Comparison of KIAA cDNA sequences between mouse and human (KIAA1993)

<<Original sequence data>>

mouse  mKIAA1993 (meh02016)     length:   6472 bp, CDS:    29 -  1612
human   KIAA1993  (bg00180)     length:   6545 bp, CDS:     2 -  1600

In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green.  When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:      1 -    28       9       19      67.9
  CDS:     29 -  1612    1358      215      13.7
3'UTR:   1613 -  6792    3794      904      19.2

amino acid

  CDS:     29 -  1612     473       51      9.7
----------------------------------------------------------


<<Alignment>>

             1 ----+----*----+----*----+----*----+----*----+----* 50
                T  N  *  A  Q  L  S  F  *  W  L  F  S  V  D  V  A
meh02016     1 CACCAACTGAGCACAGTTAAGCTTCTAATGGTTATTTTCTGTTGATGTTG 50
               |    ||||  |        ||  |    |        | |  |  |   
bg00180      1 CGGGGACTGGCCTGGCGCCGGCGGCGGCGGAGGGGGCGCCGCGGGCGGGC 50
                G  D  W  P  G  A  G  G  G  G  G  G  A  A  G  G  R

            51 ----+----*----+----*----+----*----+----*----+----* 100
                 G  M  E  S  T  L  E              R  L  R  F  V  
meh02016    51 CTGGCATGGAAAGCACCCTGGAAGAATGCAATTCAAGATTACGTTTCGTG 100
                  |   |    || | |||||             ||| |||| ||| ||
bg00180     51 GATGTGAGCGCGGCGCTCTGGA............CAGAGTACGCTTCATG 88
                 C  E  R  G  A  L  D              R  V  R  F  M  

           101 ----+----*----+----*----+----*----+----*----+----* 150
               S  G  E  M  D  N  S  S  F  I  Q  F  D  V  P  E  H 
meh02016   101 TCGGGAGAAATGGACAACAGCAGTTTCATTCAGTTTGATGTGCCTGAGCA 150
               || | ||||||||||| ||||||||| ||||||||||||||||| ||| |
bg00180     89 TCAGTAGAAATGGACAGCAGCAGTTTTATTCAGTTTGATGTGCCCGAGTA 138
               S  V  E  M  D  S  S  S  F  I  Q  F  D  V  P  E  Y 

           151 ----+----*----+----*----+----*----+----*----+----* 200
                S  S  T  V  L  S  Q  L  N  E  L  R  L  Q  G  K  L
meh02016   151 CAGCAGCACGGTTCTGAGCCAACTAAATGAGCTCCGCCTGCAAGGGAAGC 200
               ||||||||| ||||||||||| ||||| || ||||||||||| ||||| |
bg00180    139 CAGCAGCACCGTTCTGAGCCAGCTAAACGAACTCCGCCTGCAGGGGAAAC 188
                S  S  T  V  L  S  Q  L  N  E  L  R  L  Q  G  K  L

           201 ----+----*----+----*----+----*----+----*----+----* 250
                 C  D  I  I  V  H  I  Q  G  Q  P  F  R  A  H  K  
meh02016   201 TATGTGACATCATCGTCCACATTCAGGGTCAGCCCTTCCGAGCCCACAAA 250
               ||||||||||||| || ||||||||||||||||| |||||||||||||||
bg00180    189 TATGTGACATCATTGTACACATTCAGGGTCAGCCATTCCGAGCCCACAAA 238
                 C  D  I  I  V  H  I  Q  G  Q  P  F  R  A  H  K  

           251 ----+----*----+----*----+----*----+----*----+----* 300
               A  V  L  A  A  S  S  P  Y  F  R  D  H  S  A  L  S 
meh02016   251 GCCGTCCTCGCAGCCAGCTCCCCGTATTTCCGGGACCATTCAGCACTGAG 300
               || ||||| || ||||||||||| ||||||||||||||||||||  | ||
bg00180    239 GCAGTCCTTGCTGCCAGCTCCCCATATTTCCGGGACCATTCAGCGTTAAG 288
               A  V  L  A  A  S  S  P  Y  F  R  D  H  S  A  L  S 

           301 ----+----*----+----*----+----*----+----*----+----* 350
                T  M  S  G  L  S  I  S  V  I  K  N  P  S  V  F  E
meh02016   301 CACTATGAGTGGCTTGTCGATCTCTGTGATTAAGAACCCCAGCGTGTTTG 350
                || |||||||||||||| || || |||||||| || ||||  |||||||
bg00180    289 TACCATGAGTGGCTTGTCAATATCAGTGATTAAAAATCCCAATGTGTTTG 338
                T  M  S  G  L  S  I  S  V  I  K  N  P  N  V  F  E

           351 ----+----*----+----*----+----*----+----*----+----* 400
                 Q  L  L  S  F  C  Y  T  G  R  M  S  L  Q  L  K  
meh02016   351 AGCAGTTGCTCTCCTTCTGTTACACTGGAAGGATGTCCTTGCAGCTGAAG 400
               |||||||||| || || |||||||||||||| ||||||||||||||||||
bg00180    339 AGCAGTTGCTTTCTTTTTGTTACACTGGAAGAATGTCCTTGCAGCTGAAG 388
                 Q  L  L  S  F  C  Y  T  G  R  M  S  L  Q  L  K  

           401 ----+----*----+----*----+----*----+----*----+----* 450
               D  V  V  S  F  L  T  A  A  S  F  L  Q  M  Q  C  V 
meh02016   401 GATGTTGTCAGTTTTCTGACCGCAGCCAGCTTTCTTCAGATGCAGTGTGT 450
               |||||||||||||||||||| |||||||||||||||||||||||||||||
bg00180    389 GATGTTGTCAGTTTTCTGACTGCAGCCAGCTTTCTTCAGATGCAGTGTGT 438
               D  V  V  S  F  L  T  A  A  S  F  L  Q  M  Q  C  V 

           451 ----+----*----+----*----+----*----+----*----+----* 500
                I  D  K  C  T  Q  I  L  E  S  I  H  S  K  I  S  V
meh02016   451 CATTGACAAGTGCACACAGATCCTAGAGAGCATCCACTCGAAGATCAGCG 500
               ||||||||||||||| |||||||||||||||||||| || || |||||||
bg00180    439 CATTGACAAGTGCACGCAGATCCTAGAGAGCATCCATTCCAAAATCAGCG 488
                I  D  K  C  T  Q  I  L  E  S  I  H  S  K  I  S  V

           501 ----+----*----+----*----+----*----+----*----+----* 550
                 G  D  V  D  S  V  T  I  G  A  E  E  N  P  E  S  
meh02016   501 TGGGAGACGTTGACTCTGTTACCATTGGTGCTGAAGAGAATCCTGAGAGC 550
               | ||||| ||||||||||||||| | ||||||||||||||||| ||||| 
bg00180    489 TTGGAGATGTTGACTCTGTTACCGTCGGTGCTGAAGAGAATCCCGAGAGT 538
                 G  D  V  D  S  V  T  V  G  A  E  E  N  P  E  S  

           551 ----+----*----+----*----+----*----+----*----+----* 600
               R  N  G  V  K  D  G  S  F  F  T  N  P  V  E  I  S 
meh02016   551 CGAAATGGGGTGAAAGATGGCAGCTTCTTCACCAATCCTGTTGAAATCTC 600
               ||||| || ||||||||  ||||||||||  |||| || || || |||||
bg00180    539 CGAAACGGAGTGAAAGACAGCAGCTTCTTTGCCAACCCAGTGGAGATCTC 588
               R  N  G  V  K  D  S  S  F  F  A  N  P  V  E  I  S 

