Comparison of KIAA cDNA sequences between mouse and human (KIAA1336)

<<Original sequence data>>

mouse  mKIAA1336 (mfj00936)     length:   3941 bp, CDS:    56 -  2845
human   KIAA1336  (bg00080)     length:   6950 bp, CDS:     3 -  3662

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:     23 -    79      33       23      41.1
  CDS:     80 -  3255    2423      367      13.2
3'UTR:   3256 -  6954     591      522      46.9

amino acid

  CDS:     80 -  3255     841      218      20.6
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
                                      F  S  D  P  P  V  L  A  N  
mfj00936     1 ......................CTTCTCCGATCCACCAGTGCTCGCAAAT 28
                                     |||  | || |  |  || ||| | | |
bg00080      1 GCGGTTGCCAGGGCGACGGGAGCTTTCCGGAGCTGCTGGTACTCCCGATT 50
                 G  C  Q  G  D  G  S  F  P  E  L  L  V  L  P  I  

            51 ----+----*----+----*----+----*----+----*----+----* 100
               G  G  V  E  P    Y  I  L  A  C  L  D  R  W   G  R 
mfj00936    29 GGAGGTGTAGAACCCGTTATATATTAGCGTGCCTTGACCGCTGTGGGTCG 78
               ||||  ||||||||   |   |  | | | |||||  | || |   ||  
bg00080     51 GGAGACGTAGAACC..GTTACTTGTCGAGGGCCTTAGCGGCCG.CCGTGA 97
               G  D  V  E  P    L  L  V  E  G  L  S  G  R   R  D 

           101 ----+----*----+----*----+----*----+----*----+----* 150
                L  L  R  V  P  T  M  F  F  Y  L  S  K  K  I  A  V
mfj00936    79 TCTTCTCCGAGTTCCCACGATGTTCTTCTACCTGAGCAAGAAAATTGCTG 128
                | |||| | | |||||||||||||||||||||||||||||||||| |  
bg00080     98 CCCTCTCGGGGATCCCACGATGTTCTTCTACCTGAGCAAGAAAATTTCCA 147
                P  L  G  D  P  T  M  F  F  Y  L  S  K  K  I  S  I

           151 ----+----*----+----*----+----*----+----*----+----* 200
                 P  N  N  V  K  L  K  C  I  S  W  N  K  D  Q  G  
mfj00936   129 TTCCCAATAATGTGAAGCTGAAATGTATATCCTGGAACAAGGACCAAGGG 178
               |||||||||| ||||||||| | ||| |||||||||||||||| ||||||
bg00080    148 TTCCCAATAACGTGAAGCTGCAGTGTGTATCCTGGAACAAGGAACAAGGG 197
                 P  N  N  V  K  L  Q  C  V  S  W  N  K  E  Q  G  

           201 ----+----*----+----*----+----*----+----*----+----* 250
               F  I  A  C  G  G  E  D  G  L  L  K  V  L  R  L  E 
mfj00936   179 TTCATAGCATGTGGCGGTGAGGATGGATTACTGAAAGTTTTAAGACTCGA 228
               ||||||||||| || ||||| |||||||||||||||||||| | | | ||
bg00080    198 TTCATAGCATGCGGTGGTGAAGATGGATTACTGAAAGTTTTGAAATTAGA 247
               F  I  A  C  G  G  E  D  G  L  L  K  V  L  K  L  E 

           251 ----+----*----+----*----+----*----+----*----+----* 300
                T  Q  T  D  D  S  K  L  R  G  L  A  A  P  S  N  L
mfj00936   229 GACACAGACAGATGACTCAAAGCTGAGGGGTCTAGCCGCCCCTAGTAACC 278
               ||| |||||||||||  ||||  ||||||| || || ||||| |||||||
bg00080    248 GACGCAGACAGATGATGCAAAATTGAGGGGCCTTGCAGCCCCCAGTAACC 297
                T  Q  T  D  D  A  K  L  R  G  L  A  A  P  S  N  L

           301 ----+----*----+----*----+----*----+----*----+----* 350
                 S  M  N  Q  N  L  E  G  H  S  G  A  V  Q  V  V  
mfj00936   279 TTTCCATGAACCAAAATCTTGAAGGTCATAGTGGTGCTGTTCAAGTTGTA 328
               |||| ||||| || | ||||||||||||||||||| ||||||||||||||
bg00080    298 TTTCTATGAATCAGACTCTTGAAGGTCATAGTGGTTCTGTTCAAGTTGTA 347
                 S  M  N  Q  T  L  E  G  H  S  G  S  V  Q  V  V  

           351 ----+----*----+----*----+----*----+----*----+----* 400
               T  W  N  E  Q  Y  Q  K  L  T  T  S  D  Q  N  G  L 
mfj00936   329 ACGTGGAATGAACAGTATCAGAAGTTGACTACCAGTGATCAAAATGGGCT 378
               || |||||||| ||||||||||||||||||||||||||| |||| |||||
bg00080    348 ACATGGAATGAGCAGTATCAGAAGTTGACTACCAGTGATGAAAACGGGCT 397
               T  W  N  E  Q  Y  Q  K  L  T  T  S  D  E  N  G  L 

           401 ----+----*----+----*----+----*----+----*----+----* 450
                I  I  V  W  M  L  Y  K  G  S  W  Y  E  E  M  I  N
mfj00936   379 TATCATTGTCTGGATGCTGTATAAAGGCTCTTGGTATGAGGAGATGATCA 428
               ||||||||| |||||| | |||||||||||||||  ||||||||||||||
bg00080    398 TATCATTGTGTGGATGTTATATAAAGGCTCTTGGATTGAGGAGATGATCA 447
                I  I  V  W  M  L  Y  K  G  S  W  I  E  E  M  I  N

           451 ----+----*----+----*----+----*----+----*----+----* 500
                 N  R  N  K  S  V  V  R  S  M  S  W  N  A  D  G  
mfj00936   429 ACAATCGCAACAAGTCTGTGGTTCGAAGCATGAGCTGGAATGCGGACGGA 478
               ||||||| || || || || ||||| || |||||||||||||| ||||||
bg00080    448 ACAATCGAAATAAATCAGTTGTTCGCAGTATGAGCTGGAATGCTGACGGA 497
                 N  R  N  K  S  V  V  R  S  M  S  W  N  A  D  G  

           501 ----+----*----+----*----+----*----+----*----+----* 550
               Q  K  I  C  I  V  Y  E  D  G  A  V  I  V  G  S  V 
mfj00936   479 CAGAAGATCTGCATTGTGTACGAAGATGGAGCTGTGATCGTCGGCTCAGT 528
               ||||||||||||||||| || |||||||| |||||||| || || |||||
bg00080    498 CAGAAGATCTGCATTGTATATGAAGATGGGGCTGTGATAGTTGGTTCAGT 547
               Q  K  I  C  I  V  Y  E  D  G  A  V  I  V  G  S  V 

           551 ----+----*----+----*----+----*----+----*----+----* 600
                D  G  N  R  I  W  G  K  D  L  K  G  I  Q  L  C  H
mfj00936   529 AGACGGGAATCGGATTTGGGGGAAAGACCTGAAGGGAATTCAGCTGTGCC 578
                || || ||||| |||||||| |||||||||||||| || ||||| | ||
bg00080    548 GGATGGCAATCGTATTTGGGGAAAAGACCTGAAGGGTATACAGCTATCCC 597
                D  G  N  R  I  W  G  K  D  L  K  G  I  Q  L  S  H

