Comparison of KIAA cDNA sequences between mouse and human (KIAA0872)
<<Original sequence data>>
mouse mKIAA0872 (mfj00394) length: 4705 bp, CDS: 2 - 1657
human KIAA0872 (hk07213) length: 4118 bp, CDS: 20 - 1678
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 40 - 40 1 0 0.0
CDS: 41 - 1699 1393 246 15.0
3'UTR: 1700 - 4880 1319 979 42.6
amino acid
CDS: 41 - 1699 482 64 11.7
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
A G G D
mfj00394 1 .......................................GGCCGGAGGAG 11
|| ||||||||
hk07213 1 AATTGAGATTCGGAGTTAAAACAGGGATGTGCAGATGGAGGTCGGAGGAG 50
N R D V Q M E V G G D
51 ----+----*----+----*----+----*----+----*----+----* 100
N A V P A P G G V E D L V D T Q
mfj00394 12 ATAATGCTGTCCCAGCCCCCGGGGGCGTGGAGGACTTGGTGGACACGCAG 61
| | ||||| ||| ||||||||||||| ||||||||||| ||||||||||
hk07213 51 ACACTGCTGCCCCGGCCCCCGGGGGCGCGGAGGACTTGGAGGACACGCAG 100
T A A P A P G G A E D L E D T Q
101 ----+----*----+----*----+----*----+----*----+----* 150
F P R E E A G D S E R V H A S T L
mfj00394 62 TTCCCCAGAGAGGAGGCTGGAGACAGTGAAAGGGTTCACGCAAGCACGCT 111
|||||||| ||||| ||| |||| ||| | |||||||||| | |||
hk07213 101 TTCCCCAGTGAGGAAGCTAGAGAAGGTGGAGGGGTTCACGCGGTCCCGCC 150
F P S E E A R E G G G V H A V P P
151 ----+----*----+----*----+----*----+----*----+----* 200
D P G D G D P E D T G S K D Q H
mfj00394 112 GGATCCCGGAGATGGGGACCCGGAGGACACAGGATCCAAGGACCAG..CC 159
|||||||| ||| | || || |||||| ||||||||||||||| || ||
hk07213 151 GGATCCCGAAGACGAGGGCCTGGAGGAAACAGGATCCAAGGACAAGGACC 200
D P E D E G L E E T G S K D K D Q
201 ----+----*----+----*----+----*----+----*----+----* 250
P A L S P L P Q T E A A S S T
mfj00394 160 ATCCAGCC.TCCTATCACCTCTGCCTCAGACTGAGGCTGCATCAAGCACC 208
| ||| || || |||||| | ||| ||| | ||||| |||||||||
hk07213 201 AGCCACCCAGCCCATCACCACCGCCCCAGTCAGAGGCCCTGTCAAGCACC 250
P P S P S P P P Q S E A L S S T
251 ----+----*----+----*----+----*----+----*----+----* 300
C E H W T A A A S D S S P P G E
mfj00394 209 TGTGAGCACTGGGAAACTGCAGCAGCCTCAGACAGCAGCCCCCCCGGAGA 258
| | || |||| | | | |||||| | || | || ||| | |
hk07213 251 TCTCGGCTCTGG...AGTCCTGCAGCCCCTGAGAATAGTCCCACATGTAG 297
S R L W S P A A P E N S P T C S
301 ----+----*----+----*----+----*----+----*----+----* 350
P E S N S E G Q G G D
mfj00394 259 ACCTGAGAGTAACTCTGAGGGTCAGGGAGAAGACCCCGACGATGGGGGGG 308
|||||||||| ||||| || ||| || ||||
hk07213 298 CCCTGAGAGTAGCTCTGGAGGCCAG..................GGCGGGG 329
P E S S S G G Q G G D
351 ----+----*----+----*----+----*----+----*----+----* 400
P S D E D W R S Q R K H V F V L
mfj00394 309 ACCCCAGTGACGAGGACTGGCGCAGCCAGCGGAAGCACGTGTTCGTGCTG 358
|||||||||| ||||| |||||||||||||||||||| ||||| ||||||
hk07213 330 ACCCCAGTGATGAGGAGTGGCGCAGCCAGCGGAAGCATGTGTTTGTGCTG 379
P S D E E W R S Q R K H V F V L
401 ----+----*----+----*----+----*----+----*----+----* 450
S E A G K P I Y S R Y G S V E A L
mfj00394 359 AGTGAGGCAGGCAAGCCCATCTACTCACGGTACGGTAGCGTGGAGGCACT 408
|||||||| ||||||||||||||||| ||||| ||||| |||||||| ||
hk07213 380 AGTGAGGCTGGCAAGCCCATCTACTCGCGGTATGGTAGTGTGGAGGCGCT 429
S E A G K P I Y S R Y G S V E A L
451 ----+----*----+----*----+----*----+----*----+----* 500
S A T M G V M T A L V S F V Q S A
mfj00394 409 GTCGGCCACCATGGGGGTGATGACAGCCCTGGTGTCCTTTGTGCAGAGTG 458
