FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4186.ptfa, 899 aa vs ./tmplib.26680 library 1768118 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.5471+/-0.00579; mu= 9.8707+/- 0.385 mean_var=188.0763+/-45.100, 0's: 0 Z-trim: 19 B-trim: 0 in 0/36 Lambda= 0.0935 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mFLJ00307 ( 516 res) mtg01156 ( 516) 292 52 1.9e-07 mFLJ00227 ( 590 res) mtk02576 ( 590) 251 47 9.7e-06 mKIAA4194 ( 320 res) mbg12940 ( 320) 230 44 4.8e-05 mKIAA1597 ( 407 res) mnh09216 ( 407) 215 42 0.00022 mKIAA1342 ( 499 res) mid23032 ( 499) 209 41 0.00045 mKIAA0751 ( 1297 res) mpg01166 (1297) 204 41 0.0013 mKIAA0340 ( 983 res) mbg15521 ( 983) 192 39 0.0033 mKIAA1256 ( 1539 res) mbg11030 (1539) 190 39 0.0053 mKIAA0985 ( 684 res) mbp05185 ( 684) 182 38 0.0068 >>mFLJ00307 ( 516 res) mtg01156 (516 aa) initn: 158 init1: 158 opt: 292 Z-score: 225.9 bits: 52.2 E(): 1.9e-07 Smith-Waterman score: 297; 29.915% identity (34.653% ungapped) in 234 aa overlap (675-896:237-450) 650 660 670 680 690 700 mKIAA4 PASYIKGASKSIDNISAATTDPEPMPEPQGPGPEPKGKDSARGLCESPGKKKNPATTFLT : : : .... : : .: :.: mFLJ00 RKFPTAGRRETAGAKLLQSYQRLSKISVVPPTPPPFSESQ----CSSSVQK---ASTPDI 210 220 230 240 250 710 720 730 740 750 760 mKIAA4 VPGLHSPGPIKSPRPMSRPAFPFAWPLTRVAPS----MSSLNSLASSCFDLTDVSLNTEA . ..:. : . : :. . : . : .. : .:: :. :.: :: mFLJ00 LKAFHQEDPKHPPDPVLKQDTPPSSPTHSAVFSGGLRHGSLISINSTC---------TEM 260 270 280 290 300 310 770 780 790 800 810 mKIAA4 GDSRQGRL-GEIQLTVRYVCLRHC-LRVLVNGCRNLT--PCTSSGADPYVRIYLLPERRW :. .. . :::.....: :.. : :.. .. :.::. . .:::. ::::.: mFLJ00 GNFDNANVTGEIEFAIHY-CVKSCSLEICIKTCKNLAYGEEKKRKCNPYVKTYLLPDRSS 320 330 340 350 360 820 830 840 850 860 870 mKIAA4 ASRKKTSVKQKTLEPLFDETFEFFVPMGEVQKRSLDVAVKNSRPLGS-HRRKELGKVLID ...:: :...::.: :.::... : :... : :.:.: . ::. :: ::.:.. mFLJ00 QGKRKTRVQKNTLDPTFEETLKYQVDPGQLMTRRLQVSVWH---LGTLARRVFLGEVILP 370 380 390 400 410 420 880 890 mKIAA4 LSKQDLIKGFSQ---WYELTADGQPRS :. :. . .: :: : : .. mFLJ00 LAMWDFKDSTAQNARWYPLRAKAEKYEENIPQNNGELAVRAKLVLPAGPRKPQEAQEGQL 430 440 450 460 470 480 >>mFLJ00227 ( 590 res) mtk02576 (590 aa) initn: 270 init1: 145 opt: 251 Z-score: 195.4 bits: 46.7 E(): 9.7e-06 Smith-Waterman score: 267; 29.431% identity (34.241% ungapped) in 299 aa overlap (628-898:132-416) 600 610 620 630 640 650 mKIAA4 GRELGSPYTGPDALKKGPLFIKKVATNQGCKAPPLNEGL-ADVTSTSNPASYIKGASKSI :.: ...: .: . . . :.: .: mFLJ00 TGDWFQEARSQRHHHAHFGSDLVRASIRRKKSPKGDQALGSDGEAEAAGENTIEGEPES- 110 120 130 