# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mej02415.fasta.nr -Q ../query/mFLJ00042.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00042, 498 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920509 sequences Expectation_n fit: rho(ln(x))= 4.9920+/-0.000182; mu= 12.5399+/- 0.010 mean_var=69.4013+/-13.833, 0's: 35 Z-trim: 38 B-trim: 2758 in 1/64 Lambda= 0.153954 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|81914514|sp|Q8JZN7.1|MIRO2_MOUSE RecName: Full= ( 620) 3412 767.0 0 gi|81912643|sp|Q7TSA0.1|MIRO2_RAT RecName: Full=Mi ( 622) 3177 714.8 1.6e-203 gi|149052153|gb|EDM03970.1| ras homolog gene famil ( 626) 3159 710.8 2.6e-202 gi|14336708|gb|AAK61240.1|AE006464_8 similar to AK ( 615) 2836 639.1 1e-180 gi|108860798|sp|Q8IXI1.2|MIRO2_HUMAN RecName: Full ( 618) 2829 637.5 3e-180 gi|25187967|emb|CAD56957.1| mitochondrial Rho 2 [H ( 618) 2801 631.3 2.3e-178 gi|194219430|ref|XP_001497143.2| PREDICTED: ras ho ( 621) 2753 620.6 3.7e-175 gi|114660196|ref|XP_001155477.1| PREDICTED: ras ho ( 509) 2732 615.9 8e-174 gi|114660194|ref|XP_001155839.1| PREDICTED: ras ho ( 598) 2732 615.9 9e-174 gi|114660192|ref|XP_510715.2| PREDICTED: ras homol ( 616) 2732 616.0 9.2e-174 gi|73959829|ref|XP_537019.2| PREDICTED: similar to ( 616) 2726 614.6 2.3e-173 gi|75070046|sp|Q5E9M9.1|MIRO2_BOVIN RecName: Full= ( 618) 2695 607.7 2.8e-171 gi|31126975|gb|AAP04409.2| miro protein [Bos tauru ( 618) 2695 607.7 2.8e-171 gi|75072868|sp|Q864R5.1|MIRO2_PIG RecName: Full=Mi ( 620) 2423 547.3 4.2e-153 gi|148690519|gb|EDL22466.1| ras homolog gene famil ( 366) 2408 543.8 2.8e-152 gi|126335285|ref|XP_001365487.1| PREDICTED: hypoth ( 618) 2398 541.8 2e-151 gi|126335287|ref|XP_001365557.1| PREDICTED: hypoth ( 621) 2386 539.1 1.3e-150 gi|82082858|sp|Q5ZM83.1|MIRO2_CHICK RecName: Full= ( 618) 2368 535.1 2e-149 gi|82183440|sp|Q6DIS1.1|MIRO2_XENTR RecName: Full= ( 616) 2235 505.6 1.6e-140 gi|18605891|gb|AAH23163.1| Arht2 protein [Mus musc ( 343) 2154 487.4 2.6e-135 gi|108860797|sp|Q32LU1.1|MIRO2_DANRE RecName: Full ( 617) 2027 459.4 1.3e-126 gi|224074581|ref|XP_002198622.1| PREDICTED: ras ho ( 618) 1984 449.8 9.5e-124 gi|82233942|sp|Q5ZM73.1|MIRO1_CHICK RecName: Full= ( 619) 1981 449.2 1.5e-123 gi|82237231|sp|Q6NVC5.1|MIRO1_DANRE RecName: Full= ( 619) 1971 446.9 7.1e-123 gi|189520624|ref|XP_001923072.1| PREDICTED: ras ho ( 619) 1970 446.7 8.2e-123 gi|194217306|ref|XP_001501695.2| PREDICTED: simila ( 680) 1957 443.9 6.5e-122 gi|26385189|dbj|BAB31529.2| unnamed protein produc ( 631) 1950 442.3 1.8e-121 gi|81913089|sp|Q8BG51.1|MIRO1_MOUSE RecName: Full= ( 631) 1950 442.3 1.8e-121 gi|148683684|gb|EDL15631.1| ras homolog gene famil ( 635) 1950 442.3 1.8e-121 gi|108860795|sp|Q2HJF8.1|MIRO1_BOVIN RecName: Full ( 631) 1948 441.8 2.5e-121 gi|120537444|gb|AAI29124.1| Rhot1 protein [Rattus ( 631) 1947 441.6 2.9e-121 gi|119600657|gb|EAW80251.1| ras homolog gene famil ( 597) 1945 441.1 3.8e-121 gi|108860796|sp|Q8IXI2.2|MIRO1_HUMAN RecName: Full ( 618) 1945 441.2 3.9e-121 gi|27882079|gb|AAH44431.1| Ras homolog gene family ( 619) 1945 441.2 3.9e-121 gi|26996622|gb|AAH41114.1| RHOT1 protein [Homo sap ( 675) 1945 441.2 4.1e-121 gi|73966876|ref|XP_867966.1| PREDICTED: similar to ( 631) 1942 440.5 6.2e-121 gi|119600655|gb|EAW80249.1| ras homolog gene famil ( 491) 1938 439.5 9.5e-121 gi|127801248|gb|AAH60781.2| Ras homolog gene famil ( 618) 1939 439.8 9.7e-121 gi|117645238|emb|CAL38085.1| hypothetical protein ( 618) 1938 439.6 1.1e-120 