           601 ----+----*----+----*----+----*----+----*----+----* 650
                 V  T  W  S  A  D  S  K  I  L  L  F  G  M  A  N  
mfj00936   579 ATGTGACCTGGTCTGCAGATAGTAAAATCCTACTTTTTGGAATGGCAAAT 628
               |||| || |||||||| || |||||| || ||||||||||||||||||||
bg00080    598 ATGTAACATGGTCTGCGGACAGTAAAGTCTTACTTTTTGGAATGGCAAAT 647
                 V  T  W  S  A  D  S  K  V  L  L  F  G  M  A  N  

           651 ----+----*----+----*----+----*----+----*----+----* 700
               G  E  I  H  I  Y  D  N  Q  G  N  F  I  M  K  M  K 
mfj00936   629 GGAGAAATACACATTTATGATAATCAAGGAAATTTTATAATGAAAATGAA 678
               || |||||||||||||| |||||||||||||||||||| || ||||||||
bg00080    648 GGGGAAATACACATTTACGATAATCAAGGAAATTTTATGATAAAAATGAA 697
               G  E  I  H  I  Y  D  N  Q  G  N  F  M  I  K  M  K 

           701 ----+----*----+----*----+----*----+----*----+----* 750
                L  N  C  L  V  N  V  T  G  A  I  S  I  A  G  I  H
mfj00936   679 GCTGAATTGCTTGGTGAACGTCACTGGAGCGATCAGTATCGCTGGGATTC 728
                |||| ||| |||||||| ||||||||||| ||||| || ||||| ||||
bg00080    698 ACTGAGTTGTTTGGTGAATGTCACTGGAGCTATCAGCATTGCTGGAATTC 747
                L  S  C  L  V  N  V  T  G  A  I  S  I  A  G  I  H

           751 ----+----*----+----*----+----*----+----*----+----* 800
                 W  Y  H  G  T  E  G  Y  V  E  P  D  C  P  C  L  
mfj00936   729 ACTGGTACCATGGCACCGAAGGCTACGTGGAGCCCGATTGCCCTTGCCTG 778
               | |||||||||||||| ||||||||||||||||| |||||||||||||| 
bg00080    748 ATTGGTACCATGGCACAGAAGGCTACGTGGAGCCTGATTGCCCTTGCCTT 797
                 W  Y  H  G  T  E  G  Y  V  E  P  D  C  P  C  L  

           801 ----+----*----+----*----+----*----+----*----+----* 850
               A  I  C  F  D  N  G  R  C  Q  I  M  R  H  E  N  D 
mfj00936   779 GCAATTTGCTTTGACAATGGGAGATGCCAAATAATGCGGCATGAGAATGA 828
               ||  |||||||||| ||||| ||||||||||||||| | |||||||||||
bg00080    798 GCTGTTTGCTTTGATAATGGAAGATGCCAAATAATGAGACATGAGAATGA 847
               A  V  C  F  D  N  G  R  C  Q  I  M  R  H  E  N  D 

           851 ----+----*----+----*----+----*----+----*----+----* 900
                Q  N  P  V  L  I  D  T  G  M  Y  V  V  G  I  Q  W
mfj00936   829 CCAAAACCCGGTTTTGATCGACACGGGCATGTATGTGGTAGGCATCCAGT 878
               |||||| || |||||||| ||||| |||||||| || |||||||||||||
bg00080    848 CCAAAATCCCGTTTTGATTGACACTGGCATGTACGTAGTAGGCATCCAGT 897
                Q  N  P  V  L  I  D  T  G  M  Y  V  V  G  I  Q  W

           901 ----+----*----+----*----+----*----+----*----+----* 950
                 N  H  I  G  S  V  L  A  V  A  G  S  Q  K  V  V  
mfj00936   879 GGAACCACATCGGCAGTGTGTTAGCTGTGGCCGGCTCCCAGAAGGTAGTC 928
               |||||||||| ||||| |||||||||||||| |||| |||||||| || |
bg00080    898 GGAACCACATGGGCAGCGTGTTAGCTGTGGCAGGCTTCCAGAAGGCAGCC 947
                 N  H  M  G  S  V  L  A  V  A  G  F  Q  K  A  A  

           951 ----+----*----+----*----+----*----+----*----+----* 1000
               T  Q  D  K  D  I  N  I  V  Q  F  Y  T  P  F  G  E 
mfj00936   929 ACTCAGGACAAGGACATCAACATCGTGCAGTTCTACACACCGTTCGGTGA 978
               |  |||||||| ||  | ||||| |||||||| ||||| ||||| |||||
bg00080    948 ATGCAGGACAAAGATGTGAACATTGTGCAGTTTTACACTCCGTTTGGTGA 997
               M  Q  D  K  D  V  N  I  V  Q  F  Y  T  P  F  G  E 

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
                H  L  G  T  L  K  V  P  G  K  Q  M  C  S  L  S  W
mfj00936   979 GCATCTGGGTACTTTGAAAGTTCCAGGAAAGCAGATGTGTTCGCTGTCTT 1028
               |||||||||||||||||||||||| |||||| | || | | | || ||||
bg00080    998 GCATCTGGGTACTTTGAAAGTTCCTGGAAAGGAAATATCTGCACTATCTT 1047
                H  L  G  T  L  K  V  P  G  K  E  I  S  A  L  S  W

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
                 E  G  G  G  L  K  I  A  L  A  V  D  S  F  I  Y  
mfj00936  1029 GGGAAGGAGGCGGACTGAAGATTGCTCTAGCTGTTGACTCCTTTATATAT 1078
               |||||||||| |||||||| ||||| ||||||||||| ||||||||||||
bg00080   1048 GGGAAGGAGGTGGACTGAAAATTGCACTAGCTGTTGATTCCTTTATATAT 1097
                 E  G  G  G  L  K  I  A  L  A  V  D  S  F  I  Y  

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
               F  A  N  I  R  P  D  Y  K  W  G  Y  C  S  N  T  V 
mfj00936  1079 TTTGCAAATATTCGACCTGATTATAAGTGGGGCTACTGTTCCAACACAGT 1128
               |||||||| ||||||||| ||||||||||||| || || || ||||| ||
bg00080   1098 TTTGCAAACATTCGACCTAATTATAAGTGGGGTTATTGCTCAAACACTGT 1147
               F  A  N  I  R  P  N  Y  K  W  G  Y  C  S  N  T  V 

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
                V  Y  A  Y  T  R  P  D  R  P  E  Y  C  V  V  F  W
mfj00936  1129 GGTTTATGCGTACACCAGACCCGATCGTCCCGAATACTGTGTTGTGTTCT 1178
                |||||||| || |||||||| |||||||| ||||| |||||||| ||||
bg00080   1148 AGTTTATGCATATACCAGACCTGATCGTCCAGAATATTGTGTTGTCTTCT 1197
                V  Y  A  Y  T  R  P  D  R  P  E  Y  C  V  V  F  W

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
                 D  T  K  N  S  E  K  Y  V  K  Y  V  K  S  L  I  
mfj00936  1179 GGGACACAAAAAACAGTGAGAAATACGTTAAATATGTGAAGAGCCTCATT 1228
               |||| || ||||||| ||| ||||| ||||||||||||||| | ||||||
bg00080   1198 GGGATACGAAAAACAATGAAAAATATGTTAAATATGTGAAGGGTCTCATT 1247
                 D  T  K  N  N  E  K  Y  V  K  Y  V  K  G  L  I  

