Comparison of KIAA cDNA sequences between mouse and human (KIAA1878)

<<Original sequence data>>

mouse  mKIAA1878 (mfj00027)     length:   4035 bp, CDS:     1 -   936
human   KIAA1878  (pj01649)     length:   4328 bp, CDS:    24 -  1385

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:        -           -        -          -
  CDS:    432 -  1422     589      321      35.3
3'UTR:   1423 -  4598    1290     1636      55.9

amino acid

  CDS:    432 -  1422     150      168      52.8
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
mfj00027     1 .................................................. 1
                                                                 
pj01649      1 AAGATTATAGAGACTTGCTTTAGAACCACAAGAAGAAAGAGGAGGCCGGC 50
                                      N  H  K  K  K  E  E  A  G  

            51 ----+----*----+----*----+----*----+----*----+----* 100
mfj00027     1 .................................................. 1
                                                                 
pj01649     51 TTTTCAGCTAGCATCATGGCGTGGCCGTGCATCACGAGGGCCTGCTGCAT 100
               F  S  A  S  I  M  A  W  P  C  I  T  R  A  C  C  I 

           101 ----+----*----+----*----+----*----+----*----+----* 150
mfj00027     1 .................................................. 1
                                                                 
pj01649    101 CGCCCGCTTCTGGAACCAGTTGGACAAAGCGGACATCGCTGTGCCGCTGG 150
                A  R  F  W  N  Q  L  D  K  A  D  I  A  V  P  L  V

           151 ----+----*----+----*----+----*----+----*----+----* 200
mfj00027     1 .................................................. 1
                                                                 
pj01649    151 TTTTCACCAAGTACTCGGAGGCCACCGAGCACCCGGGCGCCCCGCCGCAG 200
                 F  T  K  Y  S  E  A  T  E  H  P  G  A  P  P  Q  

           201 ----+----*----+----*----+----*----+----*----+----* 250
mfj00027     1 .................................................. 1
                                                                 
pj01649    201 CCACCGCCGCCGCAGCAGCAGGCGCAGCCGGCGCTCGCGCCCCCCTCGGC 250
               P  P  P  P  Q  Q  Q  A  Q  P  A  L  A  P  P  S  A 

           251 ----+----*----+----*----+----*----+----*----+----* 300
mfj00027     1 .................................................. 1
                                                                 
pj01649    251 GCGCGCGGTTGCCATAGAGACGCAGCCAGCCCAGGGCGAGTTGGATGCAG 300
                R  A  V  A  I  E  T  Q  P  A  Q  G  E  L  D  A  V

           301 ----+----*----+----*----+----*----+----*----+----* 350
mfj00027     1 .................................................. 1
                                                                 
pj01649    301 TTGCCCGGGCAACGGGGCCAGCGCCTGGGCCTACCGGCGAGCGCGAGCCG 350
                 A  R  A  T  G  P  A  P  G  P  T  G  E  R  E  P  

           351 ----+----*----+----*----+----*----+----*----+----* 400
mfj00027     1 .................................................. 1
                                                                 
pj01649    351 GCGGCGGGCCCCGGCCGGAGCGGGCCGGGCCCGGGCCTGGGCTCCGGCTC 400
               A  A  G  P  G  R  S  G  P  G  P  G  L  G  S  G  S 

           401 ----+----*----+----*----+----*----+----*----+----* 450
                                              Q  D  Y  R  A  W  K
mfj00027     1 ...............................CAGGACTACCGCGCCTGGA 19
                                              ||||| ||||| |||||||
pj01649    401 CACCTCCGGCCCCGCGGACTCGGTGATGCGGCAGGATTACCGAGCCTGGA 450
                T  S  G  P  A  D  S  V  M  R  Q  D  Y  R  A  W  K

           451 ----+----*----+----*----+----*----+----*----+----* 500
                 V  Q  R  P  E  P  S  C  R  P  R  S  E  Y  Q  P  
mfj00027    20 AAGTGCAGCGGCCCGAGCCAAGCTGCCGGCCGCGCAGCGAGTACCAGCCG 69
               | ||||||||||||||||| |||||||||||||||||||| |||||||| 
pj01649    451 AGGTGCAGCGGCCCGAGCCCAGCTGCCGGCCGCGCAGCGAATACCAGCCC 500
                 V  Q  R  P  E  P  S  C  R  P  R  S  E  Y  Q  P  

           501 ----+----*----+----*----+----*----+----*----+----* 550
               S  D  A  P  F  E  R  E  T  Q  Y  Q  K  D  F  R  A 
mfj00027    70 TCCGACGCGCCCTTCGAGCGCGAGACCCAGTACCAGAAGGACTTCCGCGC 119
               |||||||| |||||||||||||||||||||||||||||||||||||||||
pj01649    501 TCCGACGCTCCCTTCGAGCGCGAGACCCAGTACCAGAAGGACTTCCGCGC 550
               S  D  A  P  F  E  R  E  T  Q  Y  Q  K  D  F  R  A 