gi|25187965|emb|CAD56956.1| mitochondrial Rho 1 [H ( 618) 1936 439.2 1.5e-120 gi|26327061|dbj|BAC27274.1| unnamed protein produc ( 491) 1929 437.5 3.8e-120 gi|115528357|gb|AAI24985.1| LOC100158403 protein [ ( 618) 1930 437.8 3.9e-120 gi|149504540|ref|XP_001518555.1| PREDICTED: hypoth ( 467) 1920 435.5 1.5e-119 gi|183396454|gb|ACC62129.1| mitochondrial Rho 2 (p ( 443) 1895 429.9 6.6e-118 gi|119606170|gb|EAW85764.1| ras homolog gene famil ( 374) 1892 429.2 9.2e-118 gi|7023456|dbj|BAA91969.1| unnamed protein product ( 484) 1892 429.3 1.1e-117 gi|224074585|ref|XP_002198633.1| PREDICTED: ras ho ( 659) 1886 428.1 3.6e-117 gi|169146706|emb|CAQ15136.1| novel protein similar ( 660) 1855 421.2 4.2e-115 gi|126313991|ref|XP_001374644.1| PREDICTED: hypoth ( 688) 1854 421.0 5.1e-115 gi|74195528|dbj|BAE39578.1| unnamed protein produc ( 672) 1852 420.5 6.8e-115 >>gi|81914514|sp|Q8JZN7.1|MIRO2_MOUSE RecName: Full=Mito (620 aa) initn: 3412 init1: 3412 opt: 3412 Z-score: 4092.1 bits: 767.0 E(): 0 Smith-Waterman score: 3412; 100.000% identity (100.000% similar) in 498 aa overlap (1-498:123-620) 10 20 30 mFLJ00 RPGSTMEAVLPIMSQFPEIETCVECSAKHL :::::::::::::::::::::::::::::: gi|819 IRTKWIPLVNGRTATGPRLPIILVGNKSDLRPGSTMEAVLPIMSQFPEIETCVECSAKHL 100 110 120 130 140 150 40 50 60 70 80 90 mFLJ00 RNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDRDHGLSDEELNAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 RNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDRDHGLSDEELNAF 160 170 180 190 200 210 100 110 120 130 140 150 mFLJ00 QKSCFGHPLAPQALEDVKRVVCKNVSGGVQNDRLTLEGFLFLNTLFIQRGRHETTWTILR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 QKSCFGHPLAPQALEDVKRVVCKNVSGGVQNDRLTLEGFLFLNTLFIQRGRHETTWTILR 220 230 240 250 260 270 160 170 180 190 200 210 mFLJ00 RFGYSDSLELTPDYLYPALHVPPGCSTELNHRGYQFVQRMFEKHDQDHDGVLSPTELQNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 RFGYSDSLELTPDYLYPALHVPPGCSTELNHRGYQFVQRMFEKHDQDHDGVLSPTELQNL 280 290 300 310 320 330 220 230 240 250 260 270 mFLJ00 FSVFSGAPWGPELLHTVPTQAGCLPLHGYLCQWTLMTYLDVQQCLAHLGYLGYPTLCEQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 FSVFSGAPWGPELLHTVPTQAGCLPLHGYLCQWTLMTYLDVQQCLAHLGYLGYPTLCEQD 340 350 360 370 380 390 280 290 300 310 320 330 mFLJ00 SQAQAITVTREKKLDQEKGQTQRSVLMCKVLGARGVGKSAFLQAFLGNSLGEARDPPEKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 SQAQAITVTREKKLDQEKGQTQRSVLMCKVLGARGVGKSAFLQAFLGNSLGEARDPPEKF 400 410 420 430 440 450 340 350 360 370 380 390 mFLJ00 PLHTINTVRVNGQEKYLILCEVNADSLLDTSLDTTCDVACLMFDSSDPKTFVHCATIYKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 PLHTINTVRVNGQEKYLILCEVNADSLLDTSLDTTCDVACLMFDSSDPKTFVHCATIYKR 460 470 480 490 500 510 400 410 420 430 440 450 mFLJ00 YYMDGQTPCLFIASKADLPEGVAPPGLSPAEFCRRHRLPAPASFSCLGPAMPSTDVFTQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 YYMDGQTPCLFIASKADLPEGVAPPGLSPAEFCRRHRLPAPASFSCLGPAMPSTDVFTQL 520 530 540 550 560 570 460 470 480 490 mFLJ00 ATMATFPHLVHTELHPTSFWLRGVLVAVGTAVAAVLSFSLYRVLVKSR :::::::::::::::::::::::::::::::::::::::::::::::: gi|819 ATMATFPHLVHTELHPTSFWLRGVLVAVGTAVAAVLSFSLYRVLVKSR 580 590 600 610 620 >>gi|81912643|sp|Q7TSA0.1|MIRO2_RAT RecName: Full=Mitoch (622 aa) initn: 2097 init1: 2097 opt: 3177 Z-score: 3810.0 bits: 714.8 E(): 1.6e-203 Smith-Waterman score: 3177; 93.200% identity (97.600% similar) in 500 aa overlap (1-498:123-622) 10 20 30 mFLJ00 RPGSTMEAVLPIMSQFPEIETCVECSAKHL :::::.:::::::::::::::::::::::: gi|819 IRTKWIPLVNGRTATGPRLPIILVGNKSDLRPGSTIEAVLPIMSQFPEIETCVECSAKHL 