# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mek00815.fasta.nr -Q ../query/mKIAA1953.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1953, 248 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921277 sequences Expectation_n fit: rho(ln(x))= 4.8029+/-0.000179; mu= 10.5114+/- 0.010 mean_var=61.6567+/-11.930, 0's: 31 Z-trim: 31 B-trim: 0 in 0/67 Lambda= 0.163337 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148676058|gb|EDL08005.1| inter-alpha (globulin) ( 918) 1665 400.8 4.1e-109 gi|81873944|sp|Q8BJD1.1|ITIH5_MOUSE RecName: Full= ( 952) 1665 400.8 4.2e-109 gi|74183702|dbj|BAE24467.1| unnamed protein produc ( 952) 1665 400.8 4.2e-109 gi|149021014|gb|EDL78621.1| rCG55860, isoform CRA_ ( 919) 1471 355.1 2.4e-95 gi|149021013|gb|EDL78620.1| rCG55860, isoform CRA_ ( 953) 1471 355.1 2.4e-95 gi|109506146|ref|XP_001069890.1| PREDICTED: simila (1107) 1471 355.1 2.7e-95 gi|194227185|ref|XP_001916970.1| PREDICTED: inter- ( 905) 1279 309.8 9.7e-82 gi|56403909|emb|CAI29739.1| hypothetical protein [ ( 694) 1270 307.6 3.4e-81 gi|207028763|ref|NP_001124799.1| inter-alpha (glob ( 942) 1270 307.7 4.3e-81 gi|119606787|gb|EAW86381.1| inter-alpha (globulin) ( 748) 1246 302.0 1.8e-79 gi|73949160|ref|XP_544264.2| PREDICTED: similar to ( 893) 1246 302.0 2.1e-79 gi|14042009|dbj|BAB55070.1| unnamed protein produc ( 942) 1246 302.1 2.2e-79 gi|119606785|gb|EAW86379.1| inter-alpha (globulin) ( 942) 1246 302.1 2.2e-79 gi|30314037|gb|AAO49812.1| inter-alpha trypsin inh ( 942) 1245 301.8 2.6e-79 gi|75055238|sp|Q5RER0.1|ITIH5_PONAB RecName: Full= ( 940) 1238 300.2 8.1e-79 gi|187609608|sp|Q86UX2.2|ITIH5_HUMAN RecName: Full ( 942) 1238 300.2 8.1e-79 gi|55958058|emb|CAI12953.1| inter-alpha (globulin) ( 742) 1226 297.3 4.8e-78 gi|55958060|emb|CAI12955.1| inter-alpha (globulin) ( 956) 1226 297.3 5.8e-78 gi|187609595|sp|A2VE29.1|ITIH5_BOVIN RecName: Full ( 940) 1210 293.6 7.8e-77 gi|149437045|ref|XP_001515975.1| PREDICTED: simila ( 949) 1123 273.1 1.2e-70 gi|118081959|ref|XP_417299.2| PREDICTED: similar t ( 955) 1031 251.4 3.9e-64 gi|123228966|emb|CAI21016.2| novel protein similar ( 906) 856 210.1 9.8e-52 gi|189518186|ref|XP_001331201.2| PREDICTED: inter- ( 969) 856 210.2 1e-51 gi|116284252|gb|AAI24051.1| LOC779593 protein [Xen ( 954) 710 175.8 2.3e-41 gi|166796269|gb|AAI59125.1| LOC779593 protein [Xen ( 973) 710 175.8 2.4e-41 gi|47218290|emb|CAG04122.1| unnamed protein produc ( 993) 706 174.8 4.6e-41 gi|149637338|ref|XP_001510478.1| PREDICTED: simila (1374) 392 100.9 