FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1518.ptfa, 587 aa vs ./tmplib.26680 library 1768430 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 7.9100+/-0.0073; mu= 2.6782+/- 0.488 mean_var=265.1500+/-61.621, 0's: 0 Z-trim: 14 B-trim: 0 in 0/36 Lambda= 0.0788 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0172 ( 934 res) mbh02656 ( 934) 1043 132 2.2e-31 mKIAA1334 ( 992 res) mpm09174 ( 992) 228 39 0.0018 mFLJ00246 ( 1454 res) mpm02140 (1454) 223 39 0.0033 mKIAA0379 ( 377 res) mtj01105 ( 377) 209 37 0.0043 mKIAA1306 ( 1347 res) mbg04314 (1347) 216 38 0.0055 mKIAA1223 ( 600 res) mfj51380 ( 600) 209 37 0.0057 mKIAA1728 ( 1313 res) mbg03474 (1313) 210 37 0.0086 >>mKIAA0172 ( 934 res) mbh02656 (934 aa) initn: 1191 init1: 905 opt: 1043 Z-score: 655.7 bits: 132.0 E(): 2.2e-31 Smith-Waterman score: 1049; 41.966% identity (44.643% ungapped) in 417 aa overlap (180-573:500-914) 150 160 170 180 190 mKIAA1 KISITERSCTGAPRMTEPSSVNPRPAAASVVQPENPVPAAQDTTDKK-------P----T ::: .: :. . :. : : mKIAA0 FQKASLGKTTGNHLEYTCKCGGLRSGGLLNVQPSQPEVEAETAEGKHSRGHEQFPMQGST 470 480 490 500 510 520 200 210 220 230 240 250 mKIAA1 RPAAASQDSQAADG-----AGRASLAT--KRKEDPADPEVNQRNLQFVGVNGGYESPSED : . :.: : : .. .: . :... : . ..::::.:.:::::. : : mKIAA0 LPPVNLTDDQIATGLYVCPNNENTLKSIMKKSDGNKDSNGAKKNLQFIGINGGYETTSSD 530 540 550 560 570 580 260 270 280 290 300 mKIAA1 SSTAENSEHESTENE----GPEPPARVLSPAECPQLRPPGAAVATTSLEGPQLSQESQRV :....: ...: : : . . . : . . ....:: . .. ..: mKIAA0 ESSSDGSSSSESDDECDTIGYPPEEEEEEEEKDHDTRGMAEGHHAVNIEGFKSARVEDEV 590 600 610 620 630 640 310 320 330 340 350 360 mKIAA1 PAPEVASGPDPEE-EIRMDLSPDLISACLALEKYLENPNALTERELKVAYTTVLQEWLRL .:: :. :: . :..:: ..::: :. ...:.::. ..... .:. ..:.:. mKIAA0 QVPECE--PEKEEIRERYELSEKMLSACNLLKYNIKDPKALASKDMRICLNTLQHDWFRV 650 660 670 680 690 700 370 380 390 400 410 420 mKIAA1 ACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVRQLLDSG . ...: : .: ....:.:.: .: :..:.::.::::::::::::.:: .:. :::. mKIAA0 SSQKSAVPAMVGDYIAAFEAVSPDVLRYIINMADGNGNTALHYSVSHSNFQIVKLLLDAD 710 720 730 740 750 760 430 440 450 460 470 480 mKIAA1 VCHVDKLNRAGYSPIMLTALATLKTQDDIETILQLFRLGNVNAKASQAGQTALMLAVSHG ::.::. :.:::.::::.:::..... :.... .:: :.:::::::::::::::::::: mKIAA0 VCNVDHQNKAGYTPIMLAALAAVEAEKDMQVVEELFSCGDVNAKASQAGQTALMLAVSHG 770 780 790 800 810 820 490 500 510 520 530 540 mKIAA1 RVDVVRALLACEADVNIQDEDGSTALMCACEHGHKEITGLLLAVPSCDISLTDRDGSTAL :.:.:..:::: :::::::..:::::::: :::: ::. :::: :.:. : : :::::: mKIAA0 