           601 ----+----*----+----*----+----*----+----*----+----* 650
                P  P  Y  C  P  Q  V  R  Q  P  P  V  S  S  D  L  R
meh02016   601 CCCTCCGTACTGCCCTCAGGTACGGCAGCCTCCAGTCAGCAGTGATCTTC 650
                ||||| || ||| |||||| |||||||||  | |  |||||||| || |
bg00180    589 TCCTCCATATTGCTCTCAGGGACGGCAGCCCACCGCAAGCAGTGACCTCC 638
                P  P  Y  C  S  Q  G  R  Q  P  T  A  S  S  D  L  R

           651 ----+----*----+----*----+----*----+----*----+----* 700
                 M  E  T  T  P  N  K  A  L  R  S  R  L  Q  E  E  
meh02016   651 GGATGGAGACAACCCCCAACAAAGCCCTTCGGAGCCGCTTGCAGGAAGAG 700
               |||||||||| ||||||| ||||||  | || |||||||| ||||| |||
bg00180    639 GGATGGAGACGACCCCCAGCAAAGCTTTGCGCAGCCGCTTACAGGAGGAG 688
                 M  E  T  T  P  S  K  A  L  R  S  R  L  Q  E  E  

           701 ----+----*----+----*----+----*----+----*----+----* 750
               G  H  S  D  R  G  S  S  G  S  V  S  E  Y  E  I  Q 
meh02016   701 GGGCACTCAGATCGGGGGAGCAGTGGGAGCGTGTCTGAGTATGAGATTCA 750
               ||||||||||| || ||||||||||||||||| ||||| |||||||||||
bg00180    689 GGGCACTCAGACCGCGGGAGCAGTGGGAGCGTTTCTGAATATGAGATTCA 738
               G  H  S  D  R  G  S  S  G  S  V  S  E  Y  E  I  Q 

           751 ----+----*----+----*----+----*----+----*----+----* 800
                I  E  G  D  H  E  Q  G  D  L  L  V  R  E  S  Q  I
meh02016   751 GATAGAAGGGGACCACGAGCAAGGGGACTTGTTGGTGAGAGAGAGCCAGA 800
               |||||| || ||||| |||||||| ||| | |||||||| ||||||||||
bg00180    739 GATAGAGGGAGACCATGAGCAAGGAGACCTATTGGTGAGGGAGAGCCAGA 788
                I  E  G  D  H  E  Q  G  D  L  L  V  R  E  S  Q  I

           801 ----+----*----+----*----+----*----+----*----+----* 850
                 T  E  V  K  V  K  M  E  K  S  D  R  P  S  C  S  
meh02016   801 TCACTGAGGTGAAAGTGAAGATGGAGAAGTCTGACCGGCCCAGCTGCTCC 850
               |||| |||||||||||||||||||||||||| |||||||||||||| |||
bg00180    789 TCACCGAGGTGAAAGTGAAGATGGAGAAGTCCGACCGGCCCAGCTGTTCC 838
                 T  E  V  K  V  K  M  E  K  S  D  R  P  S  C  S  

           851 ----+----*----+----*----+----*----+----*----+----* 900
               D  S  S  S  L  G  D  D  G  Y  H  T  E  M  V  D  G 
meh02016   851 GACAGCTCTTCCCTGGGTGATGACGGCTACCACACGGAGATGGTTGATGG 900
               |||||||| ||||||||||| || || |||||||| ||||||||||||||
bg00180    839 GACAGCTCCTCCCTGGGTGACGATGGGTACCACACCGAGATGGTTGATGG 888
               D  S  S  S  L  G  D  D  G  Y  H  T  E  M  V  D  G 

           901 ----+----*----+----*----+----*----+----*----+----* 950
                E  Q  V  V  A  V  N  V  G  A  Y  G  S  V  L  Q  H
meh02016   901 GGAACAAGTTGTGGCCGTGAATGTGGGCGCCTATGGCTCTGTGCTCCAGC 950
               ||||||||||||||| |||||||||||| ||||||| |||||||||||||
bg00180    889 GGAACAAGTTGTGGCAGTGAATGTGGGCTCCTATGGTTCTGTGCTCCAGC 938
                E  Q  V  V  A  V  N  V  G  S  Y  G  S  V  L  Q  H

           951 ----+----*----+----*----+----*----+----*----+----* 1000
                 A  Y  P  Y  S  Q  T  A  S  Q  P  S  S  V  P  E  
meh02016   951 ATGCATACCCCTACTCCCAGACGGCTTCACAGCCTTCCAGTGTGCCAGAA 1000
               | |||||| |||| |||||  | || ||||||||  ||| |||  |||||
bg00180    939 ACGCATACTCCTATTCCCAAGCAGCCTCACAGCCAACCAATGTATCAGAA 988
                 A  Y  S  Y  S  Q  A  A  S  Q  P  T  N  V  S  E  

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
               A  F  G  G  Q  T  N  S  S  P  S  R  S  M  L  S  C 
meh02016  1001 GCTTTTGGAGGTCAGACCAATTCCAGTCCATCCAGGTCCATGCTGAGCTG 1050
               ||||||||| ||  ||  |||||||| |||||||||||||||||||||||
bg00180    989 GCTTTTGGAAGTTTGAGTAATTCCAGCCCATCCAGGTCCATGCTGAGCTG 1038
               A  F  G  S  L  S  N  S  S  P  S  R  S  M  L  S  C 

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
                F  R  G  R  G  A  R  Q  K  R  A  L  S  V  H  L  H
meh02016  1051 CTTCCGAGGCCGTGGGGCCCGCCAGAAGCGAGCTCTGTCTGTTCACCTGC 1100
                ||||||||  |  | |||||||||||||| ||| ||||||| |||||||
bg00180   1039 TTTCCGAGGAGGGCGTGCCCGCCAGAAGCGGGCTTTGTCTGTCCACCTGC 1088
                F  R  G  G  R  A  R  Q  K  R  A  L  S  V  H  L  H

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
                 S  D  L  Q  G  V  V  Q  G  S  D  S  E  A  M  M  
meh02016  1101 ACAGTGACCTGCAGGGTGTGGTGCAGGGGTCTGACAGTGAAGCCATGATG 1150
               ||||||||||||||||  |||||||||| |||||||||||||||||||||
bg00180   1089 ACAGTGACCTGCAGGGCCTGGTGCAGGGCTCTGACAGTGAAGCCATGATG 1138
                 S  D  L  Q  G  L  V  Q  G  S  D  S  E  A  M  M  

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
               N  N  P  G  Y  E  S  S  P  R  E  R  S  A  R  G  Y 
meh02016  1151 AACAATCCCGGTTATGAGAGCAGTCCCCGGGAGAGGAGCGCCAGGGGGTA 1200
               ||||| ||||| |||||||||||||||||||||||||| || || ||| |
bg00180   1139 AACAACCCCGGGTATGAGAGCAGTCCCCGGGAGAGGAGTGCGAGAGGGCA 1188
               N  N  P  G  Y  E  S  S  P  R  E  R  S  A  R  G  H 

