# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/meh02016.fasta.nr -Q ../query/mKIAA1993.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mKIAA1993, 527 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7892570 sequences
Expectation_n fit: rho(ln(x))= 5.2274+/-0.000189; mu= 11.4564+/- 0.011
mean_var=78.3160+/-15.074, 0's: 34 Z-trim: 227 B-trim: 332 in 1/64
Lambda= 0.144927
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 37, opt: 25, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|123233619|emb|CAM23975.1| zinc finger and BTB d ( 518) 3493 740.0 3.7e-211
gi|109468060|ref|XP_001069858.1| PREDICTED: simila ( 544) 3379 716.2 5.8e-204
gi|114626820|ref|XP_001142000.1| PREDICTED: zinc f ( 681) 3192 677.2 4.1e-192
gi|73968201|ref|XP_548452.2| PREDICTED: similar to ( 520) 3177 673.9 2.9e-191
gi|190356056|sp|Q8NCN2.3|ZBT34_HUMAN RecName: Full ( 504) 3169 672.2 9e-191
gi|182888237|gb|AAI60177.1| Zinc finger and BTB do ( 500) 3161 670.6 2.9e-190
gi|194225839|ref|XP_001917307.1| PREDICTED: zinc f ( 500) 3160 670.4 3.3e-190
gi|194671262|ref|XP_596267.3| PREDICTED: similar t ( 502) 3105 658.9 9.6e-187
gi|224073995|ref|XP_002193994.1| PREDICTED: zinc f ( 499) 2939 624.2 2.7e-176
gi|60098537|emb|CAH65099.1| hypothetical protein [ ( 499) 2910 618.1 1.8e-174
gi|28279935|gb|AAH44333.1| MGC53639 protein [Xenop ( 490) 2529 538.4 1.7e-150
gi|224057022|ref|XP_002192538.1| PREDICTED: zinc f ( 503) 1263 273.7 8.3e-71
gi|149636159|ref|XP_001515481.1| PREDICTED: simila ( 503) 1247 270.4 8.5e-70
gi|76647983|ref|XP_874640.1| PREDICTED: similar to ( 503) 1242 269.3 1.8e-69
gi|149708144|ref|XP_001497335.1| PREDICTED: zinc f ( 503) 1241 269.1 2e-69
gi|26351325|dbj|BAC39299.1| unnamed protein produc ( 504) 1238 268.5 3.1e-69
gi|126306433|ref|XP_001373375.1| PREDICTED: simila ( 503) 1237 268.3 3.6e-69
gi|68566168|sp|Q5TC79.1|ZBT37_HUMAN RecName: Full= ( 503) 1234 267.7 5.6e-69
gi|109019595|ref|XP_001097255.1| PREDICTED: zinc f ( 503) 1234 267.7 5.6e-69
gi|74208185|dbj|BAE26310.1| unnamed protein produc ( 504) 1234 267.7 5.6e-69
gi|118094220|ref|XP_426629.2| PREDICTED: similar t ( 503) 1233 267.5 6.5e-69
gi|109731552|gb|AAI13764.1| Zinc finger and BTB do ( 504) 1232 267.2 7.5e-69
gi|149058272|gb|EDM09429.1| zinc finger and BTB do ( 504) 1231 267.0 8.6e-69
gi|73961343|ref|XP_547456.2| PREDICTED: similar to ( 503) 1229 266.6 1.2e-68
gi|221044206|dbj|BAH13780.1| unnamed protein produ ( 503) 1228 266.4 1.3e-68
gi|74201782|dbj|BAE28497.1| unnamed protein produc ( 504) 1226 266.0 1.8e-68
gi|94733736|emb|CAK05345.1| novel protein containi ( 521) 1199 260.4 9.1e-67
gi|26347455|dbj|BAC37376.1| unnamed protein produc ( 476) 1191 258.7 2.7e-66
gi|169159065|emb|CAQ14189.1| novel protein similar ( 508) 1107 241.1 5.5e-61
gi|16552952|dbj|BAB71422.1| unnamed protein produc ( 308) 665 148.5 2.5e-33
gi|47208944|emb|CAF90487.1| unnamed protein produc ( 695) 667 149.2 3.5e-33
gi|18027834|gb|AAL55878.1|AF318371_1 unknown [Homo ( 412) 663 148.2 4.2e-33
gi|56204639|emb|CAI19421.1| zinc finger and BTB do ( 308) 658 147.1 6.9e-33
gi|13111897|gb|AAH03116.1| Zinc finger and BTB dom ( 361) 658 147.1 7.8e-33
gi|73968203|ref|XP_851640.1| PREDICTED: similar to ( 493) 647 144.9 4.9e-32
gi|50757097|ref|XP_415377.1| PREDICTED: similar to ( 464) 639 143.2 1.5e-31
gi|26348134|dbj|BAB24254.2| unnamed protein produc ( 504) 638 143.1 1.8e-31
gi|148676652|gb|EDL08599.1| zinc finger protein 29 ( 504) 635 142.4 2.8e-31
gi|149738042|ref|XP_001501808.1| PREDICTED: simila ( 467) 629 141.1 6.3e-31
gi|56268839|gb|AAH87042.1| Zinc finger and BTB dom ( 503) 627 140.8 9e-31
gi|30923375|sp|Q9DAI4.2|ZBT43_MOUSE RecName: Full= ( 467) 620 139.3 2.3e-30
gi|74190705|dbj|BAE28151.1| unnamed protein produc ( 467) 620 139.3 2.3e-30
gi|23396976|sp|O43298.1|ZBT43_HUMAN RecName: Full= ( 467) 619 139.1 2.7e-30
gi|30585401|gb|AAP36973.1| Homo sapiens zinc finge ( 468) 619 139.1 2.7e-30
gi|109112186|ref|XP_001097208.1| PREDICTED: zinc f ( 467) 617 138.6 3.6e-30
gi|111309047|gb|AAI21446.1| Zinc finger and BTB do ( 465) 614 138.0 5.6e-30
gi|61554136|gb|AAX46513.1| zinc finger protein 297 ( 498) 614 138.0 5.8e-30
gi|149038968|gb|EDL93188.1| rCG45758, isoform CRA_ ( 467) 612 137.6 7.4e-30
