# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/meh02016.fasta.nr -Q ../query/mKIAA1993.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1993, 527 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7892570 sequences Expectation_n fit: rho(ln(x))= 5.2274+/-0.000189; mu= 11.4564+/- 0.011 mean_var=78.3160+/-15.074, 0's: 34 Z-trim: 227 B-trim: 332 in 1/64 Lambda= 0.144927 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|123233619|emb|CAM23975.1| zinc finger and BTB d ( 518) 3493 740.0 3.7e-211 gi|109468060|ref|XP_001069858.1| PREDICTED: simila ( 544) 3379 716.2 5.8e-204 gi|114626820|ref|XP_001142000.1| PREDICTED: zinc f ( 681) 3192 677.2 4.1e-192 gi|73968201|ref|XP_548452.2| PREDICTED: similar to ( 520) 3177 673.9 2.9e-191 gi|190356056|sp|Q8NCN2.3|ZBT34_HUMAN RecName: Full ( 504) 3169 672.2 9e-191 gi|182888237|gb|AAI60177.1| Zinc finger and BTB do ( 500) 3161 670.6 2.9e-190 gi|194225839|ref|XP_001917307.1| PREDICTED: zinc f ( 500) 3160 670.4 3.3e-190 gi|194671262|ref|XP_596267.3| PREDICTED: similar t ( 502) 3105 658.9 9.6e-187 gi|224073995|ref|XP_002193994.1| PREDICTED: zinc f ( 499) 2939 624.2 2.7e-176 gi|60098537|emb|CAH65099.1| hypothetical protein [ ( 499) 2910 618.1 1.8e-174 gi|28279935|gb|AAH44333.1| MGC53639 protein [Xenop ( 490) 2529 538.4 1.7e-150 gi|224057022|ref|XP_002192538.1| PREDICTED: zinc f ( 503) 1263 273.7 8.3e-71 gi|149636159|ref|XP_001515481.1| PREDICTED: simila ( 503) 1247 270.4 8.5e-70 gi|76647983|ref|XP_874640.1| PREDICTED: similar to ( 503) 1242 269.3 1.8e-69 gi|149708144|ref|XP_001497335.1| PREDICTED: zinc f ( 503) 1241 269.1 2e-69 gi|26351325|dbj|BAC39299.1| unnamed protein produc ( 504) 1238 268.5 3.1e-69 gi|126306433|ref|XP_001373375.1| PREDICTED: simila ( 503) 1237 268.3 3.6e-69 gi|68566168|sp|Q5TC79.1|ZBT37_HUMAN RecName: Full= ( 503) 1234 267.7 5.6e-69 gi|109019595|ref|XP_001097255.1| PREDICTED: zinc f ( 503) 1234 267.7 5.6e-69 gi|74208185|dbj|BAE26310.1| unnamed protein produc ( 504) 1234 267.7 5.6e-69 gi|118094220|ref|XP_426629.2| PREDICTED: similar t ( 503) 1233 267.5 6.5e-69 gi|109731552|gb|AAI13764.1| Zinc finger and BTB do ( 504) 1232 267.2 7.5e-69 gi|149058272|gb|EDM09429.1| zinc finger and BTB do ( 504) 1231 267.0 8.6e-69 gi|73961343|ref|XP_547456.2| PREDICTED: similar to ( 503) 1229 266.6 1.2e-68 gi|221044206|dbj|BAH13780.1| unnamed protein produ ( 503) 1228 266.4 1.3e-68 gi|74201782|dbj|BAE28497.1| unnamed protein produc ( 504) 1226 266.0 1.8e-68 gi|94733736|emb|CAK05345.1| novel protein containi ( 521) 1199 260.4 9.1e-67 gi|26347455|dbj|BAC37376.1| unnamed protein produc ( 476) 1191 258.7 2.7e-66 gi|169159065|emb|CAQ14189.1| novel protein similar ( 508) 1107 241.1 5.5e-61 gi|16552952|dbj|BAB71422.1| unnamed protein produc ( 308) 665 148.5 2.5e-33 gi|47208944|emb|CAF90487.1| unnamed protein produc ( 695) 667 149.2 3.5e-33 gi|18027834|gb|AAL55878.1|AF318371_1 unknown [Homo ( 412) 663 148.2 4.2e-33 gi|56204639|emb|CAI19421.1| zinc finger and BTB do ( 308) 658 147.1 6.9e-33 gi|13111897|gb|AAH03116.1| Zinc finger and BTB dom ( 361) 658 147.1 7.8e-33 gi|73968203|ref|XP_851640.1| PREDICTED: similar to ( 493) 647 144.9 4.9e-32 gi|50757097|ref|XP_415377.1| PREDICTED: similar to ( 464) 639 143.2 1.5e-31 gi|26348134|dbj|BAB24254.2| unnamed protein produc ( 504) 638 143.1 1.8e-31 gi|148676652|gb|EDL08599.1| zinc finger protein 29 ( 504) 635 142.4 2.8e-31 gi|149738042|ref|XP_001501808.1| PREDICTED: simila ( 467) 629 141.1 6.3e-31 gi|56268839|gb|AAH87042.1| Zinc finger and BTB dom ( 503) 627 140.8 9e-31 gi|30923375|sp|Q9DAI4.2|ZBT43_MOUSE RecName: Full= ( 467) 620 139.3 2.3e-30 gi|74190705|dbj|BAE28151.1| unnamed protein produc ( 467) 620 139.3 2.3e-30 gi|23396976|sp|O43298.1|ZBT43_HUMAN RecName: Full= ( 467) 619 139.1 2.7e-30 gi|30585401|gb|AAP36973.1| Homo sapiens zinc finge ( 468) 619 139.1 