140 150 160 660 670 680 690 mKIAA4 DNISAATTDPEPMPEPQGP-------------GPEPKGKDSARGLCESPGK------KKN .: .. :: : ::: : : . .:. : :.::. . . mFLJ00 -RVSIEVAAPERNTETQGPDLFSPYVPSKASEGQEEEPQDQECEL-EAPGEGGVQVAEAD 170 180 190 200 210 700 710 720 730 740 750 mKIAA4 PATTFLTVPGLHS-PGPIKSPRPMSR-----PAFPFAWP-LTRVAPSMSSLNSLASSCFD : .: : : .: . :. : : : :. : ::..:: :: .. mFLJ00 PELDPEQKAEQESQPTPAQS-KATSKILENGEEAPGLGPSLDRMLSSSSSVSSLNSSTLS 220 230 240 250 260 270 760 770 780 790 800 mKIAA4 LTDVSLNTEA-GDSRQGRLGEIQLTVRYVCLRHCLRVLVNGCRNLTPCTSSGADPYVRIY . .::. :: . . : : : . ...:: ::: : :..:. .::::. : mFLJ00 GSLMSLSGEAEAGTVQVR-GSVLFSLRYEPGTSELRVQVIQCQGLAAARRRRSDPYVKSY 280 290 300 310 320 330 810 820 830 840 850 860 mKIAA4 LLPERRWASRKKTSVKQKTLEPLFDETFEFFVPMGEVQKRSLDVAVKNSRPLGSHRRKEL :::... :..:::::...:.:.:.::.. : .... : :...: . . :: : : mFLJ00 LLPDKQ--SKRKTSVKKRNLNPIFNETLRHSVQQADLPGRVLSLSVWHRESLG--RNIFL 340 350 360 370 380 390 870 880 890 mKIAA4 GKVLIDLSKQDLIKGFSQWYELTADGQPRS :.: . :. . . . : : ::: mFLJ00 GEVEVPLDTWNW-DSEATWLPL----QPRVPPSPDELPSRGLLSLSLKYVPAGSEGGGQP 400 410 420 430 440 >>mKIAA4194 ( 320 res) mbg12940 (320 aa) initn: 262 init1: 175 opt: 230 Z-score: 183.0 bits: 43.6 E(): 4.8e-05 Smith-Waterman score: 230; 30.556% identity (32.353% ungapped) in 144 aa overlap (757-898:160-297) 730 740 750 760 770 780 mKIAA4 FAWPLTRVAPSMSSLNSLASSCFDLTDVSLNTEAGDSRQG-RLGEIQLTVRYVCLRHCLR . ..:.... .::.: ..::: : mKIAA4 FDRFSKHDIIGEVKVPMNTVDLGQPIEEWRDLQGGEKEEPEKLGDICTSLRYVPTAGKLT 130 140 150 160 170 180 790 800 810 820 830 840 mKIAA4 VLVNGCRNLTPCTSSG-ADPYVRIYLLPERRWASRKKTSVKQKTLEPLFDETFEFFVPMG : . .:: .: .::::.:.:. . . ..:::.::.:::.: :.:.: : .:. mKIAA4 VCILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTVKKKTLNPYFNESFSFEIPFE 190 200 210 220 230 240 850 860 870 880 890 mKIAA4 EVQKRSLDVAVKNSRPLGSHRRKELGKVLIDLSKQDLIKGFSQWYELTADGQPRS ..:: .. :.: . :: . . .::... . . .: .. :. :: mKIAA4 QIQKVQVVVTVLDYDKLG--KNEAIGKIFVGSNATGT--ELRHWSDMLAN--PRRPIAQW 250 260 270 280 290 300 mKIAA4 HSLKPEEEVDALLGKNK 310 320 >>mKIAA1597 ( 407 res) mnh09216 (407 aa) initn: 176 init1: 123 opt: 215 Z-score: 170.9 bits: 41.7 E(): 0.00022 Smith-Waterman score: 215; 30.601% identity (33.735% ungapped) in 183 aa overlap (728-897:56-234) 700 710 720 730 740 750 mKIAA4 PATTFLTVPGLHSPGPIKSPRPMSRPAFPFAWPLTRVAPSMSSLNSLASSC--FDLTDVS .. : : : :::..:.:: .:...: mKIAA1 PDKLKRMSKSVPAFLQDESDDRETDTASESSYQLRRYKKSPSSLTNLSSSSGMTSLSSAS 30 40 50 60 70 80 760 770 780 790 800 mKIAA4 ---LNTEAGDSRQGRL---GEIQLTVRYVCLRHCLRVLVNGCRNLTPCT--SSGADPYVR ... .:: : : : .:... :: . :.:.: :..:. .. .::::. mKIAA1 GSVMSVYSGDF--GNLEVKGSVQFALDYVESLKELHVFVAQCKDLAAADVKKQRSDPYVK 90 100 110 120 130 140 810 820 830 840 850 860 mKIAA4 IYLLPERRWASRKKTSVKQKTLEPLFDETFEFFVPMGEVQKRSLDVAVKNSRPLGSHRRK ::::.. ..::: : .:::.:...: ... . .. ..:...: . . .: . mKIAA1 TYLLPDKGKMGKKKTLVVKKTLNPVYNEILRYKIERQFLKTQKLNLSVWHRDTF--KRNS 150 160 170 180 190 200 870 880 890 mKIAA4 ELGKVLIDLSKQDL-IKGFSQ--WYELTADGQPRS ::.: .:: : : .: :: : : mKIAA1 FLGEVELDLETWDWDSKQNKQLKWYPLKRKTAPVALETENRGEMKLALQYVPEPSPGKKL 210 220 230 240 250 260 mKIAA1 PTTGEVHIWVKECLDLPLLRGSHLNSFVKCTILPDTSRKSRQKTRAVGKTTNPVFNHTMV 270 280 290 300 310 320 >>mKIAA1342 ( 499 res) mid23032 (499 aa) initn: 169 init1: 88 opt: 209 Z-score: 165.5 bits: 41.0 E(): 0.00045 Smith-Waterman score: 210; 29.148% identity (32.828% ungapped) in 223 aa overlap (670-884:138-343) 640 650 660 670 680 690 mKIAA4 TSTSNPASYIKGASKSIDNISAATTDPEPMPEPQGPGPEPKGKDSARGLCESPGKKKNPA :: . . : :.. : :: : mKIAA1 AWICCQRRSAKSNKTPPYKFVHVLKGVDIYPENLSSKKKFGGDDKS----EVKGKAALPN 110 120 130 140 150 160 700 710 720 730 740 750 mKIAA4 TTF---LTVPGLHSPGPIKSPRPMSRPAFPFAWP--LTRVAPSMSSLNSLASSCFDLTDV .. : :.. : .:. : . . : .:.. .: .:: :: . mKIAA1 LSLHLDLEKRDLNGNFPKANPKAGSSSDLENVTPKLFTETEKEANSPESLKSS------T 170 180 190 200 210 760 770 780 790 800 810 mKIAA4 SLNTEAGDSRQGRLGEIQLTVRYVCLRHCLRVLVNGCRNLTPCT--SSGADPYVRIYLLP ::..: .: .:: . :...: .. . : .. ..: : .:::... .:: mKIAA1 SLTSEE---KQEKLGTLFLSLEYNFEKKAFVVNIKEAQGLPAMDEQSMTSDPYIKMTILP 220 230 240 250 260 270 820 830 840 850 860 870 mKIAA4 ERRWASRKKTSVKQKTLEPLFDETFEFF-VPMGEVQKRSLDVAVKNSRPLGSHRRKELGK :.. : :: : .:::.:.::::: :. .:. ..:. :: .: . .. : .:. mKIAA1 EKK--HRVKTRVLRKTLDPVFDETFTFYGIPYPHIQELSLHFTVLSFDRFS--RDDVIGE 280 290 300 310 320 330 880 890 mKIAA4 VLIDLSKQDLIKGFSQWYELTADGQPRS ::: :: .: : mKIAA1 VLIPLSGIELSDGKMLMTREIIKRNAKKSSGRGELLVSLCYQSTTNTLTVVVLKARHLPK 340 350 360 370 380 390 >>mKIAA0751 ( 1297 res) mpg01166 (1297 aa) initn: 217 init1: 120 opt: 204 Z-score: 157.3 bits: 40.8 E(): 0.0013 Smith-Waterman score: 204; 27.869% identity (30.357% ungapped) in 183 aa overlap (720-891:442-620) 690 700 710 720 730 740 mKIAA4 ESPGKKKNPATTFLTVPGLHSPGPIKSPRPMSRPA--FPFAWPLTRVAPSMSSLNSLASS .::: .: : . : :: .:. :. mKIAA0 WNGRLLQGATFEEVYNIILESKPEPQVELVVSRPIGDIPRI-PDSTHAQLESSSSSFESQ 420 430 440 450 460 470 750 760 770 780 790 800 mKIAA4 CFDLTDVSLNTEAG-----DSRQGRLGEIQLTVRYVCLRHCLRVLVNGCRNLTPCTSSG- .: ..:... . : : :.... . . . : : : . : ..: : .: mKIAA0 KMDRPSISVTSPMSPGMLRDVPQFLSGQLSIKLWFDKVGHQLIVTILGAKDL-PSREDGR 480 490 500 510 520 810 820 830 840 850 mKIAA4 -ADPYVRIYLLPERRWASRKKTSVKQKTLEPLFDETFEFFVPMG--EVQKRSLDVAVKNS .:::.::.::.: ....:.. .::::: ...:: .. :. : ..: :.... .. mKIAA0 PRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTF-IYSPVHRREFRERMLEITLWDQ 530 540 550 560 570 580 860 870 880 890 mKIAA4 RPLGSHRRKELGKVLIDLSKQDLIKGFSQWYELTADGQPRS . .. . ::..::.: . :. .::.: mKIAA0 ARVREEESEFLGEILIEL-ETALLDDEPHWYKLQTHDVSSLPLPRPSPYLPRRQLHGESP 590 600 610 620 630 640 mKIAA0 TRRLQRSKRISDSEVSDYDCEDGVGVVSDYRHNGRDLQSSTLSVPEQVMSSNHCSPSGSP 650 660 670 680 690 700 >>mKIAA0340 ( 983 res) mbg15521 (983 aa) initn: 183 init1: 116 opt: 192 Z-score: 149.9 bits: 39.1 E(): 0.0033 Smith-Waterman score: 192; 28.177% identity (30.000% ungapped) in 181 aa overlap (720-891:501-679) 690 700 710 720 730 740 mKIAA4 ESPGKKKNPATTFLTVPGLHSPGPIKSPRPMSRPA--FPFAWPLTRVAPSMSSLNSLASS .::: .: : . : :: .:. :. mKIAA0 WNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRI-PESSHPPLESSSSSFESQ 480 490 500 510 520 750 760 770 780 790 800 mKIAA4 CFDLTDVSL--NTEAG---DSRQGRLGEIQLTVRYVCLRHCLRVLVNGCRNLTP-CTSSG .. ..:. : : :. : :.... . : . : : : : .: : . mKIAA0 KMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRP 530 540 550 560 570 580 810 820 830 840 850 860 mKIAA4 ADPYVRIYLLPERRWASRKKTSVKQKTLEPLFDETFEF-FVPMGEVQKRSLDVAVKNSRP .:::..:.::.: :...:.. .: ::: ...:: . : . ..: :...: .. mKIAA0 RNPYVKMYFLPDRSDKSKRRTKTVKKLLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPR 590 600 610 620 630 640 870 880 890 mKIAA4 LGSHRRKELGKVLIDLSKQDLIKGFSQWYELTADGQPRS . ... . ::..::.: . :. .::.: mKIAA0 VQDEESEFLGEILIEL-ETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSK 650 660 670 680 690 700 mKIAA0 KLQRSQRISDSDISDYEVDDGIGVVPPVGYRASARESKATTLTVPEQQRTTHHRSRSVSP 710 720 730 740 750 760 >>mKIAA1256 ( 1539 res) mbg11030 (1539 aa) initn: 214 init1: 115 opt: 190 Z-score: 146.3 bits: 39.1 E(): 0.0053 Smith-Waterman score: 190; 24.670% identity (26.923% ungapped) in 227 aa overlap (189-405:1278-1495) 160 170 180 190 200 210 mKIAA4 KIREKSIHLRTFTFTKLYFGQKCPKVNGVKVHTDKRNRRKVTLDLQICYIGDCEISVELQ .:. : . : . .:. ..: . . : mKIAA1 EWIQAHVQCEGLAEQLIFNSLTNCLGPRKLLHSGKLYKTKSNKELHAFLFNDFLLLTYLV 1250 1260 1270 1280 1290 1300 220 230 240 250 260 270 mKIAA4 KIRGGVSG------VQLQGTLRVILEPLLVDKPFIGAVTVFFLQKPHLQINWTGLTNLLD . ...:: . .. .:. :..... .. : ..: ..:. . : mKIAA1 RQFAAASGHEKLFNSKSSAQFRMYKTPIFLNEVLVKLPTDPSSDEPVFHISHIDRVYTLR 