FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mFLJ00256.ptfa, 1000 aa vs ./tmplib.26680 library 1768017 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.6565+/-0.0043; mu= 18.3185+/- 0.289 mean_var=96.4032+/-21.196, 0's: 0 Z-trim: 5 B-trim: 0 in 0/36 Lambda= 0.1306 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1027 ( 2564 res) mia05043 (2564) 229 55 1.6e-07 mKIAA1200 ( 1447 res) mbg09531 (1447) 201 49 4.4e-06 mKIAA1688 ( 1088 res) mfj01567 (1088) 144 38 0.0063 >>mKIAA1027 ( 2564 res) mia05043 (2564 aa) initn: 68 init1: 68 opt: 229 Z-score: 227.4 bits: 54.9 E(): 1.6e-07 Smith-Waterman score: 236; 21.515% identity (23.826% ungapped) in 330 aa overlap (686-992:112-432) 660 670 680 690 700 710 mFLJ00 HRVLRVGPRKQPPHDVEVKAAEQNVSKLHHEVYLPNDTSKSMEVGSSSRVRDLCEGIGTR .. . . : :.. : .:. : :. : .: mKIAA1 GIWLEAGKALDYYMLRNGDTMEYRKKQRPLKIRMLDGTVKTIMVDDSKTVTDMLMTICAR 90 100 110 120 130 140 720 730 740 750 mFLJ00 LQLASWDGCSLFIKITDKVISLKEGDFFFDS-----------LRQ---VSD---WVKKNR . ... : :: .. .. . : . :. :.: ..: :. ..: mKIAA1 IGITNHDEYSLVRELMEEKKDEGTGTLRKDKTLLRDEKKMEKLKQKLHTDDELNWLDHGR 150 160 170 180 190 200 760 770 780 790 800 810 mFLJ00 PQKEGASVTLPYQVFFMRKLWLNVTPGKDVNADTI---LHYHQELPKYLRGFHKCSREDA .: . . ......:. .. . : . : . : : : : : : : . : mKIAA1 TLREQG--VEEHETLLLRRKFFYSDQNVD-SRDPVQLNLLYVQARDDILNGSHPVSFDKA 210 220 230 240 250 820 830 840 850 860 870 mFLJ00 IHLGGLICKIQFGSDSSQLASVSKV-LKELVPQNLTRLMSSEEWKKSLLLECDKN-KRKT ...:. :.:::: . : ... . ::...:.. .. . .. ... :: . . mKIAA1 CEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERK-----IFQAHKNCGQMS 260 270 280 290 300 310 880 890 900 910 920 930 mFLJ00 VAEAKVEFLKYMYRWPTFGSAFFEVKQTSEPSYPDI-LLIAINRHGLLLIHPKTKELLNT ::::...: :.: .:: ::. . . . :..:... .. . ::::... mKIAA1 EIEAKVRYVKLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQE 320 330 340 350 360 370 940 950 960 970 980 990 mFLJ00 YPFTKISSWSSGNTYFHMALGSLGQGSRLLCETSLGYKMDDLLTSYVQQLLNTVNKQRGF . .:.:. :... : . .:. .: . .:. : .. .:...:.. .:. ... : mKIAA1 WSLTNIKRWAASPKSFTLDFGDYQDGYYSV-QTTEGEQIAQLIAGYIDIILKKKKSKDHF 380 390 400 410 420 430 1000 mFLJ00 RAPAPANP mKIAA1 GLEGDEESTMLEDSVSPKKSTVLQQQYNRVGKVEHGSVALPAIMRSGASGPENFQVGSMP 440 450 460 470 480 490 >>mKIAA1200 ( 1447 res) mbg09531 (1447 aa) initn: 185 init1: 70 opt: 201 Z-score: 201.5 bits: 49.3 E(): 4.4e-06 Smith-Waterman score: 329; 21.486% identity (24.541% ungapped) in 498 aa overlap (551-1000:944-1427) 530 540 550 560 570 580 mFLJ00 SRGHLWAYSPEPLRQPLLKSVHDKAKLRDAACQIFLAILKYTGDYPSRQSWHSLELTDQM .::.:. . ... ..: . :.. mKIAA1 MLCYSQEGLCASLTTLPSEALQTEALKLFKSCQLFINVPVEAASV----DYH-VSLAQTA 920 930 940 950 960 590 600 610 620 630 mFLJ00 FSLALQDPALQDELYCQILKQLT-HNSIRFSEERAWQLLWLCTGLFPPGKTLL----PHA ... : : ::.:.:::..::.. . ..: . :::: ::. :: : . .: . mKIAA1 LQVCLVHPELQSEIYCQLMKQISCRPPQKYSLMQCWQLLALCAPLFLPQHHFLWYVKQQL 970 980 990 1000 1010 1020 640 650 660 670 680 mFLJ00 QKFIDSRKKK-PLALDCSRRLHRVLRVGPRKQPPHDVEVKAAEQNVSKLHHE------VY :. : :.. :. :.: ..:.:..: :. : .:: . . .:: :. mKIAA1 QRHADPRSETGQYAIYCQRAVERTLQTGEREARPSRMEVVSILLR-NPFHHSLPFSIPVH 1030 1040 1050 1060 1070 1080 690 700 710 720 730 740 mFLJ00 