Comparison of KIAA cDNA sequences between mouse and human (KIAA1152)
<<Original sequence data>>
mouse mKIAA1152 (mfj00269) length: 4311 bp, CDS: 1 - 1503
human KIAA1152 (hh00415) length: 6256 bp, CDS: 60 - 1124
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 15 - 59 33 12 26.7
CDS: 60 - 1124 900 137 13.2
3'UTR: 1125 - 6274 1533 1739 53.1
amino acid
CDS: 60 - 1124 311 44 12.4
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mfj00269 1 ..............ACGGCCCCGAAGGCGGCGCCGGGTGCAAGCGACTGC 36
|||||| || |||||| | | || | | | ||||
hh00415 1 CCCGGCGGTGAGAGTCGGCCCAAAAAGCGGCGGCCGTTGGAGGTGGCTGC 50
51 ----+----*----+----*----+----*----+----*----+----* 100
C G L M D E L V H D L A S A
mfj00269 37 GGCAGCCGATGCGGCCTCATGGATGAGCTAGTGCATGACCTGGCCTCAGC 86
|||||| |||| ||||||||||||||||| || || ||| | ||||||||
hh00415 51 GGCAGCTGATGTGGCCTCATGGATGAGCTGGTACACGACTTAGCCTCAGC 100
C G L M D E L V H D L A S A
101 ----+----*----+----*----+----*----+----*----+----* 150
L E Q T S E Q S K L G E L W E E M
mfj00269 87 CTTGGAGCAGACATCGGAGCAGAGCAAGCTTGGTGAGCTGTGGGAGGAGA 136
||||||||||||||| ||||||| ||||||||||| |||||||||||||
hh00415 101 CTTGGAGCAGACATCTGAGCAGAATAAGCTTGGTGAACTGTGGGAGGAGA 150
L E Q T S E Q N K L G E L W E E M
151 ----+----*----+----*----+----*----+----*----+----* 200
A L S P R Q Q R R Q L R K R R G
mfj00269 137 TGGCCCTGAGCCCCAGACAGCAGAGGCGGCAGCTTCGCAAACGCCGAGGA 186
|||| ||||||||| |||||||||||||||||||||| |||||||||||
hh00415 151 TGGCGCTGAGCCCCCGACAGCAGAGGCGGCAGCTTCGGAAACGCCGAGGT 200
A L S P R Q Q R R Q L R K R R G
201 ----+----*----+----*----+----*----+----*----+----* 250
R K R R S D F T H L A E H A C C F
mfj00269 187 CGGAAGCGCCGGTCTGACTTTACTCACCTGGCAGAGCACGCCTGCTGCTT 236
|||||||| || |||||||| ||||||||||||||||| |||||||||
hh00415 201 CGGAAGCGTCGTTCTGACTTCACTCACCTGGCAGAGCATACCTGCTGCTA 250
R K R R S D F T H L A E H T C C Y
251 ----+----*----+----*----+----*----+----*----+----* 300
S E A S E S S L D E A T K D C R E
mfj00269 237 CAGCGAGGCCTCTGAGTCAAGTCTGGATGAAGCCACCAAGGACTGCCGAG 286
|||||||||||||||||||||||||||||| ||||| |||||||| ||||
hh00415 251 CAGCGAGGCCTCTGAGTCAAGTCTGGATGAGGCCACTAAGGACTGTCGAG 300
S E A S E S S L D E A T K D C R E
301 ----+----*----+----*----+----*----+----*----+----* 350
V A P L T N F S D S D D T V V A
mfj00269 287 AAGTGGCTCCGCTCACCAACTTCAGTGACTCTGATGACACGGTGGTGGCC 336
||||||||||| | ||||| || ||||||||||||||||| |||| |||
hh00415 301 AAGTGGCTCCGGTGACCAATTTTAGTGACTCTGATGACACAATGGTAGCC 350
V A P V T N F S D S D D T M V A
351 ----+----*----+----*----+----*----+----*----+----* 400
K R H P A L S A I I R G K Q H S W
mfj00269 337 AAACGGCACCCAGCTCTCAGTGCCATCATTAGGGGTAAGCAACATTCTTG 386
||||| ||||||||||||| |||||| | | | ||||||||||||||||
hh00415 351 AAACGACACCCAGCTCTCAATGCCATTGTCAAGAGTAAGCAACATTCTTG 400
K R H P A L N A I V K S K Q H S W
401 ----+----*----+----*----+----*----+----*----+----* 450
P E S D S F T E N A P C R P L R R
mfj00269 387 GCCCGAGTCTGACTCCTTTACGGAAAACGCACCTTGTCGACCCCTCAGGC 436
|| || |||||||||||||| ||||| |||||||||||||| |||||||
hh00415 401 GCATGAATCTGACTCCTTTACTGAAAATGCACCTTGTCGACCACTCAGGC 450
H E S D S F T E N A P C R P L R R
451 ----+----*----+----*----+----*----+----*----+----* 500
R R K V K R V T S E V A A S L Q
mfj00269 437 GCCGGCGGAAGGTGAAGCGAGTGACGTCCGAGGTGGCTGCCAGCCTTCAG 486
|| |||||||||||||||||||||| || ||||||||||| |||||||||
hh00415 451 GCAGGCGGAAGGTGAAGCGAGTGACATCAGAGGTGGCTGCTAGCCTTCAG 500
R R K V K R V T S E V A A S L Q
501 ----+----*----+----*----+----*----+----*----+----* 550
Q K L K V S D W S Y E R G C R F K
mfj00269 487 CAGAAGCTGAAAGTGTCAGATTGGAGCTATGAGAGAGGCTGCAGGTTCAA 536
||||||||||| ||||||||||||||||||||||||||||||||||||||
hh00415 501 CAGAAGCTGAAGGTGTCAGATTGGAGCTATGAGAGAGGCTGCAGGTTCAA 550
Q K L K V S D W S Y E R G C R F K