1.1e-18 gi|149031330|gb|EDL86328.1| rCG38899 [Rattus norve (1029) 386 99.4 2.4e-18 gi|210119185|gb|EEA66912.1| hypothetical protein B ( 863) 370 95.6 2.8e-17 gi|148675553|gb|EDL07500.1| mCG120277 [Mus musculu (1031) 369 95.4 3.8e-17 gi|74762375|sp|Q6UXX5.1|ITH5L_HUMAN RecName: Full= (1313) 361 93.6 1.7e-16 gi|119613594|gb|EAW93188.1| inter-alpha (globulin) (1350) 361 93.6 1.7e-16 gi|149477903|ref|XP_001511211.1| PREDICTED: simila ( 264) 341 88.4 1.3e-15 gi|71051796|gb|AAH98981.1| LOC495168 protein [Xeno ( 935) 342 89.0 2.9e-15 gi|11041696|dbj|BAB17301.1| inter-alpha-trypsin in ( 946) 341 88.8 3.5e-15 gi|221044458|dbj|BAH13906.1| unnamed protein produ ( 623) 338 88.0 4.1e-15 gi|109088171|ref|XP_001107718.1| PREDICTED: simila ( 946) 340 88.6 4.1e-15 gi|55730948|emb|CAH92192.1| hypothetical protein [ ( 911) 339 88.3 4.7e-15 gi|221044450|dbj|BAH13902.1| unnamed protein produ ( 623) 337 87.7 4.8e-15 gi|825681|emb|CAA34346.1| inter-alpha-trypsin inhi ( 837) 338 88.1 5.1e-15 gi|114587334|ref|XP_516520.2| PREDICTED: inter-alp ( 723) 337 87.8 5.4e-15 gi|74011920|ref|XP_548489.2| PREDICTED: similar to ( 897) 338 88.1 5.4e-15 gi|2851501|sp|P19827.3|ITIH1_HUMAN RecName: Full=I ( 911) 338 88.1 5.5e-15 gi|119585665|gb|EAW65261.1| inter-alpha (globulin) ( 911) 338 88.1 5.5e-15 gi|33989|emb|CAA45188.1| inter-alpha-trypsin inhib ( 911) 338 88.1 5.5e-15 gi|189054356|dbj|BAG36876.1| unnamed protein produ ( 911) 338 88.1 5.5e-15 gi|73949158|ref|XP_535195.2| PREDICTED: similar to ( 946) 338 88.1 5.6e-15 gi|110331845|gb|ABG67028.1| inter-alpha (globulin) ( 889) 337 87.8 6.3e-15 gi|160332333|sp|P56652.2|ITIH3_BOVIN RecName: Full ( 891) 337 87.8 6.3e-15 gi|114587330|ref|XP_001172443.1| PREDICTED: inter- ( 898) 337 87.8 6.4e-15 >>gi|148676058|gb|EDL08005.1| inter-alpha (globulin) inh (918 aa) initn: 1665 init1: 1665 opt: 1665 Z-score: 2115.3 bits: 400.8 E(): 4.1e-109 Smith-Waterman score: 1665; 100.000% identity (100.000% similar) in 248 aa overlap (1-248:671-918) 10 20 30 mKIAA1 DILRLVSDHLNSGVTVNGELIGAPAPPNGH :::::::::::::::::::::::::::::: gi|148 KTSVDGDPHFVVDFPLSKLTVCFNIDGEPGDILRLVSDHLNSGVTVNGELIGAPAPPNGH 650 660 670 680 690 700 40 50 60 70 80 90 mKIAA1 KKQRTYFRTITILINRPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSRGLEVSVSANA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KKQRTYFRTITILINRPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSRGLEVSVSANA 710 720 730 740 750 760 100 110 120 130 140 150 mKIAA1 