           551 ----+----*----+----*----+----*----+----*----+----* 600
                W  P  L  P  R  R  G  D  H  P  W  I  P  K  P  V  Q
mfj00027   120 CTGGCCGCTGCCCCGGCGCGGGGACCATCCCTGGATCCCCAAGCCGGTGC 169
               |||||||||||| || ||||||||||| || |||||||||||||| ||||
pj01649    551 CTGGCCGCTGCCGCGCCGCGGGGACCACCCGTGGATCCCCAAGCCCGTGC 600
                W  P  L  P  R  R  G  D  H  P  W  I  P  K  P  V  Q

           601 ----+----*----+----*----+----*----+----*----+----* 650
                 I  P  A  T  S  Q  P  S  Q  P  V  L  G  V  P  K  
mfj00027   170 AAATCCCTGCGACTTCGCAGCCTTCCCAACCTGTTCTCGGGGTGCCCAAG 219
               | ||| ||||| | || ||| | ||    ||  ||||||||| |||||||
pj01649    601 AGATCTCTGCGGCCTCCCAGGCGTCGGCGCCCATTCTCGGGGCGCCCAAG 650
                 I  S  A  A  S  Q  A  S  A  P  I  L  G  A  P  K  

           651 ----+----*----+----*----+----*----+----*----+----* 700
               R  R  P  Q  S  Q  E  R  G  P  M  Q  L  S  A  D  A 
mfj00027   220 CGTCGGCCTCAGAGCCAAGAGCGCGGGCCCATGCAACTTTCTGCTGATGC 269
               || ||||| |||||||| |||||| ||||  ||||     | ||||| ||
pj01649    651 CGCCGGCCGCAGAGCCAGGAGCGCTGGCCAGTGCAGGCCGCCGCTGAGGC 700
               R  R  P  Q  S  Q  E  R  W  P  V  Q  A  A  A  E  A 

           701 ----+----*----+----*----+----*----+----*----+----* 750
                R  D  P  E  G  -     G  G  A  G  V  L  A  A  G  K
mfj00027   270 CCGGGACCCGGAGGGTG...CTGGAGGAGCCGGGGTGCTGGCGGCAGGAA 316
               |||||| | |||||  |   | || ||||| || |  |||||||| ||||
pj01649    701 CCGGGAGCAGGAGGCGGCCCCCGGCGGAGCGGGTGGCCTGGCGGCCGGAA 750
                R  E  Q  E  A  A  P  G  G  A  G  G  L  A  A  G  K

           751 ----+----*----+----*----+----*----+----*----+----* 800
                 A  S  G  V  D  Q  R  D  T  R  R  K  A  G  P  A  
mfj00027   317 AGGCGTCCGGTGTAGACCAGCGCGACACACGTAGGAAGGCAGGGCCAGCA 366
               |||||||||| |  ||| |||||||||| || |||||||| ||||| || 
pj01649    751 AGGCGTCCGGGGCGGACGAGCGCGACACGCGCAGGAAGGCCGGGCCTGCC 800
                 A  S  G  A  D  E  R  D  T  R  R  K  A  G  P  A  

           801 ----+----*----+----*----+----*----+----*----+----* 850
               W  M  V  T  R  N  -        G  H  E  E  K  P  L  P 
mfj00027   367 TGGATGGTGACTCGCAACGA......AGGGCACGAAGAGAAGCCTCTGCC 410
               |||||||||   |||  |||       ||||||||  ||| ||| |||||
pj01649    801 TGGATGGTGCGCCGCGCCGAGGGCCTGGGGCACGAGCAGACGCCGCTGCC 850
               W  M  V  R  R  A  E  G  L  G  H  E  Q  T  P  L  P 

           851 ----+----*----+----*----+----*----+----*----+----* 900
                P  A  Q  S  Q  T  Q  E  G  G  P  A  A  G  K  A  S
mfj00027   411 CCCAGCCCAATCCCAGACCCAGGAGGGTGGTCCTGCAGCTGGAAAGGCGT 460
               | | |||||  |||||  |||||     || || |  ||||| | || | 
pj01649    851 CGCGGCCCAGGCCCAGGTCCAGGCCACCGGCCCCGAGGCTGGCAGGGGGC 900
                A  A  Q  A  Q  V  Q  A  T  G  P  E  A  G  R  G  R

           901 ----+----*----+----*----+----*----+----*----+----* 950
                 G  A  D  -                                      
mfj00027   461 CCGGTGCAGATCA..................................... 473
                ||  || |   |                                     
pj01649    901 GCGCCGCGGCGGACGCCCTCAACCGGCAAATCCGCGAGGAGGTGGCGAGT 950
                 A  A  A  D  A  L  N  R  Q  I  R  E  E  V  A  S  