2.7e-30 gi|109112186|ref|XP_001097208.1| PREDICTED: zinc f ( 467) 617 138.6 3.6e-30 gi|111309047|gb|AAI21446.1| Zinc finger and BTB do ( 465) 614 138.0 5.6e-30 gi|61554136|gb|AAX46513.1| zinc finger protein 297 ( 498) 614 138.0 5.8e-30 gi|149038968|gb|EDL93188.1| rCG45758, isoform CRA_ ( 467) 612 137.6 7.4e-30 gi|126309700|ref|XP_001376349.1| PREDICTED: hypoth ( 477) 514 117.1 1.1e-23 gi|74140260|dbj|BAE33827.1| unnamed protein produc ( 474) 468 107.5 8.7e-21 >>gi|123233619|emb|CAM23975.1| zinc finger and BTB domai (518 aa) initn: 3493 init1: 3493 opt: 3493 Z-score: 3947.2 bits: 740.0 E(): 3.7e-211 Smith-Waterman score: 3493; 100.000% identity (100.000% similar) in 518 aa overlap (10-527:1-518) 10 20 30 40 50 60 mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 MESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEI 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 AYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 AYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSD 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 LQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRL 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNHPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNHPG 420 430 440 450 460 470 490 500 510 520 mKIAA1 VTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD ::::::::::::::::::::::::::::::::::::::::::::::: gi|123 VTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD 480 490 500 510 >>gi|109468060|ref|XP_001069858.1| PREDICTED: similar to (544 aa) initn: 3371 init1: 3371 opt: 3379 Z-score: 3818.1 bits: 716.2 E(): 5.8e-204 Smith-Waterman score: 3379; 97.652% identity (99.413% similar) in 511 aa overlap (17-527:34-544) 10 20 30 40 mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVL : :::.::::::.:::::::::::::::: gi|109 QTLVLATESQRAPFMLLALVEEPWRITGALCLCRLRLVSGEMDSSSFIQFDVPEHSSTVL 10 20 30 40 50 60 50 60 70 80 90 100 mKIAA1 SQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSV 70 80 90 100 110 120 110 120 130 140 150 160 mKIAA1 FEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTI 130 140 150 160 170 180 170 180 190 200 210 220 mKIAA1 GAEENPESRNGVKDGSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGH ::::.::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|109 GAEETPESRNGVKDGSFFTSPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGH 190 200 210 220 230 240 230 240 250 260 270 280 mKIAA1 SDRGSSGSVSEYEIQIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHT :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|109 SDRGSSGSVSEYEVQIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHT 250 260 270 280 290 300 290 300 310 320 330 340 mKIAA1 EMVDGEQVVAVNVGAYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRG ::::::::::::::.:::::::::::::.::::::::::::::::::::::::::::::: gi|109 EMVDGEQVVAVNVGTYGSVLQHAYPYSQAASQPSSVPEAFGGQTNSSPSRSMLSCFRGRG 310 320 330 340 350 360 350 360 370 380 390 400 mKIAA1 ARQKRALSVHLHSDLQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ARQKRALSVHLHSDLQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGK 370 380 390 400 410 420 410 420 430 440 450 460 mKIAA1 SFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPF 430 440 450 460 470 480 470 480 490 500 510 520 mKIAA1 QGTLNQHLRKNHPGVTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAP :::::::::::::::::::::::::::::.: ::::::::::::::::::::.::::::: gi|109 QGTLNQHLRKNHPGVTEGRGRMESPERTDVYGEQKLESDASASEMALDSRLEIHTVSDAP 490 500 510 520 530 540 mKIAA1 D : gi|109 D >>gi|114626820|ref|XP_001142000.1| PREDICTED: zinc finge (681 aa) initn: 3192 init1: 3192 opt: 3192 Z-score: 3605.5 bits: 677.2 E(): 4.1e-192 Smith-Waterman score: 3192; 92.717% identity (98.031% similar) in 508 aa overlap (20-527:174-681) 10 20 30 40 mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQL :.::.: :::.::::::::::.:::::::: gi|114 