NITVVIQGNIAFVILIHLYKNPAPFQRDHLGFYIANSRGLSDNCHGLLGQFLNQDAKLVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NITVVIQGNIAFVILIHLYKNPAPFQRDHLGFYIANSRGLSDNCHGLLGQFLNQDAKLVG 770 780 790 800 810 820 160 170 180 190 200 210 mKIAA1 APEEYGKNLSNQPFPRAEGMPEAILKVKGRRVPVVWKQRKIYNGQAQVDCWFDRNNAAKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 APEEYGKNLSNQPFPRAEGMPEAILKVKGRRVPVVWKQRKIYNGQAQVDCWFDRNNAAKL 830 840 850 860 870 880 220 230 240 mKIAA1 IDGVYKDYLASHPFDTESALGLSTPRKPETDRPHEESV :::::::::::::::::::::::::::::::::::::: gi|148 IDGVYKDYLASHPFDTESALGLSTPRKPETDRPHEESV 890 900 910 >>gi|81873944|sp|Q8BJD1.1|ITIH5_MOUSE RecName: Full=Inte (952 aa) initn: 1665 init1: 1665 opt: 1665 Z-score: 2115.1 bits: 400.8 E(): 4.2e-109 Smith-Waterman score: 1665; 100.000% identity (100.000% similar) in 248 aa overlap (1-248:705-952) 10 20 30 mKIAA1 DILRLVSDHLNSGVTVNGELIGAPAPPNGH :::::::::::::::::::::::::::::: gi|818 KTSVDGDPHFVVDFPLSKLTVCFNIDGEPGDILRLVSDHLNSGVTVNGELIGAPAPPNGH 680 690 700 710 720 730 40 50 60 70 80 90 mKIAA1 KKQRTYFRTITILINRPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSRGLEVSVSANA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 KKQRTYFRTITILINRPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSRGLEVSVSANA 740 750 760 770 780 790 100 110 120 130 140 150 mKIAA1 NITVVIQGNIAFVILIHLYKNPAPFQRDHLGFYIANSRGLSDNCHGLLGQFLNQDAKLVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 NITVVIQGNIAFVILIHLYKNPAPFQRDHLGFYIANSRGLSDNCHGLLGQFLNQDAKLVG 800 810 820 830 840 850 160 170 180 190 200 210 mKIAA1 APEEYGKNLSNQPFPRAEGMPEAILKVKGRRVPVVWKQRKIYNGQAQVDCWFDRNNAAKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 APEEYGKNLSNQPFPRAEGMPEAILKVKGRRVPVVWKQRKIYNGQAQVDCWFDRNNAAKL 860 870 880 890 900 910 220 230 240 mKIAA1 IDGVYKDYLASHPFDTESALGLSTPRKPETDRPHEESV :::::::::::::::::::::::::::::::::::::: gi|818 IDGVYKDYLASHPFDTESALGLSTPRKPETDRPHEESV 920 930 940 950 >>gi|74183702|dbj|BAE24467.1| unnamed protein product [M (952 aa) initn: 1665 init1: 1665 opt: 1665 Z-score: 2115.1 bits: 400.8 E(): 4.2e-109 Smith-Waterman score: 1665; 100.000% identity (100.000% similar) in 248 aa overlap (1-248:705-952) 10 20 30 mKIAA1 DILRLVSDHLNSGVTVNGELIGAPAPPNGH :::::::::::::::::::::::::::::: gi|741 KTSVDGDPHFVVDFPLSKLTVCFNIDGEPGDILRLVSDHLNSGVTVNGELIGAPAPPNGH 680 690 700 710 720 730 40 50 60 70 80 90 mKIAA1 KKQRTYFRTITILINRPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSRGLEVSVSANA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KKQRTYFRTITILINRPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSRGLEVSVSANA 740 750 760 