FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1378.ptfa, 105 aa vs ./tmplib.26680 library 1768912 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.0419+/-0.00349; mu= 10.2278+/- 0.233 mean_var=62.4615+/-14.033, 0's: 0 Z-trim: 18 B-trim: 0 in 0/36 Lambda= 0.1623 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4210 ( 647 res) mfj22326 ( 647) 307 80 1e-16 mKIAA1490 ( 758 res) mbp00060 ( 758) 295 78 8e-16 mKIAA4221 ( 649 res) mph01865 ( 649) 287 76 2.7e-15 mKIAA0132 ( 637 res) mfk00029 ( 637) 245 66 2.4e-12 mKIAA0795 ( 588 res) mfj41092 ( 588) 237 64 8.3e-12 mKIAA4249 ( 609 res) mfj01240 ( 609) 236 64 1e-11 mKIAA0850 ( 644 res) mph01355 ( 644) 232 63 2e-11 mKIAA1354 ( 679 res) mbh01247 ( 679) 184 51 5e-08 mKIAA1309 ( 653 res) mbh03705 ( 653) 177 50 1.5e-07 mFLJ00127 ( 641 res) msk07274 ( 641) 162 46 1.7e-06 mKIAA1384 ( 534 res) mfj40056 ( 534) 156 45 4e-06 mKIAA4181 ( 591 res) mfj29222 ( 591) 147 43 1.8e-05 mKIAA0469 ( 604 res) mpg00435 ( 604) 144 42 3e-05 mKIAA1900 ( 546 res) mbg06467 ( 546) 141 41 4.6e-05 mKIAA0711 ( 634 res) mpf00289 ( 634) 141 41 5.1e-05 mKIAA1921 ( 1004 res) mbg02133 (1004) 142 42 5.9e-05 mKIAA1340 ( 282 res) mpm09346 ( 282) 124 37 0.00047 mKIAA1842 ( 263 res) mbh00533 ( 263) 114 35 0.0023 >>mKIAA4210 ( 647 res) mfj22326 (647 aa) initn: 533 init1: 307 opt: 307 Z-score: 392.4 bits: 80.2 E(): 1e-16 Smith-Waterman score: 307; 51.807% identity (51.807% ungapped) in 83 aa overlap (1-83:554-636) 10 20 30 mKIAA1 DDNSPLSSVERYDPRSNKWDYVAALTTPRG ::.. :::.:::.::.:.:. :.:.:. :. mKIAA4 RWHTIAPMGTRRKHLGCAVYQDMIYAVGGRDDTTELSSAERYNPRTNQWSPVVAMTSRRS 530 540 550 560 570 580 40 50 60 70 80 90 mKIAA1 GVGIATVMGKIFAVGGHNGNAYLNTVEAFDPVLNKWELVGPVSHCRAGAGVAVCDCLTSQ :::.:.: :...:::: .:..::.:.:.::: : :.: : ... : :.::.: mKIAA4 GVGLAVVNGQLMAVGGFDGTTYLKTIEVFDPDANTWRLYGGMNYRRLGGGVGVIKMTHCE 590 600 610 620 630 640 100 mKIAA1 IRDVGHGSTNVVDCM mKIAA4 SHIW >>mKIAA1490 ( 758 res) mbp00060 (758 aa) initn: 482 init1: 288 opt: 295 Z-score: 376.4 bits: 77.5 E(): 8e-16 Smith-Waterman score: 295; 39.423% identity (40.196% ungapped) in 104 aa overlap (1-104:572-673) 10 20 30 mKIAA1 DDNSPLSSVERYDPRSNKWDYVAALTTPRG : : :..:::.::.:..: :::... :. mKIAA1 TWTVLPPMSTHRHGLGVTVLEGPIYAVGGHDGWSYLNTVERWDPQSQQWTYVASMSIARS 550 560 570 580 590 600 40 50 60 70 80 90 mKIAA1 GVGIATVMGKIFAVGGHNGNAYLNTVEAFDPVLNKWELVGPVSHCRAGAGVAVCDCLTSQ ::.:.. ::...:::..:.. :...: .:: ::: . .:. . :.:.:::.:: . mKIAA1 TVGVAALNGKLYSVGGRDGSSCLSSMEYYDPHTNKWSMCAPMCKRRGGVGVATCDGFLYA 610 620 630 640 650 660 100 mKIAA1 IRDVGHGSTNVVDCM . :: . : mKIAA1 VG--GHDAPASNHCSRLLDYVERYDPKTDTWTMVAPLSMPRDAVGVCLLGDRLYAVGGYD 670 680 690 700 710 >>mKIAA4221 ( 649 res) mph01865 (649 aa) initn: 281 init1: 281 opt: 287 Z-score: 367.1 bits: 75.6 E(): 2.7e-15 Smith-Waterman score: 287; 40.367% identity (41.905% ungapped) in 109 aa overlap (1-105:464-572) 10 20 30 mKIAA1 DDNSPLSSVERYDPRSNKWDYVAALTTPRG : : :..:::.::.. .:..::...:::. mKIAA4 TWSVMPPMSTHRHGLGVAVLEGPMYAVGGHDGWSYLNTVERWDPQARQWNFVATMSTPRS 440 450 460 470 480 490 40 50 60 70 80 90 mKIAA1 GVGIATVMGKIFAVGGHNGNAYLNTVEAFDPVLNKWELVGPVSHCRAGAGVAVCDCLTSQ ::.:.. ::..::::..:.. :..:: ::: ::: : . .:. :.:.::.. . : mKIAA4 TVGVAVLSGKLYAVGGRDGSSCLKSVECFDPHTNKWTLCAQMSKRRGGVGVTTWNGLLYA 500 510 520 530 540 550 100 mKIAA1 IRDVGHGSTNVV----DCM : ..:.. ::. mKIAA4 IGGHDAPTSNLTSRLSDCVERYDPKTDVWTAVASMSVSRDAVGVCLLGDKLYAVGGYDGQ 560 570 580 590 600 610 >>mKIAA0132 ( 637 res) mfk00029 (637 aa) initn: 348 init1: 239 opt: 245 Z-score: 314.0 bits: 65.7 E(): 2.4e-12 Smith-Waterman score: 245; 38.776% identity (39.175% ungapped) in 98 aa overlap (7-103:451-548) 10 20 30 mKIAA1 DDNSPLSSVERYDPRSNKWDYVAALTTPRGGVGIAT ::::::.:. ..: :: . : : :::.:. mKIAA0 SMSVPRNRIGVGVIDGHIYAVGGSHGCIHHSSVERYEPERDEWHLVAPMLTRRIGVGVAV 430 440 450 460 470 480 40 50 60 70 80 90 mKIAA1 VMGKIFAVGGHNGNAYLNTVEAFDPVLNKWELVGPVSHCRAGAGVAVC-DCLTSQIRDVG . ..:::: .:. ::..: . : :.:... :.. :.:::: : .:. . : mKIAA0 LNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITPMNTIRSGAGVCVLHNCIYAAGGYDG 490 500 510 520 530 540 100 mKIAA1 HGSTNVVDCM . . : :. mKIAA0 QDQLNSVERYDVETETWTFVAPMRHHRSALGITVHQGKIYVLGGYDGHTFLDSVECYDPD 550 560 570 580 590 600 >>mKIAA0795 ( 588 res) mfj41092 (588 aa) initn: 547 init1: 236 opt: 237 Z-score: 304.3 bits: 63.8 E(): 8.3e-12 Smith-Waterman score: 237; 38.554% identity (38.554% ungapped) in 83 aa overlap (1-83:359-441) 10 20 30 mKIAA1 DDNSPLSSVERYDPRSNKWDYVAALTTPRG : . ::.:: :.:... : :..... :. mKIAA0 RWEKCHPMTTARSRVGVAVVNGLLYAIGGYDGQLRLSTVEAYNPETDTWTRVGSMNSKRS 330 340 350 360 370 380 40 50 60 70 80 90 mKIAA1 GVGIATVMGKIFAVGGHNGNAYLNTVEAFDPVLNKWELVGPVSHCRAGAGVAVCDCLTSQ ..: ... :.:.. ::..::. ::.::...: .:: .: :.: :..:::.: mKIAA0 AMGTVVLDGQIYVCGGYDGNSSLNSVETYSPETDKWTVVTPMSSNRSAAGVTVFEGRIYV 390 400 410 420 430 440 100 mKIAA1 IRDVGHGSTNVVDCM mKIAA0 SGGHDGLQIFSSVEHYNHHTATWHPAASMLNKRCRHGAASLGSKMFVCGGYDGSGFLSIA 450 460 470 480 490 500 >>mKIAA4249 ( 609 res) mfj01240 (609 aa) initn: 516 init1: 236 opt: 236 Z-score: 302.9 bits: 63.6 E(): 1e-11 Smith-Waterman score: 236; 39.024% identity (39.024% ungapped) in 82 aa overlap (6-87:469-550) 10 20 30 mKIAA1 DDNSPLSSVERYDPRSNKWDYVAALTTPRGGVGIA ::.:: :. .:.: :.: ..: :.:.:.. mKIAA4 MNTRRSSVGVGVVGGLLYAVGGYDGASRQCLSTVECYNATANEWTYIAEMSTRRSGAGVG 440 450 460 470 480 490 40 50 60 70 80 90 mKIAA1 TVMGKIFAVGGHNGNAYLNTVEAFDPVLNKWELVGPVSHCRAGAGVAVCDCLTSQIRDVG .. . ..:::::.: ..::..::. : :. :. .. :: .::: . . : mKIAA4 VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDD 500 510 520 530 540 550 100 mKIAA1 HGSTNVVDCM mKIAA4 GSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGKATSSCLLAYSETDISFL 560 570 580 590 600 >>mKIAA0850 ( 644 res) mph01355 (644 aa) initn: 398 init1: 224 opt: 232 Z-score: 297.5 bits: 62.7 E(): 2e-11 Smith-Waterman score: 232; 38.158% identity (38.158% ungapped) in 