Comparison of KIAA cDNA sequences between mouse and human (FLJ00041)
<<Original sequence data>>
mouse mFLJ00041 (mfj00880) length: 4759 bp, CDS: 1 - 1014
human (as00041) length: 4689 bp, CDS: 3 - 995
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 4 - 5 2 0 0.0
CDS: 6 - 1023 780 209 21.1
3'UTR: 1024 - 5266 1972 1303 39.8
amino acid
CDS: 6 - 1023 251 80 24.2
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
G G V P L A P A L Q
mfj00880 1 CAGCCGGCTCCCTGGGCTCCTGGAGTCCCGCTTGCTCCAAGCGCACTCCA 50
||||| | ||||||| ||||| | | |||
as00041 1 ...CCGGC.............CGCGTCCCGCCCGCTCC...CCGGCACCA 31
G R V P P A P R H Q
51 ----+----*----+----*----+----*----+----*----+----* 100
Q S L S A L D G D M G V P A
mfj00880 51 GCAGTCTCTTTCTGCTCTTGCCCGGCTCGACGGCGACATGGGTGTCCCCG 100
| ||| || | || | ||||||||||||||| ||||||
as00041 32 GAAGTTCCTCTGCGC.........GTCCGACGGCGACATGGGCGTCCCCA 72
K F L C A S D G D M G V P T
101 ----+----*----+----*----+----*----+----*----+----* 150
V P E A S S P R W G T L L L A I
mfj00880 101 CGGTCCCAGAGGCCAGCAGCCCGCGCTGGGGAACCCTGCTCCTTGCTATT 150
||| || |||||| ||||| |||||||||| |||||||| | ||| |
as00041 73 CGGCCCTGGAGGCCGGCAGCTGGCGCTGGGGATCCCTGCTCTTCGCTCTC 122
A L E A G S W R W G S L L F A L
151 ----+----*----+----*----+----*----+----*----+----* 200
F L A A S R G L V A A F K V T T P
mfj00880 151 TTCCTGGCTGCATCCAGAGGTCTGGTAGCAGCCTTCAAGGTCACCACTCC 200
||||||||||| ||| ||||| ||| ||||||||||||||| |||| ||
as00041 123 TTCCTGGCTGCGTCCCTAGGTCCGGTGGCAGCCTTCAAGGTCGCCACGCC 172
F L A A S L G P V A A F K V A T P
201 ----+----*----+----*----+----*----+----*----+----* 250
Y S L Y V C P E G Q N A T L T C R
mfj00880 201 ATATTCTCTCTATGTGTGTCCCGAGGGACAGAATGCCACCCTCACCTGCA 250
||||| || ||||| ||||||||||| ||||| | ||||||||||||||
as00041 173 GTATTCCCTGTATGTCTGTCCCGAGGGGCAGAACGTCACCCTCACCTGCA 222
Y S L Y V C P E G Q N V T L T C R
251 ----+----*----+----*----+----*----+----*----+----* 300
I L G P V S K G H D V T I Y K T
mfj00880 251 GGATTCTGGGCCCCGTGTCCAAAGGGCACGATGTGACCATCTACAAGACG 300
|| | ||||||| ||| ||||||||||||||||||| |||||||||||
as00041 223 GGCTCTTGGGCCCTGTGGACAAAGGGCACGATGTGACCTTCTACAAGACG 272
L L G P V D K G H D V T F Y K T
301 ----+----*----+----*----+----*----+----*----+----* 350
W Y L S S R G E V Q M C K E H R P
mfj00880 301 TGGTACCTCAGCTCACGAGGCGAGGTCCAGATGTGCAAAGAACACCGGCC 350
||||||| |||||| | |||||||| |||| ||| ||| | ||||||
as00041 273 TGGTACCGCAGCTCGAGGGGCGAGGTGCAGACCTGCTCAGAGCGCCGGCC 322
W Y R S S R G E V Q T C S E R R P
351 ----+----*----+----*----+----*----+----*----+----* 400
I R N F T L Q H L - H H G S H L
mfj00880 351 CATACGCAACTTCACATTGCAGCACCTTCA...GCACCACGGAAGCCACC 397
||| |||||| |||| || ||| ||||||| |||||| ||| ||||||
as00041 323 CATCCGCAACCTCACGTTCCAGGACCTTCACCTGCACCATGGAGGCCACC 372
I R N L T F Q D L H L H H G G H Q
401 ----+----*----+----*----+----*----+----*----+----* 450
K A N A S H D Q P Q K H G L E L
mfj00880 398 TGAAAGCCAACGCCAGCCATGACCAGCCCCAGAAGCATGGGCTAGAGCTA 447
| |||||| ||||||| |||| | | ||| || ||||| |||
as00041 373 AGGCTGCCAACACCAGCCACGACCTGGCTCAGCGCCACGGGCTGGAGTCG 422
A A N T S H D L A Q R H G L E S
451 ----+----*----+----*----+----*----+----*----+----* 500
A S D H H G N F S I T L R N V T P
mfj00880 448 GCTTCTGACCACCACGGTAACTTCTCTATCACCCTGCGCAATGTGACCCC 497
|| || |||||||| || |||||||| |||||| ||||||| ||||||
as00041 423 GCCTCCGACCACCATGGCAACTTCTCCATCACCATGCGCAACCTGACCCT 472
A S D H H G N F S I T M R N L T L
501 ----+----*----+----*----+----*----+----*----+----* 550
R D S G L Y C C L V I E L K N H H
mfj00880 498 AAGGGACAGCGGCCTCTACTGCTGTCTAGTGATAGAATTAAAAAACCACC 547
||| ||||||||||||||||| || ||| | || | | ||||||
as00041 473 GCTGGATAGCGGCCTCTACTGCTGCCTGGTGGTGGAGATCAGGCACCACC 522
L D S G L Y C C L V V E I R H H H
551 ----+----*----+----*----+----*----+----*----+----* 600
P E Q R F Y G S M E L Q V Q A G
mfj00880 548 ACCCAGAACAACGGTTCTACGGGTCCATGGAGCTACAGGTACAGGCAGGC 597
|| | || || || || | || |||||||||| ||||| ||| |||||
as00041 523 ACTCGGAGCACAGGGTCCATGGTGCCATGGAGCTGCAGGTGCAGACAGGC 572
S E H R V H G A M E L Q V Q T G
601 ----+----*----+----*----+----*----+----*----+----* 650
K G S G S T C M - S N E Q D S
mfj00880 598 AAAGGCTCGGGGTCCACATGCATGG......CGTCTAATGAGCAGGACAG 641
|||| | |||| || ||| | || ||||| ||
as00041 573 AAAGATGCACCATCCAACTGTGTGGTGTACCCATCCTCCTCCCAGGAGAG 622
K D A P S N C V V Y P S S S Q E S
651 ----+----*----+----*----+----*----+----*----+----* 700
D S I T A A A L A T G A C I V G I
mfj00880 642 TGACAGCATCACGGCTGCGGCCCTGGCCACCGGCGCCTGCATCGTGGGAA 691
||| | |||||||||||| |||||||| || || ||||||||||| ||||
as00041 623 TGAAAACATCACGGCTGCAGCCCTGGCTACGGGTGCCTGCATCGTAGGAA 672
E N I T A A A L A T G A C I V G I
701 ----+----*----+----*----+----*----+----*----+----* 750
L C L P L I L L L V Y K Q R Q V
mfj00880 692 TCCTCTGCCTCCCCCTTATCCTGCTGCTGGTCTATAAGCAGAGACAGGTG 741
|||||||||||||||| |||||||| |||||||| ||||| || ||||
as00041 673 TCCTCTGCCTCCCCCTCATCCTGCTCCTGGTCTACAAGCAAAGGCAGGCA 722
L C L P L I L L L V Y K Q R Q A
751 ----+----*----+----*----+----*----+----*----+----* 800
A S H R R A Q E L V R M D S N T Q
mfj00880 742 GCCTCTCACCGCCGTGCCCAGGAGTTGGTGAGGATGGACAGCAACACCCA 791
||||| ||||||||||||||||| ||||| ||||||||||||||| ||
as00041 723 GCCTCCAACCGCCGTGCCCAGGAGCTGGTGCGGATGGACAGCAACATTCA 772
A S N R R A Q E L V R M D S N I Q
801 ----+----*----+----*----+----*----+----*----+----* 850
G I E N P G F E T T P P F Q G M P
mfj00880 792 AGGAATCGAAAACCCAGGCTTCGAGACCACTCCACCCTTCCAGGGGATGC 841
||| || |||||||| ||||| || || | ||||| ||||||||| |
as00041 773 AGGGATTGAAAACCCCGGCTTTGAAGCCTCACCACCTGCCCAGGGGATAC 822
G I E N P G F E A S P P A Q G I P
851 ----+----*----+----*----+----*----+----*----+----* 900
E A K T R P P L S Y V A Q R Q P
mfj00880 842 CTGAGGCCAAGACCAGGCCGCCACTGTCCTATGTGGCCCAGCGGCAACCT 891
| |||||||| ||||| || ||||||||||||||||||||||| |||
as00041 823 CCGAGGCCAAAGTCAGGCACCCCCTGTCCTATGTGGCCCAGCGGCAGCCT 872
E A K V R H P L S Y V A Q R Q P
901 ----+----*----+----*----+----*----+----*----+----* 950
S E S G R Y L L S D P S T P L S P
mfj00880 892 TCGGAGTCAGGACGGTACCTGCTCTCTGACCCCAGCACACCTCTGTCGCC 941
|| ||||| || ||| | ||||| || || |||||||| || ||||| ||
as00041 873 TCTGAGTCTGGGCGGCATCTGCTTTCGGAGCCCAGCACCCCCCTGTCTCC 922
S E S G R H L L S E P S T P L S P
951 ----+----*----+----*----+----*----+----*----+----* 1000
P G P G D V F F P S L D P V P D S
mfj00880 942 TCCAGGCCCTGGGGACGTCTTTTTCCCATCCCTAGATCCAGTCCCTGACT 991
||||||||| || |||||||| ||||||||||| || || ||||||||||
as00041 923 TCCAGGCCCCGGAGACGTCTTCTTCCCATCCCTGGACCCTGTCCCTGACT 972
P G P G D V F F P S L D P V P D S
1001 ----+----*----+----*----+----*----+----*----+----* 1050
P N S E A I *
mfj00880 992 CCCCTAACTCTGAAGCCATCTAAACCAGCTGGGGAACCATGAACCATGGT 1041
| || |||| ||| | |||||| |||||||||| || || | | ||
as00041 973 CTCCAAACTTTGAGGTCATCTAGCCCAGCTGGGGGACAGTGGGCTGTTGT 1022
P N F E V I *
1051 ----+----*----+----*----+----*----+----*----+----* 1100
mfj00880 1042 ACCTGGGTCAGGGATATGTGCACTTGATCTATGGCTGGCCCT.TGGACAG 1090
||||||| ||| | ||||| |||| | | ||||||| || || |
as00041 1023 GGCTGGGTCTGGGGCAGGTGCATTTGAGCCAGGGCTGGCTCTGTGAGTGG 1072
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mfj00880 1091 TCTTTTAGGCACTGACTCCAGCTTCCTTGCTCCTGCTCTGAGCCTAGACT 1140
|| | ||| | | | | | ||| ||||||||||| || |||
as00041 1073 CCTCCTTGGCCTCGGCCCTGGTTCCCTCCCTCCTGCTCTGGGCTCAGATA 1122
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mfj00880 1141 CTG.CTTTTACAAGATGCACAGACCCTCCCCTATCTCTTTCAGACGCTAC 1189
||| | | ||| || ||| ||||| | | | | || |||||
as00041 1123 CTGTGACATCCCAGAAGCCCAGCCCCTC....AACCCCTCTGGATGCTAC 1168
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mfj00880 1190 TTGGGGGGCAGGGAGAAGATGTTGGATTGCTCA.TTGCTGTTCTCAAGAT 1238
|||| |||| |||| ||||| |||||| | |||
as00041 1169 ATGGG............GATGCTGGACGGCTCAGCCCCTGTTCCAAGGAT 1206
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mfj00880 1239 CTTGGGATGCTGAG..TTCTCCCTAGAGACTTG.ACTTCGACAGCCACAG 1285
||||| ||||||| | |||||||||| || | ||| |||| ||||
as00041 1207 TTTGGGGTGCTGAGATTCTCCCCTAGAGACCTGAAATTCACCAGCTACAG 1256
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mfj00880 1286 ATGTCAGATGACCTGCATCCTATGAACGTCCGG................. 1318
||| || ||||| | |||| || ||| | |
as00041 1257 ATGCCAAATGACTTACATCTTAAGAAGTCTCAGAACGTCCAGCCCTTCAG 1306
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mfj00880 1319 .....CTTGGCAAGAGCCTTTCTTCATGGAAACCAGTAGCCCGGAGGGGA 1363
|| | ||| | | | ||| | | ||| ||||
as00041 1307 CAGCTCTCGTTCTGAGACATGAGCCTTGGGATGTGGCAGCATCAGTGGGA 1356
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mfj00880 1364 TGAGGTAGGCACCTTGCCACCCTCCCGGGAGAGAGACACA....AGATGT 1409
|| | | ||| ||||||||||| || ||||||| |
as00041 1357 CAAGATGGACACTGGGCCACCCTCCCAGGCACCAGACACAGGGCACGGTG 1406
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mfj00880 1410 GAGAGACTCCTGCTCACTGTGGGGGTGTGGCTGGCCTGCTTGTTTGCCTG 1459
|||||||| || | | || | | ||||| || | | ||||| |
as00041 1407 GAGAGACTTCTCCCCCGTG.GCCGCCTTGGCTCCCCCGTT...TTGCCCG 1452
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mfj00880 1460 AGGATGCTCCTCTGTTGGACTGACTCTAT...CCCCCTGGATTCTGGAGC 1506
||| ||||| ||||| |||| |||| | || | | ||||| ||
as00041 1453 AGGCTGCTCTTCTGTCAGACTTCCTCTTTGTACCACAGTGGCTCTGGGGC 1502
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mfj00880 1507 TTGGCTGGCCT.ATGTCCCACCAGAGGAGCAT..CTCAGCAGCCTTCCAC 1553
||| |||| | ||| | | | | |||| |||| | ||
as00041 1503 CAGGCCTGCCTGCCCACTGGCCATCGCCACCTTACCCAGCTGCCTCCTAC 1552
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mfj00880 1554 CAGCA....ACCTGAGGGCCTGCCAGCTTCGTGGCTC.....TGGGCTCT 1594
||||| |||| | ||| || | | || |||||
as00041 1553 CAGCAGTTTCTCTGAAGATCTGTCAACAGGTTAAGTCAATCTGGGGCTTC 1602
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mfj00880 1595 CATTACCTGTATGGCCGTCCACAGAGCTCAGTGGCCAGAGGCTTTGAAAC 1644
|| | |||| || | |||| ||||||| |||| | |||||
as00041 1603 CACTGCCTGCATTCCAGTCCCCAGAGCTTGGTGGTC.......CCGAAAC 1645
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mfj00880 1645 AGGAAGTACATGTCAGGTTCAGG.AACCACTGTGAGCTCATTAGTGTCTT 1693
|||||||||| | || || || | |||||| | | |||||||
as00041 1646 GGGAAGTACATATTGGGGCATGGTGGCCTCCGTGAGC.AAATGGTGTCTT 1694
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mfj00880 1694 GAGCAATGTGAGGCCTGGA...............CCAGTGGACACGGAG. 1727
| ||||| ||||||| ||| ||| |||| | || |
as00041 1695 GGGCAATCTGAGGCCAGGACAGATGTTGCCCCACCCACTGGAGATGGTGC 1744
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mfj00880 1728 GGAGGGTGGCGAGAGGATGAT..GGGGATGATGAGGGGAACACGCTCCCT 1775
||||| || | | || | |||| | |||| ||| | |||
as00041 1745 TGAGGGAGGTGGGTGGGGCCTTCTGGGAAGGTGAGTGGAGAGGGGCACCT 1794
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mfj00880 1776 ...TCCTGTCCTTGTCATCCACCACTACCACTATTCAGTGTGGAGCAGTG 1822
|| | ||| ||||| | ||| ||||| |||| | || || |
as00041 1795 GCCCCCCGCCCTCCCCATCCCCTACTCCCACTGCTCAGCGCGG.GCCATT 1843
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mfj00880 1823 GCAAAGGTGACCGACCTCCACAATGTCCTAGTGATGCTGGACCATTTCTA 1872
|||| |||| | ||||||||| | | |||| || ||||
as00041 1844 GCAAGGGTGCC......ACACAATGTCTTGTCCACCCTGGGACACTTCTG 1887
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mfj00880 1873 AGTGTGAA.AGAGATGCTATTAAAAACAGTATGTGGCAATGGCTGCCAAC 1921
||| |||| | ||||||||||||||| ||| || || | ||| |||
as00041 1888 AGTATGAAGCGGGATGCTATTAAAAACTACATGGGGAAACAGGTGCAAAC 1937
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mfj00880 1922 AGCTGAG.TGGACTGGAGGCACTGGCTTTAA.GGCCCTGGAGGTGCAGGG 1969
||| |||| || | | | | || || | | |||
as00041 1938 CCTGGAGATGGATTGTAAGAGCCAGTTTAAATCTGCACTCTGCTGCTCCT 1987
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mfj00880 1970 CCCGGTATGGGGATAGGGATGGGAGTTTCAGTGAGGGCCTAGGGATCACT 2019
||| | | | || | |||||| | | ||
as00041 1988 CCCCCACCCCCACCTTCCACTCCA..TACAATCTGGGCCTGGTGGAGTCT 2035
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mfj00880 2020 CCGCTTCTGA.CCACTCTTCTTCTGAGCCTCACCTCAGGGTGACCTTCAG 2068
|||||| || ||| || | || | |||||| |||
as00041 2036 TCGCTTCAGAGCCATTCGGC..........CAGGTGCGGGTGATGTTC.. 2073
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mfj00880 2069 GCACACAGAAGAGCTTGCCCCTGGTCCGATACTACTCTTGGCTCTCATCT 2118
| | ||| ||| | || ||| | | |
as00041 2074 .......CCATCTCCTGCTTGTGGGCATGCCCTGGCTTTGTTTTTATACA 2116
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mfj00880 2119 CCAGGGTTTGGCATGACCTGGGCACACAGGGGGAGTCTTCAGAAAGGATT 2168
| || | || | | | | || | | | |||||||
as00041 2117 CATAGG.......CAAGGTGAGTCCTCTGTGGAATTGTGATTGAAGGATT 2159
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mfj00880 2169 TTAAAGCATGAAAAGAAAGGGTAGTTCTTGT............GAGGTAG 2206
|||||||| | | || || | | | | | ||||
as00041 2160 TTAAAGCAGGGGAGGAGAGTAGGGGGCATCTCTGTACACTCTGGGGGTAA 2209
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mfj00880 2207 GGATGGGCAGCTGATGTTTGAGAGTG.....AGGAGGGATACGGCTGGGC 2251
||| || || |||| || ||| | | | ||||||||
as00041 2210 AACAGGGAAGGCAGTGCCTGAGCATGGGGACAGGTGAGGTGGGGCTGGGC 2259
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mfj00880 2252 AGATCACTCTCCAGTCTCTAGAGGGAAAGTAGCTCTAAGT..CTGGGAGA 2299
||| | | || || | ||| ||| | || | | || |||||
as00041 2260 AGA.CCCCCTGTAGCGTTTAGCAGGATGGGGGCCCCAGGTACTGTGGAGA 2308
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mfj00880 2300 GCAGCAGCCCAGTGGTACCATATGTCTTCTTGCAGCTTCCACTGGCTGGG 2349
||| || |||| ||| ||||| || ||||| | |||||||| |
as00041 2309 GCA.TAGTCCAGCCTGGGCATTTGTCTCCTAGCAGCCTACACTGGCTCTG 2357
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mfj00880 2350 CTGAACTGGGCATGGGTAGGAAAGCTCCTGTTCTGGGCCTGCAGCCAGGG 2399
|||| |||||| ||||| || | | | |||| || || | ||
as00041 2358 CTGAGCTGGGCCTGGGTGCTGAAAGCCAGGATTTGGGGCT..AGGCGGGA 2405
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mfj00880 2400 AGAACCCCATTCATTCCCTGAGGACAGATGGGTGGGGAGAGAAGAGAG.A 2448
||| | || | || || ||| | | | | | ||| |
as00041 2406 AGATGTTCGCCCAATTGCTTGGGGGGTTGGGGGGATGGAAAAGGGGAGCA 2455
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mfj00880 2449 GTTTCAGGCCGGGAAGCAGCAATAAGCTATCTG.CTGGGGACCCAGACA. 2496
| |||| | |||||| | ||| | | ||| || ||| ||
as00041 2456 CCTCTAGGCTGCCTGGCAGCAGTGAGCCCTGGGCCTGTGGCTACAGCCAG 2505
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mfj00880 2497 .................................................. 2497
as00041 2506 GGAACCCCACCTGGACACATGGCCCTGCTTCTAAGCCCCCCAGTTAGGCC 2555
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mfj00880 2497 .................................................. 2497
as00041 2556 CAAAGGAATGGTCCACTGAGGGCCTCCTGCTCTGCCTGGGCTGGGCCAGG 2605
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mfj00880 2497 .................................................. 2497
as00041 2606 GGCTTTGAGGAGAGGGTAAACATAGGCCCGGAGATGGGGCTGACACCTCG 2655
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mfj00880 2497 AGTTGTCTGATGAGGTCCAAGATGTGGGATGCCAGTTATACCTGGGGCTT 2546
||| | | || | | |||| || | | || | ||| ||
as00041 2656 AGTGGCCAGAATATGCCCAAACCCCGGCTTCTCCCTTGTCCCTAGGCAGA 2705
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mfj00880 2547 GGGG......ATCCTTAGAGGCTTTGTATCATCATCAT............ 2578
|||| || || | | | ||| || ||
as00041 2706 GGGGGGTCCCTTCTTTTGTTCCCTCTGGTCACCACAATGCTTGATGCCAG 2755
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mfj00880 2579 ...........AGGAGTGTCGGGGTGGCCAGGGCATCAAAGCCATGACCC 2617
|| | | || |||||| || || | | || ||
as00041 2756 CTGCCATAGGAAGAGGGTGCTGGCTGGCCATGGTGGCACACACCTGTCCT 2805
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mfj00880 2618 CTGTTTTATCCTCAGGGTCCACTCTTCTGCACC................. 2650
| | ||||| | | |||
as00041 2806 CCCAGCACTTTGCAGGGCTGAGGTGGAAGGACCGCTTAAGCCCAGGTGTT 2855
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mfj00880 2651 .................................................. 2651
as00041 2856 CAAGGCTGCTGTGAGCTGTGTTCGAGCCACTACACTCCAGCCTGGGGACG 2905
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mfj00880 2651 ......ATCCATTGCTCTAGATCTATGCAGTTACTATAGACAGAATG..T 2692
| | | ||| | | || | | ||| |||| |
as00041 2906 GAGCAAAACTTTGCCTCAAAACAAATTTTAAAAAGAAAGAAAGAAGGAAA 2955
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mfj00880 2693 GTTGTTCTGTTTGGCTTTGGGGATAATGGCCTGGCGAACTGCCAGCTGTT 2742
| | | ||||| | || |||||| | | |
as00041 2956 GAGGGTATGTTTTTCACAATTCATGGGGGCCTGCATGGCAGGAGTGGGGA 3005
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mfj00880 2743 CAGTGGCAGGGCTGTGAGGCCAGTCAAAGACTAGAACCCACAGACCAGCT 2792
||| ||||| |||| ||| | | ||||||| |||| |
as00041 3006 CAGGACACCTGCTGTTCCTGGAGTCGAAGGACA.AGCCCACAGCCCAGAT 3054
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mfj00880 2793 ...............GAACGATGAGTATAGCCTGTCCCCTGGGGGAGCCT 2827
| || ||| || |||| || || |||||| ||
as00041 3055 TCCGGTTCTCCCAACTCAGGAAGAGCATGCCCTGCCCTCT.GGGGAGGCT 3103
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mfj00880 2828 GACCTGTCTCCAGCCCTAAGCTTCAGACCTCACCACTCAGATGACTTCTA 2877
| |||| | |||||||| |||| | ||||| | ||| |||||||
as00041 3104 GGCCTGGCCCCAGCCCTCAGCTGCTGACCTTGAGGCAGAGACAACTTCTA 3153
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mfj00880 2878 AGAATTTGCCTGTGGGGACCCCTGCATGGCTGCAGCTCCGTGGAAAGGAG 2927
|||||||| ||| | ||| || ||||||| ||| ||||| ||| |
as00041 3154 AGAATTTGGCTGCCAGACCCCAGGCCTGGCTGCTGCTGTGTGGAGAGG.G 3202
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mfj00880 2928 AGGAGGCCCCCAGCAGAAGAACCA.CTCGCTTCCTGCCCAGCTTCCTCCT 2976
||| ||||| | |||||| | ||| | | |||||| | ||||||||||
as00041 3203 AGGCGGCCCGCGGCAGAACAGCCACCGCACTTCCTCCTCAGCTTCCTCTG 3252
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mfj00880 2977 GTAGGGCTCTAAGTCTCTTCTTCTTGGGACCC...TGCAAGCAAAGGCAT 3023
|| ||| || | | |||||| |||||| | ||| || ||||
as00041 3253 GTGCGGCCCT..GCCCTCTCTTCTCTGGACCCTTTTACAACTGAACGCAT 3300
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mfj00880 3024 GTCAGCTTGGTGGTTTCCTGTTTTGGGTGAAGTTT..TGTGTGGTCCGGG 3071
| |||| ||||||||||||||| | ||| ||| | || | ||| |
as00041 3301 CTGGGCTTCGTGGTTTCCTGTTTTCAGCGAAATTTACTCTGAGCTCCCAG 3350
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mfj00880 3072 TTCTGTCTACATCCAT......................GAACTTGGGTGC 3099
||| ||| ||||||| | ||| |||
as00041 3351 TTCCATCTTCATCCATGGCCACAGGCCCTGCCTACAACGCACTAGGGACG 3400
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mfj00880 3100 TACCACCTTGCTGCTGCTGTAGAGACAGCTGCAGGATCTTAGGGTGGAAA 3149
| || || ||||||||||| | || ||||| | | | | |
as00041 3401 TCCCTCCCTGCTGCTGCTG....GGGAGGGGCAGGCTGCTGGAGCCGCCC 3446
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mfj00880 3150 ATGGAGGTGC..............CCTGAGGTGCTAGCCCTTGGGGCAAA 3185
||| ||| ||| | ||| |||||| | |||
as00041 3447 TCTGAGTTGCCCGGGATGGTAGTGCCTCTGATGCCAGCCCTGGTGGCTGT 3496
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mfj00880 3186 AGATGGGGTGGCAATGAGACAC....AGTGGGGAACTGAGTTCCCCAAGA 3231
| ||| ||| | | | | | | || | ||| |
as00041 3497 GGGCTGGGGTGCATGGGAGAGCTGGGTGCGAGAACATGGCGCCTCCAGGG 3546
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mfj00880 3232 GGAGGGAGGAGCCCT.............GTAGCCTCAAGGGCCATATTGG 3268
|| ||||||||| || | || ||| || | |||
as00041 3547 GGCGGGAGGAGCACTAGGGGCTGGGGCAGGAGGCTCCTGGAGC..GCTGG 3594
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mfj00880 3269 GTTCCTGGTACCAGCAAAAGCCTAGAGAGCGAAGTCTGTATTTTGAGGAG 3318
||| ||| || | | ||| ||||| ||| || | ||| | ||
as00041 3595 ATTCGTGGCACAGTCTGAGGCCCTGAGAGGGAAATCCATGCTTTTAAGAA 3644
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mfj00880 3319 GTAATTGATCCTTACGGAATCCATCAGAAATTTGGAGCGGGTGCTTTATC 3368
||||| || ||| | ||| ||||| |||| || || ||| |
as00041 3645 CTAATTCATTGTTAGGAGATCAATCAGGAATT...AGGGGCCATCTTACC 3691
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mfj00880 3369 TATCTCTGGAGGGTCTC..........TACCTATCTCCGATGAAGCTCTC 3408
|||||| || || | || || | | | | |||
as00041 3692 TATCTCCTGACATTCACAGTTTAATAGAGACTTCCTGCCTTTATTCCCTC 3741
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mfj00880 3409 CCTG............GGCCTGGGATGGGAGAAACCAGGAGGAAAGGTGT 3446
|| | || ||| || | | |||| ||| | | |
as00041 3742 CCAGGGAGAGGCTGAAGGAATGGAATTGAAAGCACCATTTGGAGGGTTTT 3791
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mfj00880 3447 .CTGATAAAGCAGGGGCTTCTTGACAAGCCAAA..............GGG 3481
|||| | ||| ||| | || || || | ||
as00041 3792 GCTGACACAGCGGGGACCGCTCAGCACTCCCTAAAAACACACCATGGAGG 3841
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mfj00880 3482 CCACTGGTAGCTGTTGTGGACCGAGCTGACCCTGC............... 3516
|||||||| ||| || | | |||| ||||||
as00041 3842 CCACTGGTGACTGCTGGTGGGCAGGCTGGCCCTGCCTGGGGGAGTCCGTG 3891
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mfj00880 3517 ..............TGAAGTATTGTAGTGTGCCTTGGACCAACTTCTCAA 3552
| | || || || ||||| ||| ||||
as00041 3892 GCGATGGGCGCTGGGGTGGAGGTGCAGGAGCCCCAGGACCTGCTTTTCAA 3941
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mfj00880 3553 AAGAGCAACCCCGGGGCTACCCTACTTCTGCCAGGAAGAGGCGGAGAAGG 3602
|||| || | | || | || | | | | | |
as00041 3942 AAGACTTCTGCCTGACCAGAGCTCCCACTACATGCAGTGGCC.....CAG 3986
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mfj00880 3603 GGCTGAGAGGCCTGGAAGGGGCTAGCTCCTTCTTTGAGAACTGCTC.CCC 3651
||| ||| ||| | ||| || ||| | | || ||| |
as00041 3987 GGCAGAGGGGCTGATACATGGC...CTTTTTCAGGGGGTGCTCCTCGCGG 4033
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mfj00880 3652 GGAGGACTTGGAGGAGGCGGCTAGGCTACGGGCTGCTGAGGGCCCTTTGT 3701
|| |||||||| | | | || | ||| ||| |||
as00041 4034 GGTGGACTTGGGAGTGTGCAGTGGGACAGGGGGCTGCAGGGGTCCTGCCA 4083
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mfj00880 3702 CTTTC.....CTAACCTGGGCACTGTTAGGATGCTCCCTCCTGGAAAAGG 3746
| | | ||| ||| | ||| || | || || | || | |||
as00041 4084 CCACCGAGCACCAACTTGGCCCCTG...GGGTCCTGCCCCATGAATGAGG 4130
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mfj00880 3747 CTTTCCTGGGTGTGAGCTAGAGCAGTGTCCATGCCAGCGCTGAACCTGCC 3796
| |||| |||| |||| | |
as00041 4131 CCTTCC...........................CCAGGGCTGGCCTGACT 4153
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mfj00880 3797 ATGGTGGGAGCTGAACTAAAAATTTCTCAGGGAACTAAAATAGGCAAAAG 3846
|| |||| |||| ||| ||||||||||||| | ||| | ||||
as00041 4154 GTGCTGGGGGCTGGGTTAACGTTTTCTCAGGGAACCACAATGCACGAAAG 4203
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mfj00880 3847 AGGAACTGGGGGAGGAGGGTGCCAGGCAGGATGGGGGGAAGGGAGGGCAG 3896
||||||||| || ||| | ||||||| |||||
as00041 4204 AGGAACTGG.......GGTTGCTAACCAGGATGCTGGGAA.......... 4236
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mfj00880 3897 TGCAAAAGTCTCTTGAAACACAG..ACAGCCCAGCTGAGTGCCAGTCCCA 3944
|||| | |||||||| | ||| |||||||||||||| || ||||
as00041 4237 ..CAAAGGCCTCTTGAAGCCCAGCCACAGCCCAGCTGAGCATGAGGCCCA 4284
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mfj00880 3945 GATCACAGAGAATACGGCTCATCTGGCTCATGTTCTGCATGCTTGCTGCT 3994
| || ||| || | || ||||| ||| ||| | |||||
as00041 4285 GCCCATAGACGGCACAGGCCACCTGGCCCATTCCCTGGGCATTCCCTGCT 4334
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mfj00880 3995 TTACCCTGGCACTTTCCTTCTCCACCATGAGTGCGAGTCCTGGGAGTCCT 4044
|| | || ||| |||| || | |||
as00041 4335 TTGCATTGCTGCTTCTCTTCACCCCATGGAG................... 4365
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mfj00880 4045 GGGAGGGTGAGGATTAATGCCAGCCTGGGGAGCAGATAGCTGACAGAGTC 4094
||| || ||| |
as00041 4366 .............GCTATGTCACCCTAACTA................... 4383
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mfj00880 4095 CTTGGGTAACTGGCTTGAACCAGGACCTCAGGATTCCACTCTGGGGATCT 4144
as00041 4384 .................................................. 4384
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mfj00880 4145 AGCTTTGTCTGGGCCAGTGAAGATCTCTATAATGGCATTATTGCCAGGGG 4194
as00041 4384 .................................................. 4384
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mfj00880 4195 ATAAACATTTCACTGGGTTCTGATCTGTTGGGTGTGGCTTCCTGGAAAAT 4244
||||||| ||
as00041 4384 .......................................TCCTGGA..AT 4392
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mfj00880 4245 ATGGTGAGAGGAATTCTG..CTAAGGATACAG.TTGATAAGAAAGTTCTG 4291
|| ||||||| |||||| | ||| || ||| | ||| ||| | |
as00041 4393 GTGTTGAGAGGGATTCTGAATGATCAATATAGCTTGGTGAGACAGTGCCG 4442
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mfj00880 4292 AGATTGATTAGTAATGCCTGCCTTGGACTCAGGA.AGGGAAGTGGCAGTA 4340
|||| || ||| ||| ||||||||| | | ||| ||||||||||||| |
as00041 4443 AGATAGA.TAGCCATGTCTGCCTTGGGCACGGGAGAGGGAAGTGGCAGCA 4491
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mfj00880 4341 TGAATGCCATGTCTTAATCATTTTGGTTAAAATA.....TGCTTCCCAAA 4385
|| |||| | |||| | ||| |||| |||| ||||| ||||
as00041 4492 TGCATGCTGTTTCTTGGCCTTTTCTGTTAGAATACTTGGTGCTTTCCAAC 4541
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mfj00880 4386 AGATTTCCACGTGTGTTCTTGTTTATTTGACATCTGTCTCCATATCAGTC 4435
| | || ||| |||||| | || |||||
as00041 4542 ACACTTTCACATGTGTTGTAACTTGTTTGA.................... 4571
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mfj00880 4436 TTGAAAGCCTTTCTGTGTGTATATATATGATGTTTGCGTGTATATATGTT 4485
as00041 4572 .................................................. 4572
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mfj00880 4486 TTTGTGTGTGCATATGGAAGTCAGAAATCACTGGGTGTCTTCCTCCATTC 4535
| || |||
as00041 4572 ......................................TCCACCCCCTTC 4583
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mfj00880 4536 CTTTGCAATGTATGTTTTTTTTTTTTTTACGATTTATTTACTATATGAAT 4585
| | ||| | |||| || | | |||||
as00041 4584 CCTGAAAATCCTGGGAGGTTTTATTGCTGCCATTTA.............. 4619
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mfj00880 4586 GTTTTGCCTGAATACATGCATAGGTGTCACGTACATGCCTGCTGGAACGC 4635
as00041 4620 .................................................. 4620
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mfj00880 4636 TTGGAACTGGAGTTACAGGTGGCTATGAGCTACAGTGTGAGCACTGGGAA 4685
|||| ||| || | ||
as00041 4620 ............ACACAGAGGGCAAT................AGAGGTTC 4641
5201 ----+----*----+----*----+----*----+----*----+----* 5250
mfj00880 4686 TCAAACCTGGGTCTTCTGCAAGAGCAACAAATTAAAAGTCAGCTCTTAAC 4735
| ||| | || | || | | ||| |||
as00041 4642 TGAAAGGTCTGTGTCTTGTCAAAACAA..................GTAAA 4673
5251 ----+----*----+----*---- 5274
mfj00880 4736 TACTTGAGCTATTTTTCCAACTCC 4759
| || ||| |
as00041 4674 CGGTGGAACTACGACT........ 4689