Comparison of KIAA cDNA sequences between mouse and human (KIAA1878)
<<Original sequence data>>
mouse mKIAA1878 (mfj00027) length: 4035 bp, CDS: 1 - 936
human KIAA1878 (pj01649) length: 4328 bp, CDS: 24 - 1385
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: - - - -
CDS: 432 - 1422 589 321 35.3
3'UTR: 1423 - 4598 1290 1636 55.9
amino acid
CDS: 432 - 1422 150 168 52.8
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mfj00027 1 .................................................. 1
pj01649 1 AAGATTATAGAGACTTGCTTTAGAACCACAAGAAGAAAGAGGAGGCCGGC 50
N H K K K E E A G
51 ----+----*----+----*----+----*----+----*----+----* 100
mfj00027 1 .................................................. 1
pj01649 51 TTTTCAGCTAGCATCATGGCGTGGCCGTGCATCACGAGGGCCTGCTGCAT 100
F S A S I M A W P C I T R A C C I
101 ----+----*----+----*----+----*----+----*----+----* 150
mfj00027 1 .................................................. 1
pj01649 101 CGCCCGCTTCTGGAACCAGTTGGACAAAGCGGACATCGCTGTGCCGCTGG 150
A R F W N Q L D K A D I A V P L V
151 ----+----*----+----*----+----*----+----*----+----* 200
mfj00027 1 .................................................. 1
pj01649 151 TTTTCACCAAGTACTCGGAGGCCACCGAGCACCCGGGCGCCCCGCCGCAG 200
F T K Y S E A T E H P G A P P Q
201 ----+----*----+----*----+----*----+----*----+----* 250
mfj00027 1 .................................................. 1
pj01649 201 CCACCGCCGCCGCAGCAGCAGGCGCAGCCGGCGCTCGCGCCCCCCTCGGC 250
P P P P Q Q Q A Q P A L A P P S A
251 ----+----*----+----*----+----*----+----*----+----* 300
mfj00027 1 .................................................. 1
pj01649 251 GCGCGCGGTTGCCATAGAGACGCAGCCAGCCCAGGGCGAGTTGGATGCAG 300
R A V A I E T Q P A Q G E L D A V
301 ----+----*----+----*----+----*----+----*----+----* 350
mfj00027 1 .................................................. 1
pj01649 301 TTGCCCGGGCAACGGGGCCAGCGCCTGGGCCTACCGGCGAGCGCGAGCCG 350
A R A T G P A P G P T G E R E P
351 ----+----*----+----*----+----*----+----*----+----* 400
mfj00027 1 .................................................. 1
pj01649 351 GCGGCGGGCCCCGGCCGGAGCGGGCCGGGCCCGGGCCTGGGCTCCGGCTC 400
A A G P G R S G P G P G L G S G S
401 ----+----*----+----*----+----*----+----*----+----* 450
Q D Y R A W K
mfj00027 1 ...............................CAGGACTACCGCGCCTGGA 19
||||| ||||| |||||||
pj01649 401 CACCTCCGGCCCCGCGGACTCGGTGATGCGGCAGGATTACCGAGCCTGGA 450
T S G P A D S V M R Q D Y R A W K
451 ----+----*----+----*----+----*----+----*----+----* 500
V Q R P E P S C R P R S E Y Q P
mfj00027 20 AAGTGCAGCGGCCCGAGCCAAGCTGCCGGCCGCGCAGCGAGTACCAGCCG 69
| ||||||||||||||||| |||||||||||||||||||| ||||||||
pj01649 451 AGGTGCAGCGGCCCGAGCCCAGCTGCCGGCCGCGCAGCGAATACCAGCCC 500
V Q R P E P S C R P R S E Y Q P
501 ----+----*----+----*----+----*----+----*----+----* 550
S D A P F E R E T Q Y Q K D F R A