           951 ----+----*----+----*----+----*----+----*----+----* 1000
                     R  D  T  R  R  K  A  G  P  A  W  M    D  S  
mfj00027   474 .....GCGTGACACACGCAGGAAGGCAGGGCCAGCATGGATGGTGACTCG 518
                    | |   | |   |||||| | |      ||||||| |  |||   
pj01649    951 GCAGTGAGCAGCTCCTACAGGAATGAATTCAGGGCATGGACG..GACATC 998
               A  V  S  S  S  Y  R  N  E  F  R  A  W  T    D  I  

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
               Q  R  R  A  R  R  E  A    C  P  Q  P  N  P  R  P  
mfj00027   519 CAGCGAAGGGCACGAAGAGAAGCCTCTGCCCCCAGCCCAATCCCAGACCC 568
                |||    |  || || | | ||  |   ||||||  ||| |||  |   
pj01649    999 AAGCCTGTGAAACCAATAAAGGC..CAAGCCCCAGTACAAGCCCCCAGAT 1046
               K  P  V  K  P  I  K  A    K  P  Q  Y  K  P  P  D  

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
               R  R  V  V  L  Q     W  K  G  V  R  C  K      R  D
mfj00027   569 AGGAGGGTGGTCCTGCAG..CTGGAAAGGCGTCCGGTGCAGATCAGCGTG 616
                  | | |||| |   ||  | |  |  | |  | || ||    |  | |
pj01649   1047 GATAAGATGGTTCATGAGACCAGCTACAGTGCTCAGTTCA....AAGGAG 1092
               D  K  M  V  H  E  T  S  Y  S  A  Q  F  K      G  E

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
                 T  R  R  K  A  G  P  A  W  M  V  T         K  G 
mfj00027   617 ACACACGCAGGAAGGCTGGACCCGCGTGGATGGTGACTCGCACGGAAGGG 666
               |  |  ||| |    |   | | |     | ||| | |        |  |
pj01649   1093 AGGCCAGCAAGCCAACAACAGCTGACAATAAGGTCATT.......GATCG 1135
                 A  S  K  P  T  T  A  D  N  K  V  I         D  R 

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
                T  R  R  R  R  C  H           L  R  P  R  R  A  A
mfj00027   667 CACGAGGAGACGCCGCTGCCACCCGCCCAGTCTCAGACCCAGGAGGGCGG 716
               ||  || | |||| ||  | ||           |  ||||   | ||   
pj01649   1136 CAGAAGAATACGCAGCCTCTAC.........AGCGAACCCTTCAAGGAAC 1176
                R  R  I  R  S  L  Y           S  E  P  F  K  E  P

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
                 P  Q  L  E  R  H  L  V  Q  S       D  T  R  R  K
mfj00027   717 CCCCGCAGCTGGAAAGGCATCTGGTGCAGACGAGCGCGACACGAGGAGGA 766
               ||||  || ||||||  | |   || ||||     |   ||     |  |
pj01649   1177 CCCCAAAGGTGGAAAAACCTAGTGTTCAGA.....GTTCCAAACCAAAAA 1221
                 P  K  V  E  K  P  S  V  Q  S       S  K  P  K  K

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
                 A  G  P  A  W  M  V  R  R  S  E  G  H  E  Q  T  
mfj00027   767 AGGCGGGGCCGGCCTGGATGGTGCGTCGCTCGGAGGGGCACGAACAGACA 816
               || |     ||  |   | |       |   ||      || | ||| | 
pj01649   1222 AGACCTCAGCGAGCCATAAGCCCACGAGGAAGGCCAAAGACAAGCAGGCG 1271
                 T  S  A  S  H  K  P  T  R  K  A  K  D  K  Q  A  

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
               P  A  A  H  -     K  A  Q  G  L  K    G  K  G  R  
mfj00027   817 CCCGCTGCCCATGC..CCAAGGCACAGGGCCTGAAGGAGGCAAGGGGCGC 864
                   | | ||| ||  |||||  | || ||  | ||  |||  | |   |
pj01649   1272 GTGTCAGGCCAGGCTGCCAAGAAAAAGAGCGCGGAG..GGCCCGAGTACC 1319
               V  S  G  Q  A  A  K  K  K  S  A  E    G  P  S  T  

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
               A  V  A  D  A     N  R  Q  R     E  E  V  A  S  T 
mfj00027   865 GCGGTGGCAGATGCCCTCAACAGGCAAATCCGGGAGGAGGTGGCGAGTAC 914
                |   | |||| | |   ||   |||||   |  | ||| ||   | || 
pj01649   1320 ACCAAGCCAGACGAC...AAGGAGCAAA...GCAAAGAGATGAACAATAA 1363
               T  K  P  D  D     K  E  Q  S     K  E  M  N  N  K 