|||||| |||||||| || ||||| |||||||||||||||||||||||||
hk07213 430 GTCGGCTACCATGGGTGTAATGACCGCCCTGGTGTCCTTTGTGCAGAGTG 479
S A T M G V M T A L V S F V Q S A
501 ----+----*----+----*----+----*----+----*----+----* 550
G D A I R A I Y A E D H K L V F
mfj00394 459 CAGGAGACGCCATCCGTGCCATCTATGCTGAGGATCACAAGCTGGTGTTC 508
| ||||| ||||||||||||||||| |||||||| |||||||||||||||
hk07213 480 CGGGAGATGCCATCCGTGCCATCTACGCTGAGGACCACAAGCTGGTGTTC 529
G D A I R A I Y A E D H K L V F
551 ----+----*----+----*----+----*----+----*----+----* 600
L Q Q G P L L L V A V S R T P Q S
mfj00394 509 CTGCAGCAGGGTCCACTCCTGCTCGTGGCTGTGTCCCGGACTCCACAGTC 558
|| || ||||| ||||| |||||||||| |||| |||||| | |||||
hk07213 530 CTACAACAGGGCCCACTGTTGCTCGTGGCCATGTCACGGACTTCTCAGTC 579
L Q Q G P L L L V A M S R T S Q S
601 ----+----*----+----*----+----*----+----*----+----* 650
A A Q L R G E L L A V H A Q I V S
mfj00394 559 TGCAGCACAGCTACGAGGTGAACTGCTTGCTGTACACGCCCAAATTGTGA 608
||||| ||||| || || || ||||| ||||| ||||| || || ||||
hk07213 580 AGCAGCCCAGCTGCGGGGGGAGCTGCTAGCTGTGCACGCACAGATCGTGA 629
A A Q L R G E L L A V H A Q I V S
651 ----+----*----+----*----+----*----+----*----+----* 700
T L T R A S V A R I F A H K Q N
mfj00394 609 GCACACTAACGCGTGCAAGCGTGGCCCGCATCTTCGCACATAAGCAGAAC 658
||||||| || |||||||| || ||||||||||||||||| |||||||||
hk07213 630 GCACACTTACACGTGCAAGTGTCGCCCGCATCTTCGCACACAAGCAGAAC 679
T L T R A S V A R I F A H K Q N
701 ----+----*----+----*----+----*----+----*----+----* 750
Y D L R R L L A G S E R T L D R L
mfj00394 659 TATGACCTCCGTCGCCTGTTGGCCGGCTCAGAGCGCACACTGGACCGGCT 708
||||||||||| |||||| |||| || |||||||||||||||||||| ||
hk07213 680 TATGACCTCCGCCGCCTGCTGGCTGGTTCAGAGCGCACACTGGACCGACT 729
Y D L R R L L A G S E R T L D R L
751 ----+----*----+----*----+----*----+----*----+----* 800
L D S V E Q D P G A L L L G A V R
mfj00394 709 CTTGGACAGTGTGGAGCAAGACCCGGGCGCCCTGCTCCTGGGCGCTGTGC 758
|||||||| ||||||| ||||| || |||||||||||||| || ||||
hk07213 730 TCTGGACAGTATGGAGCAGGACCCAGGAGCCCTGCTCCTGGGTGCCGTGC 779
L D S M E Q D P G A L L L G A V R
801 ----+----*----+----*----+----*----+----*----+----* 850
C V P L A R P L R D A L G T L L
mfj00394 759 GCTGTGTGCCTCTGGCCCGTCCACTGCGGGATGCCCTGGGCACACTACTG 808
|||||||||| || ||||| || ||||| || || || || | || ||
hk07213 780 GCTGTGTGCCCCTTGCCCGCCCGCTGCGAGACGCACTAGGTGCGCTCCTC 829
C V P L A R P L R D A L G A L L
851 ----+----*----+----*----+----*----+----*----+----* 900
R R C T A P G L A L S V L A V G G
mfj00394 809 CGGCGCTGTACAGCCCCAGGCCTGGCCTTGTCAGTGCTGGCTGTTGGCGG 858
|| || || ||||| || |||||||| ||||||||||||| || |||||
hk07213 830 CGACGTTGCACAGCGCCTGGCCTGGCGCTGTCAGTGCTGGCAGTAGGCGG 879
R R C T A P G L A L S V L A V G G
901 ----+----*----+----*----+----*----+----*----+----* 950
R L I T V A Q E R N V L A E C R L
mfj00394 859 TCGACTGATAACCGTGGCCCAGGAGAGGAATGTGCTGGCGGAGTGCCGGC 908
|||||| ||||| | ||||||||| ||||||||||||| ||||||||||
hk07213 880 TCGACTTATAACAGCAGCCCAGGAGCGGAATGTGCTGGCCGAGTGCCGGC 929
R L I T A A Q E R N V L A E C R L
951 ----+----*----+----*----+----*----+----*----+----* 1000
D P A D L Q L L L D W V G A P A
mfj00394 909 TGGACCCTGCTGATCTACAGTTGCTGCTTGACTGGGTGGGTGCACCAGCC 958
||||||| ||||| || ||||||||||| |||||||||||||||||||||