551 ----+----*----+----*----+----*----+----*----+----* 600
S A K K Q R L S R W K E N T P W T
mfj00269 537 GTCTGCCAAGAAGCAGCGTCTATCCCGCTGGAAGGAGAATACTCCCTGGA 586
|||||| |||||||||||||| ||||||||||||||||||||||||||||
hh00415 551 GTCTGCTAAGAAGCAGCGTCTGTCCCGCTGGAAGGAGAATACTCCCTGGA 600
S A K K Q R L S R W K E N T P W T
601 ----+----*----+----*----+----*----+----*----+----* 650
S S G H G L C E S A E N R T F L
mfj00269 587 CCTCATCTGGCCATGGGCTGTGTGAATCAGCAGAGAATCGGACTTTCCTA 636
||||||| ||||| || |||||||||||||||| ||| |||||||||||
hh00415 601 CCTCATCAGGCCACGGATTGTGTGAATCAGCAGAAAATAGGACTTTCCTA 650
S S G H G L C E S A E N R T F L
651 ----+----*----+----*----+----*----+----*----+----* 700
S Q P G R K E R M E C E A E E Q K
mfj00269 637 AGCCAACCAGGAAGGAAAGAAAGGATGGAGTGCGAAGCCGAAGAGCAGAA 686
||| || ||||||||||||||||||||||||| ||| | || || || ||
hh00415 651 AGCAAAACAGGAAGGAAAGAAAGGATGGAGTGTGAAACAGATGAACAAAA 700
S K T G R K E R M E C E T D E Q K
701 ----+----*----+----*----+----*----+----*----+----* 750
H G S D E N M S E C D T S S V C S
mfj00269 687 GCACGGCTCTGACGAGAACATGTCCGAGTGTGACACTAGCAGTGTGTGCA 736
|| |||||||| ||||||||||| || ||||| || ||||||||||| |
hh00415 701 ACAGGGCTCTGATGAGAACATGTCAGAATGTGAAACCAGCAGTGTGTGTA 750
Q G S D E N M S E C E T S S V C S
751 ----+----*----+----*----+----*----+----*----+----* 800
S S D T G L F T N D E G R Q G D
mfj00269 737 GCAGCAGTGACACGGGGCTCTTCACCAATGATGAAGGACGACAAGGGGAT 786
||||||||||||| |||||||| |||||||||||||| |||||||| |||
hh00415 751 GCAGCAGTGACACTGGGCTCTTTACCAATGATGAAGGGCGACAAGGTGAT 800
S S D T G L F T N D E G R Q G D
801 ----+----*----+----*----+----*----+----*----+----* 850
D E Q S D W F Y E G E C V P G F T
mfj00269 787 GATGAGCAGAGTGATTGGTTTTATGAAGGAGAATGTGTCCCCGGATTCAC 836
|| || |||||||||||||| |||||||||||||||||||| ||||||||
hh00415 801 GACGAACAGAGTGATTGGTTCTATGAAGGAGAATGTGTCCCAGGATTCAC 850
D E Q S D W F Y E G E C V P G F T
851 ----+----*----+----*----+----*----+----*----+----* 900
V H N L L P K W A P D H C T E V E
mfj00269 837 TGTCCATAACCTTCTGCCCAAGTGGGCTCCTGATCACTGCACTGAAGTAG 886
||||| ||| |||||||||||||||||||||||||| || |||||||||
hh00415 851 TGTCCCTAATCTTCTGCCCAAGTGGGCTCCTGATCATTGTTCTGAAGTAG 900
V P N L L P K W A P D H C S E V E
901 ----+----*----+----*----+----*----+----*----+----* 950
R M D S G L D K L S D P T F L L
mfj00269 887 AAAGGATGGACTCCGGCCTGGATAAACTCTCAGACCCCACGTTCCTTTTA 936
|||| ||||| || || |||||||| | ||||| |||| |||||||||
hh00415 901 AAAGAATGGATTCTGGATTGGATAAATTTTCAGATTCCACATTCCTTTTA 950
R M D S G L D K F S D S T F L L
951 ----+----*----+----*----+----*----+----*----+----* 1000
P S R P A Q R G Y H G R L N R L P
mfj00269 937 CCTTCCCGGCCAGCTCAAAGAGGATACCATGGTCGTCTGAATAGGTTGCC 986
||||| ||||||||||||||||| |||||| ||| ||||| | | ||
hh00415 951 CCTTCTCGGCCAGCTCAAAGAGGGTACCATACTCGCTTGAATCGTCTACC 1000
P S R P A Q R G Y H T R L N R L P
1001 ----+----*----+----*----+----*----+----*----+----* 1050
G A A A R C L R K G R R R L P G K
mfj00269 987 AGGAGCTGCAGCTCGTTGCCTCAGGAAGGGGCGGAGAAGGCTGCCTGGGA 1036
|||||||||||||| |||||||| |||||||| ||||||||| |||||
hh00415 1001 TGGAGCTGCAGCTCGATGCCTCAGAAAGGGGCGAAGAAGGCTGGTTGGGA 1050
G A A A R C L R K G R R R L V G K
1051 ----+----*----+----*----+----*----+----*----+----* 1100
R R A * A A
mfj00269 1037 AG.............................GAGGCGAGCATGAGCAGCC 1057
|| | || ||| ||
hh00415 1051 AGGTGATACCTCTCACAGTTAGCTTGGCTCAGTGGGGAGATAATATTCCC 1100
V I P L T V S L A Q W G D N I P
1101 ----+----*----+----*----+----*----+----*----+----* 1150
W G R R G S A I
mfj00269 1058 TGGGGACGGAGAGGATCGGCCATACCATCAG................... 1088
| || | | | ||| || |||||
hh00415 1101 TATGGGAGTTGTGTATCCTATTAACAATCAGAGGTGCTACAGAACTCCCT 1150
Y G S C V S Y *
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mfj00269 1089 .................................................. 1089