gi|126309700|ref|XP_001376349.1| PREDICTED: hypoth ( 477) 514 117.1 1.1e-23
gi|74140260|dbj|BAE33827.1| unnamed protein produc ( 474) 468 107.5 8.7e-21
>>gi|123233619|emb|CAM23975.1| zinc finger and BTB domai (518 aa)
initn: 3493 init1: 3493 opt: 3493 Z-score: 3947.2 bits: 740.0 E(): 3.7e-211
Smith-Waterman score: 3493; 100.000% identity (100.000% similar) in 518 aa overlap (10-527:1-518)
10 20 30 40 50 60
mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD
:::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 MESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD
10 20 30 40 50
70 80 90 100 110 120
mKIAA1 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS
60 70 80 90 100 110
130 140 150 160 170 180
mKIAA1 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD
120 130 140 150 160 170
190 200 210 220 230 240
mKIAA1 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEI
180 190 200 210 220 230
250 260 270 280 290 300
mKIAA1 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG
240 250 260 270 280 290
310 320 330 340 350 360
mKIAA1 AYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 AYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSD
300 310 320 330 340 350
370 380 390 400 410 420
mKIAA1 LQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 LQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRL
360 370 380 390 400 410
430 440 450 460 470 480
mKIAA1 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNHPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|123 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNHPG
420 430 440 450 460 470
490 500 510 520
mKIAA1 VTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD
:::::::::::::::::::::::::::::::::::::::::::::::
gi|123 VTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD
480 490 500 510
>>gi|109468060|ref|XP_001069858.1| PREDICTED: similar to (544 aa)
initn: 3371 init1: 3371 opt: 3379 Z-score: 3818.1 bits: 716.2 E(): 5.8e-204
Smith-Waterman score: 3379; 97.652% identity (99.413% similar) in 511 aa overlap (17-527:34-544)
10 20 30 40
mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVL
: :::.::::::.::::::::::::::::
gi|109 QTLVLATESQRAPFMLLALVEEPWRITGALCLCRLRLVSGEMDSSSFIQFDVPEHSSTVL
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA1 SQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 SQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSV
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA1 FEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 FEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTI
130 140 150 160 170 180
170 180 190 200 210 220
mKIAA1 GAEENPESRNGVKDGSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGH
::::.::::::::::::::.::::::::::::::::::::::::::::::::::::::::
gi|109 GAEETPESRNGVKDGSFFTSPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGH
190 200 210 220 230 240
230 240 250 260 270 280
mKIAA1 SDRGSSGSVSEYEIQIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHT
:::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::
gi|109 SDRGSSGSVSEYEVQIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHT
250 260 270 280 290 300
290 300 310 320 330 340
mKIAA1 EMVDGEQVVAVNVGAYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRG
::::::::::::::.:::::::::::::.:::::::::::::::::::::::::::::::
gi|109 EMVDGEQVVAVNVGTYGSVLQHAYPYSQAASQPSSVPEAFGGQTNSSPSRSMLSCFRGRG
310 320 330 340 350 360
350 360 370 380 390 400
mKIAA1 ARQKRALSVHLHSDLQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 ARQKRALSVHLHSDLQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGK
370 380 390 400 410 420
410 420 430 440 450 460
mKIAA1 SFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 SFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPF
430 440 450 460 470 480
470 480 490 500 510 520
mKIAA1 QGTLNQHLRKNHPGVTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAP
:::::::::::::::::::::::::::::.: ::::::::::::::::::::.:::::::
gi|109 QGTLNQHLRKNHPGVTEGRGRMESPERTDVYGEQKLESDASASEMALDSRLEIHTVSDAP
490 500 510 520 530 540
mKIAA1 D
:
gi|109 D
>>gi|114626820|ref|XP_001142000.1| PREDICTED: zinc finge (681 aa)
initn: 3192 init1: 3192 opt: 3192 Z-score: 3605.5 bits: 677.2 E(): 4.1e-192
Smith-Waterman score: 3192; 92.717% identity (98.031% similar) in 508 aa overlap (20-527:174-681)