GGSRSGGDGPGAGGGGGGAAGGRCERGALGRVRFMSVEMDSSSFIQFDVPEYSSTVLSQL 150 160 170 180 190 200 50 60 70 80 90 100 mKIAA1 NELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|114 NELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQ 210 220 230 240 250 260 110 120 130 140 150 160 mKIAA1 LLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|114 LLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAE 270 280 290 300 310 320 170 180 190 200 210 220 mKIAA1 ENPESRNGVKDGSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDR :::::::::::.:::.:::::::::: : ::: .::::::::::.::::::::::::::: gi|114 ENPESRNGVKDSSFFANPVEISPPYCSQGRQPTASSDLRMETTPSKALRSRLQEEGHSDR 330 340 350 360 370 380 230 240 250 260 270 280 mKIAA1 GSSGSVSEYEIQIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GSSGSVSEYEIQIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMV 390 400 410 420 430 440 290 300 310 320 330 340 mKIAA1 DGEQVVAVNVGAYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQ :::::::::::.::::::::: :::.::::..: ::::. .:::::::::::::: ::: gi|114 DGEQVVAVNVGSYGSVLQHAYSYSQAASQPTNVSEAFGSLSNSSPSRSMLSCFRGGRARQ 450 460 470 480 490 500 350 360 370 380 390 400 mKIAA1 KRALSVHLHSDLQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFN ::::::::::::::.::::::::::::::::::::::::::.:::::::::::::::::: gi|114 KRALSVHLHSDLQGLVQGSDSEAMMNNPGYESSPRERSARGHWYPYNERLICIYCGKSFN 510 520 530 540 550 560 410 420 430 440 450 460 mKIAA1 QKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGT :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|114 QKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGT 570 580 590 600 610 620 470 480 490 500 510 520 mKIAA1 LNQHLRKNHPGVTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD ::::::::::::.: :.:.:::::::.:::::::.:::::::.::::.:.:::::::: gi|114 LNQHLRKNHPGVAEVRSRIESPERTDVYVEQKLENDASASEMGLDSRMEIHTVSDAPD 630 640 650 660 670 680 >>gi|73968201|ref|XP_548452.2| PREDICTED: similar to Zin (520 aa) initn: 3177 init1: 3177 opt: 3177 Z-score: 3590.1 bits: 673.9 E(): 2.9e-191 Smith-Waterman score: 3177; 92.520% identity (97.638% similar) in 508 aa overlap (20-527:13-520) 10 20 30 40 50 60 mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD ::::.: :::.::::::::::.::::::::::::::::::: gi|739 MSKRKNAQVDPRRLRFMSVEMDSSSFIQFDVPEYSSTVLSQLNELRLQGKLCD 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|739 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMS 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD :::::::::::::::::::::::::::::::::::::::::::::.:::: :::::::: gi|739 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEEATESRNGVKD 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEI .:::.:::::::::: : ::: .::::::::::.:::::::::::::::::::::::::: gi|739 SSFFANPVEISPPYCSQGRQPTTSSDLRMETTPSKALRSRLQEEGHSDRGSSGSVSEYEI 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 AYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSD .::::::::: :::.::::..: ::::. .:::::::::::::: :::::::::::::: gi|739 SYGSVLQHAYSYSQAASQPTGVSEAFGSLSNSSPSRSMLSCFRGGRARQKRALSVHLHSD 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 LQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRL :::.::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|739 LQGLVQGSDSEAMMNNPGYESSPRERSARGHWYPYNERLICIYCGKSFNQKGSLDRHMRL 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNHPG ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|739 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPG 420 430 440 450 460 470 490 500 510 520 mKIAA1 VTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD :.: :.:.:::::::.:.:::::.::::::::::::.:.:::::::: gi|739 VAEVRSRIESPERTDVYMEQKLENDASASEMALDSRMEIHTVSDAPD 480 490 500 510 520 >>gi|190356056|sp|Q8NCN2.3|ZBT34_HUMAN RecName: Full=Zin (504 aa) initn: 3169 init1: 3169 opt: 3169 Z-score: 3581.2 bits: 672.2 E(): 9e-191 Smith-Waterman score: 3169; 