hh00415 1151 GAAGTTAATGGAGCCAACTGGAATGTGTTGGGAGTTTACAAGAGTGAACA 1200
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mfj00269 1089 ..........TGACCCCCGGCAGACAGATTTCTGGTTACCATCAGCTGGG 1128
|| | | ||| || | | | | |
hh00415 1201 TTATGTAGAATGTGAATGGATATACAAATAAAAGATGAAACGTAATTCAT 1250
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mfj00269 1129 AAAAGAGAACGGAATCAGTTTAATCCACTCTC....CCCTCTTTACTCCC 1174
| | || || || | || |||| || | | | || | ||
hh00415 1251 ATAGAAGTACTGACAAAAAAAAAAACACTGTCATTACAGTGTCTATTGCC 1300
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mfj00269 1175 TG.................GACGTTCTTGCTGATGCTTCTCATCGAAG.. 1205
|| | || | ||| ||| | || | |
hh00415 1301 TGTAAACCTACAAGCCTGAGCTGTGTCTTCTGTAACTTTTGATTAATGTT 1350
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mfj00269 1206 .............................GTGCTCACCTGCACACTGCTC 1226
|| | | ||| |||
hh00415 1351 ATGTTATTATTGTGTAAGTTAAAATACTCTTGGCTTCTTTATGACTCCTC 1400
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mfj00269 1227 TGCCAGGCAGGCAAG.............TGTACACTGGGGACCACCATGT 1263
| | || | | | | | | || | |||
hh00415 1401 TTGAATTCATGAATGCATCTTTGTTCTTTCCTAATTTTGGTCTTTCATCC 1450
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mfj00269 1264 CCACGTGACATTAAGAGGAAACGGAAACCTGT.....GGCCTCAGCATCT 1308
| | || | ||| ||| |||| | ||| | |
hh00415 1451 TAGAATTCATTAAAAAAAAAAAACAAAACTGTTACTGAGTTTCAAGAGCC 1500
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mfj00269 1309 TTTTCTAGCCCTAG.............TCCAGTGCACCCAGATGTTCTGG 1345
| || | || | | | || | ||| | | |
hh00415 1501 CCTCCTTGGCCATGAGGGAGAACTATCTGCTGTTTATTCAGTTCTGCCTT 1550
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mfj00269 1346 AGCCGGCCAT...........CCCAGCTCA..GAAGCCTCCTGACTCCGA 1382
||| | || | ||||||| || ||| | | |
hh00415 1551 TGCCAGGGATGGTACTAGGGACTCAGCTCATTTAATCCTTCCAGCAACCT 1600
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mfj00269 1383 GTGGTTGGACGGGACCTCTGCAGCAGAGAAAGCCACTGCCTTTCCTCCAG 1432
| | | | || |||| ||| || | | |
hh00415 1601 ACAAGGGCAAGCACCTTCAGCAGATGAGGAAAACTTAGGTTCGAAGAAGT 1650
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mfj00269 1433 CCACGTTTTTCAAAATGCCACAGGAAAAGAATTCTGG..CTGCAGCTCTA 1480
| | | || | | || | |||| | | | | |
hh00415 1651 TAAGGAATGTCTGATGTTACCCAGATAGGAATGGTAGAATAGAGATTTGA 1700
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mfj00269 1481 GCCCAGGAACCAATGGGTGTTGAAAC.TTTGTATTGTACAGTCTTAGTGT 1529
|||||| | | || || ||| ||||| | | || |
hh00415 1701 ACCCAGGTCTACTTTTATCTTTTTACATTTTTATTGAATTTTATTTTTTA 1750
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mfj00269 1530 TCTGATTGGCAGTCTTGGGCCTAATGCCACAAGGACTGACTCCTCGTCAC 1579
| | || | || ||| ||| | ||| || |||
hh00415 1751 CTCTACTTTGAGATTGAGGAATAA...ATTAAGACAGGGCTCATCCTCAG 1797
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mfj00269 1580 GCACAGCAGTTGCTCTTTCTTTGAGAAAATATTTGGGGAA.......... 1619
|| || || || | | |||| | ||| |
hh00415 1798 TCAGAGAAGATGGTGGTGGGCAAAGAATAAGGAAGGGAGAGGCATTGAGA 1847
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mfj00269 1620 .................................................. 1620
hh00415 1848 GCATTAATTTGTTTGTTCACTTGGTAAGCATTTAGAATGCCTGCTAGGTG 1897
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mfj00269 1620 .................................................. 1620
hh00415 1898 GCACAATATGTGCCACAGTCTGGCTTCCCTTAAGGGGATACTGTTTTATA 1947
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mfj00269 1620 .................................................. 1620
hh00415 1948 GTCTGACCAGGGAACAGTTTTCTGAAGTTTTAAGCATGCAAAAGAAATGA 1997
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mfj00269 1620 ....................................TCTTTTTTTGTAAA 1633