RIDMVKGLLACGADVNIQDDEGSTALMCASEHGHVEIVKLLLAQPGCNGHLEDNDGSTAL 830 840 850 860 870 880 550 560 570 580 mKIAA1 MVALDAGQSEIASMLYSRMNIKCSFAPMSDYESPASSSAEE .::.::...:: .::...:.. . .: mKIAA0 SIALEAGHKDIAVLLYAHLNFSKAQSPSTPRLGRKTSPGPTHRGSFD 890 900 910 920 930 >>mKIAA1334 ( 992 res) mpm09174 (992 aa) initn: 240 init1: 120 opt: 228 Z-score: 154.9 bits: 39.4 E(): 0.0018 Smith-Waterman score: 228; 27.273% identity (28.481% ungapped) in 165 aa overlap (400-564:63-220) 370 380 390 400 410 420 mKIAA1 SDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVRQLLDSGVCH ::.:.::.: ...... .. .. :: mKIAA1 DDRLLQAVENGDAEKVASLLGKKGASATKHDSEGKTAFHLAAAKGHVECLKVMVTHGV-D 40 50 60 70 80 90 430 440 450 460 470 480 mKIAA1 VDKLNRAGYSPIMLTALATLKTQDDIETILQLFRLGNVNAKASQAGQTALMLAVSHGRVD : . .:.: . ..: . : : .:.. . . ...:.::: :...: .. mKIAA1 VTAQDSSGHSALHVAA-----KNGHPECIRKLLQYKSPAENIDNSGKTALHYAAAQGCLQ 100 110 120 130 140 490 500 510 520 530 540 mKIAA1 VVRALLACEADVNIQDEDGSTALMCACEHGHKEITGLLLAVPSCDISLTDRDGSTALMVA .:. : .. .:..: ::. :. : ..::.: .:: . :.. :..: ::::.: mKIAA1 AVQLLCEHKSPINLKDLDGNIPLLVAVQNGHSEACHFLLD-HGADVNSRDKNGRTALMLA 150 160 170 180 190 200 550 560 570 580 mKIAA1 LDAGQSEIASMLYSRMNIKCSFAPMSDYESPASSSAEE ..:.:. .. : .. mKIAA1 CETGSSNTVDALIKKGADLSLVDSLGHNALHYSKLSENAGIQNLLLSKISQDADLKTPTK 210 220 230 240 250 260 >>mFLJ00246 ( 1454 res) mpm02140 (1454 aa) initn: 259 init1: 147 opt: 223 Z-score: 149.9 bits: 39.0 E(): 0.0033 Smith-Waterman score: 242; 31.429% identity (32.934% ungapped) in 175 aa overlap (391-564:295-462) 370 380 390 400 410 420 mKIAA1 QEWLRLACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVR : : :: ...::::: :. . . . .:. mFLJ00 NVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQSATGNTALTYACAGGFIDIVK 270 280 290 300 310 320 430 440 450 460 470 mKIAA1 QLLDSGVCHVDKLNRAGYSPIMLTALATLKTQDDIETILQLFRLG-NVNAKASQAGQTAL ::. :. ... :. :..:.: .: : .:. :. : ..:..... ..:: mFLJ00 VLLNEGA-NIEDHNENGHTPLMEAASA-----GHVEVARVLLDHGAGINTHSNEFKESAL 330 340 350 360 370 480 490 500 510 520 530 mKIAA1 MLAVSHGRVDVVRALLACEADVNIQDEDGSTALMCACEHGHKEITGLLLAVPSCDISLTD :: .:..:.:: :: :: . . .. :::: :: :: :.. ::: . .... mFLJ00 TLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLD-SGAQVNMPA 380 390 400 410 420 430 540 550 560 570 580 mKIAA1 RDGSTALMVALDAGQSEIASMLYSRMNIKCSFAPMSDYESPASSSAEE . . : .: .:. :.:..: : mFLJ00 DSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAREGHEEMVALLLAQGA 440 450 460 470 480 490 >>mKIAA0379 ( 377 res) mtj01105 (377 aa) initn: 136 init1: 81 opt: 209 Z-score: 147.9 bits: 36.7 E(): 0.0043 Smith-Waterman score: 222; 27.136% identity (28.125% ungapped) in 199 aa overlap (369-565:44-237) 340 350 360 370 380 390 mKIAA1 KYLENPNALTERELKVAYTTVLQEWLRLACRSDAHPELVRRHLVTFRAM--SARLLDYVV :. : . :. .. :. :: .: mKIAA0 LHRGAVTGHEECVDALLQHGAKCLLRDSRGRTPIHLSAACGHIGVLGALLQSATSVDANP 20 30 40 50 60 70 400 410 420 430 440 450 mKIAA1 NIADSNGNTALHYSVSHANFPVVRQLLDSGVCHVDKLNRAGYSPIMLTALATLKTQDDIE ..:..: ::::.. ... :. ::.. : . :.. ..::. ... .. : mKIAA0 AVVDNHGYTALHWACYNGHETCVELLLEQDVFQ--KIDGNAFSPLHCAVIND--NEGAAE 80 90 100 110 120 460 470 480 490 500 510 mKIAA1 TILQLFRLGNVNAKASQAGQTALMLAVSHGRVDVVRALLACEADVNIQDEDGSTALMCAC ... . . ::: :. :.: : :. .:. .. ::. .:.:: : :.: :: : mKIAA0 MLIDSLGASIVNATDSK-GRTPLHAAAFTDHVECLQLLLSQNAQVNSADSTGKTPLMMAA 130 140 150 160 170 180 520 530 540 550 560 570 mKIAA1 EHGHKEITGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMNIKCSFAPMSD :.:. . . .:.. : :..: :.. .::: .: :. : .. ... mKIAA0 ENGQTNTVEMLVSSASADLTLQDKSKNTALHLACGKGHETSALLILEKITDRNLINATNA 190 200 210 220 230 240 580 mKIAA1 YESPASSSAEE mKIAA0 ALQTPLHVAARNGLTMVVQELLGKGASVLAVDENGYTPALACAPNKDVADCLALILATMM 250 260 270 280 290 300 >>mKIAA1306 ( 1347 res) mbg04314 (1347 aa) initn: 190 init1: 104 opt: 216 Z-score: 146.0 bits: 38.2 E(): 0.0055 Smith-Waterman score: 216; 28.718% identity (31.461% ungapped) in 195 aa overlap (378-561:7-195) 350 360 370 380 390 400 mKIAA1 TERELKVAYTTVLQEWLRLACRSDAHPELVRRHLVTFRAMSARLLDYV----VNIADSNG .: : : .:.:: . ::. : .: mKIAA1 EDVGTAQRLLQRPRPGKAKLLGSTKKINVNFQDPDG 10 20 30 410 420 430 440 450 460 mKIAA1 NTALHYSVSHANFPVVRQLLDSGVCHVDKLNRAGYSPIMLTALATLKTQDDIETILQLFR .:::... ..: .. ::.. . :: . :. :. .: : : . ... mKIAA1 FSALHHAALNGNTELISLLLEAQAA-VDIKDNKGMRPLHYAAW-----QGRKEPMKLVLK 40 50 60 70 80 90 470 480 490 500 510 520 mKIAA1 LGNVNAKASQAGQTALMLAVSHGRVDVVRALLACEADVNIQDEDGSTALMCACEHGHKEI :.. :. :. : ::..::. :: . :: ... . :..:.: : ::: :. . mKIAA1 AGSAVNVPSDEGHIPLHLAAQHGHYDVSEMLLQHQSNPCMVDNSGKTPLDLACEFGRVGV 100 110 120 130 140 150 530 540 550 560 570 mKIAA1 TGLLLAVPSCDISL-------TDRDGSTALMVALDAGQSEIASMLYSRMNIKCSFAPMSD . :::. : : :: .:.. : .: :. .: .: mKIAA1 VQLLLSSNMCAALLEPRPGDTTDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINRQTKSGT 160 170 180 190 200 210 580 mKIAA1 YESPASSSAEE mKIAA1 ALHEAALCGKTEVVRLLLDSGINAQVRNTYSQTALDIVHQFTTSQASKEIKQLLREASAA 220 