# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mek00888.fasta.nr -Q ../query/mKIAA0526.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0526, 178 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919473 sequences Expectation_n fit: rho(ln(x))= 4.9558+/-0.000177; mu= 7.9403+/- 0.010 mean_var=61.3939+/-12.550, 0's: 40 Z-trim: 52 B-trim: 5692 in 2/66 Lambda= 0.163686 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|74227484|dbj|BAE21805.1| unnamed protein produc ( 266) 1171 284.5 8.6e-75 gi|26348405|dbj|BAC37842.1| unnamed protein produc ( 278) 1171 284.5 8.9e-75 gi|6685600|sp|P97363.2|SPTC2_MOUSE RecName: Full=S ( 560) 1171 284.7 1.6e-74 gi|6685580|sp|O15270.1|SPTC2_HUMAN RecName: Full=S ( 562) 1160 282.1 9.6e-74 gi|78070460|gb|AAI07663.1| Protein-O-mannosyltrans ( 560) 1158 281.6 1.3e-73 gi|149025279|gb|EDL81646.1| protein-O-mannosyltran ( 562) 1158 281.6 1.3e-73 gi|114654128|ref|XP_510095.2| PREDICTED: serine pa ( 893) 1160 282.2 1.4e-73 gi|194038623|ref|XP_001926625.1| PREDICTED: serine ( 586) 1157 281.4 1.6e-73 gi|149737556|ref|XP_001492046.1| PREDICTED: serine ( 528) 1154 280.7 2.4e-73 gi|6685594|sp|O54694.1|SPTC2_CRIGR RecName: Full=S ( 560) 1148 279.3 6.8e-73 gi|73964352|ref|XP_537524.2| PREDICTED: similar to ( 691) 1142 277.9 2.2e-72 gi|126282545|ref|XP_001373999.1| PREDICTED: simila ( 625) 1139 277.2 3.2e-72 gi|53133736|emb|CAG32197.1| hypothetical protein [ ( 560) 1136 276.4 4.9e-72 gi|148745525|gb|AAI42540.1| SPTLC2 protein [Bos ta ( 562) 1105 269.1 7.8e-70 gi|224051562|ref|XP_002200055.1| PREDICTED: serine ( 520) 1088 265.1 1.2e-68 gi|49115335|gb|AAH73312.1| MGC80715 protein [Xenop ( 555) 1022 249.5 6.1e-64 gi|63101255|gb|AAH95355.1| Serine palmitoyltransfe ( 534) 1009 246.4 5e-63 gi|47214597|emb|CAF94268.1| unnamed protein produc ( 511) 955 233.7 3.3e-59 gi|166796256|gb|AAI59261.1| Zgc:175221 protein [Da ( 558) 911 223.3 4.8e-56 gi|109084458|ref|XP_001096042.1| PREDICTED: simila ( 780) 907 222.4 1.2e-55 gi|47222669|emb|CAG00103.1| unnamed protein produc ( 491) 880 215.9 6.9e-54 gi|149640840|ref|XP_001514082.1| PREDICTED: simila ( 550) 854 209.8 5.3e-52 gi|73991509|ref|XP_542889.2| PREDICTED: similar to ( 552) 845 207.7 2.3e-51 gi|126303698|ref|XP_001374370.1| PREDICTED: simila ( 552) 828 203.7 3.8e-50 gi|109092922|ref|XP_001082737.1| PREDICTED: simila ( 552) 826 203.2 5.2e-50 gi|109092924|ref|XP_001082594.1| PREDICTED: simila ( 554) 826 203.2 5.2e-50 gi|118087705|ref|XP_001231526.1| PREDICTED: hypoth ( 517) 824 202.7 6.9e-50 gi|149733067|ref|XP_001492553.1| PREDICTED: serine ( 551) 824 202.7 7.2e-50 gi|224047038|ref|XP_002197576.1| PREDICTED: hypoth ( 525) 819 201.5 1.6e-49 gi|114681047|ref|XP_001135070.1| PREDICTED: serine ( 552) 819 201.6 1.6e-49 gi|158931158|sp|Q9NUV7.3|SPTC3_HUMAN RecName: Full ( 552) 819 201.6 1.6e-49 gi|223462383|gb|AAI50645.1| Serine palmitoyltransf ( 552) 819 201.6 1.6e-49 gi|50417196|gb|AAH78234.1| Zgc:101107 [Danio rerio ( 553) 810 199.4 7.2e-49 gi|156222143|gb|EDO42990.1| predicted protein [Nem ( 527) 805 198.2 1.6e-48 gi|83405111|gb|AAI10751.1| MGC130979 protein [Xeno ( 550) 780 192.3 9.7e-47 gi|72011105|ref|XP_784261.1| PREDICTED: similar to ( 549) 744 183.8 3.5e-44 gi|210122209|gb|EEA69917.1| hypothetical protein B ( 483) 731 180.7 2.7e-43 gi|47229007|emb|CAG09522.1| unnamed