92.857% identity (98.016% similar) in 504 aa overlap (24-527:1-504) 10 20 30 40 50 60 mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD .: :::.::::::::::.::::::::::::::::::: gi|190 MSVEMDSSSFIQFDVPEYSSTVLSQLNELRLQGKLCD 10 20 30 70 80 90 100 110 120 mKIAA1 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|190 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|190 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEENPESRNGVKD 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEI .:::.:::::::::: : ::: .::::::::::.:::::::::::::::::::::::::: gi|190 SSFFANPVEISPPYCSQGRQPTASSDLRMETTPSKALRSRLQEEGHSDRGSSGSVSEYEI 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 AYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSD .::::::::: :::.::::..: ::::. .:::::::::::::: :::::::::::::: gi|190 SYGSVLQHAYSYSQAASQPTNVSEAFGSLSNSSPSRSMLSCFRGGRARQKRALSVHLHSD 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 LQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRL :::.::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|190 LQGLVQGSDSEAMMNNPGYESSPRERSARGHWYPYNERLICIYCGKSFNQKGSLDRHMRL 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNHPG ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|190 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPG 400 410 420 430 440 450 490 500 510 520 mKIAA1 VTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD :.: :.:.:::::::.:::::::.:::::::.::::.:.:::::::: gi|190 VAEVRSRIESPERTDVYVEQKLENDASASEMGLDSRMEIHTVSDAPD 460 470 480 490 500 >>gi|182888237|gb|AAI60177.1| Zinc finger and BTB domain (500 aa) initn: 3161 init1: 3161 opt: 3161 Z-score: 3572.2 bits: 670.6 E(): 2.9e-190 Smith-Waterman score: 3161; 93.200% identity (98.200% similar) in 500 aa overlap (28-527:1-500) 10 20 30 40 50 60 mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD ::.::::::::::.::::::::::::::::::: gi|182 MDSSSFIQFDVPEYSSTVLSQLNELRLQGKLCD 10 20 30 70 80 90 100 110 120 mKIAA1 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|182 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|182 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEENPESRNGVKD 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEI .:::.:::::::::: : ::: .::::::::::.:::::::::::::::::::::::::: gi|182 SSFFANPVEISPPYCSQGRQPTASSDLRMETTPSKALRSRLQEEGHSDRGSSGSVSEYEI 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 AYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSD .::::::::: :::.::::..: ::::. .:::::::::::::: :::::::::::::: gi|182 SYGSVLQHAYSYSQAASQPTNVSEAFGSLSNSSPSRSMLSCFRGGRARQKRALSVHLHSD 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 LQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRL :::.::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|182 LQGLVQGSDSEAMMNNPGYESSPRERSARGHWYPYNERLICIYCGKSFNQKGSLDRHMRL 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNHPG ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|182 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPG 400 410 420 430 440 450 490 500 510 520 mKIAA1 VTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD :.: :.:.:::::::.:::::::.:::::::.::::.:.:::::::: gi|182 VAEVRSRIESPERTDVYVEQKLENDASASEMGLDSRMEIHTVSDAPD 460 470 480 490 500 >>gi|194225839|ref|XP_001917307.1| PREDICTED: zinc finge (500 aa) initn: 3160 init1: 3160 opt: 3160 Z-score: 3571.1 bits: 670.4 E(): 3.3e-190 Smith-Waterman score: 3160; 93.400% identity (98.200% similar) in 500 aa overlap (28-527:1-500) 10 20 30 40 50 60 mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD ::.::::::::::.::::::::::::::::::: gi|194 MDSSSFIQFDVPEYSSTVLSQLNELRLQGKLCD 10 20 30 70 80 90 100 110 120 mKIAA1 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|194 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD :::::::::::::::::::::::::::::::::::::::::::::.::::.::::::::: gi|194 