FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA4090.ptfa, 483 aa vs ./tmplib.26680 library 1768534 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 3.7503+/-0.00442; mu= 21.4685+/- 0.297 mean_var=91.1893+/-20.502, 0's: 0 Z-trim: 4 B-trim: 41 in 1/35 Lambda= 0.1343 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0687 ( 1310 res) mpg00180 (1310) 2155 428 1.6e-120 mKIAA0551 ( 453 res) mbg05521 ( 453) 1650 330 2.7e-91 >>mKIAA0687 ( 1310 res) mpg00180 (1310 aa) initn: 2193 init1: 2069 opt: 2155 Z-score: 2256.0 bits: 428.3 E(): 1.6e-120 Smith-Waterman score: 2240; 71.343% identity (75.264% ungapped) in 499 aa overlap (9-483:814-1310) 10 20 30 mKIAA4 RGGGGRRWGDTDSVSTMVVHD-VEEISGTQPSYGGGTM :.:.::.::.::: :: . :: : . mKIAA0 EEEDVEQEGADDSTSGPEDTRAASSPNLSNGETESVKTMIVHDDVESEPAMTPSKEGTLI 790 800 810 820 830 840 40 50 60 70 mKIAA4 VVQRTPEEERSLLLADSNGYTN----LPDVVQPSHS--------------PTENSKGQSP : : : ...:. .:::... :::..: ::: :: . . :.: mKIAA0 VRQSTVDQKRASH-HESNGFAGRIHLLPDLLQQSHSSSTSSTSSSPSSSQPTPTMSPQTP 850 860 870 880 890 900 80 90 100 110 120 130 mKIAA4 PTKDGGSDYQSRG--LVKAPGKSSFTMFVDLGIYQPGGSGDTIPITALVG--GEGGRLDQ : ... :: . : : ..:::: :.: . : . :. : .:..:: .: : . mKIAA0 QDKLTANETQSASSTLQKHKSSSSFTPFIDPRLLQISPSSGTT-VTSVVGFSCDGLRPEA 910 920 930 940 950 960 140 150 160 170 180 190 mKIAA4 LQFD-VRKGSVVNVNPTNTRAHSETPEIRKYKKRFNSEILCAALWGVNLLVGTENGLMLL .. : .:::::::::::::: .:.::::::::::::::::::::::::::::::.::::: mKIAA0 IRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTESGLMLL 970 980 990 1000 1010 1020 200 210 220 230 240 250 mKIAA4 DRSGQGKVYGLIGRRRFQQMDVLEGLNLLITISGKRNKLRVYYLSWLRNKILHNDPEVEK ::::::::: ::.::::::::::::::.:.:::::..::::::::::::::::::::::: mKIAA0 DRSGQGKVYPLISRRRFQQMDVLEGLNVLVTISGKKDKLRVYYLSWLRNKILHNDPEVEK 1030 1040 1050 1060 1070 1080 260 270 280 290 300 310 mKIAA4 KQGWTTVGDMEGCGHYRVVKYERIKFLVIALKNSVEVYAWAPKPYHKFMAFKSFADLPHR :::::::::.::: ::.:::::::::::::::.:::::::::::::::::::::..: :. mKIAA0 KQGWTTVGDLEGCVHYKVVKYERIKFLVIALKSSVEVYAWAPKPYHKFMAFKSFGELLHK 1090 1100 1110 1120 1130 1140 320 330 340 350 360 370 mKIAA4 PLLVDLTVEEGQRLKVIYGSSAGFHAVDVDSGNSYDIYIPVHIQSQITPHAIIFLPNTDG :::::::::::::::::::: :::::::::::. ::::.:.::: .: :::::.:::::: mKIAA0 PLLVDLTVEEGQRLKVIYGSCAGFHAVDVDSGSVYDIYLPTHIQCSIKPHAIIILPNTDG 1150 1160 1170 1180 1190 1200 380 390 400 410 420 430 mKIAA4 MEMLLCYEDEGVYVNTYGRIIKDVVLQWGEMPTSVAYICSNQIMGWGEKAIETRSVETGH ::.:.::::::::::::::: ::::::::::::::::: ::: ::::::::: ::::::: mKIAA0 MELLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGH 1210 1220 