protein produc ( 462) 715 177.0 3.5e-42 gi|109092928|ref|XP_001082346.1| PREDICTED: simila ( 525) 711 176.0 7.5e-42 gi|74137930|dbj|BAE24102.1| unnamed protein produc ( 107) 700 173.0 1.3e-41 gi|114681051|ref|XP_001134977.1| PREDICTED: serine ( 523) 705 174.6 2e-41 gi|210116181|gb|EEA63927.1| hypothetical protein B ( 485) 700 173.4 4.3e-41 gi|221112812|ref|XP_002155095.1| PREDICTED: simila ( 480) 693 171.8 1.3e-40 gi|115920984|ref|XP_786894.2| PREDICTED: similar t ( 629) 690 171.1 2.7e-40 gi|81895983|sp|Q8BG54.1|SPTC3_MOUSE RecName: Full= ( 563) 689 170.9 2.9e-40 gi|148696455|gb|EDL28402.1| RIKEN cDNA C130053K05, ( 581) 689 170.9 3e-40 gi|149023423|gb|EDL80317.1| similar to RIKEN cDNA ( 563) 686 170.2 4.8e-40 gi|108884023|gb|EAT48248.1| serine palmitoyltransf ( 549) 676 167.8 2.4e-39 gi|167880097|gb|EDS43480.1| serine palmitoyltransf ( 552) 674 167.3 3.3e-39 gi|190618121|gb|EDV33645.1| GF13862 [Drosophila an ( 552) 673 167.1 3.9e-39 >>gi|74227484|dbj|BAE21805.1| unnamed protein product [M (266 aa) initn: 1171 init1: 1171 opt: 1171 Z-score: 1499.0 bits: 284.5 E(): 8.6e-75 Smith-Waterman score: 1171; 100.000% identity (100.000% similar) in 178 aa overlap (1-178:89-266) 10 20 30 mKIAA0 GGYIGGKKELIDYLRTHSHSAVYATSMSPP :::::::::::::::::::::::::::::: gi|742 SGRGVVDYFGLDPEDVDVMMGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSMSPP 60 70 80 90 100 110 40 50 60 70 80 90 mKIAA0 VMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 VMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY 120 130 140 150 160 170 100 110 120 130 140 150 mKIAA0 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL 180 190 200 210 220 230 160 170 mKIAA0 LQLKYSRHRLVPLLDRPFDETTYEETED :::::::::::::::::::::::::::: gi|742 LQLKYSRHRLVPLLDRPFDETTYEETED 240 250 260 >>gi|26348405|dbj|BAC37842.1| unnamed protein product [M (278 aa) initn: 1171 init1: 1171 opt: 1171 Z-score: 1498.8 bits: 284.5 E(): 8.9e-75 Smith-Waterman score: 1171; 100.000% identity (100.000% similar) in 178 aa overlap (1-178:101-278) 10 20 30 mKIAA0 GGYIGGKKELIDYLRTHSHSAVYATSMSPP :::::::::::::::::::::::::::::: gi|263 SGRGVVDYFGLDPEDVDVMMGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSMSPP 80 90 100 110 120 130 40 50 60 70 80 90 mKIAA0 VMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY 140 150 160 170 180 190 100 110 120 130 140 150 mKIAA0 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL 200 210 220 230 240 250 160 170 mKIAA0 LQLKYSRHRLVPLLDRPFDETTYEETED :::::::::::::::::::::::::::: gi|263 LQLKYSRHRLVPLLDRPFDETTYEETED 260 270 >>gi|6685600|sp|P97363.2|SPTC2_MOUSE RecName: Full=Serin (560 aa) initn: 1171 init1: 1171 opt: 1171 Z-score: 1494.3 bits: 284.7 E(): 1.6e-74 Smith-Waterman score: 1171; 100.000% identity (100.000% similar) in 178 aa overlap (1-178:383-560) 10 20 30 mKIAA0 GGYIGGKKELIDYLRTHSHSAVYATSMSPP :::::::::::::::::::::::::::::: gi|668 SGRGVVDYFGLDPEDVDVMMGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSMSPP 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA0 VMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|668 VMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA0 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|668 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL 480 490 500 510 520 530 160 170 mKIAA0 