||||||| | | |
hh00415 1998 GACTGTTTATTTCCAGACGAGCCCAAGATTCTTATTTCTTTTTATCTTTA 2047
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mfj00269 1634 ATATCAATTT........................................ 1643
| |||| ||
hh00415 2048 AATTCAAGTTCAAATCTTTTTTTTTTTTTTGAGATGGAATCTCGCTCTGT 2097
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mfj00269 1644 .......TCCTTAAGTGGGTGGGGCACCCTCTGCTGTC...CCCTTCCTT 1683
| || ||| || ||| ||| | ||||||
hh00415 2098 GACCTAGGCTGGAATGCAATGGTGCGATCTCGGCTCACTGTAACTTCCTG 2147
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mfj00269 1684 CGTTGCTCGCCCA..CCATTCACCTTCAGCTGCTGCC............. 1718
| || | | || | |||| ||| | | || ||
hh00415 2148 CCTTCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGA 2197
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mfj00269 1719 TTAGAGCTGCCTCTCCTTGGC.AGCTGTGTCTTTGTTCCTGAAAATCTAG 1767
||| || ||| | || || | ||| | ||| | | | | ||
hh00415 2198 TTACAGGCGCCCCACCATGCCTGGCTAATTTTTTTGTATTTTTAGTACAG 2247
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mfj00269 1768 CAACAGCTTTTGCGTACCTTCTGTGTAGAGCTTTTCATGTCGCTGA.... 1813
| ||| | | || | | | ||| | ||||
hh00415 2248 ATGGGGTTTTACCATGTTGGCTAGGCTG...GTCTCAAACCCCTGACCTC 2294
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mfj00269 1814 .................................................. 1814
hh00415 2295 AGGTGATCCACCCGCCTCGGCCTCCCAAAGTTCTGGGATTACAGGCATGA 2344
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mfj00269 1814 ......................TGAAATCCTAAATTTGCAGCCAGTT... 1838
| ||||| | |||| | || || ||
hh00415 2345 GCCACCGTGCCCGGCCTCAAGTTCAAATCTTGAATTAGAAGACATTTGAT 2394
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mfj00269 1839 .......................................GGAAACACGTT 1849
| || ||| |
hh00415 2395 TATTGGAAAACTGATACCTTTCAAATTACTCATTTTACAGACAAAACGCT 2444
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mfj00269 1850 GCT............................................... 1852
|||
hh00415 2445 GCTTTTTCTGTTTTGGGAGCTTATTGTTAACAGGGATAGCTAGCAGAATA 2494
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mfj00269 1853 .....................GGATGGGATTGTGTCTGTGCAGTAAGGCT 1881
||| || || | | | |||||
hh00415 2495 GCAGTACATGGGGTGGAAGAAGGAGAGGTTTTACTTTTATTGTTTAGGCT 2544
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mfj00269 1882 GGCCATCGA...GTCTCCATCCCCTCAGGACCAGTAAGAGACAGCAACCA 1928
| || | || || | || | | | | |||| |
hh00415 2545 TGACAGATAATGTTCCCCCTGCCACCTGTGTTACTTTCTTTCAGCTCTTA 2594
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mfj00269 1929 AGTTCTCAGCTTAGGGCCCCAGAAGAGACACCAGCAGGATGGCGTGGGAG 1978
| || | | | || || || | | | ||
hh00415 2595 TAAAATAAGAGCCATCCACTTCCATGGAAACAAGTCACTTTATCTTGAAG 2644
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mfj00269 1979 CCTTCCCTTGCCTGCACATGGTCTGAGGGGATCGCCAGCGG......... 2019
||||||| | ||| | | || ||| | |
hh00415 2645 GTTTCCCTTTAGCTTGCCTGGAAGGGAGTGAGGGCCTGTTGGATGTGCCT 2694
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mfj00269 2020 .................................................. 2020
hh00415 2695 TTAATGATTTCAAATGAATAGGATAATATTTACTTGTTTAATTCATCTTC 2744
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mfj00269 2020 ....................CTCCATTGTACCTGACCTCAGCCTCCTGCT 2049
|| || || || ||| | ||||
hh00415 2745 ATCACCTTAAAGGGATATTTATCATTTCTAGAAGAGGTCACCGCTCTGCC 2794
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mfj00269 2050 CAGTGTTCTCCC...................................... 2061
| | ||||
hh00415 2795 CCCCTTCTTCCCCCTCCCCCATCTCTCTTCTGCTTTTCTAAATTGTAATC 2844
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mfj00269 2062 .......................GATAGGGCCCAGAGGTCTGTGTGCTCC 2088
| | |||| | ||| | |
hh00415 2845 ATAAATAATGAGTTTCATTCACAGCTCCCTGCCAGTGAGCTGCTAATTAC 2894