mfj00027 70 TCCGACGCGCCCTTCGAGCGCGAGACCCAGTACCAGAAGGACTTCCGCGC 119
|||||||| |||||||||||||||||||||||||||||||||||||||||
pj01649 501 TCCGACGCTCCCTTCGAGCGCGAGACCCAGTACCAGAAGGACTTCCGCGC 550
S D A P F E R E T Q Y Q K D F R A
551 ----+----*----+----*----+----*----+----*----+----* 600
W P L P R R G D H P W I P K P V Q
mfj00027 120 CTGGCCGCTGCCCCGGCGCGGGGACCATCCCTGGATCCCCAAGCCGGTGC 169
|||||||||||| || ||||||||||| || |||||||||||||| ||||
pj01649 551 CTGGCCGCTGCCGCGCCGCGGGGACCACCCGTGGATCCCCAAGCCCGTGC 600
W P L P R R G D H P W I P K P V Q
601 ----+----*----+----*----+----*----+----*----+----* 650
I P A T S Q P S Q P V L G V P K
mfj00027 170 AAATCCCTGCGACTTCGCAGCCTTCCCAACCTGTTCTCGGGGTGCCCAAG 219
| ||| ||||| | || ||| | || || ||||||||| |||||||
pj01649 601 AGATCTCTGCGGCCTCCCAGGCGTCGGCGCCCATTCTCGGGGCGCCCAAG 650
I S A A S Q A S A P I L G A P K
651 ----+----*----+----*----+----*----+----*----+----* 700
R R P Q S Q E R G P M Q L S A D A
mfj00027 220 CGTCGGCCTCAGAGCCAAGAGCGCGGGCCCATGCAACTTTCTGCTGATGC 269
|| ||||| |||||||| |||||| |||| |||| | ||||| ||
pj01649 651 CGCCGGCCGCAGAGCCAGGAGCGCTGGCCAGTGCAGGCCGCCGCTGAGGC 700
R R P Q S Q E R W P V Q A A A E A
701 ----+----*----+----*----+----*----+----*----+----* 750
R D P E G - G G A G V L A A G K
mfj00027 270 CCGGGACCCGGAGGGTG...CTGGAGGAGCCGGGGTGCTGGCGGCAGGAA 316
|||||| | ||||| | | || ||||| || | |||||||| ||||
pj01649 701 CCGGGAGCAGGAGGCGGCCCCCGGCGGAGCGGGTGGCCTGGCGGCCGGAA 750
R E Q E A A P G G A G G L A A G K
751 ----+----*----+----*----+----*----+----*----+----* 800
A S G V D Q R D T R R K A G P A
mfj00027 317 AGGCGTCCGGTGTAGACCAGCGCGACACACGTAGGAAGGCAGGGCCAGCA 366
|||||||||| | ||| |||||||||| || |||||||| ||||| ||
pj01649 751 AGGCGTCCGGGGCGGACGAGCGCGACACGCGCAGGAAGGCCGGGCCTGCC 800
A S G A D E R D T R R K A G P A
801 ----+----*----+----*----+----*----+----*----+----* 850
W M V T R N - G H E E K P L P
mfj00027 367 TGGATGGTGACTCGCAACGA......AGGGCACGAAGAGAAGCCTCTGCC 410
||||||||| ||| ||| |||||||| ||| ||| |||||
pj01649 801 TGGATGGTGCGCCGCGCCGAGGGCCTGGGGCACGAGCAGACGCCGCTGCC 850
W M V R R A E G L G H E Q T P L P
851 ----+----*----+----*----+----*----+----*----+----* 900
P A Q S Q T Q E G G P A A G K A S
mfj00027 411 CCCAGCCCAATCCCAGACCCAGGAGGGTGGTCCTGCAGCTGGAAAGGCGT 460
| | ||||| ||||| ||||| || || | ||||| | || |
pj01649 851 CGCGGCCCAGGCCCAGGTCCAGGCCACCGGCCCCGAGGCTGGCAGGGGGC 900
A A Q A Q V Q A T G P E A G R G R
901 ----+----*----+----*----+----*----+----*----+----* 950
G A D -
mfj00027 461 CCGGTGCAGATCA..................................... 473
|| || | |
pj01649 901 GCGCCGCGGCGGACGCCCTCAACCGGCAAATCCGCGAGGAGGTGGCGAGT 950
A A A D A L N R Q I R E E V A S
951 ----+----*----+----*----+----*----+----*----+----* 1000
R D T R R K A G P A W M D S
mfj00027 474 .....GCGTGACACACGCAGGAAGGCAGGGCCAGCATGGATGGTGACTCG 518
| | | | |||||| | | ||||||| | |||
