Comparison of KIAA cDNA sequences between mouse and human (KIAA1518)
<<Original sequence data>>
mouse mKIAA1518 (mej02266) length: 2641 bp, CDS: 2 - 1765
human KIAA1518 (sh00483) length: 5156 bp, CDS: 239 - 2869
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 1075 - 1075 0 1 100.0
CDS: 1076 - 2872 1414 353 20.0
3'UTR: 2873 - 3989 508 348 40.7
amino acid
CDS: 1076 - 2872 470 128 21.4
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mej02266 1 .................................................. 1
sh00483 1 CAGAGAAGCGAAGACAGAGACGTGGAAAGACAGGGAGAGAGACACGGAGA 50
51 ----+----*----+----*----+----*----+----*----+----* 100
mej02266 1 .................................................. 1
sh00483 51 GAGACGCAGAAGGACAGAGACGTGGAGAGAGACGCAGAGAGACAGAGACG 100
101 ----+----*----+----*----+----*----+----*----+----* 150
mej02266 1 .................................................. 1
sh00483 101 TGGAGAGACACAGAGAGACTTGGAGAGAGACAAAGCAAGACAGGACGGGA 150
151 ----+----*----+----*----+----*----+----*----+----* 200
mej02266 1 .................................................. 1
sh00483 151 GAACAAGGACAAGCTCAGGTGCCCCTGGAGCCCCAGCCCTGCCTTCATGC 200
201 ----+----*----+----*----+----*----+----*----+----* 250
mej02266 1 .................................................. 1
sh00483 201 TCAGCAGGTGCCCTACCTGGCCCATCCTCCCAAGGTAAGCCTCAGCCGGT 250
A S A G
251 ----+----*----+----*----+----*----+----*----+----* 300
mej02266 1 .................................................. 1
sh00483 251 GCTGCAGGCAGTCTGACTCGCAGTCCCTCAAGTGACTTCCAAGGAGCATC 300
A A G S L T R S P S S D F Q G A S
301 ----+----*----+----*----+----*----+----*----+----* 350
mej02266 1 .................................................. 1
sh00483 301 TGTAGAAAAGAAGATGGCCCAGGTCCTGCACGTGCCTGCTCCCTTCCCAG 350
V E K K M A Q V L H V P A P F P G
351 ----+----*----+----*----+----*----+----*----+----* 400
mej02266 1 .................................................. 1
sh00483 351 GGACCCCTGGCCCAGCCTCCCCACCTGCCTTCCCTGCCAAGGACCCCGAT 400
T P G P A S P P A F P A K D P D
401 ----+----*----+----*----+----*----+----*----+----* 450
mej02266 1 .................................................. 1
sh00483 401 CCACCCTACTCCGTGGAGACCCCCTATGGCTACCGCCTGGACCTGGACTT 450
P P Y S V E T P Y G Y R L D L D F
451 ----+----*----+----*----+----*----+----*----+----* 500
mej02266 1 .................................................. 1
sh00483 451 CCTCAAGTACGTGGATGACATCGAGAAGGGCCACACGCTGCGACGCGTGG 500
L K Y V D D I E K G H T L R R V A
501 ----+----*----+----*----+----*----+----*----+----* 550
mej02266 1 .................................................. 1
sh00483 501 CAGTGCAGCGCCGCCCCCGCCTGAGCTCGCTGCCCCGTGGCCCTGGCTCC 550
V Q R R P R L S S L P R G P G S
551 ----+----*----+----*----+----*----+----*----+----* 600
mej02266 1 .................................................. 1
sh00483 551 TGGTGGACGTCCACTGAGTCGCTGTGCTCCAATGCCAGTGGGGACAGCCG 600
W W T S T E S L C S N A S G D S R
601 ----+----*----+----*----+----*----+----*----+----* 650
mej02266 1 .................................................. 1
sh00483 601 CCACTCAGCCTATTCCTACTGCGGCCGTGGCTTCTACCCTCAGTATGGTG 650
H S A Y S Y C G R G F Y P Q Y G A
651 ----+----*----+----*----+----*----+----*----+----* 700
mej02266 1 .................................................. 1