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mfj00269 2089 AGTGCAGATGGGGGTTTAGGTGCTCGGCA..AACTAGTGGATGATGTGCT 2136
| | | | | | | | | | || || || |
hh00415 2895 ACAAAGTACTGCTTGTAATTTACACAGTAATAAACTGTAAATTTAAACAT 2944
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mfj00269 2137 GACCCCAGCCTAAGGCTTTATCTCCTAAGTGGAATTTCACTGTTAGTATT 2186
|| || |||| || | | | | | | | | | ||
hh00415 2945 TACGGCACTTTAAGTTAATAATTTTTCTGCTGTAACAAATAGCTCATTTT 2994
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mfj00269 2187 TTAGAGGTCGGTAACC.................................. 2202
| | || | ||
hh00415 2995 TCACCCATCTTTTCCCTTGGCCCCCCTACCATGTCTGTCTGTGACCAGGA 3044
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mfj00269 2203 .................................................. 2203
hh00415 3045 GGCATAGCTATAAGAAATGCAGAACATGAAGAATATAGTATATGAAAACT 3094
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mfj00269 2203 ...........................................AGTGGTA 2209
| | |
hh00415 3095 TCTCATTTAACTCCACTACCGCCCGGACTCTGACCTCAGAGTAATTTTTC 3144
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mfj00269 2210 AGCAGAAACTCCTGCTCTTATCTGTTATGTAATGGTTAGTTGGGGCCA.. 2257
||| | | ||||| || ||| | ||| |||| || |||
hh00415 3145 TACAGCCAGTTCTGCTGAAATGTGTAGCCTGATGTTTAGCACGGTCCACA 3194
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mfj00269 2258 ..........................TGGTTTAGGAAGAAACGATGTCTT 2281
|| || | ||| | | | ||
hh00415 3195 CACATAGATGAATATAGACACAAATGTGTTTGAAGAACAGCCTTGATGTT 3244
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mfj00269 2282 TTTGACATGCCTTTCTATGTGGTGTGTT...................... 2309
||| ||| | | || ||||||
hh00415 3245 CTTGGCATTCACGCCCGTGACTTGTGTTCTCTCAACACAACAGTTACTCA 3294
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mfj00269 2310 ............TATGACCGCTCAGCTGCAAGTACAGTTGTGTATATAGT 2347
|||| | ||| ||| | || | | || |
hh00415 3295 GATGTGTGTTGGTATGCTTTCCCAGGTGCCATGGTAGGTAAGCATTGTGA 3344
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mfj00269 2348 TGTGCCCGAAGTTGA.....................TGCTACTTTGTCAA 2376
| ||||| | | | | ||| | |
hh00415 3345 ATGTACTCAAGTTAAATGAAGAGTGAATTGCCGTTTTCCAATTTTTTGGA 3394
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mfj00269 2377 GGTGAGGAGGAAGTGAGTGCCTGGAGCTGCTGGGGAAGAGCCACATTTCC 2426
|| | ||| | | | | || | || |||
hh00415 3395 AATGGTTCGTTTCTGAACTCTTTGTGGTGTTATGGGTAAGC.......TT 3437
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mfj00269 2427 CAAAAGTGTCATCTGGAGCACCTGCCATTCAGGGCTGTGCTTGACACAGC 2476
| | | | |||| ||| ||| ||| ||| | || | |||
hh00415 3438 TTACACTATAATCTTGAGAACCCTGAATTTAGGAATCAATTTTATACAAA 3487
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mfj00269 2477 TCTCTCTTTTTGTATC.................................. 2492
| ||| ||||| | ||
hh00415 3488 TTTCTATTTTTATTTCATGAGATGATGTTTGAGGGACAAAGTACAGAGTA 3537
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mfj00269 2493 .................................................. 2493
hh00415 3538 ACAATTTTTGCAAGTCACAAAATTCTCTTGATGTATTTATATTTAGTCAG 3587
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mfj00269 2493 .................................................. 2493
hh00415 3588 CAGATATTTACATTTTACCAGTGAGGATTTGGTAATGTCCCAGGATGAAG 3637
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mfj00269 2493 .......................................AGCTGAGTGTG 2503
|||| |||||
hh00415 3638 GCTGTTGGAACTATAATCAAATCACGTAGCTCTCTAGGAAGCTTGGTGTG 3687
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mfj00269 2504 TT.GACTGTGAAACACATGGTAGCGTTG...................TTA 2533
|| | |||| ||| | | || |||| ||
hh00415 3688 TTGGCCTGTTAAAAATTGGCTACTGTTGAACTTTCTAAAAAAGGATTTTT 3737
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mfj00269 2534 AATGCTCGCTGCCTTGGTCATGTCAGAGAGAAAAACCTCTCCTTAAGACA 2583