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
                      K  Q  L  L  Q                              
mfj00027   915 A....GTAAGCAGCTCTTACAGGTGAGACTGGGGCAGCAGGTGATGCTGG 960
               |     | ||  |       |  |    |||      |   | |  ||  
pj01649   1364 ACTGGCTGAGGCGAAAGAGTAAATTTCCCTGCACTTTCCTTTTACTCTTC 1413
                L  A  E  A  K  E  *                              

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
mfj00027   961 TCACCCTCATCCCCTCGCGAGGACCACCCATTCTACCCCCACACCGAAAG 1010
               || | |||  || | | | |          ||  | ||    | | ||| 
pj01649   1414 TCTCTCTCTCCCTCCCCCCAACTTTTTTTTTTTAAACCAACAAACCAAAA 1463

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
mfj00027  1011 CTTCGCATTCAGCTTCTTCTCCAGGGCCAGACCACACCCTCTTCAGCCAC 1060
                    ||   |  |  ||            |       ||| || |||  
pj01649   1464 AAGGCCACAAAATTAATT............AGAGGCTTCTCATCTGCCTT 1501

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
mfj00027  1061 ATTCCAGAACCCTTTCAACCCAGACTTTACTGCCCCACCCTGTCGGAAAG 1110
                 ||| ||    |       |    |    || |      ||  ||||  
pj01649   1502 GGTCCTGAGTGTTCCAGGAGCTCTTTGGTTTGGCTTCTTTTGATGGAAGA 1551

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
mfj00027  1111 CCCTTAACAGTTTCCACACTGGTTTTCCCAGCTTGTTTTTTGTGCCACCC 1160
                 | |     ||  || ||||  |  |    ||  |  |  | ||  |||
pj01649   1552 ATCCT...GCTTCACAGACTGAGTGGCAGGCCTCCTCCTGAGGGCAGCCC 1598

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
mfj00027  1161 CTAAGCCAC......ATTTTCCTCTTGGCTG...CCTAGCTCAGCTCCCT 1201
               ||    |||         || |   ||||||   |||  |   || | ||
pj01649   1599 CTGGAGCACCAGGAAGCGTTGCCGCTGGCTGTGCCCTCCCCTGGCACTCT 1648

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
mfj00027  1202 ATCTGCCCCACAGAGACCCTGTCAGTTTCCCCCTGTCTCATCAGTTCGCC 1251
                 ||||        || |  | |||      |  |||| |   |     |
pj01649   1649 GACTGCATGCTGATGAGCAAGGCAG.....GCAGGTCTGAGAGGCGAAAC 1693

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
mfj00027  1252 TGCTGTCCCAGCCTGGCTCCCGTCCCCTAGTCGCCTCCACTCATTCACTT 1301
                  | |||| ||   |||           || |  ||  ||| |      
pj01649   1694 GAATCTCCCGGCAGTGCTTGGAAGTGTCTGTGGGGTCTCCTCCT...... 1737

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
mfj00027  1302 CTCACTTACTTCCCCGTGAGACCCTTTCTCCTCCCCAGTCTCTTACATTG 1351
                   |  |  |||||  ||    || | ||       |  | | |  || 
pj01649   1738 ....CCCAGATCCCCAAGA...TCTGTGTCACTGGTCGATTTTGAACTTT 1780

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
mfj00027  1352 TCCTGGTCTCTTCCTATTCGATTCCTCCCCCAGTTCCTGGCCGACACTCA 1401
                  |       | || ||| |    ||    | |        | |||  |
pj01649   1781 AGGTACATGTGTTCTTTTCAAAAATTCAGAGAATCGTCATGTGCCACAGA 1830

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
mfj00027  1402 AGCGCCACACCCTTTTCCAGATTTCTCTACATGCTCCTTAATAACTGGCT 1451
               ||| |  |      |||   | ||  | | ||       ||||     | 
pj01649   1831 AGCTCAGCCTGGGCTTCAGCAATTGACAAAATTTGAAGAAATATTAAACA 1880

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
mfj00027  1452 CTAGTACTTTGA........AGTCATTCCCCTCCTGCCTCTTCAGTAGCT 1493
                 | ||     |        |  | |  || |  || |  |  |   |  
pj01649   1881 AAAATAACAAAAAAAGAAACAACCTTGGCCTTAATGTCAATAAAAGGGAG 1930

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
mfj00027  1494 TTGACACATTGGGCGAGCTTTTTAACCTTCCTGGGCCTTCACATTCTTAT 1543
               |||   |  |      |  |||| |       |  | ||   | | |   
pj01649   1931 TTGTGTCTGTTAAGTGGTCTTTTCATAGAATCGTCCATTAGAAATGTGTG 1980