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
               S  I  T  T  C  G  D  F  C  I  L  A  T  K  A  D  E 
mfj00936  1229 TCTATCACCACGTGTGGAGATTTCTGCATTTTGGCTACAAAAGCTGATGA 1278
               ||||| || || ||||||||||||||||||||||||||||||||||||||
bg00080   1248 TCTATTACTACCTGTGGAGATTTCTGCATTTTGGCTACAAAAGCTGATGA 1297
               S  I  T  T  C  G  D  F  C  I  L  A  T  K  A  D  E 

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
                N  H  P  Q  E  E  N  E  M  E  T  F  G  A  T  F  V
mfj00936  1279 GAATCACCCTCAGGAGGAGAATGAAATGGAGACATTTGGTGCAACGTTTG 1328
                ||||| |||||||||||||| || |||||||||||||||||||||||||
bg00080   1298 AAATCATCCTCAGGAGGAGAACGAGATGGAGACATTTGGTGCAACGTTTG 1347
                N  H  P  Q  E  E  N  E  M  E  T  F  G  A  T  F  V

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
                 L  V  L  C  N  S  I  G  T  P  L  D  P  K  Y  I  
mfj00936  1329 TGCTTGTCCTTTGCAATTCTATTGGCACACCCTTGGACCCTAAATACATT 1378
               | || || ||||| ||||||||||| ||||||||||| || |||||||||
bg00080   1348 TACTAGTTCTTTGTAATTCTATTGGTACACCCTTGGATCCCAAATACATT 1397
                 L  V  L  C  N  S  I  G  T  P  L  D  P  K  Y  I  

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
               D  L  V  P  L  F  V  A  M  T  K  T  H  V  I  A  A 
mfj00936  1379 GATCTTGTACCATTATTTGTTGCAATGACCAAAACCCATGTGATAGCAGC 1428
               ||| |||||||||| |||||||||||||||||||||||||||||||||||
bg00080   1398 GATATTGTACCATTGTTTGTTGCAATGACCAAAACCCATGTGATAGCAGC 1447
               D  I  V  P  L  F  V  A  M  T  K  T  H  V  I  A  A 

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
                S  K  E  A  F  Y  T  W  Q  Y  R  V  A  K  K  L  T
mfj00936  1429 TTCAAAAGAAGCATTTTATACCTGGCAATATCGTGTGGCAAAGAAGCTCA 1478
                || ||||||||||||||||||||||||||||||||||||||||||||||
bg00080   1448 CTCGAAAGAAGCATTTTATACCTGGCAATATCGTGTGGCAAAGAAGCTCA 1497
                S  K  E  A  F  Y  T  W  Q  Y  R  V  A  K  K  L  T

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
                 A  L  E  I  N  Q  I  T  R  S  R  K  E  G  R  E  
mfj00936  1479 CAGCACTGGAAATTAATCAGATCACACGGTCTCGAAAAGAAGGAAGAGAA 1528
               ||||| ||||||||||||||||||||||||||||||||||||| ||||||
bg00080   1498 CAGCATTGGAAATTAATCAGATCACACGGTCTCGAAAAGAAGGGAGAGAA 1547
                 A  L  E  I  N  Q  I  T  R  S  R  K  E  G  R  E  

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
               R  I  Y  H  V  D  D  V  P  S  G  S  V  D  G  V  F 
mfj00936  1529 AGAATTTATCACGTTGATGATGTCCCTTCCGGATCTGTGGATGGGGTGTT 1578
               ||||||||||| |||||||||  |||||| |||||  ||||||| ||| |
bg00080   1548 AGAATTTATCATGTTGATGATACCCCTTCTGGATCAATGGATGGTGTGCT 1597
               R  I  Y  H  V  D  D  T  P  S  G  S  M  D  G  V  L 

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
                D  Y  S  K  A  I  Q  G  T  R  D  P  I  C  A  I  T
mfj00936  1579 TGATTACAGTAAAGCCATTCAAGGTACAAGGGATCCAATTTGTGCCATTA 1628
               |||||| |||||| |||||||||| ||||||||||||||||||||||| |
bg00080   1598 TGATTATAGTAAAACCATTCAAGGCACAAGGGATCCAATTTGTGCCATAA 1647
                D  Y  S  K  T  I  Q  G  T  R  D  P  I  C  A  I  T

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
                 A  S  D  K  T  L  I  V  G  R  E  S  G  V  I  Q  
mfj00936  1629 CTGCATCTGATAAGACATTGATTGTGGGGCGTGAATCTGGCGTCATTCAG 1678
               ||||||| ||||||| |||||||||||| ||||||||||||  |||||||
bg00080   1648 CTGCATCAGATAAGATATTGATTGTGGGTCGTGAATCTGGCACCATTCAG 1697
                 A  S  D  K  I  L  I  V  G  R  E  S  G  T  I  Q  

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
               R  Y  S  F  P  N  V  A  L  I  Q  K  Y  S  L  D  C 
mfj00936  1679 AGGTACAGCTTTCCTAATGTTGCTCTGATTCAAAAGTATTCCCTGGATTG 1728
               || |||||  | |||||||||| | |||||||||| ||||||||  ||||
bg00080   1698 AGATACAGTCTACCTAATGTTGGTTTGATTCAAAAATATTCCCTTAATTG 1747
               R  Y  S  L  P  N  V  G  L  I  Q  K  Y  S  L  N  C 

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
                R  A  C  Q  L  S  L  N  C  N  S  S  R  L  A  I  I
mfj00936  1729 CCGTGCCTGCCAGTTATCTCTGAACTGCAACTCCAGTCGTCTTGCTATCA 1778
                || |||| |||||||||  |||| |||||||| || |||||||||||||
bg00080   1748 TCGAGCCTACCAGTTATCCTTGAATTGCAACTCTAGCCGTCTTGCTATCA 1797
                R  A  Y  Q  L  S  L  N  C  N  S  S  R  L  A  I  I

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
                 D  I  A  G  V  L  T  F  F  D  L  D  T  R  V  T  
mfj00936  1779 TCGACATCGCTGGAGTCTTGACTTTCTTTGACTTGGACACTCGGGTGACC 1828
               | |||||| | |||||  |||||||||||||||||||  |||| || || 
bg00080   1798 TAGACATCTCAGGAGTTCTGACTTTCTTTGACTTGGATGCTCGAGTAACG 1847
                 D  I  S  G  V  L  T  F  F  D  L  D  A  R  V  T  

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
               D  S  T  G  Q  Q  V  V  G  E  L  L  K  L  E  R  K 
mfj00936  1829 GACAGTACAGGGCAGCAGGTCGTTGGCGAGTTGCTAAAACTGGAGCGCAA 1878
               |||||||| || ||||| || ||||| |||||| ||||| |||| || | 
bg00080   1848 GACAGTACGGGACAGCAAGTAGTTGGAGAGTTGTTAAAATTGGAACGAAG 1897
               D  S  T  G  Q  Q  V  V  G  E  L  L  K  L  E  R  R 