76 aa overlap (6-81:528-603) 10 20 30 mKIAA1 DDNSPLSSVERYDPRSNKWDYVAALTTPRGGVGIA :..::::.:..: : .: ... : :.:.: mKIAA0 APLNIRRHQSAVCELGGYLYIIGGAESWNCLNTVERYNPENNTWTLIAPMNVARRGAGVA 500 510 520 530 540 550 40 50 60 70 80 90 mKIAA1 TVMGKIFAVGGHNGNAYLNTVEAFDPVLNKWELVGPVSHCRAGAGVAVCDCLTSQIRDVG .. ::.:. :: .:. .. :: .::. :.:...: .. :..::.. mKIAA0 VLDGKLFVGGGFDGSHAISCVEMYDPTRNEWKMMGNMTSPRSNAGITTVGNTIYAVGGFD 560 570 580 590 600 610 100 mKIAA1 HGSTNVVDCM mKIAA0 GNEFLNTVEVYNPQSNEWSPYTKIFQF 620 630 640 >>mKIAA1354 ( 679 res) mbh01247 (679 aa) initn: 292 init1: 164 opt: 184 Z-score: 236.5 bits: 51.5 E(): 5e-08 Smith-Waterman score: 184; 37.179% identity (37.662% ungapped) in 78 aa overlap (4-80:426-503) 10 20 30 mKIAA1 DDNSPLSSVERYDPRSNKWDYVAALTTPRGGVG . ...: :.::: ::: ::.:. : mKIAA1 DAPRYQHGIAVIGNFLYVVGGQSNYDTKGKTAVDTVFRFDPRYNKWMQVASLNEKRTFFH 400 410 420 430 440 450 40 50 60 70 80 90 mKIAA1 IATVMGKIFAVGGHNGNAYLNTVEAFDPVLNKWELVGPVSHCRAG-AGVAVCDCLTSQIR .... :...::::... . : ::: ..: .:.: :. .:. . : ::. mKIAA1 LSALKGHLYAVGGRSAAGELATVECYNPRMNEWSYVAKMSEPHYGHAGTVYGGLMYISGG 460 470 480 490 500 510 100 mKIAA1 DVGHGSTNVVDCM mKIAA1 ITHDTFQNELMCFDPDTDKWTQKAPMTTVRGLHCMCTVGDKLYVIGGNHFRGTSDYDDVL 520 530 540 550 560 570 >>mKIAA1309 ( 653 res) mbh03705 (653 aa) initn: 286 init1: 157 opt: 177 Z-score: 227.9 bits: 49.8 E(): 1.5e-07 Smith-Waterman score: 177; 37.179% identity (37.662% ungapped) in 78 aa overlap (4-80:404-481) 10 20 30 mKIAA1 DDNSPLSSVERYDPRSNKWDYVAALTTPRGGVG . ...: :.::: ::: ::.:. : mKIAA1 DAPRYQHGIAVIGNFLYVVGGQSNYDTKGKTAVDTVFRFDPRYNKWIQVASLNEKRTFFH 380 390 400 410 420 430 40 50 60 70 80 90 mKIAA1 IATVMGKIFAVGGHNGNAYLNTVEAFDPVLNKWELVGPVSHCRAG-AGVAVCDCLTSQIR .... : ..::::.:. . : ::: ..: :.: :. ... . : ::. mKIAA1 LSALKGFLYAVGGRNAAGELPTVECYNPRTNEWTYVAKMNEPHYGHAGTVYGGVMYISGG 440 450 460 470 480 490 100 mKIAA1 DVGHGSTNVVDCM mKIAA1 ITHDTFQKELMCFDPDTDKWTQKAPMTTVRGLHCMCTVGDRLYVIGGNHFRGTSDYDDVL 500 510 520 530 540 550 >>mFLJ00127 ( 641 res) msk07274 (641 aa) initn: 264 init1: 156 opt: 162 Z-score: 209.0 bits: 46.3 E(): 1.7e-06 Smith-Waterman score: 162; 33.333% identity (33.735% ungapped) in 84 aa overlap (3-85:387-470) 10 20 30 mKIAA1 DDNSPLSSVERYDPRSNKWDYVAALTTPRGGV :. . . ::::: ..: ::... : mFLJ00 LPARRSHHCVAVLGGFIFIAGGSFSRDNGGNAASNLLYRYDPRRKQWIKVASMNQRRVDF 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA1 GIATVMGKIFAVGGHNGNAYLNTVEAFDPVLNKWELVGPVSHCRAG-AGVAVCDCLTSQI .:.. . ::::.: :. :..::...: :.: :. . . : ::. : mFLJ00 YLASIEDMLVAVGGRNENGALSSVETYSPKTNSWTYVAGLPRFTYGHAGTIYKDFVYISG 420 430 440 450 460 470 100 mKIAA1 RDVGHGSTNVVDCM mFLJ00 GHDYQIGPYRKNLLCYDHRTDVWEERRPMTTARGWHSMCSLGDSIYSIGGSDDHMESMER 480 490 500 510 520 530 105 residues in 1 query sequences 1768912 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:42:49 2006 done: Mon Mar 27 10:42:49 2006 Scan time: 0.280 Display time: 0.030 Function used was FASTA [version 3.4t11 Apr 17, 2002]