sh00483 651 CTCTGGAGACCCGCGGTGGCTTCAATCCGCGGGTGGAGCGCACGCTGCTG 700
L E T R G G F N P R V E R T L L
701 ----+----*----+----*----+----*----+----*----+----* 750
mej02266 1 .................................................. 1
sh00483 701 GATGCCCGTCGCCGTCTCGAGGACCAGGCGGCCACACCCACCGGCCTGGG 750
D A R R R L E D Q A A T P T G L G
751 ----+----*----+----*----+----*----+----*----+----* 800
mej02266 1 .................................................. 1
sh00483 751 CTCCCTGACCCCCAGTGCGGCCGGCTCGACAGCCTCCCTGGTGGGCGTGG 800
S L T P S A A G S T A S L V G V G
801 ----+----*----+----*----+----*----+----*----+----* 850
mej02266 1 .................................................. 1
sh00483 801 GGTTGCCACCCCCGACACCACGGAGTTCAGGACTGTCCACACCGGTGCCT 850
L P P P T P R S S G L S T P V P
851 ----+----*----+----*----+----*----+----*----+----* 900
mej02266 1 .................................................. 1
sh00483 851 CCCAGTGCCGGGCACCTGGCCCACGTGCGGGAGCAGATGGCGGGTGCCCT 900
P S A G H L A H V R E Q M A G A L
901 ----+----*----+----*----+----*----+----*----+----* 950
mej02266 1 .................................................. 1
sh00483 901 GCGGAAGCTGCGGCAGCTGGAGGAGCAGGTGAAGCTGATCCCTGTGCTCC 950
R K L R Q L E E Q V K L I P V L Q
951 ----+----*----+----*----+----*----+----*----+----* 1000
mej02266 1 .................................................. 1
sh00483 951 AGGTGAAGCTCTCGGTGCTCCAGGAGGAAAAGCGGCAGCTCACAGTACAA 1000
V K L S V L Q E E K R Q L T V Q
1001 ----+----*----+----*----+----*----+----*----+----* 1050
mej02266 1 .................................................. 1
sh00483 1001 CTTAAGAGCCAGAAGTTCCTGGGCCACCCCACAGCGGGCCGGGGTCGCAG 1050
L K S Q K F L G H P T A G R G R S
1051 ----+----*----+----*----+----*----+----*----+----* 1100
A P D D P A A L E
mej02266 1 ........................GGCCCCTGACGACCCTGCTGCACTAG 26
|||| || ||||| | ||||| |
sh00483 1051 CGAGCTCTGCCTGGACCTCCCCGATCCCCCAGAGGACCCAGTGGCACTGG 1100
E L C L D L P D P P E D P V A L E
1101 ----+----*----+----*----+----*----+----*----+----* 1150
T R S V G T W V R E R D L G I P
mej02266 27 AGACCCGCTCGGTGGGCACCTGGGTTAGAGAACGGGACTTGGGCATTCCA 76
||||||| |||||||||||||| ||||||||||||||||||| ||
sh00483 1101 AGACCCGGAGTGTGGGCACCTGGGTCCGAGAACGGGACTTGGGCATGCCT 1150
T R S V G T W V R E R D L G M P
1151 ----+----*----+----*----+----*----+----*----+----* 1200
D G E A A L V A K V A V L E T Q L
mej02266 77 GATGGTGAAGCTGCCCTGGTAGCTAAAGTGGCCGTGTTGGAGACCCAGCT 126
||||| || |||||||| | || || || || ||| |||||||||||||
sh00483 1151 GATGGGGAGGCTGCCCTCGCCGCCAAGGTCGCTGTGCTGGAGACCCAGCT 1200
D G E A A L A A K V A V L E T Q L
1201 ----+----*----+----*----+----*----+----*----+----* 1250
K K A L Q E L R A A Q T Q Q V D L
mej02266 127 CAAAAAAGCGCTACAGGAGCTGCGGGCGGCTCAGACCCAGCAGGTCGACC 176
||| || ||||| |||||||||| ||| |||||| ||| ||||| ||||
sh00483 1201 CAAGAAGGCGCTGCAGGAGCTGCAGGCAGCTCAGGCCCGGCAGGCTGACC 1250
K K A L Q E L Q A A Q A R Q A D P
1251 ----+----*----+----*----+----*----+----*----+----* 1300
Q P Q A W P P P D T Q V R V D T
mej02266 177 TCCAGCCCCAGGCCTGGCCACCACCAGACACCCAGGTCCGCGTGGACACC 226
||||||||||||||||||||| || |||| || |||||||||||| ||
sh00483 1251 CCCAGCCCCAGGCCTGGCCACCGCCGGACAGCCCGGTCCGCGTGGATACA 1300
Q P Q A W P P P D S P V R V D T
1301 ----+----*----+----*----+----*----+----*----+----* 1350