770 780 790 100 110 120 130 140 150 mKIAA1 NITVVIQGNIAFVILIHLYKNPAPFQRDHLGFYIANSRGLSDNCHGLLGQFLNQDAKLVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 NITVVIQGNIAFVILIHLYKNPAPFQRDHLGFYIANSRGLSDNCHGLLGQFLNQDAKLVG 800 810 820 830 840 850 160 170 180 190 200 210 mKIAA1 APEEYGKNLSNQPFPRAEGMPEAILKVKGRRVPVVWKQRKIYNGQAQVDCWFDRNNAAKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 APEEYGKNLSNQPFPRAEGMPEAILKVKGRRVPVVWKQRKIYNGQAQVDCWFDRNNAAKL 860 870 880 890 900 910 220 230 240 mKIAA1 IDGVYKDYLASHPFDTESALGLSTPRKPETDRPHEESV :::::::::::::::::::::::::::::::::::::: gi|741 IDGVYKDYLASHPFDTESALGLSTPRKPETDRPHEESV 920 930 940 950 >>gi|149021014|gb|EDL78621.1| rCG55860, isoform CRA_b [R (919 aa) initn: 1021 init1: 993 opt: 1471 Z-score: 1868.2 bits: 355.1 E(): 2.4e-95 Smith-Waterman score: 1471; 89.516% identity (94.355% similar) in 248 aa overlap (1-247:671-918) 10 20 30 mKIAA1 DILRLVSDHLNSGVTVNGELIGAPAPPNGH ::::::::::.::::::::::::::::::: gi|149 KTSVDGDPHFVVDFPISKLTVCFNIDGEPGDILRLVSDHLGSGVTVNGELIGAPAPPNGH 650 660 670 680 690 700 40 50 60 70 80 90 mKIAA1 KKQRTYFRTITILINRPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSRGLEVSVSANA ::.::::::::::::.::::::::::.:::::::::::::::::.::::::::::::::: gi|149 KKHRTYFRTITILINQPERSYLEITPNRVILDGGDRLVLPCNQSMVVGSRGLEVSVSANA 710 720 730 740 750 760 100 110 120 130 140 150 mKIAA1 NITVVIQGNIAFVILIHLYKNPAPFQRDHLGFYIANSRGLSDNCHGLLGQFLNQDAKLVG :.::.:::.:::::::::::.::::::.:::::::::.::: :::::::::::::::::: gi|149 NVTVTIQGTIAFVILIHLYKKPAPFQRNHLGFYIANSKGLSHNCHGLLGQFLNQDAKLVG 770 780 790 800 810 820 160 170 180 190 200 mKIAA1 APEEYGKNLSN-QPFPRAEGMPEAILKVKGRRVPVVWKQRKIYNGQAQVDCWFDRNNAAK ::::::::::: :: :::::::::::::::::::::::::::::: :::::::.::::: gi|149 APEEYGKNLSNHQPSPRAEGMPEAILKVKGRRVPVVWKQRKIYNGLEQVDCWFDKNNAAK 830 840 850 860 870 880 210 220 230 240 mKIAA1 LIDGVYKDYLASHPFDTESALGLSTPRKPETDRPHEESV ::::::::::: :::::::: : : :: : : :::: gi|149 LIDGVYKDYLALHPFDTESARGPSMSRKAEPDSLHEESA 890 900 910 >>gi|149021013|gb|EDL78620.1| rCG55860, isoform CRA_a [R (953 aa) initn: 1021 init1: 993 opt: 1471 Z-score: 1868.0 bits: 355.1 E(): 2.4e-95 Smith-Waterman score: 1471; 89.516% identity (94.355% similar) in 248 aa overlap (1-247:705-952) 10 20 30 mKIAA1 DILRLVSDHLNSGVTVNGELIGAPAPPNGH ::::::::::.::::::::::::::::::: gi|149 KTSVDGDPHFVVDFPISKLTVCFNIDGEPGDILRLVSDHLGSGVTVNGELIGAPAPPNGH 680 690 700 710 720 730 40 50 60 70 80 90 mKIAA1 KKQRTYFRTITILINRPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSRGLEVSVSANA ::.::::::::::::.::::::::::.:::::::::::::::::.::::::::::::::: gi|149 