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
mfj00027  1544 CTGTAACTGGGATCAATAATAGTCAACTTAGAACTATCCACACAGGACTG 1593
               |      |  | |   ||  |||   |||  || | |  ||  ||   | 
pj01649   1981 CCTGTGTTTAGCTTCCTATCAGTGGGCTTTAAATTGTATACCGAGTCATA 2030

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
mfj00027  1594 ATTTAAGCTGAGATATTCTGTACAGTTTTGAGGATAGACTAAATGCCAAA 1643
                 |    |   ||||                      ||||||     | 
pj01649   2031 GATACGCCACTGATA......................ACTAAAACTAGAT 2058

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
mfj00027  1644 CATGGCTCTAGCTGATGGAAAGATGGAAAGAGATGACTCGGGATGACTGG 1693
               || ||||   |  || ||  || ||      |   | ||  | || |   
pj01649   2059 CAGGGCTGGTGAAGAAGGTTAGGTGTTTTAGGTACATTCCAGCTGTCATA 2108

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
mfj00027  1694 CCATGCCTGAGATGTAGTGAGAGGTCTTGTTTCCATTTATACTCTCCTAT 1743
                 | |        | | ||||  | ||  |||||  | || |||     |
pj01649   2109 GGAAG..ATCACAGAAATGAGGAGGCTGTTTTCCTCTGATTCTC....CT 2152

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
mfj00027  1744 GTGATGCCCCCTTATTCTTGATTCTGCTTCCTGGATGTCCCTAGCCCTCT 1793
                 |  | || | | | |   || |||||   |        | | |  |  
pj01649   2153 CGGCCGACCACCTGTCC..AATGCTGCTGGTTTCGCAGAGCGACCGGTTG 2200

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
mfj00027  1794 TCCCTGT.TGAGGCAGCTCCTTTCTTCCTTTGTGTTCAGATGTTTCTATT 1842
                   ||| ||||| ||    ||       | | | |    |||||  | |
pj01649   2201 GAGATGTCTGAGGAAGAAAGTTCAAGGTGTAGGGATAGTGTGTTTGGAAT 2250

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
mfj00027  1843 TTTTCTTTTAATTAATTAGTTAATTAATTAATTTACTTATTCCCTTTACA 1892
               ||  ||||  |||  | ||  |   ||             |      |  
pj01649   2251 TTGACTTTCCATTTCTGAG..ACCCAAGGGGGCGTAGATGTAGTGGCAAG 2298

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
mfj00027  1893 TCCTGCTCACTGCCCCCTACAGTCCTTCTCCCCATGCCCCACTTCTTCTC 1942
               |   ||    |   | || |  ||||   || |      |   || ||  
pj01649   2299 TGTGGCGATGTTTACTCTCCCTTCCTGAACCGCTCTGGTCTGCTCCTCAG 2348

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
mfj00027  1943 TAAGTGGGTGGGGTCTCCCCCTGAGTATCTCCCTACCCTGGTACATCAAG 1992
                 || |    ||  |    ||| ||    ||         ||   | |  
pj01649   2349 AGAGGGCAGCGGTGCCAGGCCTCAG...GTCAGGGAGAATGTCTGTGACT 2395

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
mfj00027  1993 TTTCTGCAGGGCTAGTCTAATCCTCTCCCACTCAGGCCAAACAAGTCAAC 2042
               |  ||||| | ||||   | | | || | |                | | 
pj01649   2396 TAGCTGCA.GACTAGGAGACTGCCCTGCTA...............ACTAA 2429

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
mfj00027  2043 CCAGCTAGAAGAACATATTCCACGAACAGCCAACAGCTTTTTGGGGTAGC 2092
                 ||| || ||     |   ||  || |   || |||   |    |||  
pj01649   2430 TTAGCAAGCAGCTTTGACCTCATTAATATATAAAAGCAGCTCTCAGTATA 2479

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
mfj00027  2093 CCCCATTCCAGTTGTTTGGG........ACCCACATGAAGACCAAGCTGC 2134
                 || |  |   ||| || |         ||| || |     ||||   |
pj01649   2480 TTCCGTGTCGTGTGTGTGTGTGGCCAAAGCCCCCAAGGGTGGCAAGTGCC 2529

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
mfj00027  2135 ACATCTGCTGT.....ATATGTGCAGAGAGGTCTAGGTCCAGCCCATGTA 2179
               || |  |||||     |  ||||  |   |   |||     |      | 
pj01649   2530 ACCTTCGCTGTGCTAGAGTTGTGTTGTAGGAATTAGTCAGGGAGTTGTTG 2579

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
mfj00027  2180 TGCTCTTTGGTTTGTGGTTCAGTCTCTGAGAACCCCTAAGGGT..CCAGG 2227
               ||                |   | |  | |||| |  ||  ||  |||| 
pj01649   2580 TGAAAAAAAAAACCCCAGTGCTTGTGAGGGAACTCAAAATAGTTACCAGA 2629