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
                W  Y  P  Y  N  E  R  L  I  C  I  Y  C  G  K  S  F
meh02016  1201 TTGGTACCCATACAACGAGAGGTTGATCTGTATTTACTGTGGGAAGTCCT 1250
               ||||||||| ||||| |||||||||||||||||||||||||| |||||||
bg00180   1189 TTGGTACCCGTACAATGAGAGGTTGATCTGTATTTACTGTGGAAAGTCCT 1238
                W  Y  P  Y  N  E  R  L  I  C  I  Y  C  G  K  S  F

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
                 N  Q  K  G  S  L  D  R  H  M  R  L  H  M  G  I  
meh02016  1251 TTAACCAGAAGGGAAGCCTCGACAGGCACATGCGGCTGCATATGGGGATC 1300
               | |||||||| |||||||| || ||||||||||| || |||||||| |||
bg00180   1239 TCAACCAGAAAGGAAGCCTTGATAGGCACATGCGACTCCATATGGGAATC 1288
                 N  Q  K  G  S  L  D  R  H  M  R  L  H  M  G  I  

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
               T  P  F  V  C  K  F  C  G  K  K  Y  T  R  K  D  Q 
meh02016  1301 ACCCCCTTTGTGTGCAAGTTCTGTGGGAAGAAGTACACGCGCAAGGACCA 1350
               |||||||||||||||||||||||||||||||||||||| || ||||||||
bg00180   1289 ACCCCCTTTGTGTGCAAGTTCTGTGGGAAGAAGTACACACGGAAGGACCA 1338
               T  P  F  V  C  K  F  C  G  K  K  Y  T  R  K  D  Q 

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
                L  E  Y  H  I  R  G  H  T  D  D  K  P  F  R  C  E
meh02016  1351 GCTGGAGTATCACATCCGGGGCCACACTGATGACAAACCATTCCGATGCG 1400
                |||||||| |||||||||||||| || ||||| ||||||||||| || |
bg00180   1339 ACTGGAGTACCACATCCGGGGCCATACAGATGATAAACCATTCCGCTGTG 1388
                L  E  Y  H  I  R  G  H  T  D  D  K  P  F  R  C  E

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
                 V  C  G  K  C  F  P  F  Q  G  T  L  N  Q  H  L  
meh02016  1401 AGGTCTGTGGGAAGTGCTTTCCATTCCAGGGTACCCTCAACCAGCACCTG 1450
               || |||| |||||||||||||||||||| |||||||||||||||||| ||
bg00180   1389 AGATCTGCGGGAAGTGCTTTCCATTCCAAGGTACCCTCAACCAGCACTTG 1438
                 I  C  G  K  C  F  P  F  Q  G  T  L  N  Q  H  L  

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
               R  K  N  H  P  G  V  T  E  G  R  G  R  M  E  S  P 
meh02016  1451 CGGAAAAACCACCCGGGGGTCACCGAAGGCAGGGGTCGCATGGAGTCCCC 1500
               |||||||||||||| || ||  | |||| |||| ||||||| ||||||||
bg00180   1439 CGGAAAAACCACCCAGGCGTTGCTGAAGTCAGGAGTCGCATTGAGTCCCC 1488
               R  K  N  H  P  G  V  A  E  V  R  S  R  I  E  S  P 

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
                E  R  T  D  M  Y  V  E  Q  K  L  E  S  D  A  S  A
meh02016  1501 CGAAAGAACAGACATGTATGTGGAACAGAAACTCGAAAGTGATGCATCAG 1550
               ||| ||||||||  |||| |||||||||||||| |||| ||| ||||| |
bg00180   1489 CGAGAGAACAGATGTGTACGTGGAACAGAAACTAGAAAATGACGCATCGG 1538
                E  R  T  D  V  Y  V  E  Q  K  L  E  N  D  A  S  A

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
                 S  E  M  A  L  D  S  R  L  E  M  H  T  V  S  D  
meh02016  1551 CCTCAGAGATGGCACTAGATTCCCGCCTGGAAATGCACACAGTGTCTGAT 1600
               ||||||||||||  |||||||||||  ||||||| |||||||||||||||
bg00180   1539 CCTCAGAGATGGGCCTAGATTCCCGGATGGAAATTCACACAGTGTCTGAT 1588
                 S  E  M  G  L  D  S  R  M  E  I  H  T  V  S  D  

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
               A  P  D  *                                        
meh02016  1601 GCGCCTGACTAAG...........GAGCACCTGCACAGAGCACAGCAATC 1639
               || || || ||||           | |||||   ||| ||||||  ||||
bg00180   1589 GCTCCCGATTAAGATGGTAAAGAAGTGCACCCAAACAAAGCACATTAATC 1638
               A  P  D  *                                        

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
meh02016  1640 AGCGCGTCCTTGTGATCTGCTTGGTTGTAATCTTTGCTTTTCCCCACCAC 1689
               |  || |  ||||||| ||||| ||||||||||||| ||||||| |||| 
bg00180   1639 AATGCATATTTGTGATTTGCTTTGTTGTAATCTTTGGTTTTCCCAACCAT 1688

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
meh02016  1690 CTGGACATCTCTCGGTTTTTTTGCTAGTTTCTCTGAAGGTTCTGGGTGG. 1738
               ||||| |||||| ||| | || || ||||| ||| ||| |||||| ||| 
bg00180   1689 CTGGAAATCTCTTGGTCTCTTGGC.AGTTTTTCTAAAGTTTCTGGATGGA 1737

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
meh02016  1739 GGACTTC.TTGTGTTTACCCTCCCCTCT.CCTCCCCTCCCCCAAGGAGCT 1786
                 ||||| ||||||||| |||  || || ||  |||||||| ||||||||
bg00180   1738 ACACTTCGTTGTGTTTATCCTTTCCCCTGCCCTCCCTCCCCGAAGGAGCT 1787

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
meh02016  1787 CAAAGCATGAAGGGCAGCATATCCAGGGAAAACGCAGGCTGACAGTATTC 1836
               |||||||||||||||| |  ||||||||||||| ||||||||||||||||
bg00180   1788 CAAAGCATGAAGGGCAACGCATCCAGGGAAAACACAGGCTGACAGTATTC 1837

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
meh02016  1837 CTTTTTGGCTAAAATACTTTTTGGCTTCTCCCAGCTCTGCCAGTGATTCA 1886
               || ||||||| || |          |  ||| |  ||||||||||||| |
bg00180   1838 CTCTTTGGCTGAACT........CTTAATCCAAAATCTGCCAGTGATTTA 1879

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
meh02016  1887 GCTATGCCAACTGGTTGACCTCACGTTCTCTGCTAAGAGACA.....GCA 1931
               ||||||||||||||||||||   | |||||||| ||||| ||        
bg00180   1880 GCTATGCCAACTGGTTGACCCTCCATTCTCTGCCAAGAGGCATACTCTTT 1929

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
meh02016  1932 CTCCCTGTGGGTGCTAGCCCCAGTGCATTTTCATGGTGAGAGGCTAGGAT 1981
               |||  |||| | ||| ||  ||||||| || || || | |||  ||||||
bg00180   1930 CTCATTGTGTGCGCTGGCAGCAGTGCACTTCCACGGAGGGAGATTAGGAT 1979

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
meh02016  1982 GCTGTCAGCTGGTGCAAATGGGTAATCTTTTCTAATTTAAAATTACTTTT 2031
               || |||||||| | ||||||||||| |||||||||||||||||| |||||
bg00180   1980 GCCGTCAGCTGATACAAATGGGTAACCTTTTCTAATTTAAAATTCCTTTT 2029