pj01649 951 GCAGTGAGCAGCTCCTACAGGAATGAATTCAGGGCATGGACG..GACATC 998
A V S S S Y R N E F R A W T D I
1001 ----+----*----+----*----+----*----+----*----+----* 1050
Q R R A R R E A C P Q P N P R P
mfj00027 519 CAGCGAAGGGCACGAAGAGAAGCCTCTGCCCCCAGCCCAATCCCAGACCC 568
||| | || || | | || | |||||| ||| ||| |
pj01649 999 AAGCCTGTGAAACCAATAAAGGC..CAAGCCCCAGTACAAGCCCCCAGAT 1046
K P V K P I K A K P Q Y K P P D
1051 ----+----*----+----*----+----*----+----*----+----* 1100
R R V V L Q W K G V R C K R D
mfj00027 569 AGGAGGGTGGTCCTGCAG..CTGGAAAGGCGTCCGGTGCAGATCAGCGTG 616
| | |||| | || | | | | | | || || | | |
pj01649 1047 GATAAGATGGTTCATGAGACCAGCTACAGTGCTCAGTTCA....AAGGAG 1092
D K M V H E T S Y S A Q F K G E
1101 ----+----*----+----*----+----*----+----*----+----* 1150
T R R K A G P A W M V T K G
mfj00027 617 ACACACGCAGGAAGGCTGGACCCGCGTGGATGGTGACTCGCACGGAAGGG 666
| | ||| | | | | | | ||| | | | |
pj01649 1093 AGGCCAGCAAGCCAACAACAGCTGACAATAAGGTCATT.......GATCG 1135
A S K P T T A D N K V I D R
1151 ----+----*----+----*----+----*----+----*----+----* 1200
T R R R R C H L R P R R A A
mfj00027 667 CACGAGGAGACGCCGCTGCCACCCGCCCAGTCTCAGACCCAGGAGGGCGG 716
|| || | |||| || | || | |||| | ||
pj01649 1136 CAGAAGAATACGCAGCCTCTAC.........AGCGAACCCTTCAAGGAAC 1176
R R I R S L Y S E P F K E P
1201 ----+----*----+----*----+----*----+----*----+----* 1250
P Q L E R H L V Q S D T R R K
mfj00027 717 CCCCGCAGCTGGAAAGGCATCTGGTGCAGACGAGCGCGACACGAGGAGGA 766
|||| || |||||| | | || |||| | || | |
pj01649 1177 CCCCAAAGGTGGAAAAACCTAGTGTTCAGA.....GTTCCAAACCAAAAA 1221
P K V E K P S V Q S S K P K K
1251 ----+----*----+----*----+----*----+----*----+----* 1300
A G P A W M V R R S E G H E Q T
mfj00027 767 AGGCGGGGCCGGCCTGGATGGTGCGTCGCTCGGAGGGGCACGAACAGACA 816
|| | || | | | | || || | ||| |
pj01649 1222 AGACCTCAGCGAGCCATAAGCCCACGAGGAAGGCCAAAGACAAGCAGGCG 1271
T S A S H K P T R K A K D K Q A
1301 ----+----*----+----*----+----*----+----*----+----* 1350
P A A H - K A Q G L K G K G R
mfj00027 817 CCCGCTGCCCATGC..CCAAGGCACAGGGCCTGAAGGAGGCAAGGGGCGC 864
| | ||| || ||||| | || || | || ||| | | |
pj01649 1272 GTGTCAGGCCAGGCTGCCAAGAAAAAGAGCGCGGAG..GGCCCGAGTACC 1319
V S G Q A A K K K S A E G P S T
1351 ----+----*----+----*----+----*----+----*----+----* 1400
A V A D A N R Q R E E V A S T
mfj00027 865 GCGGTGGCAGATGCCCTCAACAGGCAAATCCGGGAGGAGGTGGCGAGTAC 914
| | |||| | | || ||||| | | ||| || | ||
pj01649 1320 ACCAAGCCAGACGAC...AAGGAGCAAA...GCAAAGAGATGAACAATAA 1363
T K P D D K E Q S K E M N N K
1401 ----+----*----+----*----+----*----+----*----+----* 1450
K Q L L Q
mfj00027 915 A....GTAAGCAGCTCTTACAGGTGAGACTGGGGCAGCAGGTGATGCTGG 960
| | || | | | ||| | | | ||
pj01649 1364 ACTGGCTGAGGCGAAAGAGTAAATTTCCCTGCACTTTCCTTTTACTCTTC 1413
L A E A K E *
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mfj00027 961 TCACCCTCATCCCCTCGCGAGGACCACCCATTCTACCCCCACACCGAAAG 1010