| | || | | | || | ||| ||| | | || |||| | |
hh00415 3738 ACTCCTATATACTTCAGTAGTTACAG.GAGGTATAGTACTTATTAAAATA 3786
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mfj00269 2584 GCTAGCAGGTGATCCGGTGCGTCCTCTCCCTGAAGGGTCATTATCCCTCC 2633
| | | | ||| | | | | | | | |
hh00415 3787 CCATATATGGTGAACAGTGTCTATGATGTATTTATAAAGACTTTTGGATC 3836
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mfj00269 2634 CAGGGAGTGTAAGCAGTGTGTTCCCCCGAGAGCTACATTCATTTGGGAGG 2683
||| ||| | ||| | | ||| || | |||
hh00415 3837 ACTAGAGAATAATAAATGTAGGGTAACATGTAATACTTTTAAGATGGATT 3886
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mfj00269 2684 CCACT......................................CTGTGAC 2695
||| | | | ||
hh00415 3887 CCAATAAAAAGAAGTATAGTTGCTGTTTTATTTTAAGATTGACTTTTAAC 3936
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mfj00269 2696 TCTTCAGCAGTGAGGTGGGC..AGGGGCCAGAATGTGAGTCTGTTTGCAA 2743
| |||||| | | || | || | | | | |
hh00415 3937 ATGTGCCTTTTGAGGTTGCCTTAGCTGGCACAGTTATGGGAAAGATTGAT 3986
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mfj00269 2744 AGGGAAGCCTGAAGCTCGGTGGCTGAGAATGTATCA...GCTGACCATAA 2790
| | | | | | || ||| | || || | || |
hh00415 3987 ATTGTACTTTATATGTTTGTTTCTGTGGTTGGATGATACTCTTGTCTGCC 4036
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mfj00269 2791 CAAAAATGGTAGAGGGGGTGCAGAAAGAGATTGCAGGATGAGAAG..... 2835
| ||| | ||| ||| | ||| | ||||| |
hh00415 4037 TTTTCTTTTTAGGAGACCAGCATAAACACTTTGGGGACTGAGAGGATAAG 4086
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mfj00269 2836 .................................................. 2836
hh00415 4087 CCATATCATTAGTGACCCTCGGCAGAAAGATTTCTGGTTACCATCAGCTG 4136
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mfj00269 2836 .................................................. 2836
hh00415 4137 GGAAAAGAGAACGAAATCAGGTAAGATCATTTTTCTTTGTCATCTTTATT 4186
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mfj00269 2836 ........................AGTAACACCAAACCCTGTCCCCCCCC 2861
|| || | ||| | | | |
hh00415 4187 TTATCATTTGGTTTCCTTTTCTTTAGAAAGAATAAAGCGTTGGCTTCTGA 4236
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mfj00269 2862 CCCCCCCCCCGAGTCACTCTGGTCAC........................ 2887
|| | | || || |||
hh00415 4237 TTTTCCTCACATTTCTGCTTGTGCACATGAGGTAAGGTTTCCTCTTTCTT 4286
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mfj00269 2888 .................................................. 2888
hh00415 4287 GTTATTTTGATTTTCTTGGAGAACCGTTTTCTAAGAGTATCCAACACTTA 4336
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mfj00269 2888 .................................................. 2888
hh00415 4337 CTGGTAAAAACTGCAGCTAATTCCTCTTTGTAGGTTCAACTGTGATCATT 4386
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mfj00269 2888 .................................................. 2888
hh00415 4387 AGTTTCTTGTAGCATATATTTCATAGGAATCCTGTTTTTATTTTAGTTTT 4436
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mfj00269 2888 ............AAGGTGACTTACTGTAACTGACTGTCTTATGG....GC 2921
||| | | || | |||| | | ||||| |
hh00415 4437 GAACTTTGCAGTAAGAAAGCAGAATGAATCTGATTTGCATATGGTTTAGT 4486
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mfj00269 2922 GTCTCAGCTGCATCCACAGAAGACAGGGACTGTGGCACTGTTACATAGTT 2971
|| | | |||| || | | ||| || | | ||
hh00415 4487 TCAACATCAGAATCCTGCATTGAGAAGTACTATGTTGAAGCCTAAACGTA 4536
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mfj00269 2972 CAAAGGTGAAAGTGGATGTG...TGTGTGCCGTCTGCTC..CTGCAGTGG 3016
|| ||| || || || || ||| || | || | |
hh00415 4537 TGGAGCAGAAGGTAGAGCTGCTTTGGGTGAAGTGGGGTCAAAGCCTTAGA 4586
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mfj00269 3017 CCAGTGGAACACA..................................... 3029
|||||| | ||
hh00415 4587 GCAGTGGTCCCCAACCTTATGTCACCAGGAACCATTTTTGTAGAAGACAG 4636