100 110 120 130 140 150 40 50 60 70 80 90 mFLJ00 RNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDRDHGLSDEELNAF ::::::::::::::::::::::::::::::::::::::::::::::: ::.:::.::::: gi|819 RNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDLDHALSDKELNAF 160 170 180 190 200 210 100 110 120 130 140 150 mFLJ00 QKSCFGHPLAPQALEDVKRVVCKNVSGGVQNDRLTLEGFLFLNTLFIQRGRHETTWTILR :::::::::::::::::::::::::.::::.::::::::::::::::::::::::::::: gi|819 QKSCFGHPLAPQALEDVKRVVCKNVAGGVQDDRLTLEGFLFLNTLFIQRGRHETTWTILR 220 230 240 250 260 270 160 170 180 190 200 210 mFLJ00 RFGYSDSLELTPDYLYPALHVPPGCSTELNHRGYQFVQRMFEKHDQDHDGVLSPTELQNL ::::::::::::::: : :.:::::::::::::::::::.:::::::::::::::::..: gi|819 RFGYSDSLELTPDYLCPPLYVPPGCSTELNHRGYQFVQRVFEKHDQDHDGVLSPTELESL 280 290 300 310 320 330 220 230 240 250 260 270 mFLJ00 FSVFSGAPWGPELLHTVPTQAGCLPLHGYLCQWTLMTYLDVQQCLAHLGYLGYPTLCEQD ::::: :::::::::::::.:::: :.::::::::.::::::.::::::::::::::::: gi|819 FSVFSVAPWGPELLHTVPTEAGCLSLRGYLCQWTLVTYLDVQHCLAHLGYLGYPTLCEQD 340 350 360 370 380 390 280 290 300 310 320 mFLJ00 SQAQAITVTREKKLDQEKGQTQRSVLMCKVLGARGVGKSAFLQAFLGNSLGEARD--PPE ::::::::::::.::::::::::::::::::::::::::::::::::.::::::: :: gi|819 SQAQAITVTREKRLDQEKGQTQRSVLMCKVLGARGVGKSAFLQAFLGHSLGEARDRDAPE 400 410 420 430 440 450 330 340 350 360 370 380 mFLJ00 KFPLHTINTVRVNGQEKYLILCEVNADSLLDTSLDTTCDVACLMFDSSDPKTFVHCATIY :.: ::::::::.:::::::::::::::::::::::::::::::::::::.:::.::::: gi|819 KLPTHTINTVRVSGQEKYLILCEVNADSLLDTSLDTTCDVACLMFDSSDPETFVQCATIY 460 470 480 490 500 510 390 400 410 420 430 440 mFLJ00 KRYYMDGQTPCLFIASKADLPEGVAPPGLSPAEFCRRHRLPAPASFSCLGPAMPSTDVFT ::::::::::::::.:::::::::::::::::::::::::::::::::::::. : :::: gi|819 KRYYMDGQTPCLFISSKADLPEGVAPPGLSPAEFCRRHRLPAPASFSCLGPAQSSIDVFT 520 530 540 550 560 570 450 460 470 480 490 mFLJ00 QLATMATFPHLVHTELHPTSFWLRGVLVAVGTAVAAVLSFSLYRVLVKSR :::::::::::.::::::: :::::::::::::::::::::::::::::: gi|819 QLATMATFPHLAHTELHPTPFWLRGVLVAVGTAVAAVLSFSLYRVLVKSR 580 590 600 610 620 >>gi|149052153|gb|EDM03970.1| ras homolog gene family, m (626 aa) initn: 1947 init1: 1947 opt: 3159 Z-score: 3788.3 bits: 710.8 E(): 2.6e-202 Smith-Waterman score: 3159; 92.460% identity (96.825% similar) in 504 aa overlap (1-498:123-626) 10 20 mFLJ00 RPGSTMEAVLPIMSQFPEIETCVE----CS :::::.:::::::::::::::::: :: gi|149 IRTKWIPLVNGRTATGPRLPIILVGNKSDLRPGSTIEAVLPIMSQFPEIETCVEVSGECS 100 110 120 130 140 150 30 40 50 60 70 80 mFLJ00 AKHLRNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDRDHGLSDEE ::::::::::::::::::::::::::::::::::::::::::::::::::: ::.:::.: gi|149 AKHLRNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDLDHALSDKE 160 170 180 190 200 210 90 100 110 120 130 140 mFLJ00 LNAFQKSCFGHPLAPQALEDVKRVVCKNVSGGVQNDRLTLEGFLFLNTLFIQRGRHETTW :::::::::::::::::::::::::::::.::::.::::::::::::::::::::::::: gi|149 LNAFQKSCFGHPLAPQALEDVKRVVCKNVAGGVQDDRLTLEGFLFLNTLFIQRGRHETTW 220 230 240 250 260 270 150 160 170 180 190 200 mFLJ00 TILRRFGYSDSLELTPDYLYPALHVPPGCSTELNHRGYQFVQRMFEKHDQDHDGVLSPTE ::::::::::::::::::: : :.:::::::::::::::::::.:::::::::::::::: gi|149 TILRRFGYSDSLELTPDYLCPPLYVPPGCSTELNHRGYQFVQRVFEKHDQDHDGVLSPTE 280 290 300 310 320 330 210 220 230 240 250 260 mFLJ00 LQNLFSVFSGAPWGPELLHTVPTQAGCLPLHGYLCQWTLMTYLDVQQCLAHLGYLGYPTL :..:::::: :::::::::::::.:::: :.::::::::.::::::.::::::::::::: gi|149 LESLFSVFSVAPWGPELLHTVPTEAGCLSLRGYLCQWTLVTYLDVQHCLAHLGYLGYPTL 340 350 360 370 380 390 270 280 290 300 310 320 mFLJ00 CEQDSQAQAITVTREKKLDQEKGQTQRSVLMCKVLGARGVGKSAFLQAFLGNSLGEARD- ::::::::::::::::.::::::::::::::::::::::::::::::::::.::::::: gi|149 