hk07213 930 TGGACCCAGCTGACCTGCAGTTGCTGCTCGACTGGGTGGGTGCACCAGCC 979
D P A D L Q L L L D W V G A P A
1001 ----+----*----+----*----+----*----+----*----+----* 1050
F A A G E A W A P V C L P R F N P
mfj00394 959 TTCGCGGCAGGTGAAGCATGGGCACCTGTGTGCCTGCCTCGCTTTAACCC 1008
|| ||||| ||||| || |||||||||||||||||||| ||||| |||||
hk07213 980 TTTGCGGCGGGTGAGGCTTGGGCACCTGTGTGCCTGCCCCGCTTCAACCC 1029
F A A G E A W A P V C L P R F N P
1051 ----+----*----+----*----+----*----+----*----+----* 1100
D G F F Y A Y V A R L D S M P V C
mfj00394 1009 AGATGGTTTCTTCTATGCCTATGTGGCCCGCCTGGATTCCATGCCCGTCT 1058
|||||||| ||||| ||||| ||||||||||||||| | ||||| ||||
hk07213 1030 TGATGGTTTTTTCTACGCCTACGTGGCCCGCCTGGATGCTATGCCTGTCT 1079
D G F F Y A Y V A R L D A M P V C
1101 ----+----*----+----*----+----*----+----*----+----* 1150
L L L L G T N R E A F H A M A A
mfj00394 1059 GCCTGCTGCTGCTTGGTACCAACCGTGAAGCCTTCCATGCCATGGCCGCC 1108
|||||||||||||||| ||| | |||||||||||||||||||||||||||
hk07213 1080 GCCTGCTGCTGCTTGGCACCCAACGTGAAGCCTTCCATGCCATGGCCGCC 1129
L L L L G T Q R E A F H A M A A
1151 ----+----*----+----*----+----*----+----*----+----* 1200
C R R L V E D G M H N L G A L R T
mfj00394 1109 TGCCGGCGCTTAGTTGAAGATGGGATGCACAACCTTGGTGCCCTGCGTAC 1158
||||||||| | || |||||||||||||| |||||||||| ||||| |
hk07213 1130 TGCCGGCGCCTGGTCGAAGATGGGATGCATGCCCTTGGTGCCATGCGTGC 1179
C R R L V E D G M H A L G A M R A
1201 ----+----*----+----*----+----*----+----*----+----* 1250
L G E A A N F S N G P A A S A P A
mfj00394 1159 TCTTGGGGAGGCTGCCAACTTCTCTAATGGCCCAGCAGCCAGTGCCCCAG 1208
|||||||||||||||| ||||||||||| | || |||||||||| || |
hk07213 1180 CCTTGGGGAGGCTGCCAGCTTCTCTAATGCCTCATCAGCCAGTGCTCCTG 1229
L G E A A S F S N A S S A S A P A
1251 ----+----*----+----*----+----*----+----*----+----* 1300
Y S V Q A V G A P G L R H F L Y
mfj00394 1209 CCTACAGTGTGCAGGCTGTGGGAGCCCCTGGCCTCCGGCATTTTCTCTAT 1258
||||||| ||||||||||| || || || ||||||||||| || || |||
hk07213 1230 CCTACAGCGTGCAGGCTGTCGGGGCGCCGGGCCTCCGGCACTTCCTGTAT 1279
Y S V Q A V G A P G L R H F L Y
1301 ----+----*----+----*----+----*----+----*----+----* 1350
K P L D I P E Q H R Q L P Q F T S
mfj00394 1259 AAGCCACTGGATATCCCTGAACAACACCGCCAGCTGCCACAGTTTACCAG 1308
||||| ||||| |||||||| || |||||||| ||||| |||||||||||
hk07213 1280 AAGCCGCTGGACATCCCTGACCACCACCGCCAACTGCCCCAGTTTACCAG 1329
K P L D I P D H H R Q L P Q F T S
1351 ----+----*----+----*----+----*----+----*----+----* 1400
P E L E A P Y S R E E E R Q R L S
mfj00394 1309 TCCCGAGCTAGAGGCCCCATACAGCAGAGAGGAAGAGCGACAGCGACTGT 1358
|| |||||||||||||| |||||||||||||| ||||| ||||| ||||
hk07213 1330 CCCTGAGCTAGAGGCCCCCTACAGCAGAGAGGAGGAGCGGCAGCGGCTGT 1379
P E L E A P Y S R E E E R Q R L S
1401 ----+----*----+----*----+----*----+----*----+----* 1450
D L Y H R L H A R L H S T S R P
mfj00394 1359 CAGACTTGTATCACCGCCTGCATGCTCGCCTCCACAGCACCTCCCGGCCC 1408
| ||| |||| ||||||||||||||||| ||||||||||||||||| |||
hk07213 1380 CGGACCTGTACCACCGCCTGCATGCTCGTCTCCACAGCACCTCCCGACCC 1429
D L Y H R L H A R L H S T S R P
1451 ----+----*----+----*----+----*----+----*----+----* 1500
L R L I Y H V A E K E T L L A W V
mfj00394 1409 CTGCGCCTCATTTACCACGTGGCTGAGAAAGAGACGCTGCTGGCTTGGGT 1458
||||||||||||||||||||||||||||| ||||| || ||||| |||||