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
mfj00027  2228 TTAGTTGACTCTGTTGATCT.TCCTGTGGAGTTCCTATCTCCTTAGGGGC 2276
                 | |    | ||   || |  | |||  | | |  | | |  |  |   
pj01649   2630 AAAATAATATTTGCCAATATGACGTGTATATTGCTCAGCACACTCTGTAT 2679

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
mfj00027  2277 CTACAATCCTTCTCCCTATACTTCCACAAGACTCCCCAAGCTCCATCCAC 2326
               || |  |||||        |  ||| |  | | ||   |     |  |||
pj01649   2680 CTCCTGTCCTT.......AAAATCCTCTTGTCCCCGGCATTCTGACACAC 2722

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
mfj00027  2327 TGTTTGGCCAT.GGGTGTCTGTATCTGTCTGAGTCAGCTGCTGGGTGGAG 2375
               ||    ||| |  ||||||     | | |  || |     ||   |  | 
pj01649   2723 TGGGCTGCCGTCCGGTGTCAAGCCCCGGCGCAGGCTTGCTCTTCTTTTAC 2772

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
mfj00027  2376 CTTCTCAAAGGTCAGACATTAATGTGTCCCTTATCCTCTGGCACATTCAC 2425
                 |   |  ||| |    | |  || || |   ||||     || |  | 
pj01649   2773 AATGAAAGGGGTGAAGAGTGAGGGTCTCACAGTTCCT....TACCTCAAA 2818

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
mfj00027  2426 GTTCCTTGAAAATGAACGCTTTCAAACTTAGAAACATCCCCCATCTTCCT 2475
               || |||| |       |   ||   |   ||                |||
pj01649   2819 GTCCCTTTAGGTCCTTCTGGTTTGGAGGAAG...........TGGAGCCT 2857

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
mfj00027  2476 CCACGCACACCCTGTTTATACAATTCTCCCTGTGCTGCATGCAGCCTTGG 2525
               ||||| || | || ||  |         ||     | || |||||   | 
pj01649   2858 CCACGAACTCTCTCTTACT.........CCGACCATTCAGGCAGCAAAG. 2897

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
mfj00027  2526 CCTGCTTTCTCACCTCACATCCATCCAGTGCACATCT.....CTGAATGT 2570
                      ||||  || |||||  |   ||   || ||     |||| || 
pj01649   2898 .......TCTCTGCTTACATCATTTTGGTTGTCACCTTGGGGCTGAGTGA 2940

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
mfj00027  2571 TTAGCTTTTGGGCCTTCCTTTATGTTTCTACCAACATCAGCTAGCTGATA 2620
                 ||  ||| |    |   ||  |  | |          ||||  |||  
pj01649   2941 GAAGTCTTTTGTAAATTAATTCGGCGTGT..........GCTACATGAGC 2980

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
mfj00027  2621 GATCCTAGTTGACTTGAACATG..TAGCAGCACCGGGCTTGGGTACTGAG 2668
                ||  |  || ||  ||||| |  || ||| | ||   |||     ||| 
pj01649   2981 CATAATTATTAAC.AGAACAGGAATATCAGAAACGAAGTTG....TTGAT 3025

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
mfj00027  2669 GAAGCAGATGTGTGTGATAATGATGGAGCTGGCCTTGTGCAGCTGTGACT 2718
                | ||  |  || |   |     |  | ||     | |  | ||||||  
pj01649   3026 CAGGCCCA.CTGCGACCTTCCTTTCTATCTCAGGGTTTAAAACTGTGAGG 3074

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
mfj00027  2719 TCTGAG..GTCTTCATTCAGCTCCACAGTCAGTTAGGTGCCCTTTTCCTA 2766
                  |||  || |  |   || |  | | |      ||  | |  |   ||
pj01649   3075 AAGGAGAAGTATGAAGGAAGGTAGAAAATGCTGGTGGGTCTCCGTGTTTA 3124

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
mfj00027  2767 AGTGTGGAAGGAAGGGCTA...CAGAGTTAGTGTCTTCTGCTAACCCTGT 2813
                | ||   ||     |  |      ||  | || ||   |   | |||| 
pj01649   3125 TGAGTCACAGATTTTGAAAGCTATCAGGAAATGACTAGAGTGGATCCTGG 3174

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
mfj00027  2814 GTGTGGGCGCTTCAGTAGGCTCTGCAGGCACTCCTCTCATGCAGCCAGAA 2863
                  ||    |  |  |  ||    |||  | || |  |||  |||   ||
pj01649   3175 CACTGATTCCAACTCTTTGC....CAGCTAATCTTAACATTTAGCAGAAA 3220