CEQDSQAQAITVTREKRLDQEKGQTQRSVLMCKVLGARGVGKSAFLQAFLGHSLGEARDR 400 410 420 430 440 450 330 340 350 360 370 380 mFLJ00 -PPEKFPLHTINTVRVNGQEKYLILCEVNADSLLDTSLDTTCDVACLMFDSSDPKTFVHC :::.: ::::::::.:::::::::::::::::::::::::::::::::::::.:::.: gi|149 DAPEKLPTHTINTVRVSGQEKYLILCEVNADSLLDTSLDTTCDVACLMFDSSDPETFVQC 460 470 480 490 500 510 390 400 410 420 430 440 mFLJ00 ATIYKRYYMDGQTPCLFIASKADLPEGVAPPGLSPAEFCRRHRLPAPASFSCLGPAMPST ::::::::::::::::::.:::::::::::::::::::::::::::::::::::::. : gi|149 ATIYKRYYMDGQTPCLFISSKADLPEGVAPPGLSPAEFCRRHRLPAPASFSCLGPAQSSI 520 530 540 550 560 570 450 460 470 480 490 mFLJ00 DVFTQLATMATFPHLVHTELHPTSFWLRGVLVAVGTAVAAVLSFSLYRVLVKSR :::::::::::::::.::::::: :::::::::::::::::::::::::::::: gi|149 DVFTQLATMATFPHLAHTELHPTPFWLRGVLVAVGTAVAAVLSFSLYRVLVKSR 580 590 600 610 620 >>gi|14336708|gb|AAK61240.1|AE006464_8 similar to AK0019 (615 aa) initn: 2531 init1: 1639 opt: 2836 Z-score: 3400.7 bits: 639.1 E(): 1e-180 Smith-Waterman score: 2836; 82.932% identity (94.578% similar) in 498 aa overlap (1-498:122-615) 10 20 30 mFLJ00 RPGSTMEAVLPIMSQFPEIETCVECSAKHL : ::.:::::::::::::::::::::::.: gi|143 IRTKWIPLVNGGTTQGPRVPIILVGNKSDLRSGSSMEAVLPIMSQFPEIETCVECSAKNL 100 110 120 130 140 150 40 50 60 70 80 90 mFLJ00 RNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDRDHGLSDEELNAF ::::::::::::::::::::::::::::::::::::::::::::::: :..::::::::: gi|143 RNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDLDQALSDEELNAF 160 170 180 190 200 210 100 110 120 130 140 150 mFLJ00 QKSCFGHPLAPQALEDVKRVVCKNVSGGVQNDRLTLEGFLFLNTLFIQRGRHETTWTILR :::::::::::::::::: :::.::.:::..:::::.::::::::::::::::::::::: gi|143 QKSCFGHPLAPQALEDVKTVVCRNVAGGVREDRLTLDGFLFLNTLFIQRGRHETTWTILR 220 230 240 250 260 270 160 170 180 190 200 210 mFLJ00 RFGYSDSLELTPDYLYPALHVPPGCSTELNHRGYQFVQRMFEKHDQDHDGVLSPTELQNL ::::::.:::: ::: : .:::::::::::: :::::::.:::::::.::.:::.:::.: gi|143 RFGYSDALELTADYLSPLIHVPPGCSTELNHLGYQFVQRVFEKHDQDRDGALSPVELQSL 280 290 300 310 320 330 220 230 240 250 260 270 mFLJ00 FSVFSGAPWGPELLHTVPTQAGCLPLHGYLCQWTLMTYLDVQQCLAHLGYLGYPTLCEQD :::: .::::::: .:: :.:: ::::::::::::.:::::..::.:::::::::::::: gi|143 FSVFPAAPWGPELPRTVRTEAGRLPLHGYLCQWTLVTYLDVRSCLGHLGYLGYPTLCEQD 340 350 360 370 380 390 280 290 300 310 320 330 mFLJ00 SQAQAITVTREKKLDQEKGQTQRSVLMCKVLGARGVGKSAFLQAFLGNSLGEARDPPEKF ::.::::::::.:::::::::::::.:::.:::::::::::::::: .::..:. : gi|143 -QAHAITVTREKRLDQEKGQTQRSVLLCKVVGARGVGKSAFLQAFLGRGLGDTREQP--- 400 410 420 430 440 340 350 360 370 380 390 mFLJ00 PLHTINTVRVNGQEKYLILCEVNADSLLDTSLDTTCDVACLMFDSSDPKTFVHCATIYKR : ..:.::.:::::::::::::..:.:: ::::.::::::::::.::::.:.:::..::. gi|143 PGYAIDTVQVNGQEKYLILCEVGTDGLLATSLDATCDVACLMFDGSDPKSFAHCASVYKH 450 460 470 480 490 500 400 410 420 430 440 450 mFLJ00 YYMDGQTPCLFIASKADLPEGVAPPGLSPAEFCRRHRLPAPASFSCLGPAMPSTDVFTQL .::::::::::..:::::::::: : :::::::.::::::. ::: ::: ::: .:::: gi|143 HYMDGQTPCLFVSSKADLPEGVAVSGPSPAEFCRKHRLPAPVPFSCAGPAEPSTTIFTQL 510 520 530 540 550 560 460 470 480 490 mFLJ00 ATMATFPHLVHTELHPTSFWLRGVLVAVGTAVAAVLSFSLYRVLVKSR ::::.::::::.::::.::::::.: .::.:::::::::::::::::. gi|143 ATMAAFPHLVHAELHPSSFWLRGLLGVVGAAVAAVLSFSLYRVLVKSQ 570 580 590 600 610 >>gi|108860798|sp|Q8IXI1.2|MIRO2_HUMAN RecName: Full=Mit (618 aa) initn: 2531 init1: 1639 opt: 2829 Z-score: 3392.3 bits: 637.5 E(): 3e-180 Smith-Waterman score: 2829; 82.932% identity (94.578% similar) in 498 aa overlap (1-498:123-618) 10 20 30 mFLJ00 RPGSTMEAVLPIMSQFPEIETCVECSAKHL : ::.:::::::::::::::::::::::.: gi|108 IRTKWIPLVNGGTTQGPRVPIILVGNKSDLRSGSSMEAVLPIMSQFPEIETCVECSAKNL 100 110 120 130 140 150 40 50 60 70 80 90 mFLJ00 RNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDRDHGLSDEELNAF ::::::::::::::::::::::::::::::::::::::::::::::: :..::::::::: gi|108 RNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDLDQALSDEELNAF 160 170 180 190 200 210 100 110 120 130 140 150 mFLJ00 QKSCFGHPLAPQALEDVKRVVCKNVSGGVQNDRLTLEGFLFLNTLFIQRGRHETTWTILR :::::::::::::::::: :::.::.:::..:::::.::::::::::::::::::::::: gi|108 QKSCFGHPLAPQALEDVKTVVCRNVAGGVREDRLTLDGFLFLNTLFIQRGRHETTWTILR 220 230 240 250 260 270 160 170 180 190 200 210 mFLJ00 RFGYSDSLELTPDYLYPALHVPPGCSTELNHRGYQFVQRMFEKHDQDHDGVLSPTELQNL ::::::.:::: ::: : .:::::::::::: :::::::.:::::::.::.:::.:::.: gi|108 RFGYSDALELTADYLSPLIHVPPGCSTELNHLGYQFVQRVFEKHDQDRDGALSPVELQSL 280 290 300 310 320 330 220 230 240 250 260 270 mFLJ00 FSVFSGAPWGPELLHTVPTQAGCLPLHGYLCQWTLMTYLDVQQCLAHLGYLGYPTLCEQD :::: .::::::: .:: :.:: ::::::::::::.:::::..::.:::::::::::::: gi|108 FSVFPAAPWGPELPRTVRTEAGRLPLHGYLCQWTLVTYLDVRSCLGHLGYLGYPTLCEQD 340 350 360 370 380 390 280 290 300 310 320 330 mFLJ00 SQAQAITVTREKKLDQEKGQTQRSVLMCKVLGARGVGKSAFLQAFLGNSLGEARDPPEKF ::.::::::::.:::::::::::::.:::.:::::::::::::::: .::. .: :. gi|108 -QAHAITVTREKRLDQEKGQTQRSVLLCKVVGARGVGKSAFLQAFLGRGLGH-QDTREQP 400 410 420 430 440 450 340 350 360 370 380 390 mFLJ00 PLHTINTVRVNGQEKYLILCEVNADSLLDTSLDTTCDVACLMFDSSDPKTFVHCATIYKR : ..:.::.:::::::::::::..:.:: ::::.::::::::::.::::.:.:::..::. gi|108 PGYAIDTVQVNGQEKYLILCEVGTDGLLATSLDATCDVACLMFDGSDPKSFAHCASVYKH 460 470 480 490 500 510 400 410 420 430 440 450 mFLJ00 YYMDGQTPCLFIASKADLPEGVAPPGLSPAEFCRRHRLPAPASFSCLGPAMPSTDVFTQL .::::::::::..:::::::::: : :::::::.::::::. ::: ::: ::: .:::: gi|108 HYMDGQTPCLFVSSKADLPEGVAVSGPSPAEFCRKHRLPAPVPFSCAGPAEPSTTIFTQL 520 530 540 550 560 570 460 470 480 490 mFLJ00 ATMATFPHLVHTELHPTSFWLRGVLVAVGTAVAAVLSFSLYRVLVKSR ::::.::::::.::::.::::::.: .::.:::::::::::::::::. gi|108 ATMAAFPHLVHAELHPSSFWLRGLLGVVGAAVAAVLSFSLYRVLVKSQ 580 590 600 610 >>gi|25187967|emb|CAD56957.1| mitochondrial Rho 2 [Homo (618 aa) initn: 2514 init1: 1622 opt: 2801 Z-score: 3358.7 bits: 631.3 E(): 2.3e-178 Smith-Waterman score: 2801; 82.329% identity (94.177% similar) in 498 aa overlap (1-498:123-618) 10 20 30 mFLJ00 RPGSTMEAVLPIMSQFPEIETCVECSAKHL : ::.::::::::::: :::::::::::.: gi|251 IRTKWIPLVNGGTTQGPRVPIILVGNKSDLRSGSSMEAVLPIMSQFSEIETCVECSAKNL 100 110 120 130 140 150 40 50 60 70 80 90 mFLJ00 RNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDRDHGLSDEELNAF ::::::::::::::::::::::::::::::::::::::::::::::: :..::::::::: gi|251 RNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDLDQALSDEELNAF 160 170 180 190 200 210 100 110 120 130 140 150 mFLJ00 QKSCFGHPLAPQALEDVKRVVCKNVSGGVQNDRLTLEGFLFLNTLFIQRGRHETTWTILR :::::::::::::::::: :::.::.:::..:.:::.::::::::::::::::::::::: gi|251 QKSCFGHPLAPQALEDVKTVVCRNVAGGVREDQLTLDGFLFLNTLFIQRGRHETTWTILR 220 230 240 250 260 270 160 170 180 190 200 210 mFLJ00 RFGYSDSLELTPDYLYPALHVPPGCSTELNHRGYQFVQRMFEKHDQDHDGVLSPTELQNL ::::::.:::: ::: : .:::::::::::: :::::::.:::::::.::.:::.:::.: gi|251 RFGYSDALELTADYLSPLIHVPPGCSTELNHLGYQFVQRVFEKHDQDRDGALSPVELQSL 280 290 300 310 320 330 220 230 240 250 260 270 mFLJ00 FSVFSGAPWGPELLHTVPTQAGCLPLHGYLCQWTLMTYLDVQQCLAHLGYLGYPTLCEQD :::: .::::::: .:: :.:: ::::::::::::.:::::..::.:::::::::::::: gi|251 FSVFPAAPWGPELPRTVRTEAGRLPLHGYLCQWTLVTYLDVRSCLGHLGYLGYPTLCEQD 340 350 360 370 380 390 280 290 300 310 320 330 mFLJ00 