|| | ||| || | | | | || | || | | |||
pj01649 1414 TCTCTCTCTCCCTCCCCCCAACTTTTTTTTTTTAAACCAACAAACCAAAA 1463
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mfj00027 1011 CTTCGCATTCAGCTTCTTCTCCAGGGCCAGACCACACCCTCTTCAGCCAC 1060
|| | | || | ||| || |||
pj01649 1464 AAGGCCACAAAATTAATT............AGAGGCTTCTCATCTGCCTT 1501
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mfj00027 1061 ATTCCAGAACCCTTTCAACCCAGACTTTACTGCCCCACCCTGTCGGAAAG 1110
||| || | | | || | || ||||
pj01649 1502 GGTCCTGAGTGTTCCAGGAGCTCTTTGGTTTGGCTTCTTTTGATGGAAGA 1551
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mfj00027 1111 CCCTTAACAGTTTCCACACTGGTTTTCCCAGCTTGTTTTTTGTGCCACCC 1160
| | || || |||| | | || | | | || |||
pj01649 1552 ATCCT...GCTTCACAGACTGAGTGGCAGGCCTCCTCCTGAGGGCAGCCC 1598
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mfj00027 1161 CTAAGCCAC......ATTTTCCTCTTGGCTG...CCTAGCTCAGCTCCCT 1201
|| ||| || | |||||| ||| | || | ||
pj01649 1599 CTGGAGCACCAGGAAGCGTTGCCGCTGGCTGTGCCCTCCCCTGGCACTCT 1648
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mfj00027 1202 ATCTGCCCCACAGAGACCCTGTCAGTTTCCCCCTGTCTCATCAGTTCGCC 1251
|||| || | | ||| | |||| | | |
pj01649 1649 GACTGCATGCTGATGAGCAAGGCAG.....GCAGGTCTGAGAGGCGAAAC 1693
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mfj00027 1252 TGCTGTCCCAGCCTGGCTCCCGTCCCCTAGTCGCCTCCACTCATTCACTT 1301
| |||| || ||| || | || ||| |
pj01649 1694 GAATCTCCCGGCAGTGCTTGGAAGTGTCTGTGGGGTCTCCTCCT...... 1737
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mfj00027 1302 CTCACTTACTTCCCCGTGAGACCCTTTCTCCTCCCCAGTCTCTTACATTG 1351
| | ||||| || || | || | | | | ||
pj01649 1738 ....CCCAGATCCCCAAGA...TCTGTGTCACTGGTCGATTTTGAACTTT 1780
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mfj00027 1352 TCCTGGTCTCTTCCTATTCGATTCCTCCCCCAGTTCCTGGCCGACACTCA 1401
| | || ||| | || | | | ||| |
pj01649 1781 AGGTACATGTGTTCTTTTCAAAAATTCAGAGAATCGTCATGTGCCACAGA 1830
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mfj00027 1402 AGCGCCACACCCTTTTCCAGATTTCTCTACATGCTCCTTAATAACTGGCT 1451
||| | | ||| | || | | || |||| |
pj01649 1831 AGCTCAGCCTGGGCTTCAGCAATTGACAAAATTTGAAGAAATATTAAACA 1880
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mfj00027 1452 CTAGTACTTTGA........AGTCATTCCCCTCCTGCCTCTTCAGTAGCT 1493
| || | | | | || | || | | | |
pj01649 1881 AAAATAACAAAAAAAGAAACAACCTTGGCCTTAATGTCAATAAAAGGGAG 1930
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mfj00027 1494 TTGACACATTGGGCGAGCTTTTTAACCTTCCTGGGCCTTCACATTCTTAT 1543
||| | | | |||| | | | || | | |
pj01649 1931 TTGTGTCTGTTAAGTGGTCTTTTCATAGAATCGTCCATTAGAAATGTGTG 1980
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mfj00027 1544 CTGTAACTGGGATCAATAATAGTCAACTTAGAACTATCCACACAGGACTG 1593
| | | | || ||| ||| || | | || || |
pj01649 1981 CCTGTGTTTAGCTTCCTATCAGTGGGCTTTAAATTGTATACCGAGTCATA 2030
