# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mfj00049.fasta.nr -Q ../query/mKIAA4196.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4196, 437 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7890856 sequences Expectation_n fit: rho(ln(x))= 4.6230+/-0.000186; mu= 10.0148+/- 0.010 mean_var=73.0722+/-13.861, 0's: 23 Z-trim: 223 B-trim: 3 in 1/66 Lambda= 0.150037 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148693150|gb|EDL25097.1| mCG67939, isoform CRA_ ( 824) 3127 687.3 3.7e-195 gi|122069112|sp|P10076.2|ZFP26_MOUSE RecName: Full ( 861) 3127 687.3 3.8e-195 gi|148693149|gb|EDL25096.1| mCG67939, isoform CRA_ ( 931) 3127 687.3 4e-195 gi|148693148|gb|EDL25095.1| mCG67939, isoform CRA_ ( 959) 3127 687.3 4.1e-195 gi|149020577|gb|EDL78382.1| rCG31912, isoform CRA_ ( 861) 3082 677.5 3.3e-192 gi|149020578|gb|EDL78383.1| rCG31912, isoform CRA_ ( 868) 3082 677.5 3.3e-192 gi|219280810|ref|NP_001102465.2| zinc finger prote ( 956) 3082 677.6 3.5e-192 gi|53133|emb|CAA31105.1| mkr3 [Mus musculus] g ( 428) 2984 656.0 4.9e-186 gi|74194406|dbj|BAE24702.1| unnamed protein produc ( 754) 2009 445.2 2.5e-122 gi|149020581|gb|EDL78386.1| rCG31761, isoform CRA_ ( 749) 2004 444.1 5.2e-122 gi|26349505|dbj|BAC38392.1| unnamed protein produc ( 766) 1890 419.5 1.4e-114 gi|109124478|ref|XP_001104516.1| PREDICTED: simila (1233) 1850 411.0 7.9e-112 gi|26325254|dbj|BAC26381.1| unnamed protein produc ( 600) 1843 409.2 1.4e-111 gi|123227460|emb|CAM27169.1| novel KRAB box and zi ( 834) 1841 408.9 2.3e-111 gi|149250475|ref|XP_001472364.1| PREDICTED: simila ( 839) 1841 408.9 2.3e-111 gi|126304614|ref|XP_001368898.1| PREDICTED: simila ( 774) 1839 408.4 3e-111 gi|126339341|ref|XP_001368177.1| PREDICTED: simila (1530) 1831 407.0 1.6e-110 gi|109123306|ref|XP_001102914.1| PREDICTED: simila ( 642) 1820 404.2 4.5e-110 gi|149250458|ref|XP_001472116.1| PREDICTED: simila ( 569) 1815 403.1 8.8e-110 gi|123210392|emb|CAM27283.1| novel KRAB box and zi ( 582) 1815 403.1 9e-110 gi|194213234|ref|XP_001493042.2| PREDICTED: simila ( 890) 1814 403.1 1.4e-109 gi|109461612|ref|XP_001078762.1| PREDICTED: simila (1321) 1815 403.5 1.6e-109 gi|109458488|ref|XP_574414.2| PREDICTED: similar t (1396) 1815 403.5 1.6e-109 gi|73946821|ref|XP_862028.1| PREDICTED: similar to ( 930) 1812 402.7 1.9e-109 gi|123232535|emb|CAM21132.1| novel KRAB box and zi ( 610) 1808 401.6 2.6e-109 gi|149250150|ref|XP_001480959.1| PREDICTED: simila ( 641) 1808 401.6 2.7e-109 gi|126323911|ref|XP_001377937.1| PREDICTED: simila ( 597) 1807 401.4 3e-109 gi|21754722|dbj|BAC04552.1| unnamed protein produc ( 595) 1804 400.7 4.7e-109 gi|119604430|gb|EAW84024.1| hCG2039382 [Homo sapie ( 602) 1804 400.8 4.8e-109 gi|126325080|ref|XP_001374202.1| PREDICTED: simila ( 631) 1804 400.8 4.9e-109 gi|94730691|sp|Q32M78.1|ZN699_HUMAN RecName: Full= ( 642) 1804 400.8 5e-109 gi|194668302|ref|XP_608466.4| PREDICTED: similar t ( 648) 1802 400.4 6.8e-109 gi|73987025|ref|XP_542087.2| PREDICTED: similar to (1021) 1804 401.0 6.9e-109 gi|148669906|gb|EDL01853.1| mCG58995, isoform CRA_ ( 609) 1801 400.1 7.6e-109 gi|126343187|ref|XP_001374758.1| PREDICTED: simila ( 898) 