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mfj00269 3030 ..TTTCTACTGTCCTGAGTTGGG........................... 3050
|||| | | || | ||||||
hh00415 4637 TTTTTCCATGGACCCGGGTTGGGGGCGTGGTGAGGGGGGTGGTTTTGGGA 4686
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mfj00269 3051 ..................TTGAGGGAGAAATCTACTGACGATGCTTTT.. 3080
|| | | | | | || | | || | ||
hh00415 4687 TGATTCAAATGCATTACATTTATTGTGTACTTTATTTCTGTTGTTATTAC 4736
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mfj00269 3081 .......TAAATATTTCCAAACTGGTTC.ACTGGTCTTGATGACGGCTTG 3122
|| ||| | | | | | | ||||||| | ||| |||||
hh00415 4737 ATTGTAATATATAATGAAATAATTATACAACTGGTCATAATG.TAGCTTG 4785
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mfj00269 3123 T....TGAGACCTCCACAGTTAGGTGCAGAGGT................. 3151
| | || |||||| | |||
hh00415 4786 TGCTCCTGCAACTACACAGTCCCACCTGGGGGTGATGGGAAACAATGACA 4835
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mfj00269 3152 .ATCCCCTAGCTTTCCTCTGTGGTACATTGTGGTATACTGCCTGGTCCGT 3200
||| | || || || | || |||| || | |
hh00415 4836 GATCATCAGGCATTAGGCTTTCATAAGGTGTGCACAACCTAGGTCCCTCT 4885
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mfj00269 3201 CGTCCTCTTTTTACCTGGGATTTAAAGTAGCTTATATATACATATTTATT 3250
| | ||| || || | || || | | | || |
hh00415 4886 CATGCTCGGTTCACAGTAGGGTTTGCACTCCTATAAGAATCTAATGTGGC 4935
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mfj00269 3251 TATATTTTAAATATCTCTCTGAAGCCATGCCAATATTCAGAGGTGAAGGC 3300
| | | | | || || || || | | | ||
hh00415 4936 TGTTGATCTGACAGGAGGTAGAGCTCAGGCGGTAATGCCCACGATGGGGA 4985
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mfj00269 3301 AGAGTTGCATGCTTTACTCCATTGTATGAGTGAGC.CCACACTGAAACAA 3349
|| ||| |||| | | || || | | |
hh00415 4986 GCAGCTGCTTGCTGACAGCTCACCTCCTGCTGTGCGGCCCCGGGGTTGGG 5035
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mfj00269 3350 CAGACGTCCCTGCTAGGCTGCCCTGGTTA...TATAATCTGTTCTTTCTC 3396
| | | ||| || || ||| ||| | | ||| | |
hh00415 5036 GACCCCTGCCTTAGAGCCTCTCCTTCTTAGTCTTTTCCCTGGCTACCCCC 5085
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mfj00269 3397 ATTGGTGTCCCGAGTCAGCCTAAGGCCCACACCTAGG............. 3433
|| | ||| | || | ||||||| |||
hh00415 5086 TGAGGGGCCCCTTGGCATATTTAGGCCCATGTGGAGGGCTCACAATTTAA 5135
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mfj00269 3434 .........................AAGCGCTTTCATGACTGTTTATCAT 3458
| | || ||| || |
hh00415 5136 AAATTAACTCACAGTGGTTATCGATATGTTTCTTTATGTGTGAAGCTTTG 5185
5201 ----+----*----+----*----+----*----+----*----+----* 5250
mfj00269 3459 CTTTGTTTGTCATGCATTTCTACACATTTCTGGATACTTCTGACAGGGAT 3508
| ||| | | ||| | | || || || || | | | |||
hh00415 5186 TGATTTTTTTGGAGGATTGCATTATCTTGGTGATTAGTTGTAAAATAGAT 5235
5251 ----+----*----+----*----+----*----+----*----+----* 5300
mfj00269 3509 CATCCAAGACTACAGCATCTACCTATAATGAATG................ 3542
| | ||| | | || | ||
hh00415 5236 GAACACTGACAGGTGAAAAGTTGTAGGCTTCCTGTTTGTTGTGGGTTTTT 5285
5301 ----+----*----+----*----+----*----+----*----+----* 5350
mfj00269 3543 .GGAATAAAGTTATTTACCAAGAAAATAGAATATTAAGCACATAAATTCT 3591
| | || |||| ||| | ||| || | || ||| | |
hh00415 5286 TTGTTTTTTTTTTTTTAACAACTTAGTAGCTTACTGAGTTGATATACACG 5335
5351 ----+----*----+----*----+----*----+----*----+----* 5400
mfj00269 3592 TTCTAAA..ACAGGGTTGTAA..TTTATGGTCATTTTACAGTGT..AAAT 3635
|| | | || ||| || || || | | ||| | || | ||||
hh00415 5336 ATCCACATTTTAGACTTGGAATCTTCATTATGAATTTGCTGTTTCAAAAT 5385
5401 ----+----*----+----*----+----*----+----*----+----* 5450
mfj00269 3636 GCATGCTTAAGGAAGCCATTTATCCTGCTTATTTTCTATGTTAACCAGCT 3685
| | || || ||| | | | |||| | |
hh00415 5386 GAACTAGAGTGGTAGAAGACATAACTGGTGTATATGTATGAGATGATTTT 5435
5451 ----+----*----+----*----+----*----+----*----+----* 5500
