# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj00122.fasta.nr -Q ../query/mKIAA4083.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4083, 229 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919965 sequences Expectation_n fit: rho(ln(x))= 5.0544+/-0.00018; mu= 9.4955+/- 0.010 mean_var=66.8122+/-13.048, 0's: 32 Z-trim: 39 B-trim: 0 in 0/66 Lambda= 0.156908 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|81899841|sp|Q8CCH2.1|NHLC3_MOUSE RecName: Full= ( 347) 1483 344.0 1.8e-92 gi|109464737|ref|XP_227139.4| PREDICTED: similar t ( 347) 1444 335.1 8.1e-90 gi|149064803|gb|EDM14954.1| rCG49974, isoform CRA_ ( 386) 1444 335.2 8.8e-90 gi|26325416|dbj|BAC26462.1| unnamed protein produc ( 338) 1420 329.7 3.4e-88 gi|109120530|ref|XP_001087923.1| PREDICTED: simila ( 347) 1344 312.5 5.3e-83 gi|75054986|sp|Q5R9V0.1|NHLC3_PONAB RecName: Full= ( 347) 1335 310.5 2.2e-82 gi|119629019|gb|EAX08614.1| similar to RIKEN cDNA ( 320) 1332 309.8 3.3e-82 gi|74741946|sp|Q5JS37.1|NHLC3_HUMAN RecName: Full= ( 347) 1332 309.8 3.5e-82 gi|194387654|dbj|BAG61240.1| unnamed protein produ ( 347) 1332 309.8 3.5e-82 gi|119904563|ref|XP_583100.3| PREDICTED: similar t ( 351) 1283 298.7 7.7e-79 gi|194221847|ref|XP_001915760.1| PREDICTED: simila ( 347) 1270 295.8 5.8e-78 gi|57104952|ref|XP_543124.1| PREDICTED: similar to ( 347) 1268 295.3 8e-78 gi|126327651|ref|XP_001377844.1| PREDICTED: simila ( 339) 1201 280.1 2.9e-73 gi|149635846|ref|XP_001512567.1| PREDICTED: hypoth ( 331) 1125 262.9 4.3e-68 gi|118084933|ref|XP_417084.2| PREDICTED: similar t ( 502) 1033 242.2 1.1e-61 gi|224043319|ref|XP_002194747.1| PREDICTED: hypoth ( 346) 1021 239.4 5.4e-61 gi|149064804|gb|EDM14955.1| rCG49974, isoform CRA_ ( 150) 988 231.7 4.9e-59 gi|109120532|ref|XP_001087678.1| PREDICTED: simila ( 280) 941 221.2 1.3e-55 gi|209153330|gb|ACI33155.1| NHL repeat-containing ( 353) 942 221.5 1.3e-55 gi|119629020|gb|EAX08615.1| similar to RIKEN cDNA ( 280) 937 220.3 2.4e-55 gi|119629017|gb|EAX08612.1| similar to RIKEN cDNA ( 150) 919 216.1 2.5e-54 gi|73993166|ref|XP_855640.1| PREDICTED: similar to ( 280) 861 203.1 3.7e-50 gi|148703293|gb|EDL35240.1| RIKEN cDNA 8030451K01, ( 362) 830 196.2 5.8e-48 gi|210115953|gb|EEA63700.1| hypothetical protein B ( 305) 804 190.2 3e-46 gi|149064802|gb|EDM14953.1| rCG49974, isoform CRA_ ( 401) 792 187.6 2.5e-45 gi|210114523|gb|EEA62282.1| hypothetical protein B ( 306) 781 185.0 1.1e-44 gi|210120205|gb|EEA67925.1| hypothetical protein B ( 310) 691 164.7 1.5e-38 gi|210119998|gb|EEA67720.1| hypothetical protein B ( 310) 655 156.5 4.3e-36 gi|210124050|gb|EEA71748.1| hypothetical protein B ( 254) 570 137.2 2.3e-30 gi|210106511|gb|EEA54490.1| hypothetical protein B ( 337) 556 134.1 2.6e-29 gi|72115124|ref|XP_790110.1| PREDICTED: hypothetic ( 254) 542 130.9 1.9e-28 