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
                D  V  W  D  M  K  W  A  K  D  N  P  D  L  F  A  M
mfj00936  1879 AGACGTCTGGGATATGAAGTGGGCCAAGGACAATCCTGATTTGTTTGCAA 1928
               ||| ||||||||||||||||||||||| || |||||||||||||||||||
bg00080   1898 AGATGTCTGGGATATGAAGTGGGCCAAAGATAATCCTGATTTGTTTGCAA 1947
                D  V  W  D  M  K  W  A  K  D  N  P  D  L  F  A  M

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
                 M  E  K  T  R  M  Y  V  F  R  N  L  D  P  E  E  
mfj00936  1929 TGATGGAGAAGACGAGAATGTATGTTTTCAGAAACTTGGATCCTGAGGAA 1978
               ||||||||||||| ||||||||||||||||||||||||||||||||||||
bg00080   1948 TGATGGAGAAGACAAGAATGTATGTTTTCAGAAACTTGGATCCTGAGGAA 1997
                 M  E  K  T  R  M  Y  V  F  R  N  L  D  P  E  E  

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
               P  I  Q  T  S  G  Y  I  C  N  F  E  D  L  E  I  K 
mfj00936  1979 CCCATTCAGACCTCTGGATATATTTGCAACTTTGAGGATTTGGAAATTAA 2028
               |||||||||||||||||||||||||| || ||||||||||| ||||||||
bg00080   1998 CCCATTCAGACCTCTGGATATATTTGTAATTTTGAGGATTTAGAAATTAA 2047
               P  I  Q  T  S  G  Y  I  C  N  F  E  D  L  E  I  K 

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
                S  V  L  L  D  E  I  L  K  D  P  E  H  P  S  K  D
mfj00936  2029 GTCTGTTCTCTTGGATGAGATACTGAAGGACCCAGAGCACCCTAGCAAGG 2078
                |||||||| |||||||||||| | ||||| ||||| || || | |||||
bg00080   2048 ATCTGTTCTTTTGGATGAGATATTAAAGGATCCAGAACATCCAAACAAGG 2097
                S  V  L  L  D  E  I  L  K  D  P  E  H  P  N  K  D

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
                 Y  I  M  N  F  E  I  R  S  L  R  D  S  R  A  L  
mfj00936  2079 ATTACATAATGAACTTTGAGATCCGGTCCCTGCGAGACAGCCGAGCATTG 2128
               ||||| |||| ||||||||||| ||||| |||||||| ||||||||| ||
bg00080   2098 ATTACCTAATTAACTTTGAGATTCGGTCTCTGCGAGATAGCCGAGCACTG 2147
                 Y  L  I  N  F  E  I  R  S  L  R  D  S  R  A  L  

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
               I  E  K  V  G  I  E  D  A  S  Q  F  I  E  D  N  P 
mfj00936  2129 ATTGAGAAAGTTGGAATTGAAGATGCGTCTCAGTTCATAGAGGACAACCC 2178
               |||||||| ||||||||| ||||||| |||||||||||||||||||| ||
bg00080   2148 ATTGAGAAGGTTGGAATTAAAGATGCATCTCAGTTCATAGAGGACAATCC 2197
               I  E  K  V  G  I  K  D  A  S  Q  F  I  E  D  N  P 

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
                H  P  R  L  W  R  L  L  A  E  A  A  L  Q  K  L  D
mfj00936  2179 ACACCCCCGACTTTGGCGCCTGCTGGCTGAAGCTGCTCTCCAGAAGCTGG 2228
               ||||||||||||||||||||| ||||||||||| ||||| ||||| ||||
bg00080   2198 ACACCCCCGACTTTGGCGCCTACTGGCTGAAGCAGCTCTTCAGAAACTGG 2247
                H  P  R  L  W  R  L  L  A  E  A  A  L  Q  K  L  D

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
                 L  Y  T  A  Q  Q  A  F  V  R  C  K  D  Y  Q  G  
mfj00936  2229 ACCTGTACACCGCACAGCAAGCGTTTGTGCGCTGCAAGGATTACCAAGGC 2278
               | || ||||| ||| ||||||| |||||||||||||| ||||||||||||
bg00080   2248 ATCTATACACTGCAGAGCAAGCATTTGTGCGCTGCAAAGATTACCAAGGC 2297
                 L  Y  T  A  E  Q  A  F  V  R  C  K  D  Y  Q  G  

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
               I  K  F  V  K  L  L  G  N  L  Q  S  E  S  M  K  Q 
mfj00936  2279 ATCAAGTTTGTGAAGCTCCTGGGCAATCTGCAGAGCGAGTCAATGAAGCA 2328
               || ||||||||||||| | ||||||| || | ||| ||||||||||| ||
bg00080   2298 ATTAAGTTTGTGAAGCGCTTGGGCAAACTACTGAGTGAGTCAATGAAACA 2347
               I  K  F  V  K  R  L  G  K  L  L  S  E  S  M  K  Q 

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
                A  E  V  I  A  Y  F  G  R  F  E  D  A  E  R  M  Y
mfj00936  2329 GGCTGAAGTTATTGCCTACTTTGGCAGGTTCGAAGATGCCGAAAGGATGT 2378
               |||||||||| ||| |||||| |||||||| ||||| || ||||| | ||
bg00080   2348 GGCTGAAGTTGTTGGCTACTTCGGCAGGTTTGAAGAGGCTGAAAGAACGT 2397
                A  E  V  V  G  Y  F  G  R  F  E  E  A  E  R  T  Y

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
                 Q  D  M  D  R  R  D  L  A  I  G  L  R  M  K  L  
mfj00936  2379 ATCAAGATATGGACAGACGGGACCTCGCTATTGGTCTCAGAATGAAATTG 2428
               |||  || ||||||||| |||| || |||||||| ||| |  ||||||||
bg00080   2398 ATCTCGAGATGGACAGAAGGGATCTTGCTATTGGCCTCCGGCTGAAATTG 2447
                 L  E  M  D  R  R  D  L  A  I  G  L  R  L  K  L  

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
               G  D  W  F  R  V  L  Q  L  L  K  T  G  S  G  D  A 
mfj00936  2429 GGGGACTGGTTCAGAGTACTGCAGCTCCTGAAAACTGGATCTGGTGATGC 2478
               ||||| ||||| |||||||| |||||||||||||||||||||||||||||
bg00080   2448 GGGGATTGGTTTAGAGTACTCCAGCTCCTGAAAACTGGATCTGGTGATGC 2497
               G  D  W  F  R  V  L  Q  L  L  K  T  G  S  G  D  A 

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
                D  D  S  L  L  E  Q  A  N  N  A  I  G  E  Y  F  A
mfj00936  2479 AGACGACAGTCTCCTTGAACAAGCTAACAATGCCATTGGAGAGTACTTTG 2528
               ||| ||||||||||| |||||||| ||||||||||||||||| |||||||
bg00080   2498 AGATGACAGTCTCCTGGAACAAGCCAACAATGCCATTGGAGACTACTTTG 2547
                D  D  S  L  L  E  Q  A  N  N  A  I  G  D  Y  F  A

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
                 D  R  Q  K  W  Q  N  A  V  Q  Y  Y  V  K  G  R  
mfj00936  2529 CTGACCGACAGAAGTGGCAGAATGCTGTGCAATATTATGTAAAAGGCAGG 2578
               |||| ||||| ||||||  ||||||||| |||||||||||| ||||  ||
bg00080   2548 CTGATCGACAAAAGTGGTTGAATGCTGTACAATATTATGTACAAGGACGG 2597
                 D  R  Q  K  W  L  N  A  V  Q  Y  Y  V  Q  G  R  