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mfj00027 1594 ATTTAAGCTGAGATATTCTGTACAGTTTTGAGGATAGACTAAATGCCAAA 1643
| | |||| |||||| |
pj01649 2031 GATACGCCACTGATA......................ACTAAAACTAGAT 2058
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mfj00027 1644 CATGGCTCTAGCTGATGGAAAGATGGAAAGAGATGACTCGGGATGACTGG 1693
|| |||| | || || || || | | || | || |
pj01649 2059 CAGGGCTGGTGAAGAAGGTTAGGTGTTTTAGGTACATTCCAGCTGTCATA 2108
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mfj00027 1694 CCATGCCTGAGATGTAGTGAGAGGTCTTGTTTCCATTTATACTCTCCTAT 1743
| | | | |||| | || ||||| | || ||| |
pj01649 2109 GGAAG..ATCACAGAAATGAGGAGGCTGTTTTCCTCTGATTCTC....CT 2152
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mfj00027 1744 GTGATGCCCCCTTATTCTTGATTCTGCTTCCTGGATGTCCCTAGCCCTCT 1793
| | || | | | | || ||||| | | | | |
pj01649 2153 CGGCCGACCACCTGTCC..AATGCTGCTGGTTTCGCAGAGCGACCGGTTG 2200
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mfj00027 1794 TCCCTGT.TGAGGCAGCTCCTTTCTTCCTTTGTGTTCAGATGTTTCTATT 1842
||| ||||| || || | | | | ||||| | |
pj01649 2201 GAGATGTCTGAGGAAGAAAGTTCAAGGTGTAGGGATAGTGTGTTTGGAAT 2250
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mfj00027 1843 TTTTCTTTTAATTAATTAGTTAATTAATTAATTTACTTATTCCCTTTACA 1892
|| |||| ||| | || | || | |
pj01649 2251 TTGACTTTCCATTTCTGAG..ACCCAAGGGGGCGTAGATGTAGTGGCAAG 2298
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mfj00027 1893 TCCTGCTCACTGCCCCCTACAGTCCTTCTCCCCATGCCCCACTTCTTCTC 1942
| || | | || | |||| || | | || ||
pj01649 2299 TGTGGCGATGTTTACTCTCCCTTCCTGAACCGCTCTGGTCTGCTCCTCAG 2348
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mfj00027 1943 TAAGTGGGTGGGGTCTCCCCCTGAGTATCTCCCTACCCTGGTACATCAAG 1992
|| | || | ||| || || || | |
pj01649 2349 AGAGGGCAGCGGTGCCAGGCCTCAG...GTCAGGGAGAATGTCTGTGACT 2395
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mfj00027 1993 TTTCTGCAGGGCTAGTCTAATCCTCTCCCACTCAGGCCAAACAAGTCAAC 2042
| ||||| | |||| | | | || | | | |
pj01649 2396 TAGCTGCA.GACTAGGAGACTGCCCTGCTA...............ACTAA 2429
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mfj00027 2043 CCAGCTAGAAGAACATATTCCACGAACAGCCAACAGCTTTTTGGGGTAGC 2092
||| || || | || || | || ||| | |||
pj01649 2430 TTAGCAAGCAGCTTTGACCTCATTAATATATAAAAGCAGCTCTCAGTATA 2479
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mfj00027 2093 CCCCATTCCAGTTGTTTGGG........ACCCACATGAAGACCAAGCTGC 2134
|| | | ||| || | ||| || | |||| |
pj01649 2480 TTCCGTGTCGTGTGTGTGTGTGGCCAAAGCCCCCAAGGGTGGCAAGTGCC 2529
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mfj00027 2135 ACATCTGCTGT.....ATATGTGCAGAGAGGTCTAGGTCCAGCCCATGTA 2179
|| | ||||| | |||| | | ||| | |
pj01649 2530 ACCTTCGCTGTGCTAGAGTTGTGTTGTAGGAATTAGTCAGGGAGTTGTTG 2579
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mfj00027 2180 TGCTCTTTGGTTTGTGGTTCAGTCTCTGAGAACCCCTAAGGGT..CCAGG 2227
|| | | | | |||| | || || ||||
