741 -----------------------------------------------------ELRKPSY 570 670 680 690 700 710 720 mKIAA0 AEICQRTSKDPSSSSPLQPPKEQKPSTVACGKEEKRLSEPVERHREPPALKSTPGVPKDQ :::::::::::::::::::: gi|741 AEICQRTSKDPSSSSPLQPP 580 590 749 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 11:42:22 2009 done: Fri Mar 13 11:50:28 2009 Total Scan time: 1071.540 Total Display time: 0.320 Function used was FASTA [version 34.26.5 April 26, 2007]