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
meh02016  2032 AGGGGGTAGTTAGACAATTTATATATATATATAATAAAGTGGTTATTATA 2081
               ||||||||||||||||||||||||||||||||||||||    ||||||||
bg00180   2030 AGGGGGTAGTTAGACAATTTATATATATATATAATAAAACTATTATTATA 2079

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
meh02016  2082 TATATAGTATATATACATTCTCAAATTTGAGTTTATTCTGGTTGAGGTGA 2131
               ||||||||||||||||||| |||||||||| |||||||||||||||||||
bg00180   2080 TATATAGTATATATACATTTTCAAATTTGATTTTATTCTGGTTGAGGTGA 2129

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
meh02016  2132 ATGTAAGAGGAATATATAATTTAATACAATGTGAACAGAGC.TCTGGCTT 2180
               |||||||||||||||||||||||||||||||||||||| || ||||  | 
bg00180   2130 ATGTAAGAGGAATATATAATTTAATACAATGTGAACAGGGCTTCTGAGTC 2179

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
meh02016  2181 TGTTTCAGCCCCGCCTACTATGTTA..GTTTTAACCCTTCGTTTCCCTTA 2228
               | | ||| |||  |||| |||||||  |||||  |||||| |||||||||
bg00180   2180 TATCTCATCCCTACCTAATATGTTAGGGTTTTGCCCCTTCATTTCCCTTA 2229

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
meh02016  2229 CAGAAGAATGTCAGTAGACTTTCATATATAGTAATCATTGTGTCCAAATG 2278
               || |||||||| |||||       | |||| ||||||||||||||||| |
bg00180   2230 CAAAAGAATGTTAGTAG......GTTTATATTAATCATTGTGTCCAAAAG 2273

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
meh02016  2279 CAAGCAAAGCAAATCACAGTGTTCATAGCTCTGCTTCATAACAAACACAT 2328
               ||||||||||||||||||||||||| ||||||||||||||||||| ||||
bg00180   2274 CAAGCAAAGCAAATCACAGTGTTCACAGCTCTGCTTCATAACAAATACAT 2323

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
meh02016  2329 AAACCAAATGCCATAAGGTTCCTTCAACTGTAGTGGGAAACCATTTTGGA 2378
               ||||||||||||||||  || |||||||| |||| |||||||  ||||||
bg00180   2324 AAACCAAATGCCATAAAATTTCTTCAACTCTAGTTGGAAACC.GTTTGGA 2372

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
meh02016  2379 GTTTTTGTTTGTTGTC...CAGGTACACTGGGCAGCTTGCGGTGCTGACC 2425
                |||||||| ||||||   ||||||  ||||    | || ||||||||||
bg00180   2373 ATTTTTGTTAGTTGTCCAGCAGGTAAGCTGGATGACCTGTGGTGCTGACC 2422

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
meh02016  2426 TTCCTACACAGTGTATTGTTACACTAGCCAACCCCAAAGGAGCAGTGCTT 2475
               ||  |||| |||||| ||||| | ||||||||||||||||||||||| ||
bg00180   2423 TTTTTACATAGTGTAGTGTTATATTAGCCAACCCCAAAGGAGCAGTGGTT 2472

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
meh02016  2476 TTCAAGGTTTTTACTGGCTTATAACTCTACCTTCATTCTGTACTGTAGAA 2525
               |||||||||||||||||| || || ||||||||||||| |||||||||||
bg00180   2473 TTCAAGGTTTTTACTGGCCTACAAATCTACCTTCATTCCGTACTGTAGAA 2522

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
meh02016  2526 TCATACATACCAGGTAACTAAATCG.......CTCCACCTTGAGTTAGT. 2567
                ||||||||||||||||||||||||       ||| | | ||||||||| 
bg00180   2523 ACATACATACCAGGTAACTAAATCGAATCACTCTCTATCATGAGTTAGTA 2572

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
meh02016  2568 ...ACTCCGACTAAAGGACAGGAATTTGTAGAGCTTGTCTACAAAATTCT 2614
                  ||||  ||| ||||| ||| ||||||||  | |||||||||||||||
bg00180   2573 CTCACTCGCACTTAAGGAAAGGGATTTGTAGTTC.TGTCTACAAAATTCT 2621

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
meh02016  2615 CCAAGCAGTGTTGTGGTTTTGTTATTTTGTTTTCTTTTTTTTTTTC.TCT 2663
               |||||||||||||||||||| ||  ||| | || ||||| ||| || | |
bg00180   2622 CCAAGCAGTGTTGTGGTTTTTTTTGTTTTTGTTTTTTTTCTTTCTCTTTT 2671

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
meh02016  2664 CAAACAGCCAGTTCAGGTGCACAGCAACTTTTT.TCTATGCAGTTCCCAG 2712
               ||||||||||||||||||||||||||||||||| |  |||||||||||||
bg00180   2672 CAAACAGCCAGTTCAGGTGCACAGCAACTTTTTCTACATGCAGTTCCCAG 2721

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
meh02016  2713 GGAAACTGCAGAACTTGGAATTTGTACTTTTTGTAAAGCTATATACTCTA 2762
               |||||||||||||||| ||||||||||||||||||||||  |||||||||
bg00180   2722 GGAAACTGCAGAACTTAGAATTTGTACTTTTTGTAAAGC..TATACTCTA 2769

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
meh02016  2763 CGGGAATTGCAAGCAATATATCTATCTTGGTATTGTGTGTGCTAATGAGA 2812
                ||||||||||||||||||||||||||| |||||||||||||||||||||
bg00180   2770 TGGGAATTGCAAGCAATATATCTATCTTAGTATTGTGTGTGCTAATGAGA 2819

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
meh02016  2813 GCCCCAGAGGCTCCC...CACTCTCAGTGTTTCCTGCTTAAAGAA..AAA 2857
               ||| ||| |||||||   | |||||||||||||||||||||||||  || 
bg00180   2820 GCCTCAGTGGCTCCCCCACTCTCTCAGTGTTTCCTGCTTAAAGAACCAAC 2869

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
meh02016  2858 AGTCAGAACTCTCTCTAAGATCCTCTGTGTGTCACCAGATCTGTGTGTGT 2907
               |||   ||  | ||||||||| ||||||||||||||| |||    |||||
bg00180   2870 AGTTTAAAAGCCCTCTAAGATACTCTGTGTGTCACCAAATC....TGTGT 2915

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
meh02016  2908 GTCTCACATTTTTGGTCATGTGGTGCTATTTTTATGTTAACTATC.TTTT 2956
               ||| |   ||||||||||||||||||||||||  |||||| | || ||||
bg00180   2916 GTCACCATTTTTTGGTCATGTGGTGCTATTTT..TGTTAAGTGTCTTTTT 2963

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
meh02016  2957 AGGTCAGTATCGGTCTAGAAAATGTGAAACCTACCAGTAGTACTGA..TT 3004
               |||||||||| | | |||||||||||||| ||    ||| || |||  | 
bg00180   2964 AGGTCAGTATAGTTGTAGAAAATGTGAAATCTGATGGTAATAATGAATTA 3013

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
meh02016  3005 TAGTTACTTTCCTCTC..AAGTTCACAGCTTGGAAAGAAACCTCAAAGGC 3052
               || ||  |||||||||   |||||| |||||| ||||| |||||||| ||
bg00180   3014 TAATTGTTTTCCTCTCTTGAGTTCATAGCTTGAAAAGAGACCTCAAAAGC 3063