pj01649 2580 TGAAAAAAAAAACCCCAGTGCTTGTGAGGGAACTCAAAATAGTTACCAGA 2629
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mfj00027 2228 TTAGTTGACTCTGTTGATCT.TCCTGTGGAGTTCCTATCTCCTTAGGGGC 2276
| | | || || | | ||| | | | | | | | |
pj01649 2630 AAAATAATATTTGCCAATATGACGTGTATATTGCTCAGCACACTCTGTAT 2679
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mfj00027 2277 CTACAATCCTTCTCCCTATACTTCCACAAGACTCCCCAAGCTCCATCCAC 2326
|| | ||||| | ||| | | | || | | |||
pj01649 2680 CTCCTGTCCTT.......AAAATCCTCTTGTCCCCGGCATTCTGACACAC 2722
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mfj00027 2327 TGTTTGGCCAT.GGGTGTCTGTATCTGTCTGAGTCAGCTGCTGGGTGGAG 2375
|| ||| | |||||| | | | || | || | |
pj01649 2723 TGGGCTGCCGTCCGGTGTCAAGCCCCGGCGCAGGCTTGCTCTTCTTTTAC 2772
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mfj00027 2376 CTTCTCAAAGGTCAGACATTAATGTGTCCCTTATCCTCTGGCACATTCAC 2425
| | ||| | | | || || | |||| || | |
pj01649 2773 AATGAAAGGGGTGAAGAGTGAGGGTCTCACAGTTCCT....TACCTCAAA 2818
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mfj00027 2426 GTTCCTTGAAAATGAACGCTTTCAAACTTAGAAACATCCCCCATCTTCCT 2475
|| |||| | | || | || |||
pj01649 2819 GTCCCTTTAGGTCCTTCTGGTTTGGAGGAAG...........TGGAGCCT 2857
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mfj00027 2476 CCACGCACACCCTGTTTATACAATTCTCCCTGTGCTGCATGCAGCCTTGG 2525
||||| || | || || | || | || ||||| |
pj01649 2858 CCACGAACTCTCTCTTACT.........CCGACCATTCAGGCAGCAAAG. 2897
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mfj00027 2526 CCTGCTTTCTCACCTCACATCCATCCAGTGCACATCT.....CTGAATGT 2570
|||| || ||||| | || || || |||| ||
pj01649 2898 .......TCTCTGCTTACATCATTTTGGTTGTCACCTTGGGGCTGAGTGA 2940
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mfj00027 2571 TTAGCTTTTGGGCCTTCCTTTATGTTTCTACCAACATCAGCTAGCTGATA 2620
|| ||| | | || | | | |||| |||
pj01649 2941 GAAGTCTTTTGTAAATTAATTCGGCGTGT..........GCTACATGAGC 2980
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mfj00027 2621 GATCCTAGTTGACTTGAACATG..TAGCAGCACCGGGCTTGGGTACTGAG 2668
|| | || || ||||| | || ||| | || ||| |||
pj01649 2981 CATAATTATTAAC.AGAACAGGAATATCAGAAACGAAGTTG....TTGAT 3025
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mfj00027 2669 GAAGCAGATGTGTGTGATAATGATGGAGCTGGCCTTGTGCAGCTGTGACT 2718
| || | || | | | | || | | | ||||||
pj01649 3026 CAGGCCCA.CTGCGACCTTCCTTTCTATCTCAGGGTTTAAAACTGTGAGG 3074
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mfj00027 2719 TCTGAG..GTCTTCATTCAGCTCCACAGTCAGTTAGGTGCCCTTTTCCTA 2766
||| || | | || | | | | || | | | ||
pj01649 3075 AAGGAGAAGTATGAAGGAAGGTAGAAAATGCTGGTGGGTCTCCGTGTTTA 3124
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mfj00027 2767 AGTGTGGAAGGAAGGGCTA...CAGAGTTAGTGTCTTCTGCTAACCCTGT 2813
| || || | | || | || || | | ||||
pj01649 3125 TGAGTCACAGATTTTGAAAGCTATCAGGAAATGACTAGAGTGGATCCTGG 3174