LQLKYSRHRLVPLLDRPFDETTYEETED :::::::::::::::::::::::::::: gi|668 LQLKYSRHRLVPLLDRPFDETTYEETED 540 550 560 >>gi|6685580|sp|O15270.1|SPTC2_HUMAN RecName: Full=Serin (562 aa) initn: 1160 init1: 1160 opt: 1160 Z-score: 1480.3 bits: 282.1 E(): 9.6e-74 Smith-Waterman score: 1160; 98.315% identity (100.000% similar) in 178 aa overlap (1-178:385-562) 10 20 30 mKIAA0 GGYIGGKKELIDYLRTHSHSAVYATSMSPP ::::::::::::::::::::::::::.::: gi|668 TGRGVVEYFGLDPEDVDVMMGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSLSPP 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA0 VMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY :.::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|668 VVEQIITSMKCIMGQDGTSLGKECVQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA0 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|668 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL 480 490 500 510 520 530 160 170 mKIAA0 LQLKYSRHRLVPLLDRPFDETTYEETED :::::::::::::::::::::::::::: gi|668 LQLKYSRHRLVPLLDRPFDETTYEETED 540 550 560 >>gi|78070460|gb|AAI07663.1| Protein-O-mannosyltransfera (560 aa) initn: 1158 init1: 1158 opt: 1158 Z-score: 1477.7 bits: 281.6 E(): 1.3e-73 Smith-Waterman score: 1158; 98.876% identity (99.438% similar) in 178 aa overlap (1-178:383-560) 10 20 30 mKIAA0 GGYIGGKKELIDYLRTHSHSAVYATSMSPP :::::::::::::::::::::::::::::: gi|780 SGRGVVDYFGLDPEDVDVMMGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSMSPP 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA0 VMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|780 VMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA0 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|780 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL 480 490 500 510 520 530 160 170 mKIAA0 LQLKYSRHRLVPLLDRPFDETTYEETED ::::::::: .::::::::::::::::: gi|780 LQLKYSRHRPLPLLDRPFDETTYEETED 540 550 560 >>gi|149025279|gb|EDL81646.1| protein-O-mannosyltransfer (562 aa) initn: 1158 init1: 1158 opt: 1158 Z-score: 1477.7 bits: 281.6 E(): 1.3e-73 Smith-Waterman score: 1158; 98.876% identity (99.438% similar) in 178 aa overlap (1-178:385-562) 10 20 30 mKIAA0 GGYIGGKKELIDYLRTHSHSAVYATSMSPP :::::::::::::::::::::::::::::: gi|149 SGRGVVDYFGLDPEDVDVMMGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSMSPP 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA0 VMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA0 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL 480 490 500 510 520 530 160 170 mKIAA0 LQLKYSRHRLVPLLDRPFDETTYEETED ::::::::: .::::::::::::::::: gi|149 LQLKYSRHRPLPLLDRPFDETTYEETED 540 550 560 >>gi|114654128|ref|XP_510095.2| PREDICTED: serine palmit (893 aa) initn: 1160 init1: 1160 opt: 1160 Z-score: 1477.3 bits: 282.2 E(): 1.4e-73 Smith-Waterman score: 1160; 98.315% identity (100.000% similar) in 178 aa overlap (1-178:716-893) 10 20 30 mKIAA0 GGYIGGKKELIDYLRTHSHSAVYATSMSPP ::::::::::::::::::::::::::.::: gi|114 TGRGVVEYFGLDPEDVDVMMGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSLSPP 690 700 710 720 730 740 40 50 60 70 80 90 mKIAA0 VMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY :.::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|114 VVEQIITSMKCIMGQDGTSLGKECVQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY 750 760 770 780 790 800 100 110 120 130 140 150 mKIAA0 