SQAQAITVTREKKLDQEKGQTQRSVLMCKVLGARGVGKSAFLQAFLGNSLGEARDPPEKF ::.::::::::.:::::::::::::.:::.:: ::::::::::::: .::. .: :. gi|251 -QAHAITVTREKRLDQEKGQTQRSVLLCKVVGACGVGKSAFLQAFLGRGLGH-QDTREQP 400 410 420 430 440 450 340 350 360 370 380 390 mFLJ00 PLHTINTVRVNGQEKYLILCEVNADSLLDTSLDTTCDVACLMFDSSDPKTFVHCATIYKR : ..:.::.:::::::::::::..:.:: ::::.::::::::::.::::.:.:::..::. gi|251 PGYAIDTVQVNGQEKYLILCEVGTDGLLATSLDATCDVACLMFDGSDPKSFAHCASVYKH 460 470 480 490 500 510 400 410 420 430 440 450 mFLJ00 YYMDGQTPCLFIASKADLPEGVAPPGLSPAEFCRRHRLPAPASFSCLGPAMPSTDVFTQL .::::::::::..:::::::::: : :::::::.::::::. ::: ::: ::: .:::: gi|251 HYMDGQTPCLFVSSKADLPEGVAVSGPSPAEFCRKHRLPAPVPFSCAGPAEPSTTIFTQL 520 530 540 550 560 570 460 470 480 490 mFLJ00 ATMATFPHLVHTELHPTSFWLRGVLVAVGTAVAAVLSFSLYRVLVKSR ::::.::::::.::::.::::::.: .::.:::::::::::::::::. gi|251 ATMAAFPHLVHAELHPSSFWLRGLLGVVGAAVAAVLSFSLYRVLVKSQ 580 590 600 610 >>gi|194219430|ref|XP_001497143.2| PREDICTED: ras homolo (621 aa) initn: 2754 init1: 1888 opt: 2753 Z-score: 3301.0 bits: 620.6 E(): 3.7e-175 Smith-Waterman score: 2753; 79.200% identity (93.200% similar) in 500 aa overlap (1-498:122-621) 10 20 30 mFLJ00 RPGSTMEAVLPIMSQFPEIETCVECSAKHL ::::.:::::::::.:::::::::::::.: gi|194 KIRTKWIPLVNGETEKPRVPIILVGNKSDLRPGSSMEAVLPIMSEFPEIETCVECSAKNL 100 110 120 130 140 150 40 50 60 70 80 90 mFLJ00 RNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDRDHGLSDEELNAF ::::::::::::::::::::::::.: ::::::.::::::::::::: :..::::::::: gi|194 RNISELFYYAQKAVLHPTAPLYDPRAPQLRPACTQALTRIFRLSDQDLDQALSDEELNAF 160 170 180 190 200 210 100 110 120 130 140 150 mFLJ00 QKSCFGHPLAPQALEDVKRVVCKNVSGGVQNDRLTLEGFLFLNTLFIQRGRHETTWTILR :::::::::::::::::: ::::::.:::..:::::.:::::::::.::::::::::.:: gi|194 QKSCFGHPLAPQALEDVKMVVCKNVAGGVRDDRLTLDGFLFLNTLFVQRGRHETTWTVLR 220 230 240 250 260 270 160 170 180 190 200 210 mFLJ00 RFGYSDSLELTPDYLYPALHVPPGCSTELNHRGYQFVQRMFEKHDQDHDGVLSPTELQNL ::::.:.:::: :::.: ::::::::::::: :::::::.::::::: ::.:: .:::.. gi|194 RFGYGDTLELTDDYLFPPLHVPPGCSTELNHFGYQFVQRLFEKHDQDCDGALSSAELQSF 280 290 300 310 320 330 220 230 240 250 260 270 mFLJ00 FSVFSGAPWGPELLHTVPTQAGCLPLHGYLCQWTLMTYLDVQQCLAHLGYLGYPTLCEQD :::: .:::::.: .:: :.:: : ::::::::::..::::..:: ::::::::.::::: gi|194 FSVFPAAPWGPQLPQTVRTEAGRLSLHGYLCQWTLVAYLDVRRCLEHLGYLGYPVLCEQD 340 350 360 370 380 390 280 290 300 310 320 mFLJ00 SQAQAITVTREKKLDQEKGQTQRSVLMCKVLGARGVGKSAFLQAFLGNSLG--EARDPPE :::.:::::::::::::::::::.::.:::.:::::::::::::::: ::: .. ::: gi|194 SQAHAITVTREKKLDQEKGQTQRNVLLCKVVGARGVGKSAFLQAFLGRSLGHQDTTAPPE 400 410 420 430 440 450 330 340 350 360 370 380 mFLJ00 KFPLHTINTVRVNGQEKYLILCEVNADSLLDTSLDTTCDVACLMFDSSDPKTFVHCATIY . ..:.::.:.:::::::::::..:::::.. :..:::::::::.::: .:. ::..: gi|194 EPATYAIDTVQVHGQEKYLILCEVGTDSLLDAAPDAACDVACLMFDGSDPASFALCASVY 460 470 480 490 500 510 390 400 410 420 430 440 mFLJ00 KRYYMDGQTPCLFIASKADLPEGVAPPGLSPAEFCRRHRLPAPASFSCLGPAMPSTDVFT ::.::::::::: ..:::::::::.::::.:::::::::::::. :::.::: ::. ::: gi|194 KRHYMDGQTPCLVVSSKADLPEGVSPPGLAPAEFCRRHRLPAPTPFSCMGPARPSSAVFT 520 530 540 550 560 570 450 460 470 480 490 mFLJ00 QLATMATFPHLVHTELHPTSFWLRGVLVAVGTAVAAVLSFSLYRVLVKSR .::.::.::::. ::: .::::: .: :::.:.::.::::::::::::: gi|194 RLAAMAAFPHLAPGELHTSSFWLRVTLGAVGAALAALLSFSLYRVLVKSR 580 590 600 610 620 >>gi|114660196|ref|XP_001155477.1| PREDICTED: ras homolo (509 aa) initn: 2709 init1: 1859 opt: 2732 Z-score: 3277.0 bits: 615.9 E(): 8e-174 Smith-Waterman score: 2732; 80.924% identity (93.173% similar) in 498 aa overlap (1-498:16-509) 10 20 