hk07213 1430 CTGCGCCTCATTTACCACGTGGCTGAGAAGGAGACACTACTGGCCTGGGT 1479
L R L I Y H V A E K E T L L A W V
1501 ----+----*----+----*----+----*----+----*----+----* 1550
T S K F E L Y T C L S P L V T K A
mfj00394 1459 GACTTCCAAGTTTGAGCTCTATACTTGCCTCAGCCCCCTGGTAACCAAGG 1508
||| ||||| || ||||||||||| ||||||||||| ||||| |||||||
hk07213 1480 GACCTCCAAATTCGAGCTCTATACCTGCCTCAGCCCTCTGGTGACCAAGG 1529
T S K F E L Y T C L S P L V T K A
1551 ----+----*----+----*----+----*----+----*----+----* 1600
G A I L V V T K L L R W V R K E
mfj00394 1509 CTGGTGCCATCTTAGTAGTGACGAAGCTCTTGCGCTGGGTAAGGAAGGAA 1558
| ||||| ||||| |||||||| || ||| |||||||||| | ||| ||
hk07213 1530 CAGGTGCAATCTTGGTAGTGACCAAACTCCTGCGCTGGGTGAAGAAAGAG 1579
G A I L V V T K L L R W V K K E
1601 ----+----*----+----*----+----*----+----*----+----* 1650
E D R L F I R Y P P K Y S T P P S
mfj00394 1559 GAGGACCGGCTTTTCATCCGTTACCCACCCAAATACTCCACACCCCCATC 1608
||||||||||| ||||| |||||||||||||| ||||||||||| ||| |
hk07213 1580 GAGGACCGGCTCTTCATTCGTTACCCACCCAAGTACTCCACACCACCAGC 1629
E D R L F I R Y P P K Y S T P P A
1651 ----+----*----+----*----+----*----+----*----+----* 1700
T S A D Q A P N N G L F T G L -
mfj00394 1609 CACCTCGGCGGACCAGGCCCCCAACAATGGCTTGTTCACAGGACTCTG.. 1656
|||||| ||||||| || || | |||||||||||||| ||||||||
hk07213 1630 CACCTCTACGGACCAAGCTGCCCATAATGGCTTGTTCACTGGACTCTGAT 1679
T S T D Q A A H N G L F T G L *
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mfj00394 1657 ..................AACAACTGCTGGAGTGACCACATTTGGCTTTA 1688
| | |||||| | | || | |||
hk07213 1680 AGTTGGAGCTCCCAGACCAGGCAGTGCTGGGAGCAACCACCTTTGTTTTT 1729
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mfj00394 1689 AATACTGTGTCTACTCTGGAAATGTGGGTAGAGGTCTGTGCAGAGCTGGT 1738
| | ||||||| ||||||||||| || | ||| ||| || ||
hk07213 1730 TACCTTCTGTCTACCCTGGAAATGTGTGTGGGGGTGTGTCTGTGGCCAGT 1779
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mfj00394 1739 CCCCGTCTCCCTGGGCAGGTGGGCAAGATGTCAGGGTTTGCCCACAAATG 1788
| |||||||| ||| ||||||| | | ||| |||||| |||
hk07213 1780 CATTGTCTCCCTAAGCAATGGGGCAAGGTCTGAGG....GCCCACCGATG 1825
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mfj00394 1789 GGAGA.AGAGTGACAGCAGCCAGAGGCACAGGTTGCTCTCTGAGCCCCCT 1837
|||| | ||| |||| ||||| | |||| |||| || |||| |
hk07213 1826 AGAGAGATGGTGGCAGCCGCCAGGCGAGCAGGCTGCTTTCCCTGCCCAGT 1875
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mfj00394 1838 CATGCACCTCCATGTTTAGGAAAGT......GGGACACTTCCTCTGTCCT 1881
||||||||||| | | || || | | | || | || |||
hk07213 1876 CATGCACCTCCCCCTCTGGGGAAATCCTTAGGCCTCCCTCTCCCTTCCCT 1925
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mfj00394 1882 TTGCCTCACCTCCCTAACTAGCCTGAATGCCACTGTACCCTCCGTCACCA 1931
|| |||| |||| ||| || ||| || || |||| ||||
hk07213 1926 CTGTCTCATCTCCTCCACT....TGGATGATGCTCTAGCCTCTGTCAGGG 1971
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mfj00394 1932 GCTGTCTCCACCAAGCCTCTTCTAAGCAGCCCAGGTTGCTACCATGTCCA 1981
||||| || |||| | ||||| || || |
hk07213 1972 ACTGTCCCCTCCAAAC...................TTGCTTCCGTGGTCT 2002
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mfj00394 1982 TCTTCCAAGCAG.ACCTGAGACTGGGCTG..AGGCTCTCCTCAGGGTAGG 2028
| ||| || | | || || | | || | ||| || ||| |