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
meh02016  3053 ATGTGCTGGCAAACTGGTTACTG......................TCTGA 3080
               ||||||||||||||  |||||||                      | |||
bg00180   3064 ATGTGCTGGCAAACACGTTACTGTATGAAAACATACCTGAGTCCATTTGA 3113

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
meh02016  3081 GTTGTGTCTGGTCAGTGCTTTGGAGACTGTC.TCTGCTTGCTGTTAGATT 3129
                |  ||| |  | ||| |||| |  | |||| || | |   | ||   ||
bg00180   3114 ATAATGTTTTATTAGTACTTTCGGAAATGTCTTCAGTTCTGTATTGTGTT 3163

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
meh02016  3130 CATATACACCAACAGGCTTCACAA.ATGGCTCTGGTGCTGTGGACTCAGG 3178
               || |||||| ||||||||| |||| || |||  ||| ||||  |||| ||
bg00180   3164 CACATACACAAACAGGCTTTACAAGATTGCTTCGGTACTGTAAACTCTGG 3213

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
meh02016  3179 CAGAGAG..........GGCAGTTTAG........TCATGCAGCTGGCTG 3210
               |||||||          |||||||| |        |  ||| || |||||
bg00180   3214 CAGAGAGTAATTTTGTAGGCAGTTTGGTGGTGAGTTTGTGCTGCAGGCTG 3263

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
meh02016  3211 CC..GGGGACAGCGGCGCTCTAGTCTCTGCCTGAGAACCTGAGC.CTGAG 3257
               ||   ||||   | ||| ||| || |||||||||||||||| || |||||
bg00180   3264 CCTGTGGGATGTCAGCGTTCTGGTATCTGCCTGAGAACCTGGGCTCTGAG 3313

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
meh02016  3258 .............................ACATGGACTCAAACCAACAGA 3278
                                            |||  |   | | | || |||
bg00180   3314 ACGCACAACCAGTGCACCTCCATAGGAGAACAGTGCAGCCACCTAAAAGA 3363

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
meh02016  3279 CCCAGAATCTGAGGACCAACCTCAAAGGCTAGGAGCT.AAGGAATACAGA 3327
                  |  | |  ||||||| ||||| ||||||| || | ||||||||||||
bg00180   3364 AAAACGAACGAAGGACCAGCCTCAGAGGCTAGAAGTTAAAGGAATACAGA 3413

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
meh02016  3328 AATAGATGTTTGCTGGTCTGTCATGCTTTTGTGGCTCTTAAGATACCAAG 3377
               | ||||||||||||||| |    ||||||| |||||| ||| ||||||| 
bg00180   3414 ATTAGATGTTTGCTGGTTTTCTGTGCTTTTTTGGCTCCTAAAATACCAA. 3462

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
meh02016  3378 AACAATGGGTTTGGGGGGAAAACTTTTTCGTTTTTTGTTTGTTTGTTTGT 3427
                                             |  |   ||||||| | | |
bg00180   3463 ..............................TGGTGGATTTGTTTTTGTTT 3482

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
meh02016  3428 TTGTTTGTTTGTTTTTGAGAAAAAGTTTGATCCCAGCCC.TTGTGTGTAG 3476
               |||||| ||  |||  || | |||   | || | ||||| ||||||||| 
bg00180   3483 TTGTTTTTTGTTTTGAGAAATAAAAAGTCATTCAAGCCCTTTGTGTGTAA 3532

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
meh02016  3477 CAGCCCC....GGTGGCGGCT...CAGTAGCACCTCCTTAGCACACAGGA 3519
                ||||||    |||||| |||   |||| ||| ||| || ||||||||||
bg00180   3533 TAGCCCCCAGGGGTGGCAGCTGTGCAGTCGCATCTCTTTGGCACACAGGA 3582

          3651 ----+----*----+----*----+----*----+----*----+----* 3700
meh02016  3520 TCTGCTCACATGTGAACT....CGCCTCACCTCAGTGTTAACT.CCTGTA 3564
               |||| |||| ||||||||    |||  ||| |||||||||||| |||  |
bg00180   3583 TCTGTTCACGTGTGAACTGCTGCGCTACACATCAGTGTTAACTCCCTACA 3632

          3701 ----+----*----+----*----+----*----+----*----+----* 3750
meh02016  3565 GATGA....CTAATCCCGCTGCTCC..TGGAGCAGCTTTTGCTAATCGGG 3608
               ||| |    ||||||||||||||||   ||||| |||||    |||||||
bg00180   3633 GATTACACTCTAATCCCGCTGCTCCCGAGGAGCGGCTTTGCTAAATCGGG 3682

          3751 ----+----*----+----*----+----*----+----*----+----* 3800
meh02016  3609 TATACGGTAT...GCCTTTTCCTCGTCAAACTGCCTAAGTCGGGATCTCT 3655
               ||||  ||||    | |||||||||||||||||||||||| ||| |   |
bg00180   3683 TATATAGTATATGCCTTTTTCCTCGTCAAACTGCCTAAGTAGGGGTTCGT 3732

          3801 ----+----*----+----*----+----*----+----*----+----* 3850
meh02016  3656 TCTTTCCCTGGAGCATTTGTTCA...GCCGAGAAAGCTGAGCGCCTCAAG 3702
               ||| |||||| |||| |||||||    | |  ||||| | | ||||||||
bg00180   3733 TCTCTCCCTGAAGCACTTGTTCAACTCCTGTTAAAGCCGCGTGCCTCAAG 3782

          3851 ----+----*----+----*----+----*----+----*----+----* 3900
meh02016  3703 GGGAGGCTGGGCCCCAAGTGTTTACCTACTTAAGTGTGTTCTGAGGCTTC 3752
               |||||||||| ||||||||||||||| |||||| | ||||||| || |||
bg00180   3783 GGGAGGCTGGACCCCAAGTGTTTACCCACTTAAATATGTTCTGGGGTTTC 3832

          3901 ----+----*----+----*----+----*----+----*----+----* 3950
meh02016  3753 AGGTAAATGTCTGTGATTTTCATTTTCCTTACATGATTGCGTTTGCTTTT 3802
               |||||||||| ||||  |||  |||||||||||||| |  ||||| ||||
bg00180   3833 AGGTAAATGTTTGTGGGTTTTTTTTTCCTTACATGAATAAGTTTGGTTTT 3882

          3951 ----+----*----+----*----+----*----+----*----+----* 4000
meh02016  3803 GATTTTTTTTTAATTAAATGCAAAAACTTTTTTTTTTCGTATTGTGATAT 3852
               ||||||||||||||| |||||||||| |||        || |||||||| 
bg00180   3883 GATTTTTTTTTAATTGAATGCAAAAAATTT........GTGTTGTGATAC 3924

          4001 ----+----*----+----*----+----*----+----*----+----* 4050
meh02016  3853 CAATTAAGTTTGTGACAAGAAAGGCCCTAAATCTAAGGATGTGAGACATC 3902
                ||||||||||||||||||||| |||| ||||| |||||  | |||  ||
bg00180   3925 AAATTAAGTTTGTGACAAGAAATGCCC.AAATCCAAGGACATAAGAGGTC 3973

          4051 ----+----*----+----*----+----*----+----*----+----* 4100
meh02016  3903 GAGCTCAGGGAAGGAGCCTCCTTTTCACTGAGGCCTGGGGCCTTCTGAGG 3952
                |||||||||||||| ||||||||||||| |||| |||||||| | | | 
bg00180   3974 AAGCTCAGGGAAGGAACCTCCTTTTCACTCAGGCTTGGGGCCTCCAGCGA 4023