V R V V E G P R E V E V A A S T A
mej02266 227 GTGCGAGTAGTGGAGGGTCCCCGGGAAGTGGAGGTGGCAGCCAGCACGGC 276
|| || || || || || || ||||| |||||||||| |||||||| ||
sh00483 1301 GTCCGGGTGGTAGAAGGGCCACGGGAGGTGGAGGTGGTGGCCAGCACAGC 1350
V R V V E G P R E V E V V A S T A
1351 ----+----*----+----*----+----*----+----*----+----* 1400
A G A L A Q R A Q S L E P Y G T G
mej02266 277 AGCCGGGGCCCTTGCACAGCGAGCTCAGAGTCTGGAACCCTACGGAACAG 326
|| || |||| |||||||| || ||||| ||||| || ||||| ||||
sh00483 1351 CGCTGGCGCCCCCGCACAGCGGGCCCAGAGCCTGGAGCCTTACGGCACAG 1400
A G A P A Q R A Q S L E P Y G T G
1401 ----+----*----+----*----+----*----+----*----+----* 1450
L K A L T T S G G P E N T L V F
mej02266 327 GGCTGAAGGCCCTGACCACATCTGGGGGACCAGAGAACACCCTCGTGTTC 376
|||||| ||||||| | | |||| | || |||| | | | ||||||
sh00483 1401 GGCTGAGGGCCCTGGCAATGCCTGGTAGGCCTGAGAGCCCACCTGTGTTC 1450
L R A L A M P G R P E S P P V F
1451 ----+----*----+----*----+----*----+----*----+----* 1500
R S H E V V E T M C P L P T A T T
mej02266 377 CGCAGTCATGAAGTGGTGGAGACCATGTGCCCACTGCCCACAGCTACCAC 426
||||| || || ||||||||||| ||||||||| ||||| | || | ||
sh00483 1451 CGCAGCCAGGAGGTGGTGGAGACAATGTGCCCAGTGCCCGCTGCAGCTAC 1500
R S Q E V V E T M C P V P A A A T
1501 ----+----*----+----*----+----*----+----*----+----* 1550
G N V H T A K K I S I T E R S C T
mej02266 427 TGGCAATGTGCACACAGCCAAGAAGATCAGCATTACAGAACGGAGTTGCA 476
|||| || || | | |||||||| ||||| ||||| || || |||
sh00483 1501 CAGCAACGTCCATATGGTGAAGAAGATTAGCATCACAGAGCGAAGCTGCG 1550
S N V H M V K K I S I T E R S C D
1551 ----+----*----+----*----+----*----+----*----+----* 1600
G A P R M T E P S S - * S T
mej02266 477 CCGGTGCACCCAGGATGACAGAGCCTTCCTCCG.......TTAATCCACG 519
|| ||| | | | |||| | | ||| || || |
sh00483 1551 ATGGAGCAGCAGGCCTCCCAGAAGTTCCTGCCGAATCGTCTTCGTCACCC 1600
G A A G L P E V P A E S S S S P
1601 ----+----*----+----*----+----*----+----*----+----* 1650
- A A A S V V Q P E - P V -
mej02266 520 CC.....CTGCTGCAGCCTCTGTGGTACAGCCTGAGAA...CCCTGTCC. 560
|| | | | |||||| | |||||||||||| | | | ||
sh00483 1601 CCGGGGTCCGAGGTAGCCTCCCTTACACAGCCTGAGAAGAGCACAGGCCG 1650
P G S E V A S L T Q P E K S T G R
1651 ----+----*----+----*----+----*----+----*----+----* 1700
A A Q D T T D K K P T R P A A
mej02266 561 ..CGGCTGCCCAGGACACCACTGACAAGAAGCCCACCAGGCCAGCAGCAG 608
| | ||||||| |||| ||| | |||||||||||| |||||
sh00483 1651 AGTGCCCACCCAGGAGCCCACCCACAGGGAGCCCACCAGGC...AAGCAG 1697
V P T Q E P T H R E P T R Q A A
1701 ----+----*----+----*----+----*----+----*----+----* 1750
S Q D S Q A A D G A G R A -
mej02266 609 CATCGCAGGACTCACAAGCGGCTGACGGAGCAGGCAGAGCCTC....... 651
| || || || || | | ||| | || | ||| | || |
sh00483 1698 CCTCCCAAGAGTCCGAGGAGGCCGGGGGCACCGGCGGGCCCCCGGCAGGC 1747
S Q E S E E A G G T G G P P A G
1751 ----+----*----+----*----+----*----+----*----+----* 1800
L A T K R K E D P A D P E V N
mej02266 652 .....TTTGGCCACGAAGAGGAAAGAGGACCCCGCAGACCCTGAAGTCAA 696
| || ||| |||||||||| |||||||| | | |
sh00483 1748 GTGCGATCTATCATGAAACGGAAAGAGGAGGTTGCAGACCCCACGGCCCA 1797
V R S I M K R K E E V A D P T A H
1801 ----+----*----+----*----+----*----+----*----+----* 1850
Q R N L Q F V G V N G G Y E S P S
mej02266 697 CCAGAGGAACCTCCAGTTTGTGGGAGTCAATGGCGGGTATGAGTCCCCCT 746
|| ||||| ||||||||| ||||| ||||| |||||||||||||| | |