hk07213 2003 GCCTCCTAGTTGAATCTCAGCCCTGAGTGTCCAGATCTGGCCAAGGT.GT 2051
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mfj00394 2029 GGTGGGTAACCCACAAGGGCTCTAGAATTTGGAATGCAGGGCTAGCCTGT 2078
|||| ||||| ||| || ||||| | | | |||||| || || |
hk07213 2052 CTAGGGTGGCCCACGGGGGTGCTGGAATTGGCACTTCAGGGCCAGGCTAT 2101
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mfj00394 2079 GCTTGAAACCAGCCTGGGTGTTTGAACACACACACACACACACACACACA 2128
||||| || ||||| | || | | |
hk07213 2102 GCTTGGGACTGGCCTGAGGGTAT.....................TTTAAA 2130
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mfj00394 2129 CACACACTGTACAGAAAGGGCCTAAAGCTGAAACCTTCAA.GACATTCCT 2177
| | | |||| ||| |||||||| | | ||| ||| || ||||||
hk07213 2131 GAAAAAAACTACATAAAAGGCCTAAAAGTAAGACCCACAAGGATATTCCT 2180
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mfj00394 2178 CTGTTCTTCATGCTCCCTCCGTCCCCATCATTTTTCCCTATCCCTACTTT 2227
|| |||| || | | |||| ||| || ||
hk07213 2181 TTGCCCTTCTTGTACTTT.......TTTCATCTTTACCCTGCC....... 2216
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mfj00394 2228 AAAGCAAACAACCCCCCAAAAGACTCAAGCCCCACCATGTTGGGCTGTTT 2277
|| || | || ||| || || ||||| |
hk07213 2217 ..AGAAATGACCCGCCCTCAATGCT.................GGCTGCTG 2247
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mfj00394 2278 CTTACACGAATAAGAAGGTGGCCTCCAGCATC.................. 2309
|| ||| ||| |||||||||||| ||| ||
hk07213 2248 CTAACATTAATGAGAAGGTGGCCTTCAGTGTCCACCTGTGGAACCCAGGA 2297
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mfj00394 2310 .....CACCTGACTTCATCCTTGGGCCGGGATGCAGCTTTGT......GA 2348
||||||||| || | ||| | || |||| || | |
hk07213 2298 CACAGCACCTGACTGCACACAGTGGCTGAAATCCAGCATTTTTACATAGG 2347
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mfj00394 2349 AGATGCTCTTAGCTGCCCA............................... 2367
|||||| |||||| | |
hk07213 2348 AGATGCACTTAGCCTCTAAGCCTCGTTTTACTCATCTGTGAAACAGAGAT 2397
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mfj00394 2368 AGTGTTCACTTTCTTCTGAACCTTTTAGTGGAGACCTGTAAACAAACGGA 2417
| | || ||| ||||| ||| || || ||| ||||| |
hk07213 2398 AAGTAACCCTCTCTCATGAACTCTTTGATGAGGATTTGT....AAACGAA 2443
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mfj00394 2418 CAGGGGTTGGAAATGTGTTGTGCTGATGCCTAGCATGAACA....TATTC 2463
| | | ||| | | ||| | | ||||| || | | |
hk07213 2444 AACAGACTCGAACTATTGTGTACCACCACATAGCACATGCACGTCTGTCC 2493
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mfj00394 2464 TGGACATTGAACGCTT.....ACAGTAACAACCTAA...AGAAGAGCCCT 2505
||| |||| | | | | | || ||||| || |||| |||
hk07213 2494 CAGACTTTGACAACCTGCACAAGACAAGCAGCCTAAAGCAGGAGAGACCT 2543
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mfj00394 2506 ........TAAAGAGCTTGTGCTCACAACC....CACCTCAACTTCTCAC 2543
| | | ||||| ||| ||| | || ||||| ||
hk07213 2544 CCCTAGGGTTTTGTGTGTGTGCACACTACCCTCACTCCCCAACTGGCCAT 2593
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mfj00394 2544 TACCTGGCTTCCAGCCCTCTTATAGAGACTCGGCCCTGTGGTTGCGCGCA 2593
|||| ||| || | || | | ||| | | |||
hk07213 2594 TACCCTAGTTCTGCCCTTGTTTGTGGAGTTACAGCCTCAAGGTTGTAGCA 2643
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mfj00394 2594 TGCGTGCAAACGCAAGCTAGCAGTTGCATTTGCAG.ATGTTCTGCGCTTG 2642
|| || ||| ||| | |||| |||||||||| ||