          4101 ----+----*----+----*----+----*----+----*----+----* 4150
meh02016  3953 AGCTTCCAGAGCTTTCTGTGGT...................GAGGCTGGC 3983
                | ||||||||| |||  ||||                   ||||    |
bg00180   4024 GGTTTCCAGAGCATTCCATGGTATGAGAGACAGTGAGGAGGGAGGGCACC 4073

          4151 ----+----*----+----*----+----*----+----*----+----* 4200
meh02016  3984 ACACTCGGGCAGCGTGTCCATGTCCTGGCTCTTGTCACTGTCTGT.TGGA 4032
                  | ||||||   |  |   ||||||||||||| || |||| || |  |
bg00180   4074 TGGCGCGGGCA..CTTCCAGCGTCCTGGCTCTTGGCATTGTCCGTCTTAA 4121

          4201 ----+----*----+----*----+----*----+----*----+----* 4250
meh02016  4033 ACTCACAGACATGGAGTTC.TTGTGTTTGTCAACTTGTTTAGCTGGTTTG 4081
                || |   ||||||||||| |||| ||||| ||  |||||| ||||||||
bg00180   4122 CCTTATTTACATGGAGTTCTTTGTATTTGTGAATCTGTTTAACTGGTTTG 4171

          4251 ----+----*----+----*----+----*----+----*----+----* 4300
meh02016  4082 AGTTTACCAAAGAGTGACTTATCCAAAATTGTCTTTGACAAAAATATACA 4131
               ||||||||||||||||||||||||||||||||||||||||||||||| ||
bg00180   4172 AGTTTACCAAAGAGTGACTTATCCAAAATTGTCTTTGACAAAAATATCCA 4221

          4301 ----+----*----+----*----+----*----+----*----+----* 4350
meh02016  4132 TTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGTTAAA 4181
               ||||||||||||||||||||||||||||||||||||||||||||||||| 
bg00180   4222 TTGCTTTGATTGTACAGTTCAGGTTCAAACATTGTAATGGGACTGTTAAG 4271

          4351 ----+----*----+----*----+----*----+----*----+----* 4400
meh02016  4182 GGGCAGAAAACCGATT...TGAGTTTTAAATGATCATGATTCCGTGTTTT 4228
               ||||||||||  ||||   |   | |  ||  |||||||||||   ||||
bg00180   4272 GGGCAGAAAATTGATTGAGTTTCTCTCTAAGAATCATGATTCCACATTTT 4321

          4401 ----+----*----+----*----+----*----+----*----+----* 4450
meh02016  4229 ACAAATTGCGCTTGCTCCCATTCGTGTTGCTAACACTTTACCCTCTCCAC 4278
                ||| || | |||||||||||||||||||||||||||||||||| |||||
bg00180   4322 GCAAGTTCCACTTGCTCCCATTCGTGTTGCTAACACTTTACCCTTTCCAC 4371

          4451 ----+----*----+----*----+----*----+----*----+----* 4500
meh02016  4279 TGCTAGCAGTGTTAAGAATGAATTCTCAAGCCATAACACAGTACTGTAAA 4328
               |||| |||||||||||||||||||||||||||||||||||||||||||||
bg00180   4372 TGCTCGCAGTGTTAAGAATGAATTCTCAAGCCATAACACAGTACTGTAAA 4421

          4501 ----+----*----+----*----+----*----+----*----+----* 4550
meh02016  4329 GTT.CACAGGGCTTCGAGGGGGACAGCGCCCAGGCCAGCACAGCGCTGCA 4377
               ||| | |||||||||||||| | ||||||| |||||||||| | ||||  
bg00180   4422 GTTCCGCAGGGCTTCGAGGGAGGCAGCGCCTAGGCCAGCACGGAGCTGTG 4471

          4551 ----+----*----+----*----+----*----+----*----+----* 4600
meh02016  4378 TAGCCTGTCTGCACAGTCACCCTAGGTGCCTACCGGTGGGCATGGCTACC 4427
               |||||| ||||  |  || | ||      || ||   |||  || ||   
bg00180   4472 TAGCCTCTCTGAGCGTTCGCACTGTCATGCTTCCCAGGGGTGTGACTGGT 4521

          4601 ----+----*----+----*----+----*----+----*----+----* 4650
meh02016  4428 AAGGG...CCCACTGTGCAGATAGCGCAGCAGCGGTTAATTGTGCCTAGC 4474
                || |     | |  | ||||| | ||||||||  |||||||||||| ||
bg00180   4522 GAGAGATTAACTCCATTCAGATCGGGCAGCAGCAATTAATTGTGCCTTGC 4571

          4651 ----+----*----+----*----+----*----+----*----+----* 4700
meh02016  4475 CACATGAGGATGTTCCAGGAGAGACAGCATAGCCACCTA...GCAGGCCT 4521
               | |||||||||||  ||||||    | |||  ||||  |   | |    |
bg00180   4572 CGCATGAGGATGTGTCAGGAGGATTAACATGACCACAGAACCGAAACATT 4621

          4701 ----+----*----+----*----+----*----+----*----+----* 4750
meh02016  4522 CTCTCCCCAAAGCTCACT................................ 4539
               |||||||  ||| |||||                                
bg00180   4622 CTCTCCCTGAAGTTCACTTCACGTCTCCGCAGACGAAGTACGCTGTGTAA 4671

          4751 ----+----*----+----*----+----*----+----*----+----* 4800
meh02016  4540 .......GTGCAACTCCTTGTGGACAGCAAA...CCTGTCCCTGTACAGT 4579
                      | ||||||| || |||| ||||||   ||| |  |||||||||
bg00180   4672 CTCCTTAGAGCAACTCTTTTTGGAAAGCAAAGTCCCTATTTCTGTACAGT 4721

          4801 ----+----*----+----*----+----*----+----*----+----* 4850
meh02016  4580 TGTAGGTTAGGTCTCTCA.CTATAGCCGATGCACAAGTCCACTAAGATAA 4628
               | |||||||||| | |||  |||| | |||||| || || | ||||||||
bg00180   4722 TTTAGGTTAGGTGTTTCATTTATAACAGATGCAGAAATCAATTAAGATAA 4771

          4851 ----+----*----+----*----+----*----+----*----+----* 4900
meh02016  4629 A.CAATATGTGAAGACATCTTTTGCAGTGAAGTATGTCCTGCTTTCATAC 4677
               |   ||||||||||| ||||||| |||| || ||| |||||  |||||| 
bg00180   4772 AGTGATATGTGAAGAAATCTTTTACAGTAAAATATATCCTGAATTCATAT 4821

          4901 ----+----*----+----*----+----*----+----*----+----* 4950
meh02016  4678 AGGCCTGTGCGTGATTGAGTCTCTTC.TCAGCTACC.TTTCCATGTTAGA 4725
               |||| ||| | | ||||||||||||| | ||||||| |||| || |||||
bg00180   4822 AGGCTTGTTCATAATTGAGTCTCTTCTTGAGCTACCTTTTCAATATTAGA 4871

          4951 ----+----*----+----*----+----*----+----*----+----* 5000
meh02016  4726 CAATGTGAAGACAGCCACAGCGCCCTTCCCT...GCAACATTACCCCATT 4772
               ||||||||||||||  |||||| ||||  ||   |  |  |  ||   | 
bg00180   4872 CAATGTGAAGACAGTGACAGCGTCCTTTTCTAGAGATATTTAGCCTGTTA 4921