10 20 30 40
mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQL
:.::.: :::.::::::::::.::::::::
gi|114 GGSRSGGDGPGAGGGGGGAAGGRCERGALGRVRFMSVEMDSSSFIQFDVPEYSSTVLSQL
150 160 170 180 190 200
50 60 70 80 90 100
mKIAA1 NELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
gi|114 NELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQ
210 220 230 240 250 260
110 120 130 140 150 160
mKIAA1 LLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
gi|114 LLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAE
270 280 290 300 310 320
170 180 190 200 210 220
mKIAA1 ENPESRNGVKDGSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDR
:::::::::::.:::.:::::::::: : ::: .::::::::::.:::::::::::::::
gi|114 ENPESRNGVKDSSFFANPVEISPPYCSQGRQPTASSDLRMETTPSKALRSRLQEEGHSDR
330 340 350 360 370 380
230 240 250 260 270 280
mKIAA1 GSSGSVSEYEIQIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 GSSGSVSEYEIQIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMV
390 400 410 420 430 440
290 300 310 320 330 340
mKIAA1 DGEQVVAVNVGAYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQ
:::::::::::.::::::::: :::.::::..: ::::. .:::::::::::::: :::
gi|114 DGEQVVAVNVGSYGSVLQHAYSYSQAASQPTNVSEAFGSLSNSSPSRSMLSCFRGGRARQ
450 460 470 480 490 500
350 360 370 380 390 400
mKIAA1 KRALSVHLHSDLQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFN
::::::::::::::.::::::::::::::::::::::::::.::::::::::::::::::
gi|114 KRALSVHLHSDLQGLVQGSDSEAMMNNPGYESSPRERSARGHWYPYNERLICIYCGKSFN
510 520 530 540 550 560
410 420 430 440 450 460
mKIAA1 QKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGT
:::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
gi|114 QKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGT
570 580 590 600 610 620
470 480 490 500 510 520
mKIAA1 LNQHLRKNHPGVTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD
::::::::::::.: :.:.:::::::.:::::::.:::::::.::::.:.::::::::
gi|114 LNQHLRKNHPGVAEVRSRIESPERTDVYVEQKLENDASASEMGLDSRMEIHTVSDAPD
630 640 650 660 670 680
>>gi|73968201|ref|XP_548452.2| PREDICTED: similar to Zin (520 aa)
initn: 3177 init1: 3177 opt: 3177 Z-score: 3590.1 bits: 673.9 E(): 2.9e-191
Smith-Waterman score: 3177; 92.520% identity (97.638% similar) in 508 aa overlap (20-527:13-520)
10 20 30 40 50 60
mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD
::::.: :::.::::::::::.:::::::::::::::::::
gi|739 MSKRKNAQVDPRRLRFMSVEMDSSSFIQFDVPEYSSTVLSQLNELRLQGKLCD
10 20 30 40 50
70 80 90 100 110 120
mKIAA1 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
gi|739 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMS
60 70 80 90 100 110
130 140 150 160 170 180
mKIAA1 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD
:::::::::::::::::::::::::::::::::::::::::::::.:::: ::::::::
gi|739 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEEATESRNGVKD
120 130 140 150 160 170
190 200 210 220 230 240
mKIAA1 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEI
.:::.:::::::::: : ::: .::::::::::.::::::::::::::::::::::::::
gi|739 SSFFANPVEISPPYCSQGRQPTTSSDLRMETTPSKALRSRLQEEGHSDRGSSGSVSEYEI
180 190 200 210 220 230
250 260 270 280 290 300
mKIAA1 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG
240 250 260 270 280 290
310 320 330 340 350 360
mKIAA1 AYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSD
.::::::::: :::.::::..: ::::. .:::::::::::::: ::::::::::::::
gi|739 SYGSVLQHAYSYSQAASQPTGVSEAFGSLSNSSPSRSMLSCFRGGRARQKRALSVHLHSD
300 310 320 330 340 350
370 380 390 400 410 420
mKIAA1 LQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRL
:::.::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
gi|739 LQGLVQGSDSEAMMNNPGYESSPRERSARGHWYPYNERLICIYCGKSFNQKGSLDRHMRL
360 370 380 390 400 410
430 440 450 460 470 480
mKIAA1 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNHPG
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
gi|739 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPG
420 430 440 450 460 470
490 500 510 520
mKIAA1 VTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD
:.: :.:.:::::::.:.:::::.::::::::::::.:.::::::::
gi|739 VAEVRSRIESPERTDVYMEQKLENDASASEMALDSRMEIHTVSDAPD
480 490 500 510 520
>>gi|190356056|sp|Q8NCN2.3|ZBT34_HUMAN RecName: Full=Zin (504 aa)