hk07213 2644 TGTGT..........GCTGGCAATCAGGGCCGCAGTGTGTTCTGCGCCTG 2683
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mfj00394 2643 CTCCAAGCAGACACCTG...................TGCCGCCCCGCCCC 2673
| | ||| ||| |||| || | | |
hk07213 2684 CCCAGAGCTGACTCCTGATTTAACCGCTGGCGTAACCGCGGGTTGCACGC 2733
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mfj00394 2674 CTGTTTTCCTACAATGTCTATAGTGGCACGTGCTGCCTTTCCCTGCTGTT 2723
|| | | | || | | |||||| | |||| | |
hk07213 2734 ATGCGTGCTGAAAAGCCTTTCACCCTCACGTGGTTTCTTTTTTAACCAGT 2783
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mfj00394 2724 TCTCTTCCGAGGCTCATGCGCAGATACCCCACGTTGGGAAATGGCTGCGG 2773
|| |||||||| |||||| ||| |||||| ||||||| | |
hk07213 2784 CATCAAGCGAGGCTCGCGCGCAG..GCCCTGCGTTGGAAAATGGCGGGGA 2831
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mfj00394 2774 AGCTGGAGCCTTTGATGGCGGAGTGGCTGGGAGCTGAGAAAGCTGAAGAC 2823
||||| | ||| ||| | |||| || | |||| ||||| ||
hk07213 2832 AGCTGAAACCTCTGAATGTGGAGGCGCCAGAAGCT......GCTGAGGAG 2875
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mfj00394 2824 ACCCGAGGTAGTGAAGG.........................CCAACAGG 2848
| ||||||||| || | | ||||
hk07213 2876 GCTGAAGGTAGTGAGGGCAAGTGGGCTGCACTCCTTTCTCTCCAACCAGG 2925
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mfj00394 2849 GTAGATGGGAAAGAGGCTTCGGCTCATTACGATAATTGAGAA........ 2890
| ||| ||| |||| |||| | |||||| ||||| | |
hk07213 2926 GCAGAAAGGAGGGAGGATTCGTCCCATTACAATAATGAAATAATGATATT 2975
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mfj00394 2891 .TTTTTTTTAGAAAAAAAGTTTTTAGCCTATTG...............AA 2924
| ||||| ||| ||| | || ||||| ||| ||
hk07213 2976 CTAATTTTTTTAAATAAAATGTTAAGCCTTTTGTTATTGAAGAAAAACAA 3025
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mfj00394 2925 ACTTATAAC..TTCCACAAAGTGGAAAAAAAAATAACATGCGTGTACTCA 2972
|| |||| ||| || ||||| | | ||| ||||| || | | || |
hk07213 3026 TTTTTTAACCGTTCAGCACAGTGG.AGATAAATTAACAGGCATATTCTTA 3074
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mfj00394 2973 TCACCTAGGTAAAC..TTGCCAACTTTATTG...ATCATATTAAATATCT 3017
||||| || | ||| ||| ||||| || || | | || || |
hk07213 3075 TCACCGAGATTAACTTTTGTCAACTGTAGTGTATACGTTGTTGAAAGTAA 3124
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mfj00394 3018 TAAGCAAGTAGTTCAAGACCCATTACTCAGCAAGTCAGGGGGAGGGGAGG 3067
| || |||||||| || | || | || ||| || ||
hk07213 3125 ACAACATGTAGTTCAGTACGAAAGTCTTCAAACAAAAGTGGGGCGGTGGG 3174
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mfj00394 3068 GGAGGATAATGATGTCCTCCCAA.AAGGTCTCTGTCGCTG.CACAGCTGA 3115
||||| ||| || || | || || | ||| || |
hk07213 3175 ..........GATGTTCTCATAACAATCACCGTGCTGCAGCCACCCCTTA 3214
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mfj00394 3116 GGGAAGGATCTTCTCGGT.....CACTTCACAGCCAGCCTACATCACTAC 3160
| | ||| | || || |||||| | | | | || ||
hk07213 3215 TTAACAGTAATTCCCAGTGTCGCCATTTCACACCTAACACATATGACACT 3264
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mfj00394 3161 TTTTGGGTTTCTCGGGGCTC....TTGAGCACGGCTTTCCCC....GGTT 3202
|| || ||| ||| | || || ||| | |||| |
hk07213 3265 TTGATGGACTCTTAAACCTCCTAATCGAACATGGCCTCCCCCACAGCCTC 3314
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mfj00394 3203 TTGTCCGATTTGGTTTGACTTTTAGTAATGACAGTTTCTCTTCCTCATTG 3252
|| || | ||||||| | | | || |