          5001 ----+----*----+----*----+----*----+----*----+----* 5050
meh02016  4773 GCACAAACTGTGAAGA.....TGTTTTATACTTTTGCTAACACTTGTGGT 4817
                 ||||||||||||||       |||||||||||| ||||   |||||||
bg00180   4922 TTACAAACTGTGAAGACAAAGAATTTTATACTTTTACTAATGTTTGTGGT 4971

          5051 ----+----*----+----*----+----*----+----*----+----* 5100
meh02016  4818 TTTCAATCTTTGTTT..GTTCTCATCAGTACTCTGCCCTCTTGTTTCTAC 4865
               ||| ||   || |||   |||| |||||| |||| ||||||  |||||||
bg00180   4972 TTTAAACAGTTATTTTCATTCTAATCAGTTCTCTACCCTCTAATTTCTAC 5021

          5101 ----+----*----+----*----+----*----+----*----+----* 5150
meh02016  4866 TAAAACTGTAAATACATTTAGGAA..CCATTTGTAAATACAGT.TACAAA 4912
               |||| |||||||||||||||| ||    ||||||||||||||| ||   |
bg00180   5022 TAAAGCTGTAAATACATTTAGAAATTATATTTGTAAATACAGTATATGGA 5071

          5151 ----+----*----+----*----+----*----+----*----+----* 5200
meh02016  4913 GATGAGTTCATCTTCCTGGTCAGTGG.AAAAGCCTCCCAGTCAATTGGCT 4961
               ||  |||| || ||  |||||||||| ||||||||||||  |||||||| 
bg00180   5072 GACAAGTTAAT.TTTTTGGTCAGTGGAAAAAGCCTCCCAACCAATTGGCC 5120

          5201 ----+----*----+----*----+----*----+----*----+----* 5250
meh02016  4962 CTGCCTTGGCATTTTTTTGTTGTTGGTGGGTTTCTCTCTCTCTCTCTCTC 5011
               ||||||||||| || | |                                
bg00180   5121 CTGCCTTGGCAGTTGTGT................................ 5138

          5251 ----+----*----+----*----+----*----+----*----+----* 5300
meh02016  5012 TCTCTCTCTCTCTCTCTCTCCTTCTCTCTCCCTCTCTCTCCCTCCCTCCT 5061
                                                                 
bg00180   5139 .................................................. 5139

          5301 ----+----*----+----*----+----*----+----*----+----* 5350
meh02016  5062 CTCCCTTCCCTTCCTCCCTCTCTTTTCTTTCTCCCTCTCTCCTTCCTTCC 5111
                                                                 
bg00180   5139 .................................................. 5139

          5351 ----+----*----+----*----+----*----+----*----+----* 5400
meh02016  5112 TTCCCTCCCTCCCTCTCCCCCCTCTCTCTCTCTCTCTCTTGTGTGTGTGT 5161
                                         | | | |   | ||||   ||| |
bg00180   5139 ..........................TTTTTGTTGTTGTTGTTGTTGTTT 5162

          5401 ----+----*----+----*----+----*----+----*----+----* 5450
meh02016  5162 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACTGTTGGTTCACT 5211
                 || |   | | | | | |        |   | ||||||| ||||||||
bg00180   5163 TAGTTTAGTTTTTTTTTTTTAAACAGCAGAAAGGATACTGTCGGTTCACT 5212

          5451 ----+----*----+----*----+----*----+----*----+----* 5500
meh02016  5212 GTTAAACAGAATATACTGTAGAACTAAATTGGTAATTTTTAAATCTCCCA 5261
               ||| | |||||||||||||||||| ||| || |||||||||||||| |||
bg00180   5213 GTTGAGCAGAATATACTGTAGAACGAAAATGATAATTTTTAAATCTTCCA 5262

          5501 ----+----*----+----*----+----*----+----*----+----* 5550
meh02016  5262 GAGATCTATAAATGTATGCCTCTCTTAATGATGGCAAGTATAACCCAC.C 5310
               |||    || | |  ||| || |  ||||||| |||| ||||||| || |
bg00180   5263 GAG...CATGAGTAAATGTCTTTTCTAATGATAGCAAATATAACCAACTC 5309

          5551 ----+----*----+----*----+----*----+----*----+----* 5600
meh02016  5311 TCTGTTT..................TACAGGCATGCATTTGTGTGTGTGT 5342
               | |||||                  || || | ||| | | | |||||||
bg00180   5310 TTTGTTTTTCCCTTAGCCCAGACCATATAGACCTGCGTAT.TTTGTGTGT 5358

          5601 ----+----*----+----*----+----*----+----*----+----* 5650
meh02016  5343 GTGTGTGTGTGTGTTTAATTTTTAACAACCTAGATTCTGGGGAGAATCCG 5392
               |  | ||| | | |||   || | ||| ||||||  || || | |||  |
bg00180   5359 GGTTTTGTTTTTATTTTTGTTCTTACAGCCTAGACCCTAGGAAAAATTTG 5408

          5651 ----+----*----+----*----+----*----+----*----+----* 5700
meh02016  5393 AAAGAACATGACGCAAGGGCGGGGGG.....ACGTCTGTGTGAGTGAGCT 5437
                | ||||| ||  ||||||| |||||      | ||| ||||| ||||||
bg00180   5409 CAGGAACACGAAACAAGGGCTGGGGGGAAAATCATCTATGTGAATGAGCT 5458

          5701 ----+----*----+----*----+----*----+----*----+----* 5750
meh02016  5438 CTGCCTT....GGGTTGCTGTGTTTTAT....TCTAAGCTTTCCGCTTGT 5479
                | | ||     | |   ||| ||||||    || |   ||||   | ||
bg00180   5459 TTACTTTAAAGAGATCAATGTATTTTATTTTATCAACTTTTTCTCTTAGT 5508

          5751 ----+----*----+----*----+----*----+----*----+----* 5800
meh02016  5480 TACTG....CTATGTGTTTGTAGTTCT.GTTGTTGTTAGATTCTATAATG 5524
               |||||     | |||  |||| || || ||| |||||| ||||| |||||
bg00180   5509 TACTGTGATTTTTGTTGTTGTTGTCCTCGTTATTGTTAAATTCTGTAATG 5558

          5801 ----+----*----+----*----+----*----+----*----+----* 5850
meh02016  5525 GTTTCCTGTGAAGCCGCCACTGAAAGGGACTCAAATATGCAACATCTAAA 5574
               ||||||||||||||| |||||||||||||||||||||||||||| |||||
bg00180   5559 GTTTCCTGTGAAGCCTCCACTGAAAGGGACTCAAATATGCAACACCTAAA 5608

          5851 ----+----*----+----*----+----*----+----*----+----* 5900
meh02016  5575 CTATTTTCCAAGGGCTCATGCCCCTTGAATGGTGCTTTTAGCCTGGTCAG 5624
               ||||||||||||||| ||||||||||||||||||||| ||| ||||||||
bg00180   5609 CTATTTTCCAAGGGCACATGCCCCTTGAATGGTGCTTCTAGACTGGTCAG 5658