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
               N  Q  E  R  L  A  E  C  Y  Y  M  L  E  D  Y  E  G 
mfj00936  2579 AACCAGGAGCGCCTGGCCGAATGCTATTATATGCTAGAAGATTATGAGGG 2628
               |||||||| ||| | || ||||| || |||||| |||| |||||||||||
bg00080   2598 AACCAGGAACGCTTAGCTGAATGTTACTATATGTTAGAGGATTATGAGGG 2647
               N  Q  E  R  L  A  E  C  Y  Y  M  L  E  D  Y  E  G 

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
                L  E  T  L  A  N  S  L  P  E  N  H  K  L  L  P  E
mfj00936  2629 GTTAGAGACTCTTGCCAATTCACTTCCAGAAAACCATAAGTTGCTTCCAG 2678
               ||||||||  ||||||| |||||||||||||||||| ||||| |||||||
bg00080   2648 GTTAGAGAACCTTGCCATTTCACTTCCAGAAAACCACAAGTTACTTCCAG 2697
                L  E  N  L  A  I  S  L  P  E  N  H  K  L  L  P  E

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
                 I  A  Q  M  F  V  R  V  G  M  C  E  Q  A  V  S  
mfj00936  2679 AAATAGCCCAGATGTTTGTGAGAGTTGGAATGTGTGAGCAAGCTGTGAGC 2728
               ||||||| || |||||||| ||||||||||||||||| ||||| ||||  
bg00080   2698 AAATAGCACAAATGTTTGTCAGAGTTGGAATGTGTGAACAAGCAGTGACT 2747
                 I  A  Q  M  F  V  R  V  G  M  C  E  Q  A  V  T  

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
               A  F  L  K  C  N  Q  P  K  A  A  V  D  T  C  V  H 
mfj00936  2729 GCATTCTTGAAGTGTAACCAACCAAAGGCAGCGGTGGACACCTGTGTACA 2778
               ||||| ||||| ||||  |||||||||||||| || || ||||| |||||
bg00080   2748 GCATTTTTGAAATGTAGTCAACCAAAGGCAGCAGTAGATACCTGCGTACA 2797
               A  F  L  K  C  S  Q  P  K  A  A  V  D  T  C  V  H 

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
                L  N  Q                                          
mfj00936  2779 CCTGAACCAA........................................ 2788
                || ||||||                                        
bg00080   2798 TCTCAACCAATGGAACAAAGCTGTTGAATTGGCTAAAAATCATAGTATGA 2847
                L  N  Q  W  N  K  A  V  E  L  A  K  N  H  S  M  K

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
mfj00936  2789 .................................................. 2789
                                                                 
bg00080   2848 AAGAAATTGGATCTCTGTTAGCTAGGTATGCATCTCATTTACTGGAAAAG 2897
                 E  I  G  S  L  L  A  R  Y  A  S  H  L  L  E  K  

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
mfj00936  2789 .................................................. 2789
                                                                 
bg00080   2898 AATAAAACTCTTGATGCCATAGAACTCTATCGGAAAGCCAATTACTTTTT 2947
               N  K  T  L  D  A  I  E  L  Y  R  K  A  N  Y  F  F 

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
mfj00936  2789 .................................................. 2789
                                                                 
bg00080   2948 TGATGCAGCTAAACTGATGTTTAAGATTGCAGATGAAGAGGCAAAGAAAG 2997
                D  A  A  K  L  M  F  K  I  A  D  E  E  A  K  K  G

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
mfj00936  2789 .................................................. 2789
                                                                 
bg00080   2998 GAAGTAAACCTTTACGTGTCAAGAAGCTCTATGTACTGTCAGCCTTACTT 3047
                 S  K  P  L  R  V  K  K  L  Y  V  L  S  A  L  L  

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
mfj00936  2789 .................................................. 2789
                                                                 
bg00080   3048 ATAGAGCAATACCATGAACAGATGAAGAATGCCCAGCGAGGAAAAGTTAA 3097
               I  E  Q  Y  H  E  Q  M  K  N  A  Q  R  G  K  V  K 

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
mfj00936  2789 .................................................. 2789
                                                                 
bg00080   3098 AGGAAAAAGTTCAGAGGCCACTTCTGCCTTGGCTGGTTTGCTGGAAGAAG 3147
                G  K  S  S  E  A  T  S  A  L  A  G  L  L  E  E  E

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
                                                        *  G  A  
mfj00936  2789 ........................................GTGAGGAGCG 2798
                                                       | |||| || 
bg00080   3148 AAGTTCTGTCTACAACAGATCGTTTCACAGATAATGCATGGAGAGGGGCA 3197
                 V  L  S  T  T  D  R  F  T  D  N  A  W  R  G  A  

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
               D  R  R  H  -           P  P  R  D  S  *  E  D  S 
mfj00936  2799 GACAGGCGCCACCT........TGCCGCCCAGGGATTCTTAGGAGGATTC 2840
               ||      |||| |        |  | |  ||| |    || ||||  | 
bg00080   3198 GAGGCTTACCACTTCTTTATACTTGCACAGAGGCAGCTCTATGAGGGATG 3247
               E  A  Y  H  F  F  I  L  A  Q  R  Q  L  Y  E  G  C 

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
                V  R  L  G  G  E  G  A                           
mfj00936  2841 TGTGAGGCTGGGAGGGGAGGGAGCT......................... 2865
               ||||      | |  | ||  ||||                         
bg00080   3248 TGTGGACACTGCACTGAAGACAGCTCTTCACCTGAAAGACTATGAAGACA 3297
                V  D  T  A  L  K  T  A  L  H  L  K  D  Y  E  D  I

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
mfj00936  2866 .................................................. 2866
                                                                 
bg00080   3298 TCATCCCTCCTGTGGAGATCTACTCTCTGCTAGCACTCTGCGCATGCGCC 3347
                 I  P  P  V  E  I  Y  S  L  L  A  L  C  A  C  A  

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
mfj00936  2866 .................................................. 2866
                                                                 
bg00080   3348 AGCAGAGCCTTTGGGACTTGTTCAAAAGCTTTCATTAAACTTAAATCTTT 3397
               S  R  A  F  G  T  C  S  K  A  F  I  K  L  K  S  L 

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
mfj00936  2866 .................................................. 2866
                                                                 
bg00080   3398 AGAGACCCTCAGTTCAGAACAGAAACAGCAGTATGAAGACCTTGCTTTAG 3447
                E  T  L  S  S  E  Q  K  Q  Q  Y  E  D  L  A  L  E

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
                                                           *  L  
mfj00936  2866 ..........................................GCTAGCTC 2873
                                                           | |  |
bg00080   3448 AAATCTTCACCAAACATACTTCAAAAGATAACAGAAAACCTGAATTGGAC 3497
                 I  F  T  K  H  T  S  K  D  N  R  K  P  E  L  D  

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
               M  A  I  L  R  G  G  P  K  G                      
mfj00936  2874 ATGGCTATTCTACGTGGAGGACCGAAAGGG.................... 2903
               |    |||   | |||||| |  ||||  |                    
bg00080   3498 AGCCTTATGGAAGGTGGAGAAGGGAAACTGCCAACATGCGTTGCCACAGG 3547
               S  L  M  E  G  G  E  G  K  L  P  T  C  V  A  T  G 