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
mfj00027  2864 G.......ACTGGCATAAATAGAGACTCTATTGTTAAGGCAAAAGTCAGA 2906
               |       |     ||    |  |  || |  |     || || ||  | 
pj01649   3221 GCTCTAGCAACATGATCTTAATTGTATCCAGAGGATTTGCCAATGTATGT 3270

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
mfj00027  2907 GCCCTGCCTCAGAATTCCATGGCTTCCTGCATTCTGGTTCCCACTAGGTA 2956
                |  |  ||||  |||   |||| |    ||  |  |||    ||||   
pj01649   3271 TCAGTCTCTCAAGATT...TGGCATTAGTCAGACATGTTGATGCTAG... 3314

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
mfj00027  2957 CCTCTCTCTGGGTTAACTGATATCACAACCAGACTGACCTTCCAGCATTA 3006
               || |  | ||| ||     |||  | || ||                   
pj01649   3315 CCACAATTTGGATTTCTCCATAGAATAATCA................... 3345

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
mfj00027  3007 GTATATTACTTCCTTTCCA..AGGTCTGGGTCAAACAAGGACGAAGCTCC 3054
                | ||||  | |   || |  |  || | ||  |  | | ||   |   |
pj01649   3346 .TTTATTTTTGCAGATCAAATAAATCAGAGTTTACAATGCACAGGGGATC 3394

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
mfj00027  3055 TTTTCCTTGGACAGCCACAGGGAAGTGGGGTTCTCATAATAATGTTTATA 3104
                |||  || |    ||   |  |   |    | |   |   |   |  ||
pj01649   3395 ATTTATTTAGCATTCCCTTGCTAGAAGCCCGTGTGCCAGGCACTGTGCTA 3444

          3651 ----+----*----+----*----+----*----+----*----+----* 3700
mfj00027  3105 CTAGCACTGGAGGATCAAAAGAGAGACAGAAACAAACACCCACAAGC.CA 3153
                 ||   |||    |  ||||| |        || |  | ||||| |  |
pj01649   3445 GAAGTGGTGGGCAGTATAAAGAAATCTGTCTCCACAGCCACACAACCAGA 3494

          3701 ----+----*----+----*----+----*----+----*----+----* 3750
mfj00027  3154 AGATGCATGTGAGTTTCTGATTCTGCCCTGGTACTTGTGTTCACAAATCC 3203
                | ||||  ||| ||  |   | ||                 || ||  |
pj01649   3495 GGGTGCACATGACTTGATCCCTATG.................ACCAAGTC 3527

          3751 ----+----*----+----*----+----*----+----*----+----* 3800
mfj00027  3204 TAGTTCATTTATCTGAAAGGTTGGTCTGTGGGTACCCTGGCATTGGATTC 3253
                ||||  | |  |  |||     || ||     |   |  ||  || |||
pj01649   3528 AAGTTGGTGTTGCCCAAATCGCAGTTTGACATAAGGGTCCCACAGGCTTC 3577

          3801 ----+----*----+----*----+----*----+----*----+----* 3850
mfj00027  3254 CTGCTTCCCCTTTCATCTTCCACTCTGCCACGCCCTGGTGGGTGGAACCT 3303
               |     ||||   |    ||    |  |   | ||   |   |  | |||
pj01649   3578 CCCACCCCCCGCCCCCACTCACTGCCCCAGGGACCAACTTCCT..ACCCT 3625

          3851 ----+----*----+----*----+----*----+----*----+----* 3900
mfj00027  3304 TACGGGTGGAATCTGGCGAGTGGATCCACCCAGCAGGATCTGCCCCTTCT 3353
                ||    ||  |  |                   |||| |||   | | |
pj01649   3626 CACCCAAGGCTTTAG...................AGGACCTGTAGCATGT 3656

          3901 ----+----*----+----*----+----*----+----*----+----* 3950
mfj00027  3354 CACCTTCA..TAGAGATCAAGCCAGTTGGATTCAGAGAGCCAAGGCTCCC 3401
               |   ||||    |  |  |  ||  |  | || | | | |||  |     
pj01649   3657 CTTTTTCAACCTGTCAGTATCCCCTTCTGCTTAACACACCCACTGAGAAA 3706

          3951 ----+----*----+----*----+----*----+----*----+----* 4000
mfj00027  3402 ACACCGCCTTGGGTGATCCTGCTCAGTT...TATGTTTCTGAGCTGGCTG 3448
               || | |  |   ||   | |   |  ||   | |||  ||   |||||  
pj01649   3707 ACCCTGTTTGTAGTTCACTTTGACTCTTGAATGTGTCACTTTACTGGCAA 3756

          4001 ----+----*----+----*----+----*----+----*----+----* 4050
mfj00027  3449 GAGTTGTTCTATTTGTGGAAGCTGGGTCAGACAGCTCGAGAATGAGCCCG 3498
               |||   | || |   |   |       ||         |  |  |  | |
pj01649   3757 GAGACTTCCTTTGATTTCTACTGTTTACA.........AATAAAACTCAG 3797