230 240 250 260 270 >>mKIAA1223 ( 600 res) mfj51380 (600 aa) initn: 138 init1: 138 opt: 209 Z-score: 145.6 bits: 37.0 E(): 0.0057 Smith-Waterman score: 221; 33.125% identity (34.868% ungapped) in 160 aa overlap (370-527:117-270) 340 350 360 370 380 390 mKIAA1 YLENPNALTERELKVAYTTVLQEWLRLACRSDAHPELVRRHLVTFRAMSARLLDYVVNI- .:..: : : . .:. .:. .:. mKIAA1 RNALRVAALEGHRDIVELLFSHGADVNYKDADGRPTLYILALENQLTMAEYFLENGANVE 90 100 110 120 130 140 400 410 420 430 440 450 mKIAA1 -ADSNGNTALHYSVSHANFPVVRQLLDSGVCHVDKLNRAGYSPIMLTALATLKTQDDIET .:..: :::: : ... .:: :. .::.: .: : .:: . : ... mKIAA1 ASDAEGRTALHVSCWQGHVEMVRVLI---ACHAD-VNAADNEK--RSALQSAAWQGHVKV 150 160 170 180 190 200 460 470 480 490 500 510 mKIAA1 ILQLFRLGNVNAKASQAGQTALMLAVSHGRVDVVRALLACEADVNIQDEDGSTALMCACE . :.. : : .. . : ::: .:...:.::::..:: :: : :. : ::. : . mKIAA1 VQLLIEHGAVVDHTCNQGATALCIAAQEGHVDVVQVLLEHGADPNHADQFGRTAMRVAAK 210 220 230 240 250 260 520 530 540 550 560 570 mKIAA1 HGHKEITGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRMNIKCSFAPMSDY .::..: :: mKIAA1 NGHSQIIKLLEKYGASSLNGCSPSPVHTMEQKPPQSAPSKMQSLTIRSNSSGGTGGGDLQ 270 280 290 300 310 320 >>mKIAA1728 ( 1313 res) mbg03474 (1313 aa) initn: 147 init1: 118 opt: 210 Z-score: 142.4 bits: 37.5 E(): 0.0086 Smith-Waterman score: 210; 28.571% identity (29.762% ungapped) in 175 aa overlap (396-564:448-621) 370 380 390 400 410 420 mKIAA1 LACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVRQLLD- :. :..:. :: .:. ... ... ::. mKIAA1 MSENGMNALCYAAAAGHMKLVCLLIKKGARVDHLDKKGQCALVHSALRGHSDILQYLLNC 420 430 440 450 460 470 430 440 450 460 470 mKIAA1 ---SGVCHVDKLNRAGYSPIMLTALATLKTQDDIETILQLFRLG--NVNAKASQAGQTAL .: . : .. ::: :.. .. ....: . . .::. . :.::: mKIAA1 EWSAGPPQPGTLRKSQALQQALTAAASMGHSSVVQSLLGMAEEHEIEVNGTDTLWGETAL 480 490 500 510 520 530 480 490 500 510 520 530 mKIAA1 MLAVSHGRVDVVRALLACEADVNIQDEDGSTALMCACEHGHKEITGLLLAVPSCDISLTD :...:.:.. . :: : :. .. : :.:: ..:: ... ::: .::..:.: mKIAA1 TAAAGRGKVEICELLLERGAAVSRANRRGVPPLFCAARQGHWQVVRLLLDR-GCDVNLSD 540 550 560 570 580 590 540 550 560 570 580 mKIAA1 RDGSTALMVALDAGQSEIASMLYSRMNIKCSFAPMSDYESPASSSAEE ..: : :::: :. . .: :. mKIAA1 KQGRTPLMVASCEGHLSTVEFLLSKGAALSSLDKEGLSALSWACLKGHRAVVQYLVEEGA 600 610 620 630 640 650 587 residues in 1 query sequences 1768430 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:47:08 2006 done: Mon Mar 27 10:47:09 2006 Scan time: 0.800 Display time: 0.140 Function used was FASTA [version 3.4t11 Apr 17, 2002]