30 40 mFLJ00 RPGSTMEAVLPIMSQFPEIETCVECSAKHLRNISELFYYAQKAVL : ::.:::::::::::::::::::::::.:::::::::::::::: gi|114 MGGPRGGPVGNKSDLRSGSSMEAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVL 10 20 30 40 50 60 50 60 70 80 90 100 mFLJ00 HPTAPLYDPEAKQLRPACAQALTRIFRLSDQDRDHGLSDEELNAFQKSCFGHPLAPQALE :::::::::::::::::::::::::::::::: :..:::::::::::::::::::::::: gi|114 HPTAPLYDPEAKQLRPACAQALTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALE 70 80 90 100 110 120 110 120 130 140 150 160 mFLJ00 DVKRVVCKNVSGGVQNDRLTLEGFLFLNTLFIQRGRHETTWTILRRFGYSDSLELTPDYL ::: :::.::.:::..:::::. ::::::::::::: .. :: :::::::.:::: ::: gi|114 DVKTVVCRNVAGGVREDRLTLDEFLFLNTLFIQRGRXXXXXTIXRRFGYSDALELTADYL 130 140 150 160 170 180 170 180 190 200 210 220 mFLJ00 YPALHVPPGCSTELNHRGYQFVQRMFEKHDQDHDGVLSPTELQNLFSVFSGAPWGPELLH : :.::::::::::: :::::::.:::::::.::.:::.:::.::::: .::::::: . gi|114 SPPLRVPPGCSTELNHLGYQFVQRVFEKHDQDRDGALSPVELQSLFSVFPAAPWGPELPR 190 200 210 220 230 240 230 240 250 260 270 280 mFLJ00 TVPTQAGCLPLHGYLCQWTLMTYLDVQQCLAHLGYLGYPTLCEQDSQAQAITVTREKKLD :: :.:: ::::::::::::.:::::..::.:::::::::::::::::.::::::::.:: gi|114 TVRTEAGRLPLHGYLCQWTLVTYLDVRSCLGHLGYLGYPTLCEQDSQAHAITVTREKRLD 250 260 270 280 290 300 290 300 310 320 330 340 mFLJ00 QEKGQTQRSVLMCKVLGARGVGKSAFLQAFLGNSLGEARDPPEKFPLHTINTVRVNGQEK :::::::::::.:::.:::::::::::::::: .::. .: :. : ..:.::.:::::: gi|114 QEKGQTQRSVLLCKVVGARGVGKSAFLQAFLGRGLGH-QDTREQPPGYAIDTVQVNGQEK 310 320 330 340 350 350 360 370 380 390 400 mFLJ00 YLILCEVNADSLLDTSLDTTCDVACLMFDSSDPKTFVHCATIYKRYYMDGQTPCLFIASK ::: :..:.:: ::::.::::::::::.::::.:.:::..::..::::::::::..:: gi|114 YLI---VGTDGLLATSLDATCDVACLMFDGSDPKSFAHCASVYKHHYMDGQTPCLFVSSK 360 370 380 390 400 410 410 420 430 440 450 460 mFLJ00 ADLPEGVAPPGLSPAEFCRRHRLPAPASFSCLGPAMPSTDVFTQLATMATFPHLVHTELH :::::::. : :::::::.::::::. ::: ::: ::: .::::::::.::::::.::: gi|114 ADLPEGVVVSGPSPAEFCRKHRLPAPVPFSCAGPAKPSTTIFTQLATMAAFPHLVHAELH 420 430 440 450 460 470 470 480 490 mFLJ00 PTSFWLRGVLVAVGTAVAAVLSFSLYRVLVKSR :.::::::.: .::.:::::::::::::::::. gi|114 PSSFWLRGLLGVVGAAVAAVLSFSLYRVLVKSQ 480 490 500 >>gi|114660194|ref|XP_001155839.1| PREDICTED: ras homolo (598 aa) initn: 2709 init1: 1859 opt: 2732 Z-score: 3276.1 bits: 615.9 E(): 9e-174 Smith-Waterman score: 2732; 80.924% identity (93.173% similar) in 498 aa overlap (1-498:105-598) 10 20 30 mFLJ00 RPGSTMEAVLPIMSQFPEIETCVECSAKHL : ::.:::::::::::::::::::::::.: gi|114 IRTKWIPLVNGGTTRGPRVPIILVGNKSDLRSGSSMEAVLPIMSQFPEIETCVECSAKNL 80 90 100 110 120 130 40 50 60 70 80 90 mFLJ00 RNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDRDHGLSDEELNAF ::::::::::::::::::::::::::::::::::::::::::::::: :..::::::::: gi|114 RNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDLDQALSDEELNAF 140 150 160 170 180 190 100 110 120 130 140 150 mFLJ00 QKSCFGHPLAPQALEDVKRVVCKNVSGGVQNDRLTLEGFLFLNTLFIQRGRHETTWTILR :::::::::::::::::: :::.::.:::..:::::. ::::::::::::: .. :: : gi|114 QKSCFGHPLAPQALEDVKTVVCRNVAGGVREDRLTLDEFLFLNTLFIQRGRXXXXXTIXR 200 210 220 230 240 250 160 170 180 190 200 210 mFLJ00 RFGYSDSLELTPDYLYPALHVPPGCSTELNHRGYQFVQRMFEKHDQDHDGVLSPTELQNL ::::::.:::: ::: : :.::::::::::: :::::::.:::::::.::.:::.:::.: gi|114 RFGYSDALELTADYLSPPLRVPPGCSTELNHLGYQFVQRVFEKHDQDRDGALSPVELQSL 260 270 280 290 300 310 220 230 240 250 260 270 mFLJ00 FSVFSGAPWGPELLHTVPTQAGCLPLHGYLCQWTLMTYLDVQQCLAHLGYLGYPTLCEQD :::: .::::::: .:: :.:: ::::::::::::.:::::..::.:::::::::::::: gi|114 FSVFPAAPWGPELPRTVRTEAGRLPLHGYLCQWTLVTYLDVRSCLGHLGYLGYPTLCEQD 320 330 340 350 360 