1310 1320 1330 1340 1350 1360 280 290 300 310 320 330 mKIAA4 MPGINELSDSLLEDLIAAHLVLPNRVTVPVKKGLDVTNLRVPLPCGVIR--VHLLEAKKL .::: . . .. . .: . . . :: . . : :. : ::..:: .: mKIAA1 TDNINERT-AWVQKIKGAS---EQYIDTEKKKREKAYQARSQKTSGIGRLMVHVIEATEL 1370 1380 1390 1400 1410 1420 340 350 360 370 380 mKIAA4 -AQKDNFLGLGGKSDPYAKVSIGLQHCRSRTIYKNLNPTWNEVFEFMVYEVPGQDLEVDL : : : :::.:: .::.: : .::. .::: :: .:.. .. . : . . mKIAA1 KACKPN-----GKSNPYCEVSMGSQSYTTRTLQDTLNPKWNFNCQFFIKDLYQDVLCLTM 1430 1440 1450 1460 1470 390 400 410 420 430 440 mKIAA4 YDEDT-DKDDFLGSLQICLGDVMKNRVVDEWFALNDTTSGRLHLRLEWLSLLTDQEALTE .:.: . ::::: .. mKIAA1 FDRDQFSPDDFLGRTEVPVAKIRTEQESKGPTTRRLLLHEVPTGEVWVRFDLQLFEQKTL 1480 1490 1500 1510 1520 1530 >>mKIAA0985 ( 684 res) mbp05185 (684 aa) initn: 276 init1: 149 opt: 182 Z-score: 144.3 bits: 37.5 E(): 0.0068 Smith-Waterman score: 217; 23.024% identity (25.475% ungapped) in 291 aa overlap (608-878:211-493) 580 590 600 610 620 630 mKIAA4 HSGLDSLISMRLVLRFLRVEGRELGSPYTGPDALKKGPLFIKKVATNQGCKAPPLNEG-- : . : :: . . : ..: ..:: .. mKIAA0 AGEPATQEQPTPESRHPARAPARGDMEDRRPPGQKPGPDLTS--APGRGSHGPPTRRASE 190 200 210 220 230 640 650 660 670 680 mKIAA4 --LADVTSTSNPASYIKGA-----SKS------IDNISAATTDPEPMPEPQGPGPEPKGK .. .. :. .. .:. :.: ....:: : :.: : : : : mKIAA0 ARMSTAARDSEGWDHAHGGGTGDTSRSPAGLRRANSVQAARPAPAPVPSPAPPQPVQPGP 240 250 260 270 280 290 690 700 710 720 730 mKIAA4 DSARGLCESPGKKKNPATTFLTVPGLHS-PGPIKSPRPM-SRPAFPF-AWPLTRVAPSMS . : .:: . : . . :. . :: . : . :: : : : : .:: . mKIAA0 PG--GSRATPGPGRFPEQSTEAPPSDPGYPGAVAPAREERTGPAGGFQAAPHT-AAPYSQ 300 310 320 330 340 350 740 750 760 770 780 790 mKIAA4 SLNSLASSCFDLTDVSLNTEAGDSRQGRLGEIQLTVRYVCLRHCLRVLVNGCRNLTPCTS . . . . :. .: . :: ..... : :. . ..: : : mKIAA0 AAPARQPPPAEEEEEEANSYDSD-EATTLGALEFSLLYDQDNSNLQCTIIRAKGLKPMDS 360 370 380 390 400 410 800 810 820 830 840 850 mKIAA4 SG-ADPYVRIYLLPERRWASRKKTSVKQKTLEPLFDETFEFF-VPMGEVQKRSLDVAVKN .: :::::...::: ... .:.. ..: .:...::... . ..:...: ..: . mKIAA0 NGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCD 420 430 440 450 460 470 860 870 880 890 mKIAA4 SRPLGSHRRKELGKVLIDLSKQDLIKGFSQWYELTADGQPRS .: . . .:.. ..:.: mKIAA0 EDKFGHN--EFIGETRFSLKKLKANQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQV 480 490 500 510 520 530 899 residues in 1 query sequences 1768118 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 11:04:25 2006 done: Mon Mar 27 11:04:27 2006 Scan time: 1.000 Display time: 0.220 Function used was FASTA [version 3.4t11 Apr 17, 2002]