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
mfj00936  2904 .................................................. 2904
                                                                 
bg00080   3548 AAGCCCAATCACTGAGTATCAATTCTGGATGTGCAGTGTATGCAAACACG 3597
                S  P  I  T  E  Y  Q  F  W  M  C  S  V  C  K  H  G

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
                                                  W  P  L  H  L  
mfj00936  2904 ...................................TGGCCTTTGCACTTA 2918
                                                  || || ||   |   
bg00080   3598 GTGTCCTTGCTCAGGAAATAAGCCACTACAGCTTCTGCCCCTTATGCCAT 3647
                 V  L  A  Q  E  I  S  H  Y  S  F  C  P  L  C  H  

          3651 ----+----*----+----*----+----*----+----*----+----* 3700
               T  S  G  G  T                                     
mfj00936  2919 ACCTCTGGGGGTACCATAAGGGGTGGCCTGCTCACAGCT........... 2957
               |   | | |||    |  |  | |   |||   | | ||           
bg00080   3648 AGTCCAGTGGGATAAAGGAATGATAAACTGTATATAACTGTAAAATATAT 3697
               S  P  V  G  *                                     

          3701 ----+----*----+----*----+----*----+----*----+----* 3750
mfj00936  2958 .TAGCCAACCAGAACAGATCTGTGCGTTCAAGTTTTTATGTGGAATTTCA 3006
                ||||  |     |  | | | |||  |  |  |  || |    ||||| 
bg00080   3698 GTAGCATATATACATGGCTATATGCTGTATATGTAATAAGGTTTATTTCT 3747

          3751 ----+----*----+----*----+----*----+----*----+----* 3800
mfj00936  3007 TAATTTTTTGCAT..............TTTGTTAGGGTTGGGTTTTTG.. 3040
                    ||||| ||              ||  |||  ||||  ||||||  
bg00080   3748 GTGAGTTTTGTATGAAAATCAGCCTCATTATTTATAGTTGAATTTTTGCA 3797

          3801 ----+----*----+----*----+----*----+----*----+----* 3850
mfj00936  3041 .................................................. 3041
                                                                 
bg00080   3798 CAAAATATATGTTAATAAAATAATTTTTATGGCAATACAACTGTGAAATA 3847

          3851 ----+----*----+----*----+----*----+----*----+----* 3900
mfj00936  3041 .................................................. 3041
                                                                 
bg00080   3848 ATAAGGCCGATTTTCATATAAATGTATGAAAATCAACCATGTTTTATCTC 3897

          3901 ----+----*----+----*----+----*----+----*----+----* 3950
mfj00936  3041 .................................................. 3041
                                                                 
bg00080   3898 ACCCTCTCTCTTTTGTTTATCTTGTTTTTGGTTACATGATACCATGGAAA 3947

          3951 ----+----*----+----*----+----*----+----*----+----* 4000
mfj00936  3041 ...............TTTCTCAGAAAGGGCCAGGTTAATGGCCATTCATT 3075
                              ||| ||  | || | || | |||  |  |||||||
bg00080   3948 TATTCCAAATAAATTTTTTTCTCACAGTGTCAAGGTAACTG.AATTCATT 3996

          4001 ----+----*----+----*----+----*----+----*----+----* 4050
mfj00936  3076 ......GCCTGAAGAAAGAATTGAG......................... 3094
                      | |||||  || |  |||                         
bg00080   3997 AAAAAATCTTGAAGGGAGTAGGGAGTGGGGGAAGCATGGGAGTGGGGCAA 4046

          4051 ----+----*----+----*----+----*----+----*----+----* 4100
mfj00936  3095 .................................................. 3095
                                                                 
bg00080   4047 AGTTGAATTTAGAGAATTTTTATAACCCATGTTACAAGGAAGTTAAACAA 4096

          4101 ----+----*----+----*----+----*----+----*----+----* 4150
mfj00936  3095 .....................TTACTTGATCAATATTTATTT.......T 3116
                                    |  ||  | | ||||||| ||       |
bg00080   4097 TTGTAATAATGAAATGAGCTTTCTCTATAGCCATATTTAATTAAATAAGT 4146

          4151 ----+----*----+----*----+----*----+----*----+----* 4200
mfj00936  3117 GGCAAATCTATTTCCTTTCTCTTTTATAGAAAACATGTATTTGATATTTT 3166
               | | ||| | ||   | |    |||  ||||   | | | | |   ||| 
bg00080   4147 GTCGAATGTCTTCTTTATTGTATTTTCAGAAGTGAGGCAATGGCATTTTA 4196

          4201 ----+----*----+----*----+----*----+----*----+----* 4250
mfj00936  3167 AAA............................................... 3169
               | |                                               
bg00080   4197 AGACATTTTTTACAATCTGAATTGTTTCTAATAGCCCTATTCTTCTATTT 4246

          4251 ----+----*----+----*----+----*----+----*----+----* 4300
mfj00936  3170 .AAAGCCTGAAATTTAACTAAAATCAAAGTGCAGGATTGTTACAGAAATG 3218
                ||| ||||   ||| | |   ||  ||| |  ||  | |   |   |  
bg00080   4247 TAAAACCTGTCCTTTTAGTCTCATTTAAGAGATGGCATTTGGAATTTACA 4296

          4301 ----+----*----+----*----+----*----+----*----+----* 4350
mfj00936  3219 GTTGGCTATCAGTAT.....ATTCTTCTAAGTATGTTTTTTGAAGTGTTT 3263
                ||   ||| | | |     |  |||     ||| | |  |||||     
bg00080   4297 CTTTCATATGATTGTGCAGAAAACTTGCCTCTATTTATAATGAAGATAAC 4346

          4351 ----+----*----+----*----+----*----+----*----+----* 4400
mfj00936  3264 TAAAAGATCTGTTTGCCTTATAAAGATA...................... 3291
               | ||| |    | | | || |  || ||                      
bg00080   4347 TTAAACAGAAATATCCATTTTGTAGTTATAGCTTCTGTTGAAACATTGTC 4396

          4401 ----+----*----+----*----+----*----+----*----+----* 4450
mfj00936  3292 ...................ATTTATAAATGTTATATCCGATAGGATATTT 3322
                                   |  | || | || |    |    ||| |||
bg00080   4397 ACTAAGTTGGACCGTTTATTTACACAAGTATTGTTGAGGGAGTGATTTTT 4446

          4451 ----+----*----+----*----+----*----+----*----+----* 4500
mfj00936  3323 TCTTAA.....ATATGTTTTGTTTTATGATAAAACTAAAAAACAAATTCT 3367
               |||| |      | ||||||  ||||| || ||  | ||| | |||   |
bg00080   4447 TCTTGATATGCGTCTGTTTTCATTTATTATTAATTTGAAAGATAAACAGT 4496

          4501 ----+----*----+----*----+----*----+----*----+----* 4550
mfj00936  3368 TTTTCTAGCTTA...................................... 3379
               | |  |   | |                                      
bg00080   4497 TGTGATCCATAATGGATCATTTCTTATGTCTTTTACATAGCTAATAATGT 4546