gi|148703292|gb|EDL35239.1| RIKEN cDNA 8030451K01, ( 102) 457 111.4 5.6e-23 gi|149064805|gb|EDM14956.1| rCG49975 [Rattus norve ( 95) 440 107.5 7.6e-22 gi|116224727|gb|ABJ83436.1| conserved hypothetical ( 333) 335 84.1 2.9e-14 gi|148846001|gb|EDL60341.1| hypothetical protein P ( 303) 323 81.3 1.8e-13 gi|163777862|gb|EDQ91478.1| predicted protein [Mon ( 119) 318 79.9 1.9e-13 gi|167041678|gb|ABZ06423.1| putative NHL repeat pr ( 343) 318 80.3 4.3e-13 gi|187482847|gb|EDU20849.1| NHL repeat containing ( 362) 298 75.7 1e-11 gi|91690651|gb|ABE33849.1| Conserved hypothetical ( 322) 292 74.3 2.4e-11 gi|116227859|gb|ABJ86568.1| NHL repeat containing ( 337) 288 73.5 4.7e-11 gi|167041731|gb|ABZ06475.1| putative NHL repeat pr ( 278) 282 72.0 1e-10 gi|91690638|gb|ABE33836.1| Conserved hypothetical ( 321) 279 71.4 1.9e-10 gi|196226118|gb|EDY20624.1| NHL repeat containing ( 320) 277 70.9 2.5e-10 gi|161161490|emb|CAN92795.1| hypothetical protein ( 199) 274 70.1 2.8e-10 gi|219545347|gb|ACL15797.1| NHL repeat containing ( 831) 270 69.6 1.6e-09 gi|146404875|gb|ABQ33381.1| hypothetical protein B ( 323) 263 67.8 2.3e-09 gi|72395126|gb|AAZ69399.1| conserved hypothetical ( 346) 263 67.8 2.4e-09 gi|134136193|gb|ABO57307.1| NHL repeat containing ( 279) 261 67.3 2.8e-09 gi|83845621|gb|EAP83499.1| hypothetical protein EE ( 284) 259 66.8 3.9e-09 gi|134136182|gb|ABO57296.1| NHL repeat containing ( 284) 258 66.6 4.6e-09 >>gi|81899841|sp|Q8CCH2.1|NHLC3_MOUSE RecName: Full=NHL (347 aa) initn: 1483 init1: 1483 opt: 1483 Z-score: 1816.5 bits: 344.0 E(): 1.8e-92 Smith-Waterman score: 1483; 100.000% identity (100.000% similar) in 218 aa overlap (12-229:130-347) 10 20 30 40 mKIAA4 FPQRVSLRSPRPYGHTVKKYNSLGDLVQVLGTPGKKGTGLN :::::::::::::::::::::::::::::: gi|818 WNYTVDTPHGMFVSGTPFEQSVWITDVGSGPYGHTVKKYNSLGDLVQVLGTPGKKGTGLN 100 110 120 130 140 150 50 60 70 80 90 100 mKIAA4 PLQFDNPAELYVDDTGEMYIVDGDGGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 PLQFDNPAELYVDDTGEMYIVDGDGGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHSV 160 170 180 190 200 210 110 120 130 140 150 160 mKIAA4 TLDAVGRVWVADRGNKRLQVFDKDTGEWLGAWDNCFTEEGPSAVRFTPDGKYLIVAQLNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 TLDAVGRVWVADRGNKRLQVFDKDTGEWLGAWDNCFTEEGPSAVRFTPDGKYLIVAQLNL 220 230 240 250 260 270 170 180 190 200 210 220 mKIAA4 SRLSVLLAPPSGSIGDCSVVSTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQIQKYIPWH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 SRLSVLLAPPSGSIGDCSVVSTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQIQKYIPWH 280 290 300 310 320 330 mKIAA4 SRTPAFGA :::::::: gi|818 SRTPAFGA 340 >>gi|109464737|ref|XP_227139.4| PREDICTED: similar to CG (347 aa) initn: 1444 init1: 1444 opt: 1444 Z-score: 1768.8 bits: 335.1 E(): 8.1e-90 Smith-Waterman score: 1444; 95.872% identity (99.541% similar) in 218 aa