1230 1240 1250 1260 440 450 460 470 480 mKIAA4 LDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVYFMTLNRNCIMNW :::::::::::::::::::::::::::::::::::::::::.:. ...: mKIAA0 LDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVYFMTLGRTSLLSW 1270 1280 1290 1300 1310 >>mKIAA0551 ( 453 res) mbg05521 (453 aa) initn: 1708 init1: 1641 opt: 1650 Z-score: 1731.4 bits: 329.7 E(): 2.7e-91 Smith-Waterman score: 1721; 69.309% identity (76.338% ungapped) in 391 aa overlap (31-412:90-453) 10 20 30 40 50 mKIAA4 RGGGGRRWGDTDSVSTMVVHDVEEISGTQPSYGG-----GTMVVQRTPEEERSLLLADSN ..:: ::.....: ::.. .::: mKIAA0 RLIPTGAPGNNEQYNMGMVGTHGLETSHADTFGGSISREGTLMIRETAEEKKRSGHSDSN 60 70 80 90 100 110 60 70 80 90 100 110 mKIAA4 GYT---NLPDVVQPSHSPTENSKGQSPPTKDGGSDYQSRGLVKAPGKSSFTMFVDLGIYQ :.. ::::.:: ::::. . ::. :: .. :. .. .: : . mKIAA0 GFAGHINLPDLVQQSHSPA------GTPTE---------GLGRV---STHSQEMDSGAES 120 130 140 150 160 120 130 140 150 160 170 mKIAA4 PGGSGDTIPITALVGGEGGRLDQLQFD-VRKGSVVNVNPTNTRAHSETPEIRKYKKRFNS . :: .: : .: ... .:: ::::::::: : ::.::::::::::::: mKIAA0 ---------LKALFTSELLRQEQAKLNEARKISVVNVNPTNIRPHSDTPEIRKYKKRFNS 170 180 190 200 210 180 190 200 210 220 230 mKIAA4 EILCAALWGVNLLVGTENGLMLLDRSGQGKVYGLIGRRRFQQMDVLEGLNLLITISGKRN ::::::::::::::::::::::::::::::::.::.::::::::::::::.:.:::::.: mKIAA0 EILCAALWGVNLLVGTENGLMLLDRSGQGKVYNLINRRRFQQMDVLEGLNVLVTISGKKN 220 230 240 250 260 270 240 250 260 270 280 290 mKIAA4 KLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDMEGCGHYRVVKYERIKFLVIALKNSVEV ::::::::::::.:::::::::::::: ::::.::: ::.::::::::::::::::.::. mKIAA0 KLRVYYLSWLRNRILHNDPEVEKKQGWITVGDLEGCIHYKVVKYERIKFLVIALKNAVEI 280 290 300 310 320 330 300 310 320 330 340 350 mKIAA4 YAWAPKPYHKFMAFKSFADLPHRPLLVDLTVEEGQRLKVIYGSSAGFHAVDVDSGNSYDI :::::::::::::::::::: :.:::::::::::::::::.:: .:::..:::::::::: mKIAA0 YAWAPKPYHKFMAFKSFADLQHKPLLVDLTVEEGQRLKVIFGSHTGFHVIDVDSGNSYDI 340 350 360 370 380 390 360 370 380 390 400 410 mKIAA4 YIPVHIQSQITPHAIIFLPNTDGMEMLLCYEDEGVYVNTYGRIIKDVVLQWGEMPTSVAY ::: :::..::::::..::.:::::::.::::::::::::::: ::::::::::::::. mKIAA0 YIPSHIQGNITPHAIVILPKTDGMEMLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVGR 400 410 420 430 440 450 420 430 440 450 460 470 mKIAA4 ICSNQIMGWGEKAIETRSVETGHLDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVY . mKIAA0 L 483 residues in 1 query sequences 1768534 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 11:01:34 2006 done: Mon Mar 27 11:01:35 2006 Scan time: 0.690 Display time: 0.050 Function used was FASTA [version 3.4t11 Apr 17, 2002]