          4551 ----+----*----+----*----+----*----+----*----+----* 4600
mfj00936  3380 .................................................. 3380
                                                                 
bg00080   4547 TCTCTGTTTATTTCTCATGAATTCCCATTTTGTGGCTAAAGACCAGACCT 4596

          4601 ----+----*----+----*----+----*----+----*----+----* 4650
mfj00936  3380 .................................................. 3380
                                                                 
bg00080   4597 TTGCACTATTTCATCAAGATTATTTTATTGAGGTTTGGCTTACATATAGT 4646

          4651 ----+----*----+----*----+----*----+----*----+----* 4700
mfj00936  3380 .....CAATATGTGCAGCAAGAGAACTGTAAAATTAATGTGATTATAAAA 3424
                    |||||  |  ||  |   |||| |    ||   |  |  ||| | 
bg00080   4647 AGAGGCAATACATAGAGATACGCAACTTTGTTTTTGCAGCTACAATACAC 4696

          4701 ----+----*----+----*----+----*----+----*----+----* 4750
mfj00936  3425 TTTGAGACTTTCATTT.................................. 3440
               |||   | | |||| |                                  
bg00080   4697 TTTCTCAATCTCATATGTTTTTGTCTTGTAGAGACAGAGACAAGTTCAGC 4746

          4751 ----+----*----+----*----+----*----+----*----+----* 4800
mfj00936  3441 .................................................. 3441
                                                                 
bg00080   4747 ATGTTGCAGATTGGGAATAGTGAGCTATGAGAAGAGATTTAGAGCCTAGA 4796

          4801 ----+----*----+----*----+----*----+----*----+----* 4850
mfj00936  3441 .................................................. 3441
                                                                 
bg00080   4797 TGAGCTTAGGATAGAGAGTGGGCTCATTGGCCTAAATAAAAAGAGAAGAC 4846

          4851 ----+----*----+----*----+----*----+----*----+----* 4900
mfj00936  3441 .................................................. 3441
                                                                 
bg00080   4847 CAGAAGTCTTTGAGGTCTCTGTCTCTATTCATGCGCCTCGTGGAAAATTA 4896

          4901 ----+----*----+----*----+----*----+----*----+----* 4950
mfj00936  3441 .................................................. 3441
                                                                 
bg00080   4897 CCTTGGTACAATGGTAGCCTCTAAATAGACTGCCTCGCAAGCTATTCCAG 4946

          4951 ----+----*----+----*----+----*----+----*----+----* 5000
mfj00936  3441 .............TCAAATGTACTTATCCAAGAAATACCTCTGAAATTAT 3477
                              ||   |  | | ||||  || |  ||| ||| || 
bg00080   4947 AGGTCATGGAACAGAAAGCCTTATAAACCAAATAAAAATTCTCAAAATAC 4996

          5001 ----+----*----+----*----+----*----+----*----+----* 5050
mfj00936  3478 GTAGTCACTTTGA..................................... 3490
                | |     ||||                                     
bg00080   4997 ATTGGTTTATTGAACCAATTTGCAATACACAGTGAGGAACAAGGAGAAAG 5046

          5051 ----+----*----+----*----+----*----+----*----+----* 5100
mfj00936  3491 .................................................. 3491
                                                                 
bg00080   5047 CAATGATAGATTAACACTGTTAGTGTAACGTGCCAGTGGAGTGGAAAGAC 5096

          5101 ----+----*----+----*----+----*----+----*----+----* 5150
mfj00936  3491 ...........AATGCTTGCCTGTAAAATGCTTGACTGCTCTGA...... 3523
                          ||| || |  | |  |||| ||   ||  ||||      
bg00080   5097 CGCAACACCTGAATCCTGGGTTTTGTAATGTTTTTATGTCCTGACTCACA 5146

          5151 ----+----*----+----*----+----*----+----*----+----* 5200
mfj00936  3524 .................................TTTCAAAGACGCTTAGA 3540
                                                || |||| | |   |||
bg00080   5147 TTCTGTCACATACGCTTTCCCCTAATAGTCGGGTTACAAAAAGGACCAGA 5196

          5201 ----+----*----+----*----+----*----+----*----+----* 5250
mfj00936  3541 GTGTCGACT......................................... 3549
               ||| |  ||                                         
bg00080   5197 GTGGCCGCTTGAGCCAGATGACTCAATCAGATGAAATGTGCCTGAGGCCA 5246

          5251 ----+----*----+----*----+----*----+----*----+----* 5300
mfj00936  3550 ........GCTTTGCTATATTGGAAGTAGT........GTTACCATTTAT 3583
                          ||||| ||| | | |  ||          |||  || | 
bg00080   5247 ACGATGTACACTTGCTCTATAGAAGGGTGTCAGGGGCAAGTACACTTCAC 5296

          5301 ----+----*----+----*----+----*----+----*----+----* 5350
mfj00936  3584 TACACACTTAGGTTGCATTGT............................. 3604
                |||    ||| |||| |  |                             
bg00080   5297 CACAGCAATAGCTTGCCTATTAGTCTGCTGAGCAGTCATGAATTTTATTG 5346

          5351 ----+----*----+----*----+----*----+----*----+----* 5400
mfj00936  3605 .................................................. 3605
                                                                 
bg00080   5347 TATTTCTTGGGTAAGGACAGGCCAGAATGAGTGTCACCAGTGGGTAATTG 5396

          5401 ----+----*----+----*----+----*----+----*----+----* 5450
mfj00936  3605 ..............................................CAGG 3608
                                                             |   
bg00080   5397 AATCAACTTCTCACACATACTGAAGGCTTTATATGTCTCATGCATACTTA 5446

          5451 ----+----*----+----*----+----*----+----*----+----* 5500
mfj00936  3609 ATGTAGTATGTAAGTTATTTAAATATTCGGGTGACTGAATTTATATTGCT 3658
                ||||  ||| |  ||   ||  | |  || |      |||| || ||||
bg00080   5447 GTGTATCATGAATATTTGGTATCTTTGTGGCTTTTCATATTTTTAGTGCT 5496

          5501 ----+----*----+----*----+----*----+----*----+----* 5550
mfj00936  3659 T................................................. 3659
               |                                                 
bg00080   5497 TCATGAATATTTGGTATCTCTTGCTCCTTTCTATCTGTGGTCACACATAC 5546

          5551 ----+----*----+----*----+----*----+----*----+----* 5600
mfj00936  3660 .................................................. 3660
                                                                 
bg00080   5547 ACGCTCTATTAACTTTGCCTAATAAGTCTCCTAGGTTACTAACTTACTTA 5596

          5601 ----+----*----+----*----+----*----+----*----+----* 5650
mfj00936  3660 .................................................. 3660
                                                                 
bg00080   5597 CCTAAATGTAACACAATGAATTCCAGCTTTCTCATTTGTTCTATACCAGA 5646

          5651 ----+----*----+----*----+----*----+----*----+----* 5700
mfj00936  3660 .........................TTCCTAGTGGAACAAAGCCGTCGAA 3684
                                         ||  |    |||||||  |||   
bg00080   5647 ATGGGAAATTTCCCCAAATCAGAAAATCACATCCTAACAAAGAAGTCTGT 5696

          5701 ----+----*----+----*----+----*----+----*----+----* 5750
mfj00936  3685 CT................................................ 3686
               ||                                                
bg00080   5697 CTAAGACAGTACATCTCCTGTTGAACTTGCATCTTTCCACAGGACTTTCT 5746