sh00483 1798 CCGGAGGAGCCTCCAGTTCGTGGGGGTCAACGGCGGGTATGAGTCGTCAT 1847
R R S L Q F V G V N G G Y E S S S
1851 ----+----*----+----*----+----*----+----*----+----* 1900
E D S S T A E - S E H E S T E
mej02266 747 CGGAGGACTCCAGCACAGCAGAAAA...CTCCGAACACGAGAGCACAGAG 793
| |||||||||||||||||||| || ||| || || | |||||||||
sh00483 1848 CCGAGGACTCCAGCACAGCAGAGAACATCTCAGACAACAACAGCACAGAG 1897
E D S S T A E N I S D N N S T E
1901 ----+----*----+----*----+----*----+----*----+----* 1950
N E G P E P P A R V L S P A E C P
mej02266 794 AACGAGGGCCCGGAGCCACCAGCAAGGGTTCTGAGCCCAGCTGAATGTCC 843
||||||| ||| ||||| | ||||||| ||| || ||| ||
sh00483 1898 AACGAGGCCCCAGAGCCGAGGGAGAGGGTTCCGAGTGTGGCCGAAGCCCC 1947
N E A P E P R E R V P S V A E A P
1951 ----+----*----+----*----+----*----+----*----+----* 2000
Q L R P P G A A V A T T S L E G P
mej02266 844 TCAGCTCAGGCCTCCAGGGGCTGCAGTGGCCACGACCAGTCTGGAGGGGC 893
|||||||||||| ||||| | |||| ||||| |||||| | | ||| |
sh00483 1948 CCAGCTCAGGCCTGCAGGGACGGCAGCGGCCAAGACCAGCCGGCAGGAGT 1997
Q L R P A G T A A A K T S R Q E C
2001 ----+----*----+----*----+----*----+----*----+----* 2050
Q L S Q E S Q R V P A P E V A S
mej02266 894 CCCAGCTCTCCCAGGAATCCCAGCGTGTGCCTGCACCTGAGGTGGCGTCA 943
||||| || | ||||| |||| | || | |||||| ||| |||
sh00483 1998 GTCAGCTGTCTCGAGAATCTCAGCACATACCCACTGCTGAGGGGGCATCA 2047
Q L S R E S Q H I P T A E G A S
2051 ----+----*----+----*----+----*----+----*----+----* 2100
G P D P E E E I R M D L S P D L I
mej02266 944 GGACCCGATCCTGAGGAGGAAATTCGGATGGATCTGAGCCCTGACCTCAT 993
||| | | | |||||||| || ||||||| || ||||||||||||||
sh00483 2048 GGATCAAACACGGAGGAGGAGATCAGGATGGAGCTAAGCCCTGACCTCAT 2097
G S N T E E E I R M E L S P D L I
2101 ----+----*----+----*----+----*----+----*----+----* 2150
S A C L A L E K Y L E N P N A L T
mej02266 994 ATCAGCCTGCTTGGCCCTGGAGAAATACCTGGAGAACCCCAATGCCCTCA 1043
|||||||||||||||||||| || |||||||| || ||||| |||||||
sh00483 2098 CTCAGCCTGCTTGGCCCTGGAAAAGTACCTGGACAATCCCAACGCCCTCA 2147
S A C L A L E K Y L D N P N A L T
2151 ----+----*----+----*----+----*----+----*----+----* 2200
E R E L K V A Y T T V L Q E W L
mej02266 1044 CAGAGCGAGAACTGAAAGTGGCCTATACCACAGTGCTTCAGGAGTGGCTG 1093
||||||| || |||||||||||||| ||||||||||| ||||||||||||
sh00483 2148 CAGAGCGGGAGCTGAAAGTGGCCTACACCACAGTGCTGCAGGAGTGGCTG 2197
E R E L K V A Y T T V L Q E W L
2201 ----+----*----+----*----+----*----+----*----+----* 2250
R L A C R S D A H P E L V R R H L
mej02266 1094 CGCCTGGCCTGCCGCAGTGACGCACACCCTGAGCTTGTGCGGCGACATCT 1143
||||||||||||||||| ||||||||||| ||||| |||||||| || ||
sh00483 2198 CGCCTGGCCTGCCGCAGCGACGCACACCCCGAGCTGGTGCGGCGGCACCT 2247
R L A C R S D A H P E L V R R H L
2251 ----+----*----+----*----+----*----+----*----+----* 2300
V T F R A M S A R L L D Y V V N I
mej02266 1144 AGTCACCTTCAGGGCCATGTCTGCCCGGCTGCTGGACTACGTGGTCAACA 1193
||||| ||| ||||||||||||| |||||||||||||||||||||||||
sh00483 2248 GGTCACGTTCCGGGCCATGTCTGCGCGGCTGCTGGACTACGTGGTCAACA 2297
V T F R A M S A R L L D Y V V N I
2301 ----+----*----+----*----+----*----+----*----+----* 2350
A D S N G N T A L H Y S V S H A
mej02266 1194 TCGCCGACAGCAATGGTAACACTGCCCTGCACTACTCAGTGTCACACGCC 1243
||||||||||||| || ||||| |||||||||||||| ||||| || |||
sh00483 2298 TCGCCGACAGCAACGGCAACACAGCCCTGCACTACTCCGTGTCTCATGCC 2347
A D S N G N T A L H Y S V S H A
2351 ----+----*----+----*----+----*----+----*----+----* 2400