mfj00269 3686 TCATTTGTATTTTAAACCTTACATTTAAAAAATTGTTTAT..GGCACAGT 3733
|| | | || | ||||| || |||| | ||| |
hh00415 5436 AGATGGCATATAGATGCCCAATTTTTAAGTTATGTATTATAGTGTACATT 5485
5501 ----+----*----+----*----+----*----+----*----+----* 5550
mfj00269 3734 GGATAATGTCAAA......AATTAAGATCTGTCTTTCAAGGAGAGAT... 3774
||| || | || || ||| | ||||| ||| | ||
hh00415 5486 GGAAAAGATGTAATTATGGTATCAAGCCTGTTATTTCACGGAAATATAGT 5535
5551 ----+----*----+----*----+----*----+----*----+----* 5600
mfj00269 3775 .........GCAGTTTTGCAATCAAGTTTTGTTGTCAGTATTGAAGATCA 3815
|| | ||| | | | | || | | |
hh00415 5536 AAGGACAAAGCTGAGCAAAAATAATTGATATGAGGAAAAATAATAAGTAA 5585
5601 ----+----*----+----*----+----*----+----*----+----* 5650
mfj00269 3816 CCTGCAGCCCTTAAAGATGGCCATTGATTGTGCTCATGCATTTCATATCA 3865
| | || | | ||| | | ||||| | | |||
hh00415 5586 ACAGTAGTACAGGTTGTAGGCAGATAAGGAAAGTCATGAAGGTGGTATGT 5635
5651 ----+----*----+----*----+----*----+----*----+----* 5700
mfj00269 3866 GAATTAATGAAG...................................... 3877
|| | || ||
hh00415 5636 GAGAGACTGCAGTTTGGGGAACACTAAGCTAGAGCACTAATCATGTTTGC 5685
5701 ----+----*----+----*----+----*----+----*----+----* 5750
mfj00269 3878 ...................CCAAGTGCCATGGTTCTGACATCTGTGTCTT 3908
| | | | || | | || ||| ||
hh00415 5686 ATCAGAGGATCCAAAGGCAGAAGGGGACCTGTGGCAGTCACCTG.ATCCA 5734
5751 ----+----*----+----*----+----*----+----*----+----* 5800
mfj00269 3909 GATATATCCTTATGGACTATATAGATGTTTCTCTGAATTTCACTGGTTTT 3958
||| | || | | | || |||| | | | |
hh00415 5735 GATCCGTTATTTGCAAATGACGAACTGGAGATCTGTAAGATTCAAACTAT 5784
5801 ----+----*----+----*----+----*----+----*----+----* 5850
mfj00269 3959 TTTCCTATAGTG...................................... 3970
|| || | ||||
hh00415 5785 TTGCCCAAAGTGATACAGCTAATAGAACCAAGATTGGAACCTCTGTGGCA 5834
5851 ----+----*----+----*----+----*----+----*----+----* 5900
mfj00269 3971 ..GACAAAAGTCACATTATGCATGAAGTCCATTCACAAGATTTTAGCTTT 4018
| || ||| | | | | || ||||| || || | |
hh00415 5835 GATAGAACAGTTGCTTAGTTTGTATTCTCATAAAACAAGTTTGAAGTTAT 5884
5901 ----+----*----+----*----+----*----+----*----+----* 5950
mfj00269 4019 ACCAGGAGGTTTCACGGGTCAGAGACTGT..................... 4047
|||| | ||| | |||
hh00415 5885 CATTCCGGGTTCTTCCAGTCTTTGTATGTCAGAGGGTATTAAGTTCTAAA 5934
5951 ----+----*----+----*----+----*----+----*----+----* 6000
mfj00269 4048 ............................................TCTCAG 4053
||
hh00415 5935 CTTTTTAGAGAGGACTGTTATGTTGTGGGAAAAGTCCAAAGAAAGCTAGC 5984
6001 ----+----*----+----*----+----*----+----*----+----* 6050
mfj00269 4054 ATACAGCATTTAAAGGAAGAGCTTCATTAGTGTCATCCCCTGCCTGAGTC 4103
| ||| | | | ||| ||| | | || || | |||
hh00415 5985 AAACATAAAGTGAGGGATCTCCTTTGATCCTCACAGCCACCTTTTGAAGT 6034
6051 ----+----*----+----*----+----*----+----*----+----* 6100
mfj00269 4104 GCTCTTTGCTCAGAGCTGATGAGAAGAGGGATTCAGTGCTGTGTACTAGG 4153
| || |||||||| | | | | | || || |
hh00415 6035 CAAATAGATGTTTTGCAGATGAGAAACTGAAATTA.TACTCTGAAAGCAA 6083
6101 ----+----*----+----*----+----*----+----*----+----* 6150
mfj00269 4154 TGCTACACTT.......................GTAGGGGCAGAATACAG 4180
| | || || |||| | | |
hh00415 6084 TATTTCATTTAGCCCTCATAATAACCCTGTAAAATAGGTAGGGCAGGCCT 6133
6151 ----+----*----+----*----+----*----+----*----+----* 6200
mfj00269 4181 TGTTCTGAGTGACATGTGGTTGGGCCTTGAGTTTTAGAAGTCAGTTGCAA 4230
| | | | |||| | || | ||| | || | | || |
hh00415 6134 GGCACAGTGGCTCATGCTTGTAATCCCAGCACTTTGGGAGGCTGAGGC.A 6182
6201 ----+----*----+----*----+----*----+----*----+----* 6250
mfj00269 4231 TGAAAAATTTCAGATGGCATTGGCTCTTAAACAAGGCAGTTCTCCCAGCA 4280
| | | || | || || || | || | | |
hh00415 6183 GGTGGATCACCTGAGGTCAGGGGTTCGAGACCAGCCTGGCCAACATGGTG 6232
6251 ----+----*----+----*----+----*- 6281
mfj00269 4281 ATGACCCAACTTAAATAAAGTGTCTTAACCC 4311
| || || | |||| |
hh00415 6233 AAACCCTGTCTCTACTAAAAATAC....... 6256