          5751 ----+----*----+----*----+----*----+----*----+----* 5800
mfj00936  3687 .................................................. 3687
                                                                 
bg00080   5747 GTTTTTAGGGATGAGACTATTCTCTGCTTCATCAAGGAAAGAGAAATGTT 5796

          5801 ----+----*----+----*----+----*----+----*----+----* 5850
mfj00936  3687 .................................................. 3687
                                                                 
bg00080   5797 CAGGGTTGTAGGGATGGCACACTTATTAGTTCTGCCTGTCTGAAAGGTTC 5846

          5851 ----+----*----+----*----+----*----+----*----+----* 5900
mfj00936  3687 ....................GGCTAAAAGTCATAGTATGAAGGAGATTGG 3716
                                    |||  || || ||||     |   | || 
bg00080   5847 CTGCAGGACAGTTTGGTCAGAGCTGCAATTCTTAGTCCATGGTCTAATGC 5896

          5901 ----+----*----+----*----+----*----+----*----+----* 5950
mfj00936  3717 ATCTCTGTTAGCTAGGTACGCGTCCCAT...................... 3744
                |   | |    |   | |   |||  |                      
bg00080   5897 TTGAGTATCTCTTCTTTCCCTTTCCTGTCTCAGGAATCAGCTGAGAATTC 5946

          5951 ----+----*----+----*----+----*----+----*----+----* 6000
mfj00936  3745 .................................................. 3745
                                                                 
bg00080   5947 ATTCGATTGTCATGCCTCTAGCCCCTTACTGTGATTTGTTGGTTGCACTT 5996

          6001 ----+----*----+----*----+----*----+----*----+----* 6050
mfj00936  3745 .................................................. 3745
                                                                 
bg00080   5997 TCATTTGCTTTAGTTCTAGAATCACCTGTTGACTCCTCAGACTTCACCTA 6046

          6051 ----+----*----+----*----+----*----+----*----+----* 6100
mfj00936  3745 .................................................. 3745
                                                                 
bg00080   6047 ACTTTGGAAACTCTCTTTTGGAGGCTTCTCATTTCCCCCTAATTCTGTGC 6096

          6101 ----+----*----+----*----+----*----+----*----+----* 6150
mfj00936  3745 ...................................TTACTGGAGAAGAAC 3759
                                                  || | ||   |    
bg00080   6097 TGCCTGAGCCCTAGAATTTTCCCACCAACGAATTATTCCAGGTAGATCCT 6146

          6151 ----+----*----+----*----+----*----+----*----+----* 6200
mfj00936  3760 AAGACTCTCGATGCCATTGAACTCTATAGGAAAGCCAGCT.ACTTTTTTG 3808
               |||   || |||    ||||  | || |  | | | || | |  ||| | 
bg00080   6147 AAGTTGCTGGATCTAGTTGATATTTAAACAATATCTAGTTGATATTTCTC 6196

          6201 ----+----*----+----*----+----*----+----*----+----* 6250
mfj00936  3809 ATGCAG............................................ 3814
               || |||                                            
bg00080   6197 ATTCAGTTGGATCCAGAAACCAGTATCTCTAAAAACAACCTCTCATACCT 6246

          6251 ----+----*----+----*----+----*----+----*----+----* 6300
mfj00936  3815 .................................................. 3815
                                                                 
bg00080   6247 TGTGGACCTAATTTTGTGTGCGTGTGTGTGTGCGCGCATATGTATATAGA 6296

          6301 ----+----*----+----*----+----*----+----*----+----* 6350
mfj00936  3815 ............CTAAACTGATGTATAAGGTAATGC.............. 3838
                            |  |||  |||| ||| | ||||              
bg00080   6297 CAGGCACATCTTTTTTACTTTTGTAAAAGCTTATGCCTCTTTGGTATCTA 6346

          6351 ----+----*----+----*----+----*----+----*----+----* 6400
mfj00936  3839 .................................................. 3839
                                                                 
bg00080   6347 TATCTGTGAAAGTTTTAATGATCTGCCATAATGTCTTGGGGACCTTTGTC 6396

          6401 ----+----*----+----*----+----*----+----*----+----* 6450
mfj00936  3839 .................................................. 3839
                                                                 
bg00080   6397 TTCTGTGTAAATGGTACTAGAGAAAACACCTATATTATGAGTCAATCTAG 6446

          6451 ----+----*----+----*----+----*----+----*----+----* 6500
mfj00936  3839 .................................................. 3839
                                                                 
bg00080   6447 TTGGTTTTATTCGACATGAAGGAAATTTCCAGATAACAACACTAACAAAC 6496

          6501 ----+----*----+----*----+----*----+----*----+----* 6550
mfj00936  3839 .................................................. 3839
                                                                 
bg00080   6497 TCTCCCTTGACTAGGGGGACAAAGAAAAGCAAAACTGACCATAAAAAACA 6546

          6551 ----+----*----+----*----+----*----+----*----+----* 6600
mfj00936  3839 ................................................AC 3840
                                                               ||
bg00080   6547 ATTACCTGGTGAGAAGTTGCATAAACAGAATTAGGTAGTATATTGAAGAC 6596

          6601 ----+----*----+----*----+----*----+----*----+----* 6650
mfj00936  3841 AGTCCTGCTAAAGATTTGCTTTGCTCTAGTTACA................ 3874
               ||      |||| | ||   ||| |||  || ||                
bg00080   6597 AGCATCATTAAACAGTTATGTTGTTCTCCTTGCAAAAAACATGTACTGAC 6646

          6651 ----+----*----+----*----+----*----+----*----+----* 6700
mfj00936  3875 .................................................. 3875
                                                                 
bg00080   6647 TTCCCGTTGAGTAATGCCAAGTTGTTTTTTTTATTATAAAACTTGCCCTT 6696

          6701 ----+----*----+----*----+----*----+----*----+----* 6750
mfj00936  3875 .................................................. 3875
                                                                 
bg00080   6697 CATTACATGTTTCAAAGTGGTGTGGTGGGCCAAAATATTGAAATGATGGA 6746

          6751 ----+----*----+----*----+----*----+----*----+----* 6800
mfj00936  3875 .................................................. 3875
                                                                 
bg00080   6747 ACTGACTGATAAAGCTGTACAAATAAGCAGTGTGCCTAACAAGCAACACA 6796

          6801 ----+----*----+----*----+----*----+----*----+----* 6850
mfj00936  3875 .................................................. 3875
                                                                 
bg00080   6797 GTAATGTTGACATGCTTAATTCACAAATGCTAATTTCATTATAAATTGTT 6846

          6851 ----+----*----+----*----+----*----+----*----+----* 6900
mfj00936  3875 ..............................................GCTT 3878
                                                                |
bg00080   6847 TTGCTAAAATACACTTTGAAACTATTTTTCTGTATTCCAAGAGCTGAGAT 6896

          6901 ----+----*----+----*----+----*----+----*----+----* 6950
mfj00936  3879 TTTAAACTTTAAGCTTTATTACTTAAAAACTTGCAAATAAAATAAACATC 3928
                ||| | |||| |   |||||  | ||||  | | || | ||||||||| 
bg00080   6897 CTTAGATTTTATGTAGTATTAAGTGAAAAAATACGAAAATAATAAACATT 6946

          6951 ----+----*--- 6963
mfj00936  3929 ACATACCAAAATT 3941
                 |          
bg00080   6947 GAAG......... 6950