          4051 ----+----*----+----*----+----*----+----*----+----* 4100
mfj00027  3499 CCCCTCAGATGCGACGACTCACTTCAAATGTTGGTCTGTGCCTTTGTTCC 3548
               ||  ||  || | |   | ||     | ||   |    ||  |||| | |
pj01649   3798 CCAGTCTCATTCTATATCCCAAACGTACTGAATGAAACTGATTTTGGTTC 3847

          4101 ----+----*----+----*----+----*----+----*----+----* 4150
mfj00027  3549 AAATAGCACTCTACCCTGCAACAAAGCCTTACCTGTGGTAGGCATGCATG 3598
                |  |||| | |    |        ||||| |    |||   || || | 
pj01649   3848 CACAAGCAGTGT....TTGGGTGTTGCCTTCCTGAAGGTGACCAAGCTTC 3893

          4151 ----+----*----+----*----+----*----+----*----+----* 4200
mfj00027  3599 C...CCTTGTCCACTTTCCAATTACACAAATACTGGCTGCTTAGACTCGT 3645
               |    || ||||   |  |   |  |||  | |  |  | |     || |
pj01649   3894 CAAAGCTCGTCCCACTGGCCTCTGTACATTTCCCTGTGGTTCTCCGTCCT 3943

          4201 ----+----*----+----*----+----*----+----*----+----* 4250
mfj00027  3646 GTAGGGGACACGAGTCT...CTTGAAGATCGC.....TTTTATCTGCTGT 3687
                    ||  | |   ||     ||||| |  |      |||  ||||   
pj01649   3944 TCCCTGGCGAGGGAGCTGGGACTGAAGCTTTCCCGCTGTTTCCCTGCCTG 3993

          4251 ----+----*----+----*----+----*----+----*----+----* 4300
mfj00027  3688 CAGAATTCTATCAACTTATTATGAACAATCTTTGAACACC..TCGATTCT 3735
               || ||      | |     |  | |    |||    || |  ||  | ||
pj01649   3994 CAAAAGCAGCCCCAAGAGCTGCGCATTGGCTTCCCTCAGCAATCTGTCCT 4043

          4301 ----+----*----+----*----+----*----+----*----+----* 4350
mfj00027  3736 TTTTAAATCACATTTTCTGTAAAGTACATATATTTGACTTTGTGACCATC 3785
                | |      |  ||      |  ||  | | |||| || | ||   |  
pj01649   4044 GTCTGTGCTCCCATTCGGTCCACATAGCTTTCTTTGCCTCTCTG...AGG 4090

          4351 ----+----*----+----*----+----*----+----*----+----* 4400
mfj00027  3786 CATGCCCTTTTGTTGTATTTTGAAATATTAAGAACATGTGCCTTTCTAAA 3835
               ||  |        | || ||   | | |   |     ||    ||  | |
pj01649   4091 CAGACAGGAAGTGTCTAATTACGATTTTGTGGCCTGGGTTTTGTTGCATA 4140

          4401 ----+----*----+----*----+----*----+----*----+----* 4450
mfj00027  3836 AAACAGACATTTCTTTAATGAACAATTTGAATTTATGACAAATTTGTTGC 3885
                 |||||   || | ||   ||||  | |        |||  | | ||| 
pj01649   4141 CCACAGA...TTGTCTATGTAACATGTAG.....CGCACACCTCTCTTGG 4182

          4451 ----+----*----+----*----+----*----+----*----+----* 4500
mfj00027  3886 AAAACTTACTTTGTTGCTGTTGTTCCATAAGAAACACTAATCAATTCCAG 3935
                    || | ||  ||||||      || | ||| | || |||  |  ||
pj01649   4183 TGCTATTTCATTCCTGCTGTAAGAGAATGACAAA.AATATTCATGTATAG 4231

          4501 ----+----*----+----*----+----*----+----*----+----* 4550
mfj00027  3936 GGAAATGGACTTTGGGTGGAAGT.ATCTGTAAAGAAGTAATATGTTCTAT 3984
                 || ||    |   |||   ||  |||||        |  |      | 
pj01649   4232 CCAATTGATTGTGACGTGCTTGTGGTCTGTGCTTGCTCAGAAAAACAAAC 4281

          4551 ----+----*----+----*----+----*----+----*----+----* 4600
mfj00027  3985 AAATTAACATAACATAGTATAGATAAAAAAATGTCTGGGATGTATAGACC 4034
               |||  ||||     |   ||  ||||| |||||     || | | |    
pj01649   4282 AAACAAACAGTTTTTCCAAT.TATAAATAAATGCTAAAGACGAACACC.. 4328

          4601 - 4601
mfj00027  4035 T 4035
                
pj01649   4329 . 4329