          5901 ----+----*----+----*----+----*----+----*----+----* 5950
meh02016  5625 GGTTATTTATTAAATTTTATATATGAAAGTACTGGGGAATTATGTAAACT 5674
               ||||||||||||||||||||||||||||||| |||||||||||||||| |
bg00180   5659 GGTTATTTATTAAATTTTATATATGAAAGTATTGGGGAATTATGTAAATT 5708

          5951 ----+----*----+----*----+----*----+----*----+----* 6000
meh02016  5675 CTTTATACAAGACTATCTAGTTCTTACATCATAGGTTTC..ATTACTCAG 5722
               |||||||  | |||||||||||| || ||||||| ||||  |||||||||
bg00180   5709 CTTTATATGAAACTATCTAGTTCATAAATCATAGATTTCATATTACTCAG 5758

          6001 ----+----*----+----*----+----*----+----*----+----* 6050
meh02016  5723 CGCAGCTGAACTGAAAGTTCAGGGAAGTCATTCACTTTGTTCCAGATTTG 5772
                ||| ||||||| |||||||||  ||||||||||| |||||||| |||||
bg00180   5759 TGCAACTGAACTAAAAGTTCAGAAAAGTCATTCACATTGTTCCAAATTTG 5808

          6051 ----+----*----+----*----+----*----+----*----+----* 6100
meh02016  5773 TAATGGTCGTCACACAT.......GTCGTCTTCAGTAAGTGCCAGA..GT 5813
               ||||||| ||||||  |       ||| | ||||||||||||||||  ||
bg00180   5809 TAATGGTTGTCACATGTCACATGCGTCTTTTTCAGTAAGTGCCAGAGTGT 5858

          6101 ----+----*----+----*----+----*----+----*----+----* 6150
meh02016  5814 TCCCACTGTTCCTGCC..........................AGGGCTTG 5837
               |||||||||| |||||                          ||  | ||
bg00180   5859 TCCCACTGTTTCTGCCCAGTGCTTGACTTCTCGGCCCGGAAGAGAACCTG 5908

          6151 ----+----*----+----*----+----*----+----*----+----* 6200
meh02016  5838 CCAACTCCAGGTGCTCCCCTGGGTCTGGTACAGACAGGGCTATTG..... 5882
               |   |||  | | |   |||| |||||| |||||| |||||||||     
bg00180   5909 CTTTCTCTGGTTTCCTTCCTGAGTCTGGCACAGACGGGGCTATTGTAGTT 5958

          6201 ----+----*----+----*----+----*----+----*----+----* 6250
meh02016  5883 ......CTGCTCCTGGAGCAAGCTCTGCTCACTGCCCTGAGTGGCAGCCT 5926
                     |   ||||||||  |||  |||      | |   || ||||  |
bg00180   5959 CTTGATCAAGTCCTGGAGTCAGCCTTGCCTGGCTCTCCTTGTAGCAGATT 6008

          6251 ----+----*----+----*----+----*----+----*----+----* 6300
meh02016  5927 GAGCTTACAGACCTCTCACCGCCCTGCCCTTCAGTGACAAGCATGCTGTG 5976
                ||   ||||||||||       |||||| ||||||||||| ||||||||
bg00180   6009 CAGTCCACAGACCTCT.....TGCTGCCCCTCAGTGACAAGTATGCTGTG 6053

          6301 ----+----*----+----*----+----*----+----*----+----* 6350
meh02016  5977 AATGTGGCCTCAGGACTTGGAGACCAAGCTCCAGGCTGCTGCCCTGAGTA 6026
               |||    |||  |||||||  | ||||||    || ||||||||||| ||
bg00180   6054 AATTCAACCTTTGGACTTGCTGCCCAAGCCTTTGGTTGCTGCCCTGACTA 6103

          6351 ----+----*----+----*----+----*----+----*----+----* 6400
meh02016  6027 GAGCAAGAGGTAAACTCCCCTGCCTCCCCTGAGAACGACCGTTTTCCTAA 6076
                 | ||||||||||||  ||||  |    |||||| |||| |||||||||
bg00180   6104 TTGTAAGAGGTAAACTTACCTGGTTTGTTTGAGAATGACCATTTTCCTAA 6153

          6401 ----+----*----+----*----+----*----+----*----+----* 6450
meh02016  6077 TGTGAAATC...ACCTCTCACCAC.TTTAGCAGTAGGGCTAAC.TAGTCT 6121
               ||||||| |     |||||||||| ||||  |||||||||||| |  | |
bg00180   6154 TGTGAAAACCATCTCTCTCACCACTTTTATTAGTAGGGCTAACATTTTTT 6203

          6451 ----+----*----+----*----+----*----+----*----+----* 6500
meh02016  6122 TCTGTTACAAATGGCTGAGCAATTTGAATGACTTCACATGGTGTCATTAT 6171
               || |||| |||||| ||||||||||||||||||| |||  ||||||||||
bg00180   6204 TCCGTTATAAATGGTTGAGCAATTTGAATGACTTAACACAGTGTCATTAT 6253

          6501 ----+----*----+----*----+----*----+----*----+----* 6550
meh02016  6172 CTTGCAATATAAACTGGTAACCT..CAACGCCACACTTCATCACCACGTG 6219
               |||||||||||||||||||||||  |||| ||||||||||||||||  ||
bg00180   6254 CTTGCAATATAAACTGGTAACCTCACAACTCCACACTTCATCACCATATG 6303

          6551 ----+----*----+----*----+----*----+----*----+----* 6600
meh02016  6220 AAGTAAATGAAGCTAGCTAAGCGGATGCTGTGTC.ACTAGTAACTTGCCA 6268
               ||||||||||||||||||||||||||||||| || |||||||||||||||
bg00180   6304 AAGTAAATGAAGCTAGCTAAGCGGATGCTGTATCAACTAGTAACTTGCCA 6353

          6601 ----+----*----+----*----+----*----+----*----+----* 6650
meh02016  6269 TTAAGGGTTATTTTATAGCATGAATTGAAGACTATTTATTCAAATGATAT 6318
               |||||| ||||||||||||||||||| |||||||||||||||||||||||
bg00180   6354 TTAAGGATTATTTTATAGCATGAATTTAAGACTATTTATTCAAATGATAT 6403

          6651 ----+----*----+----*----+----*----+----*----+----* 6700
meh02016  6319 TTTACTC..GTATTCATTTTGCTTTAGGTTTGTGACATGAATATTTCAGT 6366
               |||||||  ||||||| |||| ||||| ||||||||||||||||||||||
bg00180   6404 TTTACTCTTGTATTCACTTTGTTTTAGATTTGTGACATGAATATTTCAGT 6453

          6701 ----+----*----+----*----+----*----+----*----+----* 6750
meh02016  6367 GCTGCTTCATTTCGTTCTGAATTCTTGTTTCTTGCTTGTAAATGGCTTTT 6416
               ||||||| |||| |||||||||||||||||||||||||||||||||||||
bg00180   6454 GCTGCTTAATTTTGTTCTGAATTCTTGTTTCTTGCTTGTAAATGGCTTTT 6503

          6751 ----+----*----+----*----+----*----+----*----+----* 6800
meh02016  6417 TTATGGT...AATAAATTCGATGGAAATTGCTGTTTGTAAATAAAAATGC 6463
               |||||||   |||||| || ||||| ||||||||||||||||        
bg00180   6504 TTATGGTATAAATAAAGTCAATGGACATTGCTGTTTGTAAAT........ 6545

          6801 ----+---- 6809
meh02016  6464 TGCTAGAGC 6472
                        
bg00180   6546 ......... 6546