overlap (12-229:130-347) 10 20 30 40 mKIAA4 FPQRVSLRSPRPYGHTVKKYNSLGDLVQVLGTPGKKGTGLN :::::::::::::::::::::::::::::: gi|109 WNYTVDTPHGMFVSGTPYEQSVWITDVGSGPYGHTVKKYNSLGDLVQVLGTPGKKGTGLN 100 110 120 130 140 150 50 60 70 80 90 100 mKIAA4 PLQFDNPAELYVDDTGEMYIVDGDGGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHSV :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|109 PLQFDNPAELYVDDTGEIYIVDGDGGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHSV 160 170 180 190 200 210 110 120 130 140 150 160 mKIAA4 TLDAVGRVWVADRGNKRLQVFDKDTGEWLGAWDNCFTEEGPSAVRFTPDGKYLIVAQLNL :::.::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|109 TLDSVGRVWVADRGNKRLQVFDKDTGEWLGAWDNCFTEEGPSAVRFTPDGRYLIVAQLNL 220 230 240 250 260 270 170 180 190 200 210 220 mKIAA4 SRLSVLLAPPSGSIGDCSVVSTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQIQKYIPWH ::::.: ::::::::::.:::::::::.::::::::::::::::::::::::::::.::: gi|109 SRLSLLAAPPSGSIGDCTVVSTIQLADEVLPHLLEVDRKTGAVYVAEIGAKQIQKYVPWH 280 290 300 310 320 330 mKIAA4 SRTPAFGA :::::.:: gi|109 SRTPALGA 340 >>gi|149064803|gb|EDM14954.1| rCG49974, isoform CRA_b [R (386 aa) initn: 1444 init1: 1444 opt: 1444 Z-score: 1768.2 bits: 335.2 E(): 8.8e-90 Smith-Waterman score: 1444; 95.872% identity (99.541% similar) in 218 aa overlap (12-229:169-386) 10 20 30 40 mKIAA4 FPQRVSLRSPRPYGHTVKKYNSLGDLVQVLGTPGKKGTGLN :::::::::::::::::::::::::::::: gi|149 WNYTVDTPHGMFVSGTPYEQSVWITDVGSGPYGHTVKKYNSLGDLVQVLGTPGKKGTGLN 140 150 160 170 180 190 50 60 70 80 90 100 mKIAA4 PLQFDNPAELYVDDTGEMYIVDGDGGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHSV :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|149 PLQFDNPAELYVDDTGEIYIVDGDGGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHSV 200 210 220 230 240 250 110 120 130 140 150 160 mKIAA4 TLDAVGRVWVADRGNKRLQVFDKDTGEWLGAWDNCFTEEGPSAVRFTPDGKYLIVAQLNL :::.::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|149 TLDSVGRVWVADRGNKRLQVFDKDTGEWLGAWDNCFTEEGPSAVRFTPDGRYLIVAQLNL 260 270 280 290 300 310 170 180 190 200 210 220 mKIAA4 SRLSVLLAPPSGSIGDCSVVSTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQIQKYIPWH ::::.: ::::::::::.:::::::::.::::::::::::::::::::::::::::.::: gi|149 SRLSLLAAPPSGSIGDCTVVSTIQLADEVLPHLLEVDRKTGAVYVAEIGAKQIQKYVPWH 320 330 340 350 360 370 mKIAA4 SRTPAFGA :::::.:: gi|149 SRTPALGA 380 >>gi|26325416|dbj|BAC26462.1| unnamed protein product [M (338 aa) initn: 1420 init1: 1420 opt: 1420 Z-score: 1739.6 bits: 329.7 E(): 3.4e-88 Smith-Waterman score: 1420; 100.000% identity (100.000% similar) in 209 aa overlap (12-220:130-338) 10 20 30 40 mKIAA4 FPQRVSLRSPRPYGHTVKKYNSLGDLVQVLGTPGKKGTGLN :::::::::::::::::::::::::::::: gi|263 WNYTVDTPHGMFVSGTPFEQSVWITDVGSGPYGHTVKKYNSLGDLVQVLGTPGKKGTGLN 100 110 120 130 140 150 50 60 70 80 90 100 mKIAA4 