N F P V V R Q L L D S G V C H V D
mej02266 1244 AACTTCCCTGTGGTGCGGCAGTTGCTGGACAGCGGGGTCTGTCATGTGGA 1293
|||||||| ||||||| |||| |||| |||||||| ||||| | |||||
sh00483 2348 AACTTCCCCGTGGTGCAGCAGCTGCTCGACAGCGGTGTCTGCAAGGTGGA 2397
N F P V V Q Q L L D S G V C K V D
2401 ----+----*----+----*----+----*----+----*----+----* 2450
K L N R A G Y S P I M L T A L A T
mej02266 1294 CAAGCTGAACCGTGCCGGCTACAGCCCTATTATGCTCACTGCCCTGGCCA 1343
||| | ||||||||| ||||||||||||||||||||||| ||||||||||
sh00483 2398 CAAACAGAACCGTGCTGGCTACAGCCCTATTATGCTCACCGCCCTGGCCA 2447
K Q N R A G Y S P I M L T A L A T
2451 ----+----*----+----*----+----*----+----*----+----* 2500
L K T Q D D I E T I L Q L F R L
mej02266 1344 CGTTGAAGACCCAGGACGACATTGAGACCATCCTTCAGCTCTTCCGGCTT 1393
| ||||||||||||||||||| ||||| ||||||||||||||||||||
sh00483 2448 CCCTGAAGACCCAGGACGACATCGAGACTGTCCTTCAGCTCTTCCGGCTT 2497
L K T Q D D I E T V L Q L F R L
2501 ----+----*----+----*----+----*----+----*----+----* 2550
G N V N A K A S Q A G Q T A L M L
mej02266 1394 GGGAATGTCAATGCCAAAGCCAGCCAGGCAGGACAGACGGCCCTGATGCT 1443
|| || |||||||||||||||||||||||||||||||||||||||||||
sh00483 2498 GGCAACATCAATGCCAAAGCCAGCCAGGCAGGACAGACGGCCCTGATGCT 2547
G N I N A K A S Q A G Q T A L M L
2551 ----+----*----+----*----+----*----+----*----+----* 2600
A V S H G R V D V V R A L L A C E
mej02266 1444 GGCCGTCAGCCACGGGCGGGTGGACGTGGTGAGAGCATTGCTGGCCTGTG 1493
||||||||||||||||||||||||||| || | ||| ||||||||||||
sh00483 2548 GGCCGTCAGCCACGGGCGGGTGGACGTTGTCAAAGCCCTGCTGGCCTGTG 2597
A V S H G R V D V V K A L L A C E
2601 ----+----*----+----*----+----*----+----*----+----* 2650
A D V N I Q D E D G S T A L M C
mej02266 1494 AGGCGGACGTCAACATTCAGGATGAGGACGGCTCCACGGCCCTGATGTGT 1543
|||| || |||||| | || ||||| ||||||||||||||||| |||||
sh00483 2598 AGGCAGATGTCAACGTGCAAGATGATGACGGCTCCACGGCCCTCATGTGC 2647
A D V N V Q D D D G S T A L M C
2651 ----+----*----+----*----+----*----+----*----+----* 2700
A C E H G H K E I T G L L L A V P
mej02266 1544 GCATGTGAGCACGGACACAAGGAGATCACCGGGCTCCTGCTGGCTGTGCC 1593
|| ||||||||||| |||||||||||| | ||||| |||||||| |||||
sh00483 2648 GCCTGTGAGCACGGCCACAAGGAGATCGCGGGGCTGCTGCTGGCCGTGCC 2697
A C E H G H K E I A G L L L A V P
2701 ----+----*----+----*----+----*----+----*----+----* 2750
S C D I S L T D R D G S T A L M V
mej02266 1594 TAGCTGTGACATCTCACTCACTGACCGCGACGGGAGCACAGCACTGATGG 1643
|||||||||||||||||||| || ||||| ||||||||||| |||||||
sh00483 2698 CAGCTGTGACATCTCACTCACAGATCGCGATGGGAGCACAGCTCTGATGG 2747
S C D I S L T D R D G S T A L M V
2751 ----+----*----+----*----+----*----+----*----+----* 2800
A L D A G Q S E I A S M L Y S R
mej02266 1644 TGGCCCTGGACGCTGGGCAGAGCGAGATCGCATCTATGCTGTACTCACGC 1693
||||| ||||||| |||||||| ||||| || || |||||||| || |||
sh00483 2748 TGGCCTTGGACGCAGGGCAGAGTGAGATTGCGTCCATGCTGTATTCCCGC 2797
A L D A G Q S E I A S M L Y S R
2801 ----+----*----+----*----+----*----+----*----+----* 2850
M N I K C S F A P M S D Y E S P A
mej02266 1694 ATGAACATCAAGTGCTCGTTCGCTCCCATGTCAGACTACGAGAGTCCGGC 1743
|||||||||||||||||||| || || |||||||| ||||||| || |
sh00483 2798 ATGAACATCAAGTGCTCGTTTGCCCCAATGTCAGATGACGAGAGCCCTAC 2847
M N I K C S F A P M S D D E S P T
2851 ----+----*----+----*----+----*----+----*----+----* 2900
S S S A E E -
mej02266 1744 TTCGTCTTCAGCCGAGGAGT.....GAATACAGGGAGGAGCCAGTGAGTC 1788