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mfj00027 2814 GTGTGGGCGCTTCAGTAGGCTCTGCAGGCACTCCTCTCATGCAGCCAGAA 2863
|| | | | || ||| | || | ||| ||| ||
pj01649 3175 CACTGATTCCAACTCTTTGC....CAGCTAATCTTAACATTTAGCAGAAA 3220
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mfj00027 2864 G.......ACTGGCATAAATAGAGACTCTATTGTTAAGGCAAAAGTCAGA 2906
| | || | | || | | || || || |
pj01649 3221 GCTCTAGCAACATGATCTTAATTGTATCCAGAGGATTTGCCAATGTATGT 3270
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mfj00027 2907 GCCCTGCCTCAGAATTCCATGGCTTCCTGCATTCTGGTTCCCACTAGGTA 2956
| | |||| ||| |||| | || | ||| ||||
pj01649 3271 TCAGTCTCTCAAGATT...TGGCATTAGTCAGACATGTTGATGCTAG... 3314
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mfj00027 2957 CCTCTCTCTGGGTTAACTGATATCACAACCAGACTGACCTTCCAGCATTA 3006
|| | | ||| || ||| | || ||
pj01649 3315 CCACAATTTGGATTTCTCCATAGAATAATCA................... 3345
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mfj00027 3007 GTATATTACTTCCTTTCCA..AGGTCTGGGTCAAACAAGGACGAAGCTCC 3054
| |||| | | || | | || | || | | | || | |
pj01649 3346 .TTTATTTTTGCAGATCAAATAAATCAGAGTTTACAATGCACAGGGGATC 3394
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mfj00027 3055 TTTTCCTTGGACAGCCACAGGGAAGTGGGGTTCTCATAATAATGTTTATA 3104
||| || | || | | | | | | | | ||
pj01649 3395 ATTTATTTAGCATTCCCTTGCTAGAAGCCCGTGTGCCAGGCACTGTGCTA 3444
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mfj00027 3105 CTAGCACTGGAGGATCAAAAGAGAGACAGAAACAAACACCCACAAGC.CA 3153
|| ||| | ||||| | || | | ||||| | |
pj01649 3445 GAAGTGGTGGGCAGTATAAAGAAATCTGTCTCCACAGCCACACAACCAGA 3494
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mfj00027 3154 AGATGCATGTGAGTTTCTGATTCTGCCCTGGTACTTGTGTTCACAAATCC 3203
| |||| ||| || | | || || || |
pj01649 3495 GGGTGCACATGACTTGATCCCTATG.................ACCAAGTC 3527
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mfj00027 3204 TAGTTCATTTATCTGAAAGGTTGGTCTGTGGGTACCCTGGCATTGGATTC 3253
|||| | | | ||| || || | | || || |||
pj01649 3528 AAGTTGGTGTTGCCCAAATCGCAGTTTGACATAAGGGTCCCACAGGCTTC 3577
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mfj00027 3254 CTGCTTCCCCTTTCATCTTCCACTCTGCCACGCCCTGGTGGGTGGAACCT 3303
| |||| | || | | | || | | | |||
pj01649 3578 CCCACCCCCCGCCCCCACTCACTGCCCCAGGGACCAACTTCCT..ACCCT 3625
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mfj00027 3304 TACGGGTGGAATCTGGCGAGTGGATCCACCCAGCAGGATCTGCCCCTTCT 3353
|| || | | |||| ||| | | |
pj01649 3626 CACCCAAGGCTTTAG...................AGGACCTGTAGCATGT 3656
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mfj00027 3354 CACCTTCA..TAGAGATCAAGCCAGTTGGATTCAGAGAGCCAAGGCTCCC 3401
| |||| | | | || | | || | | | ||| |
pj01649 3657 CTTTTTCAACCTGTCAGTATCCCCTTCTGCTTAACACACCCACTGAGAAA 3706
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mfj00027 3402 ACACCGCCTTGGGTGATCCTGCTCAGTT...TATGTTTCTGAGCTGGCTG 3448
|| | | | || | | | || | ||| || |||||