KKHRTYFRTITILINQPERSYLEITPNRVILDGGDRLVLPCNQSMVVGSRGLEVSVSANA 740 750 760 770 780 790 100 110 120 130 140 150 mKIAA1 NITVVIQGNIAFVILIHLYKNPAPFQRDHLGFYIANSRGLSDNCHGLLGQFLNQDAKLVG :.::.:::.:::::::::::.::::::.:::::::::.::: :::::::::::::::::: gi|149 NVTVTIQGTIAFVILIHLYKKPAPFQRNHLGFYIANSKGLSHNCHGLLGQFLNQDAKLVG 800 810 820 830 840 850 160 170 180 190 200 mKIAA1 APEEYGKNLSN-QPFPRAEGMPEAILKVKGRRVPVVWKQRKIYNGQAQVDCWFDRNNAAK ::::::::::: :: :::::::::::::::::::::::::::::: :::::::.::::: gi|149 APEEYGKNLSNHQPSPRAEGMPEAILKVKGRRVPVVWKQRKIYNGLEQVDCWFDKNNAAK 860 870 880 890 900 910 210 220 230 240 mKIAA1 LIDGVYKDYLASHPFDTESALGLSTPRKPETDRPHEESV ::::::::::: :::::::: : : :: : : :::: gi|149 LIDGVYKDYLALHPFDTESARGPSMSRKAEPDSLHEESA 920 930 940 950 >>gi|109506146|ref|XP_001069890.1| PREDICTED: similar to (1107 aa) initn: 1021 init1: 993 opt: 1471 Z-score: 1867.1 bits: 355.1 E(): 2.7e-95 Smith-Waterman score: 1471; 89.516% identity (94.355% similar) in 248 aa overlap (1-247:859-1106) 10 20 30 mKIAA1 DILRLVSDHLNSGVTVNGELIGAPAPPNGH ::::::::::.::::::::::::::::::: gi|109 KTSVDGDPHFVVDFPISKLTVCFNIDGEPGDILRLVSDHLGSGVTVNGELIGAPAPPNGH 830 840 850 860 870 880 40 50 60 70 80 90 mKIAA1 KKQRTYFRTITILINRPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSRGLEVSVSANA ::.::::::::::::.::::::::::.:::::::::::::::::.::::::::::::::: gi|109 KKHRTYFRTITILINQPERSYLEITPNRVILDGGDRLVLPCNQSMVVGSRGLEVSVSANA 890 900 910 920 930 940 100 110 120 130 140 150 mKIAA1 NITVVIQGNIAFVILIHLYKNPAPFQRDHLGFYIANSRGLSDNCHGLLGQFLNQDAKLVG :.::.:::.:::::::::::.::::::.:::::::::.::: :::::::::::::::::: gi|109 NVTVTIQGTIAFVILIHLYKKPAPFQRNHLGFYIANSKGLSHNCHGLLGQFLNQDAKLVG 950 960 970 980 990 1000 160 170 180 190 200 mKIAA1 APEEYGKNLSN-QPFPRAEGMPEAILKVKGRRVPVVWKQRKIYNGQAQVDCWFDRNNAAK ::::::::::: :: :::::::::::::::::::::::::::::: :::::::.::::: gi|109 APEEYGKNLSNHQPSPRAEGMPEAILKVKGRRVPVVWKQRKIYNGLEQVDCWFDKNNAAK 1010 1020 1030 1040 1050 1060 210 220 230 240 mKIAA1 LIDGVYKDYLASHPFDTESALGLSTPRKPETDRPHEESV ::::::::::: :::::::: : : :: : : :::: gi|109 LIDGVYKDYLALHPFDTESARGPSMSRKAEPDSLHEESA 1070 1080 1090 1100 >>gi|194227185|ref|XP_001916970.1| PREDICTED: inter-alph (905 aa) initn: 1307 init1: 1279 opt: 1279 Z-score: 1623.8 bits: 309.8 E(): 9.7e-82 Smith-Waterman score: 1279; 81.579% identity (93.421% similar) in 228 aa overlap (1-228:662-889) 10 20 30 mKIAA1 DILRLVSDHLNSGVTVNGELIGAPAPPNGH :::::::::..::::::::::::::::::: gi|194 KTSVDGDPHFVVDFPLSQLTVCFNIDGEPGDILRLVSDHMDSGVTVNGELIGAPAPPNGH 640 650 660 670 680 