PLQFDNPAELYVDDTGEMYIVDGDGGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PLQFDNPAELYVDDTGEMYIVDGDGGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHSV 160 170 180 190 200 210 110 120 130 140 150 160 mKIAA4 TLDAVGRVWVADRGNKRLQVFDKDTGEWLGAWDNCFTEEGPSAVRFTPDGKYLIVAQLNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 TLDAVGRVWVADRGNKRLQVFDKDTGEWLGAWDNCFTEEGPSAVRFTPDGKYLIVAQLNL 220 230 240 250 260 270 170 180 190 200 210 220 mKIAA4 SRLSVLLAPPSGSIGDCSVVSTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQIQKYIPWH ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SRLSVLLAPPSGSIGDCSVVSTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQIQKYIPW 280 290 300 310 320 330 mKIAA4 SRTPAFGA >>gi|109120530|ref|XP_001087923.1| PREDICTED: similar to (347 aa) initn: 1364 init1: 1340 opt: 1344 Z-score: 1646.5 bits: 312.5 E(): 5.3e-83 Smith-Waterman score: 1344; 88.479% identity (98.157% similar) in 217 aa overlap (13-229:131-347) 10 20 30 40 mKIAA4 FPQRVSLRSPRPYGHTVKKYNSLGDLVQVLGTPGKKGTGLNP .:::::::.:.::::::::::::::::::: gi|109 NYTVDTPHGIFAASTLYEQSIWITDVGSGFFGHTVKKYSSFGDLVQVLGTPGKKGTGLNP 110 120 130 140 150 160 50 60 70 80 90 100 mKIAA4 LQFDNPAELYVDDTGEMYIVDGDGGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHSVT :::::::::::.:::..:::::::::::::.:::::::::::.::::::::::::::::: gi|109 LQFDNPAELYVEDTGDIYIVDGDGGLNNRLIKLSQDFMILWLHGENGTGPAKFNIPHSVT 170 180 190 200 210 220 110 120 130 140 150 160 mKIAA4 LDAVGRVWVADRGNKRLQVFDKDTGEWLGAWDNCFTEEGPSAVRFTPDGKYLIVAQLNLS ::..::::::::::::.::::::::::::::.:::::::::.:::::::::::::::::: gi|109 LDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEGPSSVRFTPDGKYLIVAQLNLS 230 240 250 260 270 280 170 180 190 200 210 220 mKIAA4 RLSVLLAPPSGSIGDCSVVSTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQIQKYIPWHS ::::. ::: ::::.:::.::::::::::::::::::::::::::::::::.:::.: .: gi|109 RLSVVAAPPVGSIGECSVISTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQVQKYVPLNS 290 300 310 320 330 340 mKIAA4 RTPAFGA .::::. gi|109 YVPAFGS >>gi|75054986|sp|Q5R9V0.1|NHLC3_PONAB RecName: Full=NHL (347 aa) initn: 1355 init1: 1331 opt: 1335 Z-score: 1635.5 bits: 310.5 E(): 2.2e-82 Smith-Waterman score: 1335; 87.558% identity (97.696% similar) in 217 aa overlap (13-229:131-347) 10 20 30 40 mKIAA4 FPQRVSLRSPRPYGHTVKKYNSLGDLVQVLGTPGKKGTGLNP .:::::::.:.::::::::::::::::::: gi|750 NYTVDTPHGIFAASTLYEQSVWITDVGSGFFGHTVKKYSSFGDLVQVLGTPGKKGTGLNP 110 120 130 140 150 160 50 60 70 80 90 100 mKIAA4 LQFDNPAELYVDDTGEMYIVDGDGGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHSVT :::::::::::.:::..:::::::::::::.:::::::::::.::::::::::::::::: gi|750 LQFDNPAELYVEDTGDIYIVDGDGGLNNRLIKLSQDFMILWLHGENGTGPAKFNIPHSVT 170 180 190 200 210 220 110 120 130 140 150 160 mKIAA4 LDAVGRVWVADRGNKRLQVFDKDTGEWLGAWDNCFTEEGPSAVRFTPDGKYLIVAQLNLS ::..::::::::::::.::::::::::::::.:::::::::.:::::::::::::::::: gi|750 LDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEGPSSVRFTPDGKYLIVAQLNLS 230 240 250 260 270 280 170 180 190 200 210 220 mKIAA4 RLSVLLAPPSGSIGDCSVVSTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQIQKYIPWHS ::: . ::: ::::.:::.::::::::::::::::::::::::::::::::.:::.: .: gi|750 RLSFVTAPPVGSIGECSVISTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQVQKYVPLNS 290 300 310 320 330 340 mKIAA4 RTPAFGA .:.::. gi|750 YVPSFGS >>gi|119629019|gb|EAX08614.1| similar to RIKEN cDNA 8030 (320 aa) initn: 1352 init1: 1328 opt: 1332 Z-score: 1632.3 bits: 309.8 E(): 3.3e-82 Smith-Waterman score: 1332; 87.558% identity (98.157% similar) in 217 aa overlap (13-229:104-320) 10 20 30 40 mKIAA4 FPQRVSLRSPRPYGHTVKKYNSLGDLVQVLGTPGKKGTGLNP .:::::::.:.:::::::::::::::.::: gi|119 NYTVDTPHGIFAASTLYEQSVWITDVGSGFFGHTVKKYSSFGDLVQVLGTPGKKGTSLNP 80 90 100 110 120 130 50 60 70 80 90 100 mKIAA4 LQFDNPAELYVDDTGEMYIVDGDGGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHSVT :::::::::::.:::..:::::::::::::.:::::::::::.::::::::::::::::: gi|119 LQFDNPAELYVEDTGDIYIVDGDGGLNNRLIKLSQDFMILWLHGENGTGPAKFNIPHSVT 140 150 160 170 180 190 110 120 130 140 150 160 mKIAA4 LDAVGRVWVADRGNKRLQVFDKDTGEWLGAWDNCFTEEGPSAVRFTPDGKYLIVAQLNLS ::..::::::::::::.::::::::::::::.:::::::::.:::::::::::::::::: gi|119 LDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEGPSSVRFTPDGKYLIVAQLNLS 200 210 220 230 240 250 170 180 190 200 210 220 mKIAA4 RLSVLLAPPSGSIGDCSVVSTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQIQKYIPWHS ::::. ::: ::::.:::.::::::::::::::::::::::::::::::::.:::.: .: gi|119 RLSVVAAPPVGSIGECSVISTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQVQKYVPLNS 260 270 280 290 300 310 mKIAA4 RTPAFGA .:.::. gi|119 YVPSFGS 320 >>gi|74741946|sp|Q5JS37.1|NHLC3_HUMAN RecName: Full=NHL (347 aa) initn: 1352 init1: 1328 opt: 1332 Z-score: 1631.8 bits: 309.8 E(): 3.5e-82 Smith-Waterman score: 1332; 87.558% identity (98.157% similar) in 217 aa overlap (13-229:131-347) 10 20 30 40 mKIAA4 FPQRVSLRSPRPYGHTVKKYNSLGDLVQVLGTPGKKGTGLNP .:::::::.:.:::::::::::::::.::: gi|747 NYTVDTPHGIFAASTLYEQSVWITDVGSGFFGHTVKKYSSFGDLVQVLGTPGKKGTSLNP 110 120 130 140 150 160 50 60 70 80 90 100 mKIAA4 LQFDNPAELYVDDTGEMYIVDGDGGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHSVT :::::::::::.:::..:::::::::::::.:::::::::::.::::::::::::::::: gi|747 LQFDNPAELYVEDTGDIYIVDGDGGLNNRLIKLSQDFMILWLHGENGTGPAKFNIPHSVT 170 180 190 200 210 220 110 120 130 140 150 160 mKIAA4 LDAVGRVWVADRGNKRLQVFDKDTGEWLGAWDNCFTEEGPSAVRFTPDGKYLIVAQLNLS ::..::::::::::::.::::::::::::::.:::::::::.:::::::::::::::::: gi|747 LDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEGPSSVRFTPDGKYLIVAQLNLS 230 240 250 260 270 280 170 180 190 200 210 220 mKIAA4 RLSVLLAPPSGSIGDCSVVSTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQIQKYIPWHS ::::. ::: ::::.:::.::::::::::::::::::::::::::::::::.:::.: .: gi|747 RLSVVAAPPVGSIGECSVISTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQVQKYVPLNS 290 300 310 320 330 340 mKIAA4 RTPAFGA .:.::. gi|747 YVPSFGS >>gi|194387654|dbj|BAG61240.1| unnamed protein product [ (347 aa) initn: 1352 init1: 1328 opt: 1332 Z-score: 1631.8 bits: 309.8 E(): 3.5e-82 Smith-Waterman score: 1332; 87.558% identity (98.157% similar) in 217 aa overlap (13-229:131-347) 10 20 30 40 mKIAA4 FPQRVSLRSPRPYGHTVKKYNSLGDLVQVLGTPGKKGTGLNP .:::::::.:.:::::::::::::::.::: gi|194 NYTVDTPHGIFAASTLYEQSVWITDVGSGFFGHTVKKYSSFGDLVQVLGTPGKKGTSLNP 110 120 130 140 150 160 50 60 70 80 90 100 mKIAA4 LQFDNPAELYVDDTGEMYIVDGDGGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHSVT :::::::::::.:::..:::::::::::::.:::::::::::.::::::::::::::::: gi|194 LQFDNPAELYVEDTGDIYIVDGDGGLNNRLIKLSQDFMILWLHGENGTGPAKFNIPHSVT 170 180 190 200 210 220 110 120 130 140 150 160 mKIAA4 LDAVGRVWVADRGNKRLQVFDKDTGEWLGAWDNCFTEEGPSAVRFTPDGKYLIVAQLNLS ::..::::::::::::.::::::::::::::.:::::::::.:::::::::::::::::: gi|194 LDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEEGPSSVRFTPDGKYLIVAQLNLS 230 240 250 260 270 280 170 180 190 200 210 220 mKIAA4 RLSVLLAPPSGSIGDCSVVSTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQIQKYIPWHS ::::. ::: ::::.:::.::::::::::::::::::::::::::::::::.:::.: .: gi|194 RLSVVAAPPVGSIGECSVISTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQVQKYVPLNS 290 300 310 320 330 340 mKIAA4 RTPAFGA .:.::. gi|194 YVPSFGS >>gi|119904563|ref|XP_583100.3| PREDICTED: similar to NH (351 aa) initn: 1319 init1: 1283 opt: 1283 Z-score: 1571.8 bits: 298.7 E(): 7.7e-79 Smith-Waterman score: 1283; 86.730% identity (96.209% similar) in 211 aa overlap (13-223:133-343) 10 20 30 40 mKIAA4 FPQRVSLRSPRPYGHTVKKYNSLGDLVQVLGTPGKKGTGLNP ::::.:::::.::::::::::::::::::: gi|119 NYTVDTPHGIFAASTPQEKSVWITDVGSGFYGHTIKKYNSFGDLVQVLGTPGKKGTGLNP 110 120 130 140 150 160 50 60 70 80 90 100 mKIAA4 LQFDNPAELYVDDTGEMYIVDGDGGLNNRLVKLSQDFMILWLRGENGTGPAKFNIPHSVT :::::::::.:::::..:::::::::::::.::::::::::::::::::::::::::::: gi|119 LQFDNPAELHVDDTGDIYIVDGDGGLNNRLIKLSQDFMILWLRGENGTGPAKFNIPHSVT 170 180 190 200 210 220 110 120 130 140 150 160 mKIAA4 LDAVGRVWVADRGNKRLQVFDKDTGEWLGAWDNCFTEEGPSAVRFTPDGKYLIVAQLNLS .:..:::::::::::::::::::::.::: : :::.:::::::::::::::..::::::: gi|119 VDSTGRVWVADRGNKRLQVFDKDTGDWLGEWKNCFSEEGPSAVRFTPDGKYVVVAQLNLS 230 240 250 260 270 280 170 180 190 200 210 220 mKIAA4 RLSVLLAPPSGSIGDCSVVSTIQLADQVLPHLLEVDRKTGAVYVAEIGAKQIQKYIPWHS :: .: ::: :.:::: ::::::::::: ::::::.:.:::::::::::::.::::: .: gi|119 RLLILAAPPVGNIGDCFVVSTIQLADQVSPHLLEVSRETGAVYVAEIGAKQVQKYIPVNS 290 300 310 320 330 340 mKIAA4 RTPAFGA . gi|119 KLLERWDLD 350 229 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 10:43:16 2009 done: Tue Mar 17 10:48:20 2009 Total Scan time: 716.800 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]