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEETPESRNGVKD 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEI .:::.:::::::::: ::::: .:.::::::: .:::::::::::::::::::::::::: gi|194 SSFFANPVEISPPYCSQVRQPTTSGDLRMETTSSKALRSRLQEEGHSDRGSSGSVSEYEI 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 AYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSD .::::::::: :::.::::::: ::::. .:::::::::::::: :::::::::::::: gi|194 SYGSVLQHAYSYSQAASQPSSVSEAFGSLSNSSPSRSMLSCFRGGRARQKRALSVHLHSD 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 LQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRL :::.::::::::.:::::::::::::::::.::::::::::::::::::::::::::::: gi|194 LQGLVQGSDSEALMNNPGYESSPRERSARGHWYPYNERLICIYCGKSFNQKGSLDRHMRL 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNHPG ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|194 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPG 400 410 420 430 440 450 490 500 510 520 mKIAA1 VTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD :.: :.:::::::::.:::::::.::::::::::::.:.:::::::: gi|194 VAEVRSRMESPERTDVYVEQKLENDASASEMALDSRMEIHTVSDAPD 460 470 480 490 500 >>gi|194671262|ref|XP_596267.3| PREDICTED: similar to zi (502 aa) initn: 3108 init1: 1320 opt: 3105 Z-score: 3508.9 bits: 658.9 E(): 9.6e-187 Smith-Waterman score: 3105; 91.833% identity (97.610% similar) in 502 aa overlap (28-527:1-502) 10 20 30 40 50 60 mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD ::.::::::::::.::::::::::::::::::: gi|194 MDSSSFIQFDVPEYSSTVLSQLNELRLQGKLCD 10 20 30 70 80 90 100 110 120 mKIAA1 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|194 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD :::::::::::::::::::::::::::::::::::::::::::::.::::.::::::::: gi|194 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEETPESRNGVKD 100 110 120 130 140 150 190 200 210 220 230 mKIAA1 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRS-RLQEEGHSDRGSSGSVSEYE .:::.:::::::::: ::::: .::::::::::.::::: :::::::::::::::::::: gi|194 SSFFANPVEISPPYCSQVRQPTTSSDLRMETTPSKALRSSRLQEEGHSDRGSSGSVSEYE 160 170 180 190 200 210 240 250 260 270 280 290 mKIAA1 IQIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNV ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|194 IQIEGDHEQGDLLGRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNV 220 230 240 250 260 270 300 310 320 330 340 350 mKIAA1 GAYGSVLQHAYPYSQTASQPSS-VPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLH :.::::::::: : :.::::.. : ::::. .:::::::::::::: :::::::::::: gi|194 GSYGSVLQHAYSYCQAASQPAGGVSEAFGSLSNSSPSRSMLSCFRGGRARQKRALSVHLH 280 290 300 310 320 330 360 370 380 390 400 410 mKIAA1 SDLQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHM :::::.::::::::...:::.:::::::::::.::::::::::::::::::::::::::: gi|194 SDLQGLVQGSDSEAVVSNPGFESSPRERSARGHWYPYNERLICIYCGKSFNQKGSLDRHM 340 350 360 370 380 390 420 430 440 450 460 470 mKIAA1 RLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNH ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|194 RLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNH 400 410 420 430 440 450 480 490 500 510 520 mKIAA1 PGVTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD :::.: :.:::::::::.:.:::::.::::::::::::.:.:::::::: gi|194 PGVAEVRSRMESPERTDVYAEQKLENDASASEMALDSRMEIHTVSDAPD 460 470 480 490 500 >>gi|224073995|ref|XP_002193994.1| PREDICTED: zinc finge (499 aa) initn: 2890 init1: 2890 opt: 2939 Z-score: 3321.4 bits: 624.2 E(): 2.7e-176 Smith-Waterman score: 2939; 85.200% identity (96.600% similar) in 500 aa overlap (28-527:1-499) 10 20 30 40 50 60 mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD ::.::::::::::.:.::::::::::::::::: gi|224 MDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCD 10 20 30 70 80 90 100 110 120 mKIAA1 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|224 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD :::::::::::::::::::::::::::::::::::::::::::::.::::: :.:::::: gi|224 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEENSENRNGVKD 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEI .:.:.::.::::::: :::: ..:::::::::.::::::::::::::::::::.::::: gi|224 SSYFANPIEISPPYCSQVRQSTAGSDLRMETTPGKALRSRLQEEGHSDRGSSGSISEYEI 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG ::::::: :::.::::::.::::::::::::::::::::::::::::::::::::::::: gi|224 QIEGDHEPGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 AYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSD .:::::::.: .....:: ... :.::...:.:::::::::::: :::::. . ::::: gi|224 SYGSVLQHVYSFTHASSQATGASETFGSMSNTSPSRSMLSCFRGGRARQKRVPTGHLHSD 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 LQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRL .::.:::.:::.:..:::::.:::::.:::.::::::::::::::::::::::::::::: gi|224 VQGLVQGADSESMVSNPGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRL 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNHPG ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|224 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPG 400 410 420 430 440 450 490 500 510 520 mKIAA1 VTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD ::: :.:.:::.::. .::::...:::::: :.:: .:.:..:.: : gi|224 VTEVRNRVESPDRTEAFVEQKVDNDASASE-AMDSSMEIHAMSNASD 460 470 480 490 >>gi|60098537|emb|CAH65099.1| hypothetical protein [Gall (499 aa) initn: 2871 init1: 2871 opt: 2910 Z-score: 3288.6 bits: 618.1 E(): 1.8e-174 Smith-Waterman score: 2910; 84.200% identity (96.000% similar) in 500 aa overlap (28-527:1-499) 10 20 30 40 50 60 mKIAA1 WLFSVDVAGMESTLEECNSRLRFVSGEMDNSSFIQFDVPEHSSTVLSQLNELRLQGKLCD ::.::::::::::.:.:::::::::::::::: gi|600 MDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCG 10 20 30 70 80 90 100 110 120 mKIAA1 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPSVFEQLLSFCYTGRMS ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|600 IIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMS 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTIGAEENPESRNGVKD :::::::::::::::::::::::::::::::::::::::::::::.::::: :.:::::: gi|600 LQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDSVTVGAEENSENRNGVKD 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 GSFFTNPVEISPPYCPQVRQPPVSSDLRMETTPNKALRSRLQEEGHSDRGSSGSVSEYEI .:.:.::.::::::: :::: .::::::::::.:.::::::::::::::::::.::::. gi|600 SSYFANPIEISPPYCSQVRQSTASSDLRMETTPGKTLRSRLQEEGHSDRGSSGSISEYEV 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 QIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG :::::::::::.::::::.::::::::::::::::::::::::::::::::::::::::: gi|600 QIEGDHEQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVG 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 AYGSVLQHAYPYSQTASQPSSVPEAFGGQTNSSPSRSMLSCFRGRGARQKRALSVHLHSD .:::::::.: .....:: ..: :.::. .:::::::::::::: ::::: . :::.: gi|600 SYGSVLQHVYSFTHASSQATGVSETFGNLSNSSPSRSMLSCFRGGRARQKRISAGHLHTD 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 LQGVVQGSDSEAMMNNPGYESSPRERSARGYWYPYNERLICIYCGKSFNQKGSLDRHMRL .::.:::.:...:..: :::.:::::.:::.::::::::::::::::::::::::::::: gi|600 VQGLVQGTDGDSMVSNTGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRL 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEVCGKCFPFQGTLNQHLRKNHPG ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|600 HMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPG 400 410 420 430 440 450 490 500 510 520 mKIAA1 VTEGRGRMESPERTDMYVEQKLESDASASEMALDSRLEMHTVSDAPD ::: :.:.:::.::. .::::...:::::: ..:: .:.:..:.. : gi|600 VTEVRNRVESPDRTEAFVEQKVDNDASASE-TMDSSMEIHAMSNTSD 460 470 480 490 527 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Mon Mar 16 16:35:42 2009 done: Mon Mar 16 16:42:51 2009 Total Scan time: 959.170 Total Display time: 0.160 Function used was FASTA [version 34.26.5 April 26, 2007]