1798 399.6 1.6e-108 gi|76681672|ref|XP_869959.1| PREDICTED: zinc finge ( 685) 1796 399.1 1.7e-108 gi|123232533|emb|CAM21130.1| novel KRAB box and zi ( 610) 1795 398.8 1.9e-108 gi|73946823|ref|XP_862054.1| PREDICTED: similar to (1014) 1797 399.5 2e-108 gi|126328845|ref|XP_001374290.1| PREDICTED: simila (1010) 1794 398.8 3.1e-108 gi|194215374|ref|XP_001494160.2| PREDICTED: zinc f ( 690) 1792 398.2 3.2e-108 gi|73970472|ref|XP_531878.2| PREDICTED: similar to (1216) 1794 398.9 3.5e-108 gi|126342482|ref|XP_001377265.1| PREDICTED: simila ( 864) 1791 398.1 4.3e-108 gi|73946819|ref|XP_861994.1| PREDICTED: hypothetic ( 986) 1790 397.9 5.5e-108 gi|109658516|gb|AAI17220.1| ZNF569 protein [Homo s ( 527) 1787 397.0 5.6e-108 gi|74762209|sp|Q5MCW4.1|ZN569_HUMAN RecName: Full= ( 686) 1787 397.1 6.7e-108 gi|119577135|gb|EAW56731.1| zinc finger protein 56 ( 710) 1787 397.1 6.9e-108 gi|109124526|ref|XP_001105632.1| PREDICTED: simila (1114) 1785 396.9 1.3e-107 gi|109124528|ref|XP_001105560.1| PREDICTED: simila (1117) 1785 396.9 1.3e-107 gi|194213112|ref|XP_001916328.1| PREDICTED: simila ( 798) 1783 396.3 1.4e-107 gi|149047059|gb|EDL99779.1| rCG22999, isoform CRA_ ( 557) 1780 395.5 1.7e-107 >>gi|148693150|gb|EDL25097.1| mCG67939, isoform CRA_d [M (824 aa) initn: 3127 init1: 3127 opt: 3127 Z-score: 3660.0 bits: 687.3 E(): 3.7e-195 Smith-Waterman score: 3127; 100.000% identity (100.000% similar) in 437 aa overlap (1-437:388-824) 10 20 30 mKIAA4 SFAQLTEHIKTHTGEKPFRCKVCARTFRNS :::::::::::::::::::::::::::::: gi|148 FSGRSWLTIHLRKHTGERPYPCTECEKAFTSFAQLTEHIKTHTGEKPFRCKVCARTFRNS 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA4 SCLKTHFRIHTGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SCLKTHFRIHTGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLV 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA4 EHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMR 480 490 500 510 520 530 160 170 180 190 200 210 mKIAA4 THTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 THTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSS 540 550 560 570 580 590 220 230 240 250 260 270 mKIAA4 ERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSY 600 610 620 630 640 650 280 290 300 310 320 330 mKIAA4 ACQECGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ACQECGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTV 660 670 680 690 700 710 340 350 360 370 380 390 mKIAA4 CGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKA 720 730 740 750 760 770 400 410 420 430 mKIAA4 FTEHSGLNKHLRKHTGEKPYEYKECGENFTTSADANEHETPHWGENL ::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FTEHSGLNKHLRKHTGEKPYEYKECGENFTTSADANEHETPHWGENL 780 790 800 810 820 >>gi|122069112|sp|P10076.2|ZFP26_MOUSE RecName: Full=Zin (861 aa) initn: 3127 init1: 3127 opt: 3127 Z-score: 3659.8 bits: 687.3 E(): 3.8e-195 Smith-Waterman score: 3127; 100.000% identity (100.000% similar) in 437 aa overlap (1-437:425-861) 10 20 30 mKIAA4 SFAQLTEHIKTHTGEKPFRCKVCARTFRNS :::::::::::::::::::::::::::::: gi|122 FSGRSWLTIHLRKHTGERPYPCTECEKAFTSFAQLTEHIKTHTGEKPFRCKVCARTFRNS 400 410 420 430 440 450 40 50 60 70 80 90 mKIAA4 SCLKTHFRIHTGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 SCLKTHFRIHTGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLV 460 470 480 490 500 510 100 110 120 130 140 150 mKIAA4 EHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 EHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMR 520 530 540 550 560 570 160 170 180 190 200 210 mKIAA4 THTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 THTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSS 580 590 600 610 620 630 220 230 240 250 260 270 mKIAA4 ERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 ERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSY 640 650 660 670 680 690 280 290 300 310 320 330 mKIAA4 ACQECGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 ACQECGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTV 700 710 720 730 740 750 340 350 360 370 380 390 mKIAA4 CGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 CGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKA 760 770 780 790 800 810 400 410 420 430 mKIAA4 FTEHSGLNKHLRKHTGEKPYEYKECGENFTTSADANEHETPHWGENL ::::::::::::::::::::::::::::::::::::::::::::::: gi|122 FTEHSGLNKHLRKHTGEKPYEYKECGENFTTSADANEHETPHWGENL 820 830 840 850 860 >>gi|148693149|gb|EDL25096.1| mCG67939, isoform CRA_c [M (931 aa) initn: 3127 init1: 3127 opt: 3127 Z-score: 3659.4 bits: 687.3 E(): 4e-195 Smith-Waterman score: 3127; 100.000% identity (100.000% similar) in 437 aa overlap (1-437:495-931) 10 20 30 mKIAA4 SFAQLTEHIKTHTGEKPFRCKVCARTFRNS :::::::::::::::::::::::::::::: gi|148 FSGRSWLTIHLRKHTGERPYPCTECEKAFTSFAQLTEHIKTHTGEKPFRCKVCARTFRNS 470 480 490 500 510 520 40 50 60 70 80 90 mKIAA4 SCLKTHFRIHTGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SCLKTHFRIHTGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLV 530 540 550 560 570 580 100 110 120 130 140 150 mKIAA4 EHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMR 590 600 610 620 630 640 160 170 180 190 200 210 mKIAA4 THTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 THTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSS 650 660 670 680 690 700 220 230 240 250 260 270 mKIAA4 ERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSY 710 720 730 740 750 760 280 290 300 310 320 330 mKIAA4 ACQECGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ACQECGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTV 770 780 790 800 810 820 340 350 360 370 380 390 mKIAA4 CGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKA 830 840 850 860 870 880 400 410 420 430 mKIAA4 FTEHSGLNKHLRKHTGEKPYEYKECGENFTTSADANEHETPHWGENL ::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FTEHSGLNKHLRKHTGEKPYEYKECGENFTTSADANEHETPHWGENL 890 900 910 920 930 >>gi|148693148|gb|EDL25095.1| mCG67939, isoform CRA_b [M (959 aa) initn: 3127 init1: 3127 opt: 3127 Z-score: 3659.2 bits: 687.3 E(): 4.1e-195 Smith-Waterman score: 3127; 100.000% identity (100.000% similar) in 437 aa overlap (1-437:523-959) 10 20 30 mKIAA4 SFAQLTEHIKTHTGEKPFRCKVCARTFRNS :::::::::::::::::::::::::::::: gi|148 FSGRSWLTIHLRKHTGERPYPCTECEKAFTSFAQLTEHIKTHTGEKPFRCKVCARTFRNS 500 510 520 530 540 550 40 50 60 70 80 90 mKIAA4 SCLKTHFRIHTGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SCLKTHFRIHTGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLV 560 570 580 590 600 610 100 110 120 130 140 150 mKIAA4 EHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMR 620 630 640 650 660 670 160 170 180 190 200 210 mKIAA4 THTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 THTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSS 680 690 700 710 720 730 220 230 240 250 260 270 mKIAA4 ERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSY 740 750 760 770 780 790 280 290 300 310 320 330 mKIAA4 ACQECGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ACQECGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTV 800 810 820 830 840 850 340 350 360 370 380 390 mKIAA4 CGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKA 860 870 880 890 900 910 400 410 420 430 mKIAA4 FTEHSGLNKHLRKHTGEKPYEYKECGENFTTSADANEHETPHWGENL ::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FTEHSGLNKHLRKHTGEKPYEYKECGENFTTSADANEHETPHWGENL 920 930 940 950 >>gi|149020577|gb|EDL78382.1| rCG31912, isoform CRA_b [R (861 aa) initn: 3082 init1: 3082 opt: 3082 Z-score: 3607.2 bits: 677.5 E(): 3.3e-192 Smith-Waterman score: 3082; 98.627% identity (99.085% similar) in 437 aa overlap (1-437:425-861) 10 20 30 mKIAA4 SFAQLTEHIKTHTGEKPFRCKVCARTFRNS :::::::::::::::::::::::::::::: gi|149 FSGRSWLTIHLRKHTGERPYPCTECEKAFTSFAQLTEHIKTHTGEKPFRCKVCARTFRNS 400 410 420 430 440 450 40 50 60 70 80 90 mKIAA4 SCLKTHFRIHTGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLV ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: gi|149 SCLKTHFRIHTGIKPYKCNYCGKDFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLV 460 470 480 490 500 510 100 110 120 130 140 150 mKIAA4 EHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMR 520 530 540 550 560 570 160 170 180 190 200 210 mKIAA4 THTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 THTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSS 580 590 600 610 620 630 220 230 240 250 260 270 mKIAA4 ERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSY ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|149 ERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKDFTARSGLTIHLRNHTGEKSY 640 650 660 670 680 690 280 290 300 310 320 330 mKIAA4 ACQECGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ACQECGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTV 700 710 720 730 740 750 340 350 360 370 380 390 mKIAA4 CGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKA 760 770 780 790 800 810 400 410 420 430 mKIAA4 FTEHSGLNKHLRKHTGEKPYEYKECGENFTTSADANEHETPHWGENL :::::::::::::::::::::::. :: ::::.:::::::::::::: gi|149 FTEHSGLNKHLRKHTGEKPYEYKDSGEAFTTSTDANEHETPHWGENL 820 830 840 850 860 >>gi|149020578|gb|EDL78383.1| rCG31912, isoform CRA_c [R (868 aa) initn: 3082 init1: 3082 opt: 3082 Z-score: 3607.1 bits: 677.5 E(): 3.3e-192 Smith-Waterman score: 3082; 98.627% identity (99.085% similar) in 437 aa overlap (1-437:432-868) 10 20 30 mKIAA4 SFAQLTEHIKTHTGEKPFRCKVCARTFRNS :::::::::::::::::::::::::::::: gi|149 FSGRSWLTIHLRKHTGERPYPCTECEKAFTSFAQLTEHIKTHTGEKPFRCKVCARTFRNS 410 420 430 440 450 460 40 50 60 70 80 90 mKIAA4 SCLKTHFRIHTGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLV ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: gi|149 SCLKTHFRIHTGIKPYKCNYCGKDFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLV 470 480 490 500 510 520 100 110 120 130 140 150 mKIAA4 EHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 EHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMR 530 540 550 560 570 580 160 170 180 190 200 210 mKIAA4 THTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 THTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSS 590 600 610 620 630 640 220 230 240 250 260 270 mKIAA4 ERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSY ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|149 ERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKDFTARSGLTIHLRNHTGEKSY 650 660 670 680 690 700 280 290 300 310 320 330 mKIAA4 ACQECGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ACQECGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTV 710 720 730 740 750 760 340 350 360 370 380 390 mKIAA4 CGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKA 770 780 790 800 810 820 400 410 420 430 mKIAA4 FTEHSGLNKHLRKHTGEKPYEYKECGENFTTSADANEHETPHWGENL :::::::::::::::::::::::. :: ::::.:::::::::::::: gi|149 FTEHSGLNKHLRKHTGEKPYEYKDSGEAFTTSTDANEHETPHWGENL 830 840 850 860 >>gi|219280810|ref|NP_001102465.2| zinc finger protein 2 (956 aa) initn: 3082 init1: 3082 opt: 3082 Z-score: 3606.6 bits: 677.6 E(): 3.5e-192 Smith-Waterman score: 3082; 98.627% identity (99.085% similar) in 437 aa overlap (1-437:520-956) 10 20 30 mKIAA4 SFAQLTEHIKTHTGEKPFRCKVCARTFRNS :::::::::::::::::::::::::::::: gi|219 FSGRSWLTIHLRKHTGERPYPCTECEKAFTSFAQLTEHIKTHTGEKPFRCKVCARTFRNS 490 500 510 520 530 540 40 50 60 70 80 90 mKIAA4 SCLKTHFRIHTGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLV ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: gi|219 SCLKTHFRIHTGIKPYKCNYCGKDFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLV 550 560 570 580 590 600 100 110 120 130 140 150 mKIAA4 EHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 EHIRIHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMR 610 620 630 640 650 660 160 170 180 190 200 210 mKIAA4 THTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 THTGEKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSS 670 680 690 700 710 720 220 230 240 250 260 270 mKIAA4 ERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSY ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|219 ERPFQCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKDFTARSGLTIHLRNHTGEKSY 730 740 750 760 770 780 280 290 300 310 320 330 mKIAA4 ACQECGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 ACQECGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTV 790 800 810 820 830 840 340 350 360 370 380 390 mKIAA4 CGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 CGKTFTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKA 850 860 870 880 890 900 400 410 420 430 mKIAA4 FTEHSGLNKHLRKHTGEKPYEYKECGENFTTSADANEHETPHWGENL :::::::::::::::::::::::. :: ::::.:::::::::::::: gi|219 FTEHSGLNKHLRKHTGEKPYEYKDSGEAFTTSTDANEHETPHWGENL 910 920 930 940 950 >>gi|53133|emb|CAA31105.1| mkr3 [Mus musculus] gi|38 (428 aa) initn: 7240 init1: 2984 opt: 2984 Z-score: 3496.3 bits: 656.0 E(): 4.9e-186 Smith-Waterman score: 2984; 97.190% identity (98.829% similar) in 427 aa overlap (9-435:1-427) 10 20 30 40 50 60 mKIAA4 SFAQLTEHIKTHTGEKPFRCKVCARTFRNSSCLKTHFRIHTGIKPYKCNYCGKAFTARSG :::::::::::::::::::::::::::.::::::::::::::: :::::::: gi|531 IKTHTGEKPFRCKVCARTFRNSSCLKTNFRIHTGIKPYKCNYCWKAFTARSG 10 20 30 40 50 70 80 90 100 110 120 mKIAA4 LTKHVLIHNGEKPYECKECGKAFSTSSGLVEHIRIHTGEKPFECYQCGKALAHSSSLVGH :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|531 LTKHVLIHNGEKPYECKECGKAFSTSSGLVEHIRIHTGEKPFECYQCGKALVHSSSLVGH 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA4 LRTHTGEKPFECNQCDKTFTRSSYLRIHMRTHTGEKPYECKECGKTFPERSCLTKHIRTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|531 LRTHTGEKPFECNQCDKTFTRSSYLRIHMRTHTGEKPYECKECGKTFPERSCLTKHIRTH 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA4 TGERPYECKECGKGFISFAQLTVHIKTHSSERPFQCKVCTKSFRNSSSLETHFRIHTGVK ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|531 TGERPYECKECDKGFISFAQLTVHIKTHSSERPFQCKVCTKSFRNSSSLETHFRIHTGVK 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA4 PYKCSYCGKAFTARSGLTIHLRNHTGEKSYACQECGKAFSTSSGLIAHIRSHKGEKPFEC :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: gi|531 PYKCSYCGKAFTARSGPTIHLRNHTGEKSYACQECGKAFSTSSGLIAHIRSHKGEKPFEC 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA4 DHCGKAFASSSYLNVHLKIHTGEKPFQCTVCGKTFTCSSYLPVHMRTHTGEKPFQCIICG ::::::: ::::::::::::::::::.::::::::::::::::::::::: .::.::::: gi|531 DHCGKAFPSSSYLNVHLKIHTGEKPFRCTVCGKTFTCSSYLPVHMRTHTGGRPFRCIICG 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA4 KSFLWSSYLRVHMRIHTGEKPYVCQYCGKAFTEHSGLNKHLRKHTGEKPYEYKECGENFT .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|531 RSFLWSSYLRVHMRIHTGEKPYVCQYCGKAFTEHSGLNKHLRKHTGEKPYEYKECGENFT 360 370 380 390 400 410 430 mKIAA4 TSADANEHETPHWGENL ::::::::::::::. gi|531 TSADANEHETPHWGDL 420 >>gi|74194406|dbj|BAE24702.1| unnamed protein product [M (754 aa) initn: 3490 init1: 1999 opt: 2009 Z-score: 2352.6 bits: 445.2 E(): 2.5e-122 Smith-Waterman score: 2009; 63.741% identity (81.524% similar) in 433 aa overlap (5-437:322-752) 10 20 30 mKIAA4 SFAQLTEHIKTHTGEKPFRCKVCARTFRNSSCLK ::.:.:::: ::::.::::.. :::::::. gi|741 ANLNIHMRTHTGEKPYQCKECGKAFSRCYPLTQHLKTHTEEKPFECKVCGKCFRNSSCLN 300 310 320 330 340 350 40 50 60 70 80 90 mKIAA4 THFRIHTGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLVEHIR :::.:::::::::. ::::::.::::.::. :.:::::::::::::: ..:::..:.. gi|741 DHFRVHTGIKPYKCKDCGKAFTGRSGLSKHLPTHTGEKPYECKECGKAFPSTSGLIKHMK 360 370 380 390 400 410 100 110 120 130 140 150 mKIAA4 IHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMRTHTG : ::.:::: .::::.: ::.:. :::::::::::::. : :.:: ::::::::::::: gi|741 SHMGERPFECDHCGKAFASSSTLITHLRTHTGEKPFECQVCGKAFTCSSYLRIHMRTHTG 420 430 440 450 460 470 160 170 180 190 200 210 mKIAA4 EKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSSERPF :::: :::::..: ::. ::::.:::::: :.::. :::.: . : ::.::..:.:. gi|741 EKPYVCKECGRAFTERTSLTKHLRTHTGENPFECNMCGKAFACSSYLHNHIRTHTGEKPY 480 490 500 510 520 530 220 230 240 250 260 270 mKIAA4 QCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSYACQE :: : :.: :: : : ::::: ::.:: ::::::.::::: :.:.::::: : :.: gi|741 VCKECGKAFTVSSHLSKHVRIHTGEKPHKCEECGKAFTVRSGLTKHIRTHTGEKPYNCKE 540 550 560 570 580 590 280 290 300 310 320 330 mKIAA4 CGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTVCGKT :::::.:::::. : ::: ::::.:::.::::::::::: .::.::::::::.:. :::. gi|741 CGKAFTTSSGLLEHKRSHTGEKPYECDQCGKAFASSSYLIAHLRIHTGEKPFECNECGKA 600 610 620 630 640 650 340 350 360 370 380 390 mKIAA4 FTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKAFTEH ::::::: .::::::::::..: :::.: :.: :.:::.::: :.:. : ::.. gi|741 FTCSSYLHIHMRTHTGEKPYDCKECGKTFAVYSHLSKHVRIHSGEKAYTCKSDGIAFSR- 660 670 680 690 700 710 400 410 420 430 mKIAA4 SGLNKHLRKHTGEKPYEYKECGENFTTSADANEHETPHWGENL : ..::.. .. .: . .: . : . .: :.: gi|741 SHRTEHLKSLEINSFVGGNEE-TALESSIALTVHPNSQWQESLSV 720 730 740 750 >>gi|149020581|gb|EDL78386.1| rCG31761, isoform CRA_b [R (749 aa) initn: 3477 init1: 1982 opt: 2004 Z-score: 2346.8 bits: 444.1 E(): 5.2e-122 Smith-Waterman score: 2004; 67.337% identity (84.925% similar) in 398 aa overlap (5-402:317-713) 10 20 30 mKIAA4 SFAQLTEHIKTHTGEKPFRCKVCARTFRNSSCLK ::.:.:::: ::::.::::.. :::::::. gi|149 ANLNIHMRSHTGEKPYQCKECGKAFSRCYPLTQHLKTHTEEKPFECKVCGKCFRNSSCLN 290 300 310 320 330 340 40 50 60 70 80 90 mKIAA4 THFRIHTGIKPYKCNYCGKAFTARSGLTKHVLIHNGEKPYECKECGKAFSTSSGLVEHIR :::.:::::::::. ::::::.::::.::. :.::::::::::::::...:::..:.. gi|149 DHFRVHTGIKPYKCKDCGKAFTGRSGLSKHLPTHTGEKPYECKECGKAFTSTSGLIKHMK 350 360 370 380 390 400 100 110 120 130 140 150 mKIAA4 IHTGEKPFECYQCGKALAHSSSLVGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMRTHTG : ::.:::: .::::.: ::.:. :::::::::::::. : :.:. ::::::::::::: gi|149 SHMGERPFECDHCGKAFASSSTLITHLRTHTGEKPFECKVCGKAFACSSYLRIHMRTHTG 410 420 430 440 450 460 160 170 180 190 200 210 mKIAA4 EKPYECKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKTHSSERPF :::: :::::..: ::. ::::.:::::: :.::. :::.: . : ::.::..:.:. gi|149 EKPYVCKECGRAFTERTSLTKHLRTHTGENPFECNVCGKAFACSSYLHNHIRTHTGEKPY 470 480 490 500 510 520 220 230 240 250 260 270 mKIAA4 QCKVCTKSFRNSSSLETHFRIHTGVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSYACQE :: : :.: :: : :.::::: ::.:: ::::::.::::: :.:.::::: : :.: gi|149 VCKECGKAFTVSSHLSKHIRIHTGEKPHKCEECGKAFTVRSGLTKHIRTHTGEKPYNCKE 530 540 550 560 570 580 280 290 300 310 320 330 mKIAA4 CGKAFSTSSGLIAHIRSHKGEKPFECDHCGKAFASSSYLNVHLKIHTGEKPFQCTVCGKT :::::.:::::. :.::: ::::.:::.::::::::::: .::.::::::::.: :::. gi|149 CGKAFTTSSGLLEHMRSHTGEKPYECDQCGKAFASSSYLIAHLRIHTGEKPFECKECGKA 590 600 610 620 630 640 340 350 360 370 380 390 mKIAA4 FTCSSYLPVHMRTHTGEKPFQCIICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKAFTEH ::::::: .::::::::::..: :::.: :.: :.::: ::: :.:. : .:. : gi|149 FTCSSYLHIHMRTHTGEKPYDCKECGKAFAVYSHLSKHVRIHGGEKAYTCKSDGIVFN-H 650 660 670 680 690 700 400 410 420 430 mKIAA4 SGLNKHLRKHTGEKPYEYKECGENFTTSADANEHETPHWGENL : ..:.. gi|149 SHCKEHIKNLEINSLVGRNEETALERSIALAVHPNSQWQERLSV 710 720 730 740 437 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Wed Mar 18 01:12:28 2009 done: Wed Mar 18 01:18:46 2009 Total Scan time: 859.530 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]