|| || || || || |||| | ||| || |||| || |
sh00483 2848 ATCATCCTCGGCAGAAGAGTAGCCGTGAGGGAGGCGGGGACCAGCCAGAC 2897
S S S A E E *
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mej02266 1789 CCCCAGGACCCACCAGCCACAAGCCACGCATCAAACCGTCCCTCCTCCAT 1838
| || | ||| || || || || || | | | | |
sh00483 2898 CGGGAG..CAAACCGTCCCTTGTCCCCGTCTCCTCCCTGTTCCCGTTCCT 2945
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mej02266 1839 CCCT...CTGTCCCATTCTGCCTCGGCATTCCTCA............... 1870
|||| | |||| || ||| || | ||
sh00483 2946 CCCTGGCCCACCCCACTCACACTCCCCAAGGCCCACGGCTCAAAGGCAAG 2995
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mej02266 1871 ......GCCCCTGAACTTCCCTGAGGGAGCCCTGACATCTACCAGGCTCA 1914
|||| |||||||| |||||||| ||| | || | |||
sh00483 2996 CGAGCTCTCCCTCTGCTTCCCTGGGGGAGCCCCGACGGCCACAGGACTCC 3045
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mej02266 1915 AGCTCCTGGAAGCCTTTCCCAGCACCCTGGGTTCAAAG........CCAG 1956
|||||| | | |||| || ||| |||||||| |
sh00483 3046 AGCTCCAAGTGGGTTTTCTTGGCTCCC.CTGTTCAAAGTGGCCACAGCGC 3094
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mej02266 1957 AAAGCCAAGCTACATTCTCCTCCCAGTTGGCACCAGTTGACAACGCCTTG 2006
| | | |||| | ||||| | ||||| |||| | | || |
sh00483 3095 AGACCGAAGCAAAATTCTTGTATACATTGGCGCCAG..GGCTGATGCTGG 3142
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mej02266 2007 GGTGTGGGTTTCTTGTAAAGAACATAGAGAACAATCAGCCGGCAATTATG 2056
|||||||||| || | |||||||| ||||||||||||| || |||||||
sh00483 3143 GGTGTGGGTT..TTATGAAGAACATTGAGAACAATCAGCTGGTAATTATG 3190
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mej02266 2057 GGAGGAGGAAGGGGGGGCAAGAAGAGAAAATACTGTATTCTTGAGTCATT 2106
| |||||||| ||| | || |||||| |||||| |||| |||||
sh00483 3191 GATGGAGGAAGAGGGAGAGGAAA...AAAATATTGTATTTTTGAATCATT 3237
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mej02266 2107 GTTAGGGGATGGGAGGGG....TCAGAATTCAGTTGCTAAATTTGAATGT 2152
||| ||| ||| ||| | || ||| ||||| | ||||||| ||
sh00483 3238 GTTGCAGGAGGGGGTGGGAATCTTAGGATT.TGTTGCCAGATTTGAAAGT 3286
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mej02266 2153 CACTGGAA.TGTTACAGTGTCTATTGTCTCCTCATCTTTACAGCAGGTCT 2201
|||||||| | | | | || || |||| | ||| |
sh00483 3287 CACTGGAACTTGCATATTTTCATTTTAATCCTAAGTGTTA........TT 3328
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mej02266 2202 CCACAAAGCCTGCTCACCACCCTTTGT.CACCTCATTTCATTGTCTAGTG 2250
| || || ||||||| | | || ||||| ||||||| |
sh00483 3329 ACGCACCAGTTGGGGTTCACCCTTCATCCCCCACATTTAATTGTCTGATA 3378
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mej02266 2251 TACAATAGGGTCTTGTCCACTGCCCTCCACCTCCAGACTGTGTCTTCAGG 2300
|| ||||| || ||||||||||| || | |||| | | | ||
sh00483 3379 TAGAATAGTGTTGTGTCCACTGCC.....CCGCTAGACGGCTTTCTTAG. 3422
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mej02266 2301 GCCTGGGGTGTCTCTTGTGATTGCTTTACAGAATAAGATTGCCGTACCTT 2350
||| | |||| || ||| || ||| | | | | |
sh00483 3423 ....GGGAATTTTCTTCTGGTTGTTTCACAAGACA.......GATTCTGT 3461
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mej02266 2351 AGCCGCCTGCCTCCAGTCAGAAAGCAGTGTTTTCATTTGCCTTTTTCCTT 2400
| | || | | || |||| |||||| ||| |||
sh00483 3462 CCTTGTCACCCGGGACAGAAAACTCAGTCTTTTCA...CCCTCATTCAGA 3508
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mej02266 2401 TCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACAC 2450