690 40 50 60 70 80 90 mKIAA1 KKQRTYFRTITILINRPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSRGLEVSVSANA :::::::::::::.:.:::::::::::::::::::::::::::::::::::::::::::: gi|194 KKQRTYFRTITILVNKPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSRGLEVSVSANA 700 710 720 730 740 750 100 110 120 130 140 150 mKIAA1 NITVVIQGNIAFVILIHLYKNPAPFQRDHLGFYIANSRGLSDNCHGLLGQFLNQDAKLVG :.::.:::.:::::::::::.:::.:::::::::.::.::: ::::::::::::::... gi|194 NVTVTIQGTIAFVILIHLYKKPAPYQRDHLGFYISNSKGLSGNCHGLLGQFLNQDARVAE 760 770 780 790 800 810 160 170 180 190 200 210 mKIAA1 APEEYGKNLSNQPFPRAEGMPEAILKVKGRRVPVVWKQRKIYNGQAQVDCWFDRNNAAKL . .:::.. ::.: ::.::::::..:::::::::::::. :.:::: :::: :: gi|194 ESARLSKNLTSPLFPKAGERPETILKVKGHQVPVVWKQRKIYNGEEQIDCWFARNNADKL 820 830 840 850 860 870 220 230 240 mKIAA1 IDGVYKDYLASHPFDTESALGLSTPRKPETDRPHEESV ::: ::::::.::::.:. gi|194 IDGKYKDYLAAHPFDSETVWPGNIQGTLTLAALT 880 890 900 >>gi|56403909|emb|CAI29739.1| hypothetical protein [Pong (694 aa) initn: 1267 init1: 1267 opt: 1270 Z-score: 1614.0 bits: 307.6 E(): 3.4e-81 Smith-Waterman score: 1270; 80.169% identity (91.561% similar) in 237 aa overlap (1-237:457-693) 10 20 30 mKIAA1 DILRLVSDHLNSGVTVNGELIGAPAPPNGH :::::::::..::::::::::::::::::: gi|564 KTSVDGDPHFVVDFPLSKLTVCFNIDGQPGDILRLVSDHMDSGVTVNGELIGAPAPPNGH 430 440 450 460 470 480 40 50 60 70 80 90 mKIAA1 KKQRTYFRTITILINRPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSRGLEVSVSANA :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|564 KKQRTYFRTITILINKPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSRGLEVSVSANA 490 500 510 520 530 540 100 110 120 130 140 150 mKIAA1 NITVVIQGNIAFVILIHLYKNPAPFQRDHLGFYIANSRGLSDNCHGLLGQFLNQDAKLVG :.::.:::.:::::::::::.:::::: :::::::::.:::.::::::::::::::.:. gi|564 NVTVTIQGSIAFVILIHLYKKPAPFQRHHLGFYIANSEGLSSNCHGLLGQFLNQDARLTE 550 560 570 580 590 600 160 170 180 190 200 210 mKIAA1 APEEYGKNLSNQPFPRAEGMPEAILKVKGRRVPVVWKQRKIYNGQAQVDCWFDRNNAAKL : ..::... . .. :::.: ::::.:::::::::::::. ..:::: ::::::: gi|564 DPAGPSQNLTHSLLLQVGEGPEAVLTVKGRQVPVVWKQRKIYNGEERIDCWFARNNAAKL 610 620 630 640 650 660 220 230 240 mKIAA1 IDGVYKDYLASHPFDTESALGLSTPRKPETDRPHEESV ::: :::::::::::: .:: . :. gi|564 IDGEYKDYLASHPFDTGMTLGRGMSREL 670 680 690 >>gi|207028763|ref|NP_001124799.1| inter-alpha (globulin (942 aa) initn: 1267 init1: 1267 opt: 1270 Z-score: 1612.1 bits: 307.7 E(): 4.3e-81 Smith-Waterman score: 1270; 80.169% identity (91.561% similar) in 237 aa overlap (1-237:705-941) 10 20 30 mKIAA1 DILRLVSDHLNSGVTVNGELIGAPAPPNGH :::::::::..::::::::::::::::::: gi|207 KTSVDGDPHFVVDFPLSKLTVCFNIDGQPGDILRLVSDHMDSGVTVNGELIGAPAPPNGH 680 690 700 710 720 730 40 50 60 70 80 90 mKIAA1 KKQRTYFRTITILINRPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSRGLEVSVSANA :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|207 KKQRTYFRTITILINKPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSRGLEVSVSANA 740 750 760 770 780 790 100 110 120 130 140 150 mKIAA1 NITVVIQGNIAFVILIHLYKNPAPFQRDHLGFYIANSRGLSDNCHGLLGQFLNQDAKLVG :.::.:::.:::::::::::.:::::: :::::::::.:::.::::::::::::::.:. gi|207 NVTVTIQGSIAFVILIHLYKKPAPFQRHHLGFYIANSEGLSSNCHGLLGQFLNQDARLTE 800 810 820 830 840 850 160 170 180 190 200 210 mKIAA1 APEEYGKNLSNQPFPRAEGMPEAILKVKGRRVPVVWKQRKIYNGQAQVDCWFDRNNAAKL : ..::... . .. :::.: ::::.:::::::::::::. ..:::: ::::::: gi|207 DPAGPSQNLTHSLLLQVGEGPEAVLTVKGRQVPVVWKQRKIYNGEERIDCWFARNNAAKL 860 870 880 890 900 910 220 230 240 mKIAA1 IDGVYKDYLASHPFDTESALGLSTPRKPETDRPHEESV ::: :::::::::::: .:: . :. gi|207 IDGEYKDYLASHPFDTGMTLGRGMSREL 920 930 940 >>gi|119606787|gb|EAW86381.1| inter-alpha (globulin) inh (748 aa) initn: 1246 init1: 1246 opt: 1246 Z-score: 1583.0 bits: 302.0 E(): 1.8e-79 Smith-Waterman score: 1246; 79.325% identity (90.295% similar) in 237 aa overlap (1-237:511-747) 10 20 30 mKIAA1 DILRLVSDHLNSGVTVNGELIGAPAPPNGH ::::::::: .::::::::::::::::::: gi|119 KTSVDGDPHFVVDFPLSRLTVCFNIDGQPGDILRLVSDHRDSGVTVNGELIGAPAPPNGH 490 500 510 520 530 540 40 50 60 70 80 90 mKIAA1 KKQRTYFRTITILINRPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSRGLEVSVSANA ::::::.::::::::.::::::::::::::::::::::::::::::::: :::::::::: gi|119 KKQRTYLRTITILINKPERSYLEITPSRVILDGGDRLVLPCNQSVVVGSWGLEVSVSANA 550 560 570 580 590 600 100 110 120 130 140 150 mKIAA1 NITVVIQGNIAFVILIHLYKNPAPFQRDHLGFYIANSRGLSDNCHGLLGQFLNQDAKLVG :.::.:::.:::::::::::.:::::: :::::::::.:::.::::::::::::::.:. gi|119 NVTVTIQGSIAFVILIHLYKKPAPFQRHHLGFYIANSEGLSSNCHGLLGQFLNQDARLTE 610 620 630 640 650 660 160 170 180 190 200 210 mKIAA1 APEEYGKNLSNQPFPRAEGMPEAILKVKGRRVPVVWKQRKIYNGQAQVDCWFDRNNAAKL : ..::.. . .. :::.: :::..:::::::::::::. :.:::: ::::::: gi|119 DPAGPSQNLTHPLLLQVGEGPEAVLTVKGHQVPVVWKQRKIYNGEEQIDCWFARNNAAKL 670 680 690 700 710 720 220 230 240 mKIAA1 IDGVYKDYLASHPFDTESALGLSTPRKPETDRPHEESV ::: :::::::::::: .:: . :. gi|119 IDGEYKDYLASHPFDTGMTLGQGMSREL 730 740 248 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 13:08:08 2009 done: Mon Mar 16 13:13:18 2009 Total Scan time: 730.640 Total Display time: 0.070 Function used was FASTA [version 34.26.5 April 26, 2007]