hk07213 3315 TTTTCTCCAGGGTATTGACTTGAATGACAGGCA............AAGGA 3352
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mfj00394 3253 GGGTCAAGGAAGTGGAGTCCAGCCTAGAAACTACTGGAAATTGCAGTTCC 3302
|||| || || | ||||||| ||| ||||||||| | | |
hk07213 3353 GGGTGGAG.....GGGTGTCGGCCTAGACACT..TGGAAATTGTATTCCA 3395
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mfj00394 3303 TTGGAAAGAAAATATCTCTCATGGTAAATTCACTAGAAGAGCATTCTTGT 3352
| |||||||
hk07213 3396 TCCAAAAGAAA....................................... 3406
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mfj00394 3353 TTTAATTATAGAAAATTTCTAACCATTCTAAAGTAGAGAAAATAGTGTGA 3402
| ||||| || || |
hk07213 3407 .........AAAAAATCTC........................AGGCCGG 3423
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mfj00394 3403 CCAAGGACCCTGACCCTGCTTCAACGGGTGTTCAATCTTTGTCCTTGTAT 3452
|| ||| || || | | |||| | |||
hk07213 3424 GCACGGAGGCTCACGCCTGT.............AATCCCAGCACTT.... 3456
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mfj00394 3453 CTGTCTCCACCTCCCCTTCCTGCACACCCAGCCCGTCACTACATGGCCAA 3502
| | || || | | || || |
hk07213 3457 ...................TGGGAGGCCGAGGCGGGCAGATCACGAGGTT 3487
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mfj00394 3503 ACAGGGGAGGTGGCATCTTGCCAGACCTGTTCACTCAGATTCCAAAACAA 3552
| | | | || | || | || || | | || || | ||
hk07213 3488 AGGAGTTCGAGGCCAGCCTGACCAACATGGTGAAACACCATCTCTACTAA 3537
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mfj00394 3553 TGAATGTGACCTTCAAGAGCAAGACCCACAGTTTCCCTGGGCACCTGAAA 3602
||
hk07213 3538 AAAA.............................................. 3541
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mfj00394 3603 CACCTGCCTGGTGCTTGGCACTCAGTGACCTTTCCTTTTCCTTTTCCTTT 3652
| | | | | | | | |
hk07213 3542 ..............................CTATATATACATATACATAT 3561
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mfj00394 3653 TCCTTTTCCTTTTTTTTTTTCTTCTTTTTTGTGGGTGAATATTGAAATCA 3702
| | | | ||| | | | | | | || ||| | | | ||
hk07213 3562 GTGTGTATGTGTATTTATATGTATGTATGTATGTGTGTGTGTATATATAT 3611
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mfj00394 3703 TTTTAACAGAATTTGTCTTAAATTGGAGTCACATGTCGGGTGTCAGTTTT 3752
| || | || ||| | | | | | ||| | | |
hk07213 3612 ATATATATGTATATGTGTATATATATATATATGTGTATATATATATATAT 3661
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mfj00394 3753 CAAAGAATAGAAATCAGACAAGTTGCATTTTATGACCCACGCGGTACAGT 3802
| | | |||||| | || || ||
hk07213 3662 ATACACACACTAATCAG......................CCGGGCACGGT 3689
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mfj00394 3803 GCCGCAGAGATGTAAACATTTAGCTTCAACCTTTCAAATTCCTCAGTTTA 3852
| | | ||||| | |
hk07213 3690 GGTGTGGGCCTGTAATC..............................GCA 3709
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mfj00394 3853 AGTAATCAGGGACTTCATTGGCCCGGGAGGAAGGCAGAAGACGAATCAGG 3902
|| ||||| | | |||| ||
hk07213 3710 GCTACTCAGGAAGCT...........GAGGCAG................. 3731
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mfj00394 3903 TCACATTTCTTCGCCACTGACTGGCCATAGGGGGGATGCTCTGCAGCCCC 3952
| || | || | |||
hk07213 3732 ................................GAGAATCACTTGAACCCG 3749
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mfj00394 3953 AGTGGCCTTCTGGTAGGGGCTTGCGGTTTTCAGCAGATGCTGTTCCACAT 4002