pj01649 3707 ACCCTGTTTGTAGTTCACTTTGACTCTTGAATGTGTCACTTTACTGGCAA 3756
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mfj00027 3449 GAGTTGTTCTATTTGTGGAAGCTGGGTCAGACAGCTCGAGAATGAGCCCG 3498
||| | || | | | || | | | | |
pj01649 3757 GAGACTTCCTTTGATTTCTACTGTTTACA.........AATAAAACTCAG 3797
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mfj00027 3499 CCCCTCAGATGCGACGACTCACTTCAAATGTTGGTCTGTGCCTTTGTTCC 3548
|| || || | | | || | || | || |||| | |
pj01649 3798 CCAGTCTCATTCTATATCCCAAACGTACTGAATGAAACTGATTTTGGTTC 3847
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mfj00027 3549 AAATAGCACTCTACCCTGCAACAAAGCCTTACCTGTGGTAGGCATGCATG 3598
| |||| | | | ||||| | ||| || || |
pj01649 3848 CACAAGCAGTGT....TTGGGTGTTGCCTTCCTGAAGGTGACCAAGCTTC 3893
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mfj00027 3599 C...CCTTGTCCACTTTCCAATTACACAAATACTGGCTGCTTAGACTCGT 3645
| || |||| | | | ||| | | | | | || |
pj01649 3894 CAAAGCTCGTCCCACTGGCCTCTGTACATTTCCCTGTGGTTCTCCGTCCT 3943
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mfj00027 3646 GTAGGGGACACGAGTCT...CTTGAAGATCGC.....TTTTATCTGCTGT 3687
|| | | || ||||| | | ||| ||||
pj01649 3944 TCCCTGGCGAGGGAGCTGGGACTGAAGCTTTCCCGCTGTTTCCCTGCCTG 3993
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mfj00027 3688 CAGAATTCTATCAACTTATTATGAACAATCTTTGAACACC..TCGATTCT 3735
|| || | | | | | ||| || | || | ||
pj01649 3994 CAAAAGCAGCCCCAAGAGCTGCGCATTGGCTTCCCTCAGCAATCTGTCCT 4043
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mfj00027 3736 TTTTAAATCACATTTTCTGTAAAGTACATATATTTGACTTTGTGACCATC 3785
| | | || | || | | |||| || | || |
pj01649 4044 GTCTGTGCTCCCATTCGGTCCACATAGCTTTCTTTGCCTCTCTG...AGG 4090
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mfj00027 3786 CATGCCCTTTTGTTGTATTTTGAAATATTAAGAACATGTGCCTTTCTAAA 3835
|| | | || || | | | | || || | |
pj01649 4091 CAGACAGGAAGTGTCTAATTACGATTTTGTGGCCTGGGTTTTGTTGCATA 4140
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mfj00027 3836 AAACAGACATTTCTTTAATGAACAATTTGAATTTATGACAAATTTGTTGC 3885
||||| || | || |||| | | ||| | | |||
pj01649 4141 CCACAGA...TTGTCTATGTAACATGTAG.....CGCACACCTCTCTTGG 4182
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mfj00027 3886 AAAACTTACTTTGTTGCTGTTGTTCCATAAGAAACACTAATCAATTCCAG 3935
|| | || |||||| || | ||| | || ||| | ||
pj01649 4183 TGCTATTTCATTCCTGCTGTAAGAGAATGACAAA.AATATTCATGTATAG 4231
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mfj00027 3936 GGAAATGGACTTTGGGTGGAAGT.ATCTGTAAAGAAGTAATATGTTCTAT 3984
|| || | ||| || ||||| | | |
pj01649 4232 CCAATTGATTGTGACGTGCTTGTGGTCTGTGCTTGCTCAGAAAAACAAAC 4281
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mfj00027 3985 AAATTAACATAACATAGTATAGATAAAAAAATGTCTGGGATGTATAGACC 4034
||| |||| | || ||||| ||||| || | | |
pj01649 4282 AAACAAACAGTTTTTCCAAT.TATAAATAAATGCTAAAGACGAACACC.. 4328
4601 - 4601
mfj00027 4035 T 4035
pj01649 4329 . 4329