LPNDTSKSMEVGSSSRVRDLCEGIG--TRLQLASWDGCSLFIKITDKVISLKEGDFFFDS . : : . . .:: : .. . .. : .. : .: .:: :: : .. . ... mKIAA1 FANGTYQVVGFDGSSTVDEFLQRLNQETGMRKPSQSGFALF---TDDP-SGRDLEHCLQG 1090 1100 1110 1120 1130 1140 750 760 770 780 790 mFLJ00 LRQVSD----W---VKKNRPQK-EGASVTLPYQVFFMRKLWLNVTPGKDVNADTILHYHQ .. : : .:. .: : ::.. .. .... .:.. ... . .: : mKIAA1 RVKICDAISKWEQTLKELHPGKSEGGTRVV--KLMYKNRLYFRSQVKGETERERLLLAFQ 1150 1160 1170 1180 1190 1200 800 810 820 830 840 mFLJ00 ELPKYLRGFHKCSREDAIHLGGLICKIQFGS---------DSSQLASVSKVLKELVPQNL . . : ..: :.....:. ....:. .. :.....:.... . mKIAA1 ASGEIVAGRFPVTKELALEMAALMAQVEYGDLEKPTLPGPGGTPPAKAQHLLQQVLDRFY 1210 1220 1230 1240 1250 1260 850 860 870 880 890 900 mFLJ00 TRLMSSEEWKKSLLLECDKNKRKTVA-------EAKVEFLKYMYRWPTFGSAFFEVKQTS : . . ..: : : .: : .: .:: ::. .: .. .. mKIAA1 PRRYRNGAPPEQLRHLADMMATKWAALQGCSPPECIRIYLTVARKWPLFGAKLFAAQPAQ 1270 1280 1290 1300 1310 1320 910 920 930 940 950 960 mFLJ00 -EPSYPDILLIAINRHGLLLIHPKTKELLNTYPFTKISSWSSGNTYFHMALGSL-GQGSR :. .. ::.:. :. .. .: .. :::......... : ... :. :.: mKIAA1 LSPKENTVVWIAVNEDGVSILDHRTMQVNITYPYSSVTTFGGCRDDFMLVIRSIPDQSSG 1330 1340 1350 1360 1370 1380 970 980 990 1000 mFLJ00 LLCETSLGYKMDD--------LLTSYVQQLLNTVNKQRGFRAPAPANP .: ..: ...::... ::: . . :: .: mKIAA1 KTRIDKLTFRMPAPKITETTLMMASYMNHCSATVNLSA--KLPAARQPRDLDGQFFASVS 1390 1400 1410 1420 1430 mKIAA1 CTKGSALL 1440 >>mKIAA1688 ( 1088 res) mfj01567 (1088 aa) initn: 234 init1: 144 opt: 144 Z-score: 144.8 bits: 38.4 E(): 0.0063 Smith-Waterman score: 200; 22.222% identity (25.101% ungapped) in 279 aa overlap (424-680:619-887) 400 410 420 430 440 mFLJ00 QDRRATDDITLLPFKKGDLLILTKKQGLLASENWALGQNDRTG-------KTGLVPTACL :..: . :. : :. : : mKIAA1 GYESDGAVPLPMPGPVVRAFSEDEALAQQDSKHWKRSTFDKLGFPQILLEKSVSVQTNLA 590 600 610 620 630 640 450 460 470 480 490 500 mFLJ00 YTIPSVTKPSTQLLSLLAM--SPEKRKLAAQEVRALEPPLEDQLTESPYTLEEFSYQFFR : . ... :. :. : .. . : . : . . : .:... . : mKIAA1 SPEPHLHPSQSEDLGACAQFESSRQNRSAMPSSSCVFPTFTLRKPSSETDIENWASKHFN 650 660 670 680 690 700 510 520 530 540 550 560 mFLJ00 APEKETISRAAMPMARSRGHLWAYSPEPLRQPLLKSVHDKAKLRDAACQIFLAILKYTGD . . : . : ... :.: : ...:.. : . ... ::.:: : : :: mKIAA1 KHTQGLFRRKV-----SIANMLAWSSESIKKPMI--VTSDRHVKKEACEIFKLIQMYMGD 710 720 730 740 750 760 570 580 590 600 610 620 mFLJ00 YPSRQSWHSLELTDQMFSLALQDPALQDELYCQILKQLTHNSIRFSEERAWQLLWLCTGL : . :... .. . . . .:.:::: :. .: :.: : :.:.:. .: .. mKIAA1 R--RAKADPLHVALEIATKGWSAQGLRDELYIQLCRQTTENFRLESLARGWELMAICLAF 770 780 790 800 810 630 640 650 660 670 mFLJ00 FPPGKTLLPHAQKFIDSRKKKPL-----------ALDCSRRLHRVLRVGPRK--QPPHDV ::: . . . .: :. :. : : ..:... .: .: . :. mKIAA1 FPPTPKFHSYLEGYI-YRHMDPVNDTKGVAISTYAKYCYHKLQKAALTGAKKGLKKPNVE 820 830 840 850 860 870 680 690 700 710 720 730 mFLJ00 EVKAAEQNVSKLHHEVYLPNDTSKSMEVGSSSRVRDLCEGIGTRLQLASWDGCSLFIKIT :.. :.. : mKIAA1 EIRHAKNAVFSPSMFGSALQEVMSMQKERYPDRQLPWVQTRLSEEVLALNGDQTEGIFRV 880 890 900 910 920 930 1000 residues in 1 query sequences 1768017 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:08:39 2006 done: Mon Mar 27 10:08:40 2006 Scan time: 1.060 Display time: 0.180 Function used was FASTA [version 3.4t11 Apr 17, 2002]