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL 810 820 830 840 850 860 160 170 mKIAA0 LQLKYSRHRLVPLLDRPFDETTYEETED :::::::::::::::::::::::::::: gi|114 LQLKYSRHRLVPLLDRPFDETTYEETED 870 880 890 >>gi|194038623|ref|XP_001926625.1| PREDICTED: serine pal (586 aa) initn: 1157 init1: 1157 opt: 1157 Z-score: 1476.2 bits: 281.4 E(): 1.6e-73 Smith-Waterman score: 1157; 97.753% identity (100.000% similar) in 178 aa overlap (1-178:409-586) 10 20 30 mKIAA0 GGYIGGKKELIDYLRTHSHSAVYATSMSPP ::::::::::::::::::::::::::.::: gi|194 TGRGVVDYFGLDPEDVDIMMGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSLSPP 380 390 400 410 420 430 40 50 60 70 80 90 mKIAA0 VMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY :.::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|194 VVEQIITSMKCIMGQDGTTLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY 440 450 460 470 480 490 100 110 120 130 140 150 mKIAA0 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|194 MPAKIGAFGREMLKRNVGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL 500 510 520 530 540 550 160 170 mKIAA0 LQLKYSRHRLVPLLDRPFDETTYEETED :::::::::::::::::::::::::::: gi|194 LQLKYSRHRLVPLLDRPFDETTYEETED 560 570 580 >>gi|149737556|ref|XP_001492046.1| PREDICTED: serine pal (528 aa) initn: 1154 init1: 1154 opt: 1154 Z-score: 1473.0 bits: 280.7 E(): 2.4e-73 Smith-Waterman score: 1154; 97.191% identity (100.000% similar) in 178 aa overlap (1-178:351-528) 10 20 30 mKIAA0 GGYIGGKKELIDYLRTHSHSAVYATSMSPP ::::::::::::::::::::::::::.::: gi|149 TGRGVVDYFGLDPEDVDVMMGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSLSPP 330 340 350 360 370 380 40 50 60 70 80 90 mKIAA0 VMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY :.:::.::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|149 VVEQIVTSMKCIMGQDGTTLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY 390 400 410 420 430 440 100 110 120 130 140 150 mKIAA0 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|149 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTREILDTALKEIDEVGDL 450 460 470 480 490 500 160 170 mKIAA0 LQLKYSRHRLVPLLDRPFDETTYEETED :::::::::::::::::::::::::::: gi|149 LQLKYSRHRLVPLLDRPFDETTYEETED 510 520 >>gi|6685594|sp|O54694.1|SPTC2_CRIGR RecName: Full=Serin (560 aa) initn: 1148 init1: 1148 opt: 1148 Z-score: 1465.0 bits: 279.3 E(): 6.8e-73 Smith-Waterman score: 1148; 97.191% identity (99.438% similar) in 178 aa overlap (1-178:383-560) 10 20 30 mKIAA0 GGYIGGKKELIDYLRTHSHSAVYATSMSPP :::::::: ::::::::::::::::::::: gi|668 SGRGVVDYFGLDPEDVDVMMGTFTKSFGASGGYIGGKKALIDYLRTHSHSAVYATSMSPP 360 370 380 390 400 410 40 50 60 70 80 90 mKIAA0 VMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLY ::::::::::::::::::::::::.:::::::.::::::::::::::::::::::::::: gi|668 VMEQIITSMKCIMGQDGTSLGKECVQQLAENTKYFRRRLKEMGFIIYGNEDSPVVPLMLY 420 430 440 450 460 470 100 110 120 130 140 150 mKIAA0 MPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|668 MPAKIGAFGREMLKRNVGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDL 480 490 500 510 520 530 160 170 mKIAA0 LQLKYSRHRLVPLLDRPFDETTYEETED :::::::.:::::::::::::::::::: gi|668 LQLKYSRRRLVPLLDRPFDETTYEETED 540 550 560 178 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 01:06:25 2009 done: Sun Mar 15 01:10:49 2009 Total Scan time: 634.610 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]