initn: 3169 init1: 3169 opt: 3169 Z-score: 3581.2 bits: 672.2 E(): 9e-191
Smith-Waterman score: 3169; 92.857% identity (98.016% similar) in 504 aa overlap (24-527:1-504)
10 20 30 40 50 60
mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD
.: :::.::::::::::.:::::::::::::::::::
gi|190 MSVEMDSSSFIQFDVPEYSSTVLSQLNELRLQGKLCD
10 20 30
70 80 90 100 110 120
mKIAA1 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
gi|190 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA1 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
gi|190 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEENPESRNGVKD
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA1 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEI
.:::.:::::::::: : ::: .::::::::::.::::::::::::::::::::::::::
gi|190 SSFFANPVEISPPYCSQGRQPTASSDLRMETTPSKALRSRLQEEGHSDRGSSGSVSEYEI
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA1 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|190 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA1 AYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSD
.::::::::: :::.::::..: ::::. .:::::::::::::: ::::::::::::::
gi|190 SYGSVLQHAYSYSQAASQPTNVSEAFGSLSNSSPSRSMLSCFRGGRARQKRALSVHLHSD
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA1 LQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRL
:::.::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
gi|190 LQGLVQGSDSEAMMNNPGYESSPRERSARGHWYPYNERLICIYCGKSFNQKGSLDRHMRL
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA1 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNHPG
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
gi|190 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPG
400 410 420 430 440 450
490 500 510 520
mKIAA1 VTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD
:.: :.:.:::::::.:::::::.:::::::.::::.:.::::::::
gi|190 VAEVRSRIESPERTDVYVEQKLENDASASEMGLDSRMEIHTVSDAPD
460 470 480 490 500
>>gi|182888237|gb|AAI60177.1| Zinc finger and BTB domain (500 aa)
initn: 3161 init1: 3161 opt: 3161 Z-score: 3572.2 bits: 670.6 E(): 2.9e-190
Smith-Waterman score: 3161; 93.200% identity (98.200% similar) in 500 aa overlap (28-527:1-500)
10 20 30 40 50 60
mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD
::.::::::::::.:::::::::::::::::::
gi|182 MDSSSFIQFDVPEYSSTVLSQLNELRLQGKLCD
10 20 30
70 80 90 100 110 120
mKIAA1 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
gi|182 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA1 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD
:::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::
gi|182 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEENPESRNGVKD
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA1 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEI
.:::.:::::::::: : ::: .::::::::::.::::::::::::::::::::::::::
gi|182 SSFFANPVEISPPYCSQGRQPTASSDLRMETTPSKALRSRLQEEGHSDRGSSGSVSEYEI
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA1 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|182 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA1 AYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSD
.::::::::: :::.::::..: ::::. .:::::::::::::: ::::::::::::::
gi|182 SYGSVLQHAYSYSQAASQPTNVSEAFGSLSNSSPSRSMLSCFRGGRARQKRALSVHLHSD
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA1 LQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRL
:::.::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
gi|182 LQGLVQGSDSEAMMNNPGYESSPRERSARGHWYPYNERLICIYCGKSFNQKGSLDRHMRL
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA1 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNHPG
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
gi|182 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPG
400 410 420 430 440 450
490 500 510 520
mKIAA1 VTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD
:.: :.:.:::::::.:::::::.:::::::.::::.:.::::::::
gi|182 VAEVRSRIESPERTDVYVEQKLENDASASEMGLDSRMEIHTVSDAPD
460 470 480 490 500
>>gi|194225839|ref|XP_001917307.1| PREDICTED: zinc finge (500 aa)
initn: 3160 init1: 3160 opt: 3160 Z-score: 3571.1 bits: 670.4 E(): 3.3e-190
Smith-Waterman score: 3160; 93.400% identity (98.200% similar) in 500 aa overlap (28-527:1-500)
10 20 30 40 50 60
mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD
::.::::::::::.:::::::::::::::::::
gi|194 MDSSSFIQFDVPEYSSTVLSQLNELRLQGKLCD
10 20 30
70 80 90 100 110 120
mKIAA1 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
gi|194 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA1 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD
:::::::::::::::::::::::::::::::::::::::::::::.::::.:::::::::
gi|194 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEETPESRNGVKD
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA1 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEI
.:::.:::::::::: ::::: .:.::::::: .::::::::::::::::::::::::::
gi|194 SSFFANPVEISPPYCSQVRQPTTSGDLRMETTSSKALRSRLQEEGHSDRGSSGSVSEYEI
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA1 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA1 AYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSD
.::::::::: :::.::::::: ::::. .:::::::::::::: ::::::::::::::
gi|194 SYGSVLQHAYSYSQAASQPSSVSEAFGSLSNSSPSRSMLSCFRGGRARQKRALSVHLHSD
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA1 LQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRL
:::.::::::::.:::::::::::::::::.:::::::::::::::::::::::::::::
gi|194 LQGLVQGSDSEALMNNPGYESSPRERSARGHWYPYNERLICIYCGKSFNQKGSLDRHMRL
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA1 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNHPG
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
gi|194 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPG
400 410 420 430 440 450
490 500 510 520
mKIAA1 VTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD
:.: :.:::::::::.:::::::.::::::::::::.:.::::::::
gi|194 VAEVRSRMESPERTDVYVEQKLENDASASEMALDSRMEIHTVSDAPD
460 470 480 490 500
>>gi|194671262|ref|XP_596267.3| PREDICTED: similar to zi (502 aa)
initn: 3108 init1: 1320 opt: 3105 Z-score: 3508.9 bits: 658.9 E(): 9.6e-187
Smith-Waterman score: 3105; 91.833% identity (97.610% similar) in 502 aa overlap (28-527:1-502)
10 20 30 40 50 60
mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD
::.::::::::::.:::::::::::::::::::
gi|194 MDSSSFIQFDVPEYSSTVLSQLNELRLQGKLCD
10 20 30
70 80 90 100 110 120
mKIAA1 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
gi|194 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA1 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD
:::::::::::::::::::::::::::::::::::::::::::::.::::.:::::::::
gi|194 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEETPESRNGVKD
100 110 120 130 140 150
190 200 210 220 230
mKIAA1 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRS-RLQEEGHSDRGSSGSVSEYE
.:::.:::::::::: ::::: .::::::::::.::::: ::::::::::::::::::::
gi|194 SSFFANPVEISPPYCSQVRQPTTSSDLRMETTPSKALRSSRLQEEGHSDRGSSGSVSEYE
160 170 180 190 200 210
240 250 260 270 280 290
mKIAA1 IQIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNV
::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::
gi|194 IQIEGDHEQGDLLGRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNV
220 230 240 250 260 270
300 310 320 330 340 350
mKIAA1 GAYGSVLQHAYPYSQTASQPSS-VPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLH
:.::::::::: : :.::::.. : ::::. .:::::::::::::: ::::::::::::
gi|194 GSYGSVLQHAYSYCQAASQPAGGVSEAFGSLSNSSPSRSMLSCFRGGRARQKRALSVHLH
280 290 300 310 320 330
360 370 380 390 400 410
mKIAA1 SDLQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHM
:::::.::::::::...:::.:::::::::::.:::::::::::::::::::::::::::
gi|194 SDLQGLVQGSDSEAVVSNPGFESSPRERSARGHWYPYNERLICIYCGKSFNQKGSLDRHM
340 350 360 370 380 390
420 430 440 450 460 470
mKIAA1 RLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNH
::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::
gi|194 RLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNH
400 410 420 430 440 450
480 490 500 510 520
mKIAA1 PGVTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD
:::.: :.:::::::::.:.:::::.::::::::::::.:.::::::::
gi|194 PGVAEVRSRMESPERTDVYAEQKLENDASASEMALDSRMEIHTVSDAPD
460 470 480 490 500
>>gi|224073995|ref|XP_002193994.1| PREDICTED: zinc finge (499 aa)
initn: 2890 init1: 2890 opt: 2939 Z-score: 3321.4 bits: 624.2 E(): 2.7e-176
Smith-Waterman score: 2939; 85.200% identity (96.600% similar) in 500 aa overlap (28-527:1-499)
10 20 30 40 50 60
mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD
::.::::::::::.:.:::::::::::::::::
gi|224 MDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCD
10 20 30
70 80 90 100 110 120
mKIAA1 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
gi|224 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA1 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD
:::::::::::::::::::::::::::::::::::::::::::::.::::: :.::::::
gi|224 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEENSENRNGVKD
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA1 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEI
.:.:.::.::::::: :::: ..:::::::::.::::::::::::::::::::.:::::
gi|224 SSYFANPIEISPPYCSQVRQSTAGSDLRMETTPGKALRSRLQEEGHSDRGSSGSISEYEI
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA1 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG
::::::: :::.::::::.:::::::::::::::::::::::::::::::::::::::::
gi|224 QIEGDHEPGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA1 AYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSD
.:::::::.: .....:: ... :.::...:.:::::::::::: :::::. . :::::
gi|224 SYGSVLQHVYSFTHASSQATGASETFGSMSNTSPSRSMLSCFRGGRARQKRVPTGHLHSD
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA1 LQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRL
.::.:::.:::.:..:::::.:::::.:::.:::::::::::::::::::::::::::::
gi|224 VQGLVQGADSESMVSNPGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRL
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA1 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNHPG
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
gi|224 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPG
400 410 420 430 440 450
490 500 510 520
mKIAA1 VTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD
::: :.:.:::.::. .::::...:::::: :.:: .:.:..:.: :
gi|224 VTEVRNRVESPDRTEAFVEQKVDNDASASE-AMDSSMEIHAMSNASD
460 470 480 490
>>gi|60098537|emb|CAH65099.1| hypothetical protein [Gall (499 aa)
initn: 2871 init1: 2871 opt: 2910 Z-score: 3288.6 bits: 618.1 E(): 1.8e-174
Smith-Waterman score: 2910; 84.200% identity (96.000% similar) in 500 aa overlap (28-527:1-499)
10 20 30 40 50 60
mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD
::.::::::::::.:.::::::::::::::::
gi|600 MDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCG
10 20 30
70 80 90 100 110 120
mKIAA1 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
gi|600 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA1 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD
:::::::::::::::::::::::::::::::::::::::::::::.::::: :.::::::
gi|600 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEENSENRNGVKD
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA1 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEI
.:.:.::.::::::: :::: .::::::::::.:.::::::::::::::::::.::::.
gi|600 SSYFANPIEISPPYCSQVRQSTASSDLRMETTPGKTLRSRLQEEGHSDRGSSGSISEYEV
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA1 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG
:::::::::::.::::::.:::::::::::::::::::::::::::::::::::::::::
gi|600 QIEGDHEQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA1 AYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSD
.:::::::.: .....:: ..: :.::. .:::::::::::::: ::::: . :::.:
gi|600 SYGSVLQHVYSFTHASSQATGVSETFGNLSNSSPSRSMLSCFRGGRARQKRISAGHLHTD
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA1 LQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRL
.::.:::.:...:..: :::.:::::.:::.:::::::::::::::::::::::::::::
gi|600 VQGLVQGTDGDSMVSNTGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRL
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA1 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNHPG
::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::
gi|600 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPG
400 410 420 430 440 450
490 500 510 520
mKIAA1 VTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD
::: :.:.:::.::. .::::...:::::: ..:: .:.:..:.. :
gi|600 VTEVRNRVESPDRTEAFVEQKVDNDASASE-TMDSSMEIHAMSNTSD
460 470 480 490
527 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Mon Mar 16 16:35:42 2009 done: Mon Mar 16 16:42:51 2009
Total Scan time: 959.170 Total Display time: 0.160
Function used was FASTA [version 34.26.5 April 26, 2007]