| | |||| | || ||| || || || |
sh00483 3509 TGAAGGGACTCAGGACAGGCTCTGTGACTTACAGGGACCCAATCA...AT 3555
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mej02266 2451 ACACACACACACACACACACGCACGCGCGCGCGCGCACACATGCA..... 2495
|||| | | | | || ||| | | ||| || |
sh00483 3556 TCACAATGAGAAATTACCGGCCAGGCGTGGTGACTCACGTCTGTAATCCC 3605
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mej02266 2496 .................................................. 2496
sh00483 3606 AGCACTTTGGGAGGGCAAGGCAAGAGCTTGAGCTTGAGCCTAGACGTTAA 3655
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mej02266 2496 .................................................. 2496
sh00483 3656 AGACCAGCCTGGGCAACACAGCAAGACCCATCTCTACAAGAAATTTAAAA 3705
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mej02266 2496 .................................................. 2496
sh00483 3706 ACTAGCCAGGCGTGGTGGTGCGCGCCTGTAGTCCCAGCTACTTGGGAGGC 3755
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mej02266 2496 .........................................CAGGGCTTG 2504
|| ||
sh00483 3756 TGAGCCCTGGAGGTCGAGGCTACAGTGAGCTATGATCACACCATTGCACT 3805
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mej02266 2505 TCATCTTGCAGCTGATAGCTGATGTCCTGTGACTTGGAAATGACCAACTT 2554
||| | || | ||| || ||||| | | || | ||
sh00483 3806 TCAGCCTGGGCGACACAGC.GAGACCCTGTCTCAAGAAAGAAAAGAAAAA 3854
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mej02266 2555 ACAAGAAGTTATGCTG..ACCTCCCTGTTCCCCACGGGGAGTGCTTGGCA 2602
| || ||| | | ||| | | |||||||| |||| |||||||
sh00483 3855 GAGACAAATTACCCAGAAACCCCTCCCTTCCCCACATGGAGGCCTTGGCA 3904
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mej02266 2603 GAGGAGACTACTTCTAGAAATACTTTCAGACCTACAAAC........... 2641
| | | | | ||||||| | ||||||||| | ||
sh00483 3905 AATGTTAATTTTCCTAGAAAATCCTTCAGACCTGAAGACGCAGGAAAAGA 3954
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mej02266 2642 .................................................. 2642
sh00483 3955 ATCTGGCTCTCAGGGTGGCTTCTGCGTCCCCGCCGCCAGGCCCCAGACTA 4004
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mej02266 2642 .................................................. 2642
sh00483 4005 TGGTCACAGGGCCGTCCTGTTCCTCCCCGGGACTCCAGAATTTCTCTCCT 4054
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mej02266 2642 .................................................. 2642
sh00483 4055 CAAAGGAAAGAAAACAGGGCATGCGCTTGTTGGCAAAACGCAGGGCCGGC 4104
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mej02266 2642 .................................................. 2642
sh00483 4105 TCCCAAAAACCCCATGTGTGTACGATTAAAAGTTGGCCGTCCCCAGGCCT 4154
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mej02266 2642 .................................................. 2642
sh00483 4155 CCCAGCGCAAACTTAAAGAGACAGGGCTTTGCTGAAAACCAAACATGGGC 4204
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mej02266 2642 .................................................. 2642
sh00483 4205 CAGCTGGGCTTTTTAACAACCTAGAGACTTTCCGGAGCTGCCTGGAACAG 4254
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mej02266 2642 .................................................. 2642
sh00483 4255 AGCCTGCGGGAAACGGGGCTTGCCAGAGACACTCACAGTTTCCTTCATGG 4304
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mej02266 2642 .................................................. 2642