370 280 290 300 310 320 330 mFLJ00 SQAQAITVTREKKLDQEKGQTQRSVLMCKVLGARGVGKSAFLQAFLGNSLGEARDPPEKF :::.::::::::.:::::::::::::.:::.:::::::::::::::: .::. .: :. gi|114 SQAHAITVTREKRLDQEKGQTQRSVLLCKVVGARGVGKSAFLQAFLGRGLGH-QDTREQP 380 390 400 410 420 430 340 350 360 370 380 390 mFLJ00 PLHTINTVRVNGQEKYLILCEVNADSLLDTSLDTTCDVACLMFDSSDPKTFVHCATIYKR : ..:.::.::::::::: :..:.:: ::::.::::::::::.::::.:.:::..::. gi|114 PGYAIDTVQVNGQEKYLI---VGTDGLLATSLDATCDVACLMFDGSDPKSFAHCASVYKH 440 450 460 470 480 490 400 410 420 430 440 450 mFLJ00 YYMDGQTPCLFIASKADLPEGVAPPGLSPAEFCRRHRLPAPASFSCLGPAMPSTDVFTQL .::::::::::..:::::::::. : :::::::.::::::. ::: ::: ::: .:::: gi|114 HYMDGQTPCLFVSSKADLPEGVVVSGPSPAEFCRKHRLPAPVPFSCAGPAKPSTTIFTQL 500 510 520 530 540 550 460 470 480 490 mFLJ00 ATMATFPHLVHTELHPTSFWLRGVLVAVGTAVAAVLSFSLYRVLVKSR ::::.::::::.::::.::::::.: .::.:::::::::::::::::. gi|114 ATMAAFPHLVHAELHPSSFWLRGLLGVVGAAVAAVLSFSLYRVLVKSQ 560 570 580 590 >>gi|114660192|ref|XP_510715.2| PREDICTED: ras homolog g (616 aa) initn: 2709 init1: 1859 opt: 2732 Z-score: 3275.9 bits: 616.0 E(): 9.2e-174 Smith-Waterman score: 2732; 80.924% identity (93.173% similar) in 498 aa overlap (1-498:123-616) 10 20 30 mFLJ00 RPGSTMEAVLPIMSQFPEIETCVECSAKHL : ::.:::::::::::::::::::::::.: gi|114 IRTKWIPLVNGGTTRGPRVPIILVGNKSDLRSGSSMEAVLPIMSQFPEIETCVECSAKNL 100 110 120 130 140 150 40 50 60 70 80 90 mFLJ00 RNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDRDHGLSDEELNAF ::::::::::::::::::::::::::::::::::::::::::::::: :..::::::::: gi|114 RNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDLDQALSDEELNAF 160 170 180 190 200 210 100 110 120 130 140 150 mFLJ00 QKSCFGHPLAPQALEDVKRVVCKNVSGGVQNDRLTLEGFLFLNTLFIQRGRHETTWTILR :::::::::::::::::: :::.::.:::..:::::. ::::::::::::: .. :: : gi|114 QKSCFGHPLAPQALEDVKTVVCRNVAGGVREDRLTLDEFLFLNTLFIQRGRXXXXXTIXR 220 230 240 250 260 270 160 170 180 190 200 210 mFLJ00 RFGYSDSLELTPDYLYPALHVPPGCSTELNHRGYQFVQRMFEKHDQDHDGVLSPTELQNL ::::::.:::: ::: : :.::::::::::: :::::::.:::::::.::.:::.:::.: gi|114 RFGYSDALELTADYLSPPLRVPPGCSTELNHLGYQFVQRVFEKHDQDRDGALSPVELQSL 280 290 300 310 320 330 220 230 240 250 260 270 mFLJ00 FSVFSGAPWGPELLHTVPTQAGCLPLHGYLCQWTLMTYLDVQQCLAHLGYLGYPTLCEQD :::: .::::::: .:: :.:: ::::::::::::.:::::..::.:::::::::::::: gi|114 FSVFPAAPWGPELPRTVRTEAGRLPLHGYLCQWTLVTYLDVRSCLGHLGYLGYPTLCEQD 340 350 360 370 380 390 280 290 300 310 320 330 mFLJ00 SQAQAITVTREKKLDQEKGQTQRSVLMCKVLGARGVGKSAFLQAFLGNSLGEARDPPEKF :::.::::::::.:::::::::::::.:::.:::::::::::::::: .::. .: :. gi|114 SQAHAITVTREKRLDQEKGQTQRSVLLCKVVGARGVGKSAFLQAFLGRGLGH-QDTREQP 400 410 420 430 440 450 340 350 360 370 380 390 mFLJ00 PLHTINTVRVNGQEKYLILCEVNADSLLDTSLDTTCDVACLMFDSSDPKTFVHCATIYKR : ..:.::.::::::::: :..:.:: ::::.::::::::::.::::.:.:::..::. gi|114 PGYAIDTVQVNGQEKYLI---VGTDGLLATSLDATCDVACLMFDGSDPKSFAHCASVYKH 460 470 480 490 500 400 410 420 430 440 450 mFLJ00 YYMDGQTPCLFIASKADLPEGVAPPGLSPAEFCRRHRLPAPASFSCLGPAMPSTDVFTQL .::::::::::..:::::::::. : :::::::.::::::. ::: ::: ::: .:::: gi|114 HYMDGQTPCLFVSSKADLPEGVVVSGPSPAEFCRKHRLPAPVPFSCAGPAKPSTTIFTQL 510 520 530 540 550 560 460 470 480 490 mFLJ00 ATMATFPHLVHTELHPTSFWLRGVLVAVGTAVAAVLSFSLYRVLVKSR ::::.::::::.::::.::::::.: .::.:::::::::::::::::. gi|114 ATMAAFPHLVHAELHPSSFWLRGLLGVVGAAVAAVLSFSLYRVLVKSQ 570 580 590 600 610 498 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 14:00:11 2009 done: Thu Mar 12 14:07:09 2009 Total Scan time: 939.100 Total Display time: 0.160 Function used was FASTA [version 34.26.5 April 26, 2007]