|| ||| || | |||| || | | |||| ||| |
hk07213 3750 AGAGGC.........GGAGGTTGCAGTGAGCCG.AGATCATGTCACTGCA 3789
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mfj00394 4003 CTGCAATCTCCATGCTAGGTCATCACAGGAGACAGACTGCACGAGCGTGG 4052
|| || || || |||||| ||
hk07213 3790 CTCCAGCCT.................GGGTGACAGAGTG........... 3811
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mfj00394 4053 ACCAGGGGTGGCCAGTGGTGTGTTACTAACAGGCAGAGAGAGAAGAATTG 4102
hk07213 3812 .................................................. 3812
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mfj00394 4103 AATCCAAAACCTGACCAAATCTAGGTATATCCATGCAGATTGTAGATTTT 4152
||| |
hk07213 3812 ...........................................AGACTCC 3818
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mfj00394 4153 TTTTAAAAATAAGAGGTGGAGAAATTTAAATTTCAGTTGATAAAATTGTT 4202
| | |||| || |
hk07213 3819 GTCTCAAAAGAAAA.................................... 3832
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mfj00394 4203 TATCAAAATTGTTCATAAGAGGTGGGCCCTAGGAGTTTTGTTTTTATTAT 4252
|||||| | | | | | | || || | || | | | ||
hk07213 3833 ....AAAATTCTCCCTTGGCCGGG....CTTGGTGGCTTATGCCTGTAAT 3874
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mfj00394 4253 TGAATATCAAGATTGAAACGAGAAAGGCGGGGATGTACCTGGCAAGGGCA 4302
| | ||| || | | | || | ||||| | |
hk07213 3875 CCCA...GCACTTTGGAAGGCCGAGGCGGGTGGGTCACCTGAGGTCAGGA 3921
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mfj00394 4303 GCTCTAGAATGGCCTGAGGTAAGCACACTGATAATTATGAAGAGGGGCCT 4352
| | ||| ||||
hk07213 3922 GTTTGAGACCAGCCT................................... 3936
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mfj00394 4353 TGGATTTGTGGGAGGGGAGCAAAGTGGAGGCCTTCGTGATGTATTATTTT 4402
|||| | || | | | |
hk07213 3937 ............................GGCCAGCATGGCGAAACCTCGT 3958
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mfj00394 4403 ATTTATCTCTTAGAAAATTGGTAGTGATACGTAATTTACAATGTAAGAGG 4452
| || | | ||| || |
hk07213 3959 CTCTA.............................CTAAAAATACAAAAAT 3979
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mfj00394 4453 TCAAGGGGAAACTGAGCAGCAGCCCGAGGGACCAATGCTAACACCCAGAT 4502
| ||| || | |||
hk07213 3980 TGTCCGGGTGTGGTGGCGGGCGCCT......................... 4004
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mfj00394 4503 TTTAAGTTATGCCAGTACCTGGAGCCCCCGTATAATGGGAAATGTGCACT 4552
|| | |||| |||| | | | | ||||| ||
hk07213 4005 .....GTAGTCCCAGCTACTGGGGAGGCTGAGGCAGGGGAATTG...... 4043
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mfj00394 4553 GGAGTATTCAGGACTAGTGGGTCATACTATGTACAACTTAGAGATGACAA 4602
|| | | | || | ||| | || | | | |
hk07213 4044 .....CTTGAACCCGGGAGGCAGAGGTTATCGTGAGCTGACATTGCGCCA 4088
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mfj00394 4603 ACACTCAACACATGGAGATGCCGATAGAGTACCACAGCCTATTTCTATGA 4652
| | || | | | || |||
hk07213 4089 CTGCACTCCAGCGCGGAAGACAGAGTGAGC.................... 4118
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mfj00394 4653 CTTTTGTGTACATCTGAAACAATTTCAAAATAAAATGTTATATGGGGGAA 4702
hk07213 4119 .................................................. 4119
4951 --- 4953
mfj00394 4703 CTT 4705
hk07213 4119 ... 4119