sh00483 4305 CCTGTTTTGGTCCCCTAAGAATCTCCACATCATTGTCTTTCTTGTGCCTT 4354
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mej02266 2642 .................................................. 2642
sh00483 4355 TTCCTTGGTGAGCAACAGAAAGGGAAGGGTTCCAAGCCTCTAAAAATGTG 4404
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mej02266 2642 .................................................. 2642
sh00483 4405 CTTTGTGATCAGGAGTGCGCTCCAAACCAAATACGCGCGCTGCCCTTTCG 4454
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mej02266 2642 .................................................. 2642
sh00483 4455 AGGCCAGTGAGCTCAGCCTCCAAGGCTTTAAAGCCACATTTCAGCAAGAG 4504
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mej02266 2642 .................................................. 2642
sh00483 4505 AAAGCGCTGAGAGCTCGCAGGTTCATTAAAGAAGGCAAAGCACTGGTTTC 4554
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mej02266 2642 .................................................. 2642
sh00483 4555 TCTCCTTAGAAAAGTAGGTTTCTTGGCTTGATGTAGACTGGCTTGCTTTG 4604
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mej02266 2642 .................................................. 2642
sh00483 4605 ATTTTTAGTGAAGGGAATGTACGTAAAACAAAATAGGGCTTGGCTGGTCA 4654
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mej02266 2642 .................................................. 2642
sh00483 4655 AAGGAGACAAGCAGGATGGATGGATGGATGGATGGATGGATGGATGGATG 4704
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mej02266 2642 .................................................. 2642
sh00483 4705 GATGGATGGATGAATAGATAGATGGTGTTTGCATGTAAATTGCAGAGAAA 4754
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mej02266 2642 .................................................. 2642
sh00483 4755 ACAAAACCAAAGCTGATTGGAAACAATTAATTGTGGGTGTCTGAGGGGGA 4804
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mej02266 2642 .................................................. 2642
sh00483 4805 AGGTCGCAGCTTTGGGCAGCTTTGAGAAGCGGTACAAGAGTTCTGTGCCT 4854
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mej02266 2642 .................................................. 2642
sh00483 4855 GTGTGTCCAGCCCTGGAGCCAGCCAGTGCATTTATTTTAAGCTCTTAGAA 4904
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mej02266 2642 .................................................. 2642
sh00483 4905 GCAACTCCTTGGCCCAGGAATGCGTGACCCCTGAGATGGGTCCACGCATC 4954
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mej02266 2642 .................................................. 2642
sh00483 4955 TCTCTACACTTCCTTCTCTCCGTGGGATACTGGACTCGTGCCTCTGCGCC 5004
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mej02266 2642 .................................................. 2642
sh00483 5005 CATTCTCTTCTCACGCATATCCATGAGCTTTAATTTCACTTTCTGATCAC 5054
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mej02266 2642 .................................................. 2642
sh00483 5055 GGTACGTCCATAAAGCCAGTATTACACTTAAATGAAGTATTCTTTTTTGT 5104
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mej02266 2642 .................................................. 2642
sh00483 5105 AATCGTTTTTTTTAGAAGGTAAACAAATTTAATAAAGCTACCAATAATGT 